bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_0934_orf1
Length=171
Score E
Sequences producing significant alignments: (Bits) Value
At3g20080 29.6 3.0
At5g21160 29.3 4.3
At3g02890 28.9 5.1
Hs6912444 28.5 6.8
Hs11321632 28.5 6.9
Hs14042978 28.5 7.7
7296667 28.1 10.0
> At3g20080
Length=520
Score = 29.6 bits (65), Expect = 3.0, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query 106 GPPAVFSSTG-RNGTRDLF---LQADSLKNQEVDISRDGADASNNSVRALLLGR 155
GP A+ S G R DLF L ++K + VDI + SNNS+ +++GR
Sbjct 145 GPQALERSRGFRADELDLFYENLLDKAMKKESVDICVEALKLSNNSICKMIMGR 198
> At5g21160
Length=821
Score = 29.3 bits (64), Expect = 4.3, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Query 70 PQQQQQQNPETTQQQDSTSLSAAAAASGVGAAGKGDGPPAV--FSSTGRNGTRDLFLQAD 127
P ++ + ET D S + + G KG P V FSS G +R ++
Sbjct 355 PASKKSTSAETIGDGDKDSPKSITSGDNFGNPSKGSSKPTVSDFSSEGAQSSRTNNYKSG 414
Query 128 SLKNQEVDISRDGADASNNSVRALLL 153
+LK+ D R+ D SN+ LL
Sbjct 415 NLKSS-ADEKRNVEDLSNDFSNTFLL 439
> At3g02890
Length=963
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 0/64 (0%)
Query 16 ATAASLGAARHFSTPRLSTCLRMLKMKLFQSMRRRISSRDSFSRSGSQQSEKHQPQQQQQ 75
A A +G+ + PR+ST R K + R+++ SF+ S +E + Q
Sbjct 296 AVGAQIGSPKRSVLPRMSTLSRETSFKGLEKPTRKLAHYSSFNSHSSDDTESTRSTDSQL 355
Query 76 QNPE 79
Q+P+
Sbjct 356 QSPK 359
> Hs6912444
Length=466
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query 56 SFSRSGSQQSEKHQPQQQQQQNPETTQQQDSTSLSAAAAASGVGAAGKG---DGPPAVFS 112
+FSRS S+ E QQQ+ +PE Q+DST + A S G G D A++
Sbjct 407 TFSRSYSELKE----QQQRAASPEPALQEDSTHSATATEDSSQGPDSAGLADDSADALWV 462
Query 113 STGR 116
GR
Sbjct 463 RAGR 466
> Hs11321632
Length=709
Score = 28.5 bits (62), Expect = 6.9, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 6/65 (9%)
Query 57 FSRSGSQQSEKHQPQQQQQQNPETTQQQDSTSLSAAAAASGVGAAGKGDGPPAVFSSTGR 116
++ +GS S QQ +P DS SAA G G G G P + S G
Sbjct 612 WTSAGSLNSVPTNSAQQGHNSP------DSPVTSAAKGIPGFGNTGNISGAPVTYPSAGA 665
Query 117 NGTRD 121
G +
Sbjct 666 QGVNN 670
> Hs14042978
Length=1249
Score = 28.5 bits (62), Expect = 7.7, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query 6 CCCAC-MRDLEATAASLGAARHFSTPRLSTCLRMLKMKLFQSMRRR--ISSRDSFSRSGS 62
CCCAC +D + G +RHF+ P R Q + ++++ S + S
Sbjct 86 CCCACHSKDFTNNDMNQGTSRHFNYPSTPPSERNGTSSTCQDSPEKTTLAAKLSAKKQAS 145
Query 63 ---QQSEKHQPQQQQQQNPETTQQ 83
+++ Q ++++ + ETTQQ
Sbjct 146 IYRDENDDFQVEKKRIRPLETTQQ 169
> 7296667
Length=383
Score = 28.1 bits (61), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 6/43 (13%)
Query 15 EATAASLGAARHFSTPRLS----TCLRML--KMKLFQSMRRRI 51
E TA RHF+T RL+ C RML K K+F + ++RI
Sbjct 222 EGTALCRYCGRHFNTDRLAKHEEVCQRMLTTKRKIFDASKQRI 264
Lambda K H
0.316 0.127 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2526689620
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40