bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_4023_orf2 Length=170 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL3P4.13 43.5 0.002 5518.FG05321.1 34.7 1.2 382245.ASA_2128 32.0 8.2 > 5833.MAL3P4.13 Length=609 Score = 43.5 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 58/145 (40%), Gaps = 35/145 (24%) Query 35 WKGLGAFVEGQQQQQAWALLLQCEQQVSSKCKAAAEAAAEAAAAAAAGKDPNKGIDWAFW 94 W+ L F+ W ++++SK A E GK +K IDW W Sbjct 24 WQDLSFFLTNDIDTSHW-------REMTSKINEA-----ENLIKMEEGK-ASKSIDWVDW 70 Query 95 ERSIAHKDIVNCLRSHYEQQESAYGRLLGSSA------------------VAASQQISSK 136 I++K++++C+++ Y+ Q L G S++IS K Sbjct 71 NEKISNKELLSCMKNFYDNQMKMLQELGGEKEGNLKEGEEEKIFEDALKNCKESEEISKK 130 Query 137 ----GAAALWLSCRNPPLSALSTND 157 GA LW++ NP +S + N+ Sbjct 131 LLVDGAKTLWINFHNPNVSNVDNNE 155 > 5518.FG05321.1 Length=1856 Score = 34.7 bits (78), Expect = 1.2, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 38/96 (39%), Gaps = 12/96 (12%) Query 56 QCEQQVSSKCKAAAEAAAEAAAAAAAGKDPNKGID-----------WAFWERSIAHKDIV 104 Q E+ VSS E EA A A K+ G+D F ER+ +I Sbjct 1708 QSEKVVSSTKAKETEQVMEALALKVANKNSQVGVDVEDISAVNIDNETFVERNFTANEIS 1767 Query 105 NCLRSHYEQQESAYGRLLGSSAVAASQQISSKGAAA 140 C R Q S GR AV S ++S+GA A Sbjct 1768 YC-RQAPSPQSSFAGRWSAKEAVFKSLGVASQGAGA 1802 > 382245.ASA_2128 Length=235 Score = 32.0 bits (71), Expect = 8.2, Method: Compositional matrix adjust. Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 0/35 (0%) Query 67 AAAEAAAEAAAAAAAGKDPNKGIDWAFWERSIAHK 101 A + E+ A+A G D K W FWE + AHK Sbjct 120 APKQKLTESIASAFTGLDEQKNDAWIFWEHTTAHK 154 Lambda K H 0.321 0.130 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 31617132627 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40