bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_8583_orf1 Length=107 Score E Sequences producing significant alignments: (Bits) Value 9371.ENSETEP00000010960 32.7 3.0 9685.ENSFCAP00000013237 32.3 4.4 4952.YALI0D15356g 31.6 7.7 > 9371.ENSETEP00000010960 Length=1179 Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query 13 ELNSKKKPKRNTKLKSQRSCRRSKSRQRFQKRRRRKRRKKAKNATKS-SLELI 64 ELN + P R LK Q C R F R R +A N +KS SLE I Sbjct 327 ELNHTESPGREPNLKGQNQCERFFPPNIFDGRNESLRENEALNTSKSLSLESI 379 > 9685.ENSFCAP00000013237 Length=1319 Score = 32.3 bits (72), Expect = 4.4, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 0/75 (0%) Query 9 KTNPELNSKKKPKRNTKLKSQRSCRRSKSRQRFQKRRRRKRRKKAKNATKSSLELIIFTF 68 + P+L K + L +R+ R S +KR R K K+A+ ++L L+I T Sbjct 816 RGTPQLTEGATAKAISDLAVRRARHRLLSGDSAEKRTTRPINKVIKSASATTLSLLIPTE 875 Query 69 CTCACLCTYMYYHCE 83 TC+ L + M H + Sbjct 876 HTCSPLASPMSPHSQ 890 > 4952.YALI0D15356g Length=1098 Score = 31.6 bits (70), Expect = 7.7, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 5/62 (8%) Query 5 KSKIKTNPELNSKKKPKRNT---KLKSQRSCRRSKSRQRFQKRRRRKR--RKKAKNATKS 59 K+K+ T + NSKKK +N + K++ R +K ++ Q+++ +KKAKN KS Sbjct 16 KAKLDTANDKNSKKKDAKNAVKAENKAKNDAREAKKKEHEQRKKEEAEAMKKKAKNFNKS 75 Query 60 SL 61 Sbjct 76 KF 77 Lambda K H 0.320 0.127 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22528463995 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40