bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Eten_5922_orf1
Length=99
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5270.cox1                                                           33.1    2.8


> 5270.cox1
Length=528

 Score = 33.1 bits (74),  Expect = 2.8, Method: Composition-based stats.
 Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 7/67 (10%)

Query  8    FQAVASLGLFFYFFFNFFFFFNYRVNLIQSLSFHERIYLIEFCFLFIQAGVSLQFFP-YF  66
            F  V S+G  F  F  F+F+       I   +F+E +  I F  LF+  GV+L FFP +F
Sbjct  376  FHYVLSMGAVFALFGGFYFW----TPKIIGKTFNENLGRIHFWTLFV--GVNLTFFPQHF  429

Query  67   LNFGGFP  73
            L  GG P
Sbjct  430  LGLGGMP  436



Lambda     K      H
   0.342    0.155    0.514 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 23144316443


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40