bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1973_orf6 Length=119 Score E Sequences producing significant alignments: (Bits) Value 9544.ENSMMUP00000021863 38.5 0.066 9606.ENSP00000345464 38.1 0.071 9598.ENSPTRP00000030321 38.1 0.071 246196.MSMEG_6877 34.7 0.77 331112.EcHS_A2094 32.7 2.8 397945.Aave_3421 32.3 4.2 31033.SINFRUP00000142844 31.2 8.5 > 9544.ENSMMUP00000021863 Length=395 Score = 38.5 bits (88), Expect = 0.066, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 4/92 (4%) Query 7 CKVIGRWLRRAGGAFRARRRRASLVQVLSAAAAAEAESCGILAIRRRCCAELLRNANSSN 66 CKV + G + R R S V+ A A LA+ C R ++S+ Sbjct 26 CKVC---FEKFGHRQQRRPRNLSCGHVVCLACVAALAHPRTLALECPFCRRACRGCDTSD 82 Query 67 CFCIFAHISPALGSVLSPAPAAGRSAPAAPAG 98 C + H+ LGS L +PAA R+AP+AP Sbjct 83 CLPVL-HLIELLGSALRQSPAAHRAAPSAPGA 113 > 9606.ENSP00000345464 Length=395 Score = 38.1 bits (87), Expect = 0.071, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 4/92 (4%) Query 7 CKVIGRWLRRAGGAFRARRRRASLVQVLSAAAAAEAESCGILAIRRRCCAELLRNANSSN 66 CKV + G + R R S V+ A A LA+ C R ++S+ Sbjct 26 CKVC---FEKFGHRQQRRPRNLSCGHVVCLACVAALAHPRTLALECPFCRRACRGCDTSD 82 Query 67 CFCIFAHISPALGSVLSPAPAAGRSAPAAPAG 98 C + H+ LGS L +PAA R+AP+AP Sbjct 83 CLPVL-HLIELLGSALRQSPAAHRAAPSAPGA 113 > 9598.ENSPTRP00000030321 Length=395 Score = 38.1 bits (87), Expect = 0.071, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 4/92 (4%) Query 7 CKVIGRWLRRAGGAFRARRRRASLVQVLSAAAAAEAESCGILAIRRRCCAELLRNANSSN 66 CKV + G + R R S V+ A A LA+ C R ++S+ Sbjct 26 CKVC---FEKFGHRQQRRPRNLSCGHVVCLACVAALAHPRTLALECPFCRRACRGCDTSD 82 Query 67 CFCIFAHISPALGSVLSPAPAAGRSAPAAPAG 98 C + H+ LGS L +PAA R+AP+AP Sbjct 83 CLPVL-HLIELLGSALRQSPAAHRAAPSAPGA 113 > 246196.MSMEG_6877 Length=259 Score = 34.7 bits (78), Expect = 0.77, Method: Compositional matrix adjust. Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 6/100 (6%) Query 20 AFRARRRRASLVQVLSAAAAAEAESCGILAIRRRCCAELLRNANSSNCFCIFAHISPALG 79 A RR+ + Q + AA E G+ ++ + +L F + P + Sbjct 120 ALFGRRQWVEMEQQTAERAAVLLEELGLTDVKDQRLEDLTAGQTKLVDFARLLMVQPRM- 178 Query 80 SVLSPAPAAGRSAPAAPAGKGRFLQSIPSTKPKQMTNIFI 119 VL PAAG APAG GR + + S + + +T + I Sbjct 179 -VLLDEPAAG----VAPAGIGRLTEQVTSLRDRGITLLII 213 > 331112.EcHS_A2094 Length=708 Score = 32.7 bits (73), Expect = 2.8, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Query 29 SLVQVLSAAAAAEAESCGILAIRRRCCAELLRNANSSNCFCIFAHISPALGSVLSPAPAA 88 S V++ A ES G+ I CC +L++ A N F FAH+ P +L P A Sbjct 62 STVEIARGPMLAATES-GVHIITVMCCTQLMKTALLENLFGYFAHLDPCPILLLQPKEEA 120 Query 89 G 89 Sbjct 121 A 121 > 397945.Aave_3421 Length=788 Score = 32.3 bits (72), Expect = 4.2, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 4/46 (8%) Query 6 ICKVIGRWLRRAGGAFRARRRRASLVQVLSAAAAAEAESCGILAIR 51 + K + RW R A GAFR+RR+ L++V A +S G L IR Sbjct 529 VAKAVVRW-REANGAFRSRRQ---LMEVAGLGAKTFEQSAGFLRIR 570 > 31033.SINFRUP00000142844 Length=1703 Score = 31.2 bits (69), Expect = 8.5, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 0/48 (0%) Query 54 CCAELLRNANSSNCFCIFAHISPALGSVLSPAPAAGRSAPAAPAGKGR 101 CCA +L A + C C+ + AL + + A+ P AP G+ Sbjct 1278 CCASVLLLALAKGCCCVSQSLCKALQELRAEMVASAEEKPPAPTAPGK 1325 Lambda K H 0.326 0.135 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22381075488 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40