bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1902_orf1 Length=159 Score E Sequences producing significant alignments: (Bits) Value 405948.SACE_3089 34.7 0.95 10141.ENSCPOP00000009683 33.1 2.9 296591.Bpro_0154 32.3 5.2 6239.T08A11.2 32.0 6.0 9615.ENSCAFP00000014769 31.6 8.0 > 405948.SACE_3089 Length=266 Score = 34.7 bits (78), Expect = 0.95, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 38/94 (40%), Gaps = 14/94 (14%) Query 27 GRSAARSPAVEGAPAAAAAALASGAATARRGRSFRRYSFTLLFPVF--------VSLLVS 78 GRS AR AVE A+ +GA TAR R Y L PVF V+ L Sbjct 32 GRSLARKGAVE------DMAVVAGAVTARVRDGSRTYDVGLHLPVFGDDEWAAAVTALAG 85 Query 79 TIAYAVAETSSNAPSSDDDSSEANGASSKSRNNE 112 + +AVA P DD+ G R +E Sbjct 86 RLRHAVALLEGRLPEDVDDTLGEAGVPLFPRRDE 119 > 10141.ENSCPOP00000009683 Length=2296 Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Query 36 VEGAPAAAAAALASGAATARRGRSFRRYSFTLLFPVFVSLLVSTIAYAVAETSSNAPSS 94 +E P AA LA G T RRG FRR S + P + L S V + NAP S Sbjct 652 METEPDAAPGGLAHGEETPRRG--FRRVSLDIQSPPNIGLRRSGQVEGVRQMHQNAPRS 708 > 296591.Bpro_0154 Length=845 Score = 32.3 bits (72), Expect = 5.2, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 30/77 (38%), Gaps = 17/77 (22%) Query 1 FHAADMTSPSCTLHPALGALGPAAFLGRSAARSPAVEGA-----PAAAAAALASGAATAR 55 + P HP LG LG A R A+EGA P + A + SGA+ Sbjct 128 LYVVKYIEPEADNHPLLG-----EDLGADAVRREAIEGALATGMPTLSKAVMLSGASRQE 182 Query 56 RGRSFRRYSFTLLFPVF 72 RG F L PVF Sbjct 183 RG-------FVYLLPVF 192 > 6239.T08A11.2 Length=1322 Score = 32.0 bits (71), Expect = 6.0, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 0/56 (0%) Query 94 SDDDSSEANGASSKSRNNEPLAPKQPPQPGSGVPVPSVFQVPSENVPRPVLLPTRA 149 SDD E ++SK R+ L P Q P + P+ S Q PS P P A Sbjct 304 SDDVKIEDTPSASKRRSRWDLTPSQTPNVAAATPLHSGLQTPSFTPSHPSQTPIGA 359 > 9615.ENSCAFP00000014769 Length=2055 Score = 31.6 bits (70), Expect = 8.0, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 0/50 (0%) Query 45 AALASGAATARRGRSFRRYSFTLLFPVFVSLLVSTIAYAVAETSSNAPSS 94 + L SG T RRG+ FRR S + P + L S V + NAP S Sbjct 402 SGLPSGEETPRRGKIFRRLSLDIQSPPNIGLRRSGQVEGVRQMHQNAPRS 451 Lambda K H 0.312 0.125 0.359 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 26246233818 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40