bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3224_orf2 Length=132 Score E Sequences producing significant alignments: (Bits) Value 246197.MXAN_2876 33.9 1.6 69293.ENSGACP00000012882 32.3 4.7 31033.SINFRUP00000180964 32.0 5.6 8090.ENSORLP00000016175 31.2 8.9 > 246197.MXAN_2876 Length=1201 Score = 33.9 bits (76), Expect = 1.6, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 1/83 (1%) Query 2 LPPAVNFATQVATSEEIRQLMRQWTGMMGELFRGPDTRESSLPFYWKLPECVLTVDFAAA 61 +P A + QVAT ++R T + + SS P+YW+ + +A Sbjct 935 VPSAATYEVQVATDSAFTNVVRSATALTASAWTVTPALSSSTPYYWR-ARAADSCGTSAY 993 Query 62 ADAAAFDAAKVELAYSAEYNVLL 84 + A +F + +A YN L Sbjct 994 STARSFTTTNICTPVAATYNATL 1016 > 69293.ENSGACP00000012882 Length=923 Score = 32.3 bits (72), Expect = 4.7, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 11/98 (11%) Query 27 GMMGELFRGPDTR---ESSLPFYWKLPECVLTVDFAAAADAAAFDAAKVELAYSAE---- 79 GM L+ G R + LP W EC+L F A+D AF E+ + Sbjct 796 GMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEMLSVCQEQPY 855 Query 80 YNVLLLQFVEEAAEWFQVLKRPTPRSQLLHLPVECTVG 117 N+ Q ++ A E+F R R L+ P C G Sbjct 856 SNLTDEQVIDNAGEFF----RDQGRQVYLNKPAVCPQG 889 > 31033.SINFRUP00000180964 Length=864 Score = 32.0 bits (71), Expect = 5.6, Method: Composition-based stats. Identities = 28/98 (28%), Positives = 38/98 (38%), Gaps = 11/98 (11%) Query 27 GMMGELFRGPDTR---ESSLPFYWKLPECVLTVDFAAAADAAAFDAAKVELAYSAE---- 79 GM L+ G R + LP W EC+L F A+D AF E+ + Sbjct 737 GMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEMLSVCQEQPY 796 Query 80 YNVLLLQFVEEAAEWFQVLKRPTPRSQLLHLPVECTVG 117 N+ Q ++ A E+F R R L P C G Sbjct 797 SNLTDEQVIDNAGEFF----RDQSRQVYLGRPAVCPQG 830 > 8090.ENSORLP00000016175 Length=933 Score = 31.2 bits (69), Expect = 8.9, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 41/106 (38%), Gaps = 11/106 (10%) Query 19 RQLMRQWTGMMGELFRGPDTR---ESSLPFYWKLPECVLTVDFAAAADAAAFDAAKVELA 75 RQ+ GM L+ G R + LP W EC+L F A+D AF E+ Sbjct 798 RQIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEML 857 Query 76 YSAE----YNVLLLQFVEEAAEWFQVLKRPTPRSQLLHLPVECTVG 117 + N+ Q ++ A E+F R R L P C G Sbjct 858 SVCQEQPYSNLTDEQVIDNAGEFF----RDQGRQVYLGKPAVCPQG 899 Lambda K H 0.323 0.134 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22851147482 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40