bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: kyva
           112,920 sequences; 47,500,486 total letters



Query=  Eten_1973_orf4
Length=100
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  7292323                                                             29.3    1.8
  7295519                                                             27.3    7.0


>
Length=1381

 Score = 29.3 bits (64),  Expect = 1.8, Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 12/81 (14%)

Query  20    RRNWTGPSARRPGATGRATPLAEFGLQVGVNLRGIYLQGYWALAEAGGRRFPRAAAPGFA  79
             RRN    S   P  TG +  L   G +     R +YL     + E   ++ P  + PG  
Sbjct  1237  RRNSVHGSLEAPDVTGSSLTLGTAGSR-----RTVYL-----IDEH--QKLPDGSTPGAT  1284

Query  80    RSSSVGCSSSRSGKLRNPRDP  100
             +S SVG S S +     P +P
Sbjct  1285  QSQSVGGSGSVNAAPPTPAEP  1305


>
Length=852

 Score = 27.3 bits (59),  Expect = 7.0, Method: Compositional matrix adjust.
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 10/74 (13%)

Query  1    ESVTEPFKRSSR-RIWRSALRR---------NWTGPSARRPGATGRATPLAEFGLQVGVN  50
            E+VT   +R S  ++W+  + R         NW  P A+  G  GR+  L +  ++   N
Sbjct  677  EAVTADLQRESEEKLWQEGILRHVPVVGRVFNWWSPPAKESGIKGRSLNLTQGVVESTEN  736

Query  51   LRGIYLQGYWALAE  64
            +   ++Q   A A 
Sbjct  737  IYKYHMQMTGATAH  750



Lambda     K      H
   0.318    0.133    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 1187882580


  Database: kyva
    Posted date:  Jul 3, 2009  9:03 AM
  Number of letters in database: 47,500,486
  Number of sequences in database:  112,920



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40