bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: kyva
           112,920 sequences; 47,500,486 total letters



Query=  Eten_0641_orf3
Length=89
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  At5g46560                                                           30.4    0.80
  At4g36860                                                           29.3    1.6
  7301115                                                             28.1    4.6
  ECU05g0940                                                          27.3    6.4


> At5g46560
Length=375

 Score = 30.4 bits (67),  Expect = 0.80, Method: Composition-based stats.
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)

Query  14   LEASSVSWSATL-RLVVDCGGVLITLSVHRRAIQYERCIVRRYCE  57
            L  +S+  +A L  LVV C G+L+  ++ RR IQ ++C  RR  E
Sbjct  211  LSLASMDLAAYLNHLVVLCNGILVGSAMLRRRIQRKQCFSRRVEE  255


> At4g36860
Length=542

 Score = 29.3 bits (64),  Expect = 1.6, Method: Composition-based stats.
 Identities = 9/17 (52%), Positives = 13/17 (76%), Gaps = 0/17 (0%)

Query  52   VRRYCEGIKRDGLPRCC  68
            +++YC   +RDG PRCC
Sbjct  260  MQKYCPSHERDGTPRCC  276


>
Length=1067

 Score = 28.1 bits (61),  Expect = 4.6, Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 0/34 (0%)

Query  22   SATLRLVVDCGGVLITLSVHRRAIQYERCIVRRY  55
            S TL+++ + GG+L  +S H    +  R I+RRY
Sbjct  296  SKTLKIIENAGGILRNVSSHIAVCEPYRQILRRY  329


> ECU05g0940
Length=1337

 Score = 27.3 bits (59),  Expect = 6.4, Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query  18  SVSWSATLRLVVDCGGVLITLSVHRRAIQYERCIVRRYCEGIK  60
           S  ++    LVVD GG LIT    R  ++YE   +  Y  G+K
Sbjct  18  SAQFTGIGHLVVD-GGALITNISKRYGVKYESLPLHTYMHGVK  59



Lambda     K      H
   0.327    0.139    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 1181033294


  Database: kyva
    Posted date:  Jul 3, 2009  9:03 AM
  Number of letters in database: 47,500,486
  Number of sequences in database:  112,920



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40