bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: kyva
           112,920 sequences; 47,500,486 total letters



Query=  Eten_1998_orf4
Length=58
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Hs20544584                                                          30.4    0.75
  At2g15580                                                           28.1    3.8


> Hs20544584
Length=165

 Score = 30.4 bits (67),  Expect = 0.75, Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query  21   PATAAAAASAIAAAAAHFYLRRRTKAIYMWKAQKKKK  57
            P  AA   + +  A +  YL  RT A YMW+  K KK
Sbjct  126  PGMAATMMAVVGQADS--YLTNRTHAAYMWRGDKGKK  160


> At2g15580
Length=204

 Score = 28.1 bits (61),  Expect = 3.8, Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 0/37 (0%)

Query  12  RQRRACSSTPATAAAAASAIAAAAAHFYLRRRTKAIY  48
           R+RR     P   ++  +++AAAA H + RR + ++Y
Sbjct  12  RRRRFHGGAPPIESSNTASVAAAAGHVWTRRPSFSLY  48



Lambda     K      H
   0.321    0.121    0.339 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 1187999082


  Database: kyva
    Posted date:  Jul 3, 2009  9:03 AM
  Number of letters in database: 47,500,486
  Number of sequences in database:  112,920



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40