bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3629_orf7 Length=120 Score E Sequences producing significant alignments: (Bits) Value 9544.ENSMMUP00000032935 34.3 1.1 31033.SINFRUP00000128712 33.5 2.2 9365.ENSEEUP00000005706 33.1 2.3 9606.ENSP00000356322 31.2 9.5 > 9544.ENSMMUP00000032935 Length=406 Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 5/53 (9%) Query 27 HMCIWHVYAG--VSGLHDSC---KRMCTYAWETEKHRRVNTSRQVPCSCAGAC 74 HM +W Y V GL+D + + Y ET + +++NT VP S +G+C Sbjct 43 HMFVWGGYKSNQVRGLYDFYLPREELWIYNMETGRWKKINTEGDVPPSMSGSC 95 > 31033.SINFRUP00000128712 Length=2988 Score = 33.5 bits (75), Expect = 2.2, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 15/89 (16%) Query 21 HECSNTHMCIWHVYAGVSGLHDSC--KRMCTYAWETEKHRRVNT---SRQVPCSCAGACD 75 H CS T +W V+ SG +D + MC +A +T + +N + + +G C+ Sbjct 1653 HSCSQTRAGVWCVFVEASGQNDGVLKRLMCVFALKTPEGVLINILMENSHLSLQLSGGCE 1712 Query 76 RTDK-HAYTRTCWALALKGSTSRHLSSCT 103 T H +T C S LS CT Sbjct 1713 LTVVLHDFTAGC---------STELSVCT 1732 > 9365.ENSEEUP00000005706 Length=406 Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 5/53 (9%) Query 27 HMCIWHVYAG--VSGLHDSC---KRMCTYAWETEKHRRVNTSRQVPCSCAGAC 74 HM +W Y V GL+D + + Y ET + +++NT VP S +G+C Sbjct 43 HMFVWGGYKSNQVRGLYDFYLPREELWIYDMETGRWKKMNTEGDVPPSMSGSC 95 > 9606.ENSP00000356322 Length=895 Score = 31.2 bits (69), Expect = 9.5, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 8/82 (9%) Query 42 DSCKRMCTYAWETEKHRRVNTSRQ-VPC-SCAGACDRTDKH-AYTRTCWALALKGSTSRH 98 D C + E+H+R ++ + C +C RTD+ + RTC + +KG+TS Sbjct 320 DQCSMKFIQKYHMERHKRTHSGEKPYKCDTCQQYFSRTDRLLKHRRTCGEVIVKGATSAE 379 Query 99 LSSCTHAKHQHLYGTVTAVASQ 120 S H +L AV SQ Sbjct 380 PGSSNHTNMGNL-----AVLSQ 396 Lambda K H 0.324 0.129 0.452 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23080484097 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40