bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: kyva
           112,920 sequences; 47,500,486 total letters



Query=  Eten_1973_orf5
Length=113
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  SPBC4F6.12                                                          29.3    1.9
  Hs17477796                                                          27.7    5.4
  At5g45480                                                           26.9    9.4


> SPBC4F6.12
Length=438

 Score = 29.3 bits (64),  Expect = 1.9, Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 7/43 (16%)

Query  11   FASFRLGFIPSPRGGEVSARRARGERALPSVHSFHKTETNDKY  53
            FAS +L  +P  +  ++S RR       P++HSFH    N  Y
Sbjct  175  FASKQLPTLPLQKSSKLSNRR-------PALHSFHSAPANSLY  210


> Hs17477796
Length=448

 Score = 27.7 bits (60),  Expect = 5.4, Method: Compositional matrix adjust.
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 0/35 (0%)

Query  2    QLLLHFRAHFASFRLGFIPSPRGGEVSARRARGER  36
            +L L  RA  A+ + G  P PR  +  +RR RG R
Sbjct  267  RLRLSTRAAVAAGKRGVFPEPRSPKAGSRRDRGRR  301


> At5g45480
Length=877

 Score = 26.9 bits (58),  Expect = 9.4, Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query  26   EVSARRARGERALPSVHSFHKTETNDKYIYLVLIYPVISASLVRIGKWR  74
            E+  +  +G +A  S   F K   +D  +YL+++ P + +++V IGK R
Sbjct  683  ELLYQTKKGTKANHSAREFSKI-LSDYMMYLLMMQPTLMSAVVGIGKIR  730



Lambda     K      H
   0.329    0.140    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 1185472426


  Database: kyva
    Posted date:  Jul 3, 2009  9:03 AM
  Number of letters in database: 47,500,486
  Number of sequences in database:  112,920



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40