bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5218_orf3 Length=92 Score E Sequences producing significant alignments: (Bits) Value 8364.ENSXETP00000015760 31.2 8.8 > 8364.ENSXETP00000015760 Length=252 Score = 31.2 bits (69), Expect = 8.8, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%) Query 15 LLGVTDGKPHLTLPWNNQTRLLCVAHDGVEWFLVDAETLRPVCLGIYETKYICQNVHINV 74 LLG+T KP + WN ++ + D +E ++ + T C G ++KY C V +NV Sbjct 74 LLGITILKPFMLSVWNEESNCTIIQADIMEDWVDCSFTCGVDCHG--QSKYPCLQVLVNV 131 Query 75 PN 76 N Sbjct 132 SN 133 Lambda K H 0.321 0.140 0.451 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22844715270 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40