bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_1902_orf2
Length=130
Score E
Sequences producing significant alignments: (Bits) Value
7296457 32.7 0.20
Hs22044561 32.0 0.31
At5g17630 31.6 0.43
Hs4507963 30.0 1.0
At5g28250 28.5 3.0
Hs15451916 28.5 3.5
Hs22043465 27.7 5.0
CE04527 27.7 5.5
Hs4758750_1 27.3 6.5
Hs5454046 26.9 9.5
Hs20545872 26.9 9.7
> 7296457
Length=2285
Score = 32.7 bits (73), Expect = 0.20, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query 81 AAPLASAAAAAAGAPSTAGDLAAERPKNAAGPSAPRAGCNVQEGEVISA 129
A+P S+ A +G P T +P N AGPS P G N + SA
Sbjct 1675 ASPAMSSLKATSGQPQTQ---EITKPNNGAGPSVPSVGQNTPTAALTSA 1720
> Hs22044561
Length=964
Score = 32.0 bits (71), Expect = 0.31, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 0/33 (0%)
Query 86 SAAAAAAGAPSTAGDLAAERPKNAAGPSAPRAG 118
S A+ G P TAG + + P++A GPS R+G
Sbjct 173 SRGASIPGTPPTAGRVVSLSPEDAPGPSLRRSG 205
> At5g17630
Length=417
Score = 31.6 bits (70), Expect = 0.43, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query 9 LPGWGGCFGARGS----LFLLLLDAPFASELSSSEEGALDEVSATAYAMVLTSKETKTGK 64
+PG+ + G+ F +LL F + S ALDE+S +++ T K
Sbjct 312 VPGYHKAIASVGTPSTFYFWVLLSGVFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVII 371
Query 65 RSVKLYRRKLRPLLAVAAPLA 85
+V ++R +RPL A+ + +A
Sbjct 372 STVLVFRNPVRPLNALGSAIA 392
> Hs4507963
Length=630
Score = 30.0 bits (66), Expect = 1.0, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query 46 VSATAYAMVLTSKETKTGKRSVKLYRRKLRPL-LAVAAPLASAAAAAAGAPSTA---GDL 101
+S ++ +LT ET +RS + + RPL +AV+ P ASAA P+ + D+
Sbjct 1 MSVSSGVQILTKPETVDRRRSAETTKEAGRPLEMAVSEPEASAAEWKQLDPAQSNLYNDV 60
Query 102 AAERPKNAAGPSAPRAGCNVQEGEVIS 128
E N A GC + ++IS
Sbjct 61 MLENYCNQAS-----MGCQAPKPDMIS 82
> At5g28250
Length=939
Score = 28.5 bits (62), Expect = 3.0, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 0/39 (0%)
Query 58 KETKTGKRSVKLYRRKLRPLLAVAAPLASAAAAAAGAPS 96
K TKTG+ +V L R++ P++ ASAAA P+
Sbjct 366 KGTKTGRNTVGLRRKQKIPVVDTRTSTASAAAGNGTKPN 404
> Hs15451916
Length=1038
Score = 28.5 bits (62), Expect = 3.5, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 9/69 (13%)
Query 68 KLYRRKLRPL--------LAVAAPLASAAAAAAGAPSTAGDLAAERPKNAAGP-SAPRAG 118
+L R+ RPL + P + A G PSTA D +P+ A P S +
Sbjct 886 RLVDRRERPLEGGRTNSNNNNSNPCSEQDVLAQGVPSTAADPGPSKPRRAQRPNSLDLSA 945
Query 119 CNVQEGEVI 127
NV +G I
Sbjct 946 TNVLDGSSI 954
> Hs22043465
Length=491
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 0/33 (0%)
Query 28 DAPFASELSSSEEGALDEVSATAYAMVLTSKET 60
D + + LS+ EG++DEV +LTSK++
Sbjct 249 DKLYGNSLSTKHEGSIDEVRLPPVQRMLTSKQS 281
> CE04527
Length=238
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 0/58 (0%)
Query 5 TGTPLPGWGGCFGARGSLFLLLLDAPFASELSSSEEGALDEVSATAYAMVLTSKETKT 62
+G GWG F L +++L S + G L VSA AY +V S +T
Sbjct 87 SGFVFSGWGDSFFVAVQLVIIILQIFLFSGQTMLSVGFLGIVSAVAYGVVSKSIPMQT 144
> Hs4758750_1
Length=1144
Score = 27.3 bits (59), Expect = 6.5, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 0/37 (0%)
Query 87 AAAAAAGAPSTAGDLAAERPKNAAGPSAPRAGCNVQE 123
AA A AG L AER + AAG S+P A + +E
Sbjct 690 AAIRAMAVLREAGRLRAERAEKAAGMSSPGAQSHPEE 726
> Hs5454046
Length=1268
Score = 26.9 bits (58), Expect = 9.5, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 0/29 (0%)
Query 85 ASAAAAAAGAPSTAGDLAAERPKNAAGPS 113
AS++ A+ G PST G A NAA PS
Sbjct 167 ASSSVASQGFPSTCGHYAMSTVSNAAYPS 195
> Hs20545872
Length=504
Score = 26.9 bits (58), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 0/33 (0%)
Query 35 LSSSEEGALDEVSATAYAMVLTSKETKTGKRSV 67
L SS+EG + V+A+A++M+L + + K + S+
Sbjct 252 LDSSQEGQEESVAASAFSMILFAAKAKKKRDSL 284
Lambda K H
0.311 0.127 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1246445644
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40