bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1711_orf1
Length=374
Score E
Sequences producing significant alignments: (Bits) Value
170187.SP_0664 35.4 3.3
167555.NATL1_00841 34.7 5.0
8364.ENSXETP00000017149 34.3 7.0
> 170187.SP_0664
Length=1881
Score = 35.4 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 52/138 (37%), Gaps = 10/138 (7%)
Query 198 ERPEISHDVEYAPLPQTADEPEQAHPTSGEDSEGWHEELPSLPVSPIPAAFGKDTGDGTV 257
++P VE A P E E+A P E EE ++ +P + T D
Sbjct 245 DKPAEESKVEQAGEPVAPREDEKA-PVEPEKQPEAPEEEKAVEETPKQE---ESTPDTKA 300
Query 258 IARVSSKEEREDAPLREDRAPLVGVEKNTESAGETSI--TSEESASSNDE----ADIPPP 311
V KEE + + + + VEK TE E + E A DE A + P
Sbjct 301 EETVEPKEETVNQSIEQPKVETPAVEKQTEPTEEPKVEQAGEPVAPREDEQAPTAPVEPE 360
Query 312 ALPDVPPVEAAPAEERDP 329
P+VP E A E P
Sbjct 361 KQPEVPEEEKAVEETPKP 378
> 167555.NATL1_00841
Length=1584
Score = 34.7 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 44/176 (25%), Positives = 70/176 (39%), Gaps = 22/176 (12%)
Query 195 PHKERPEISHDVEYAPLPQTADEPEQAHPTSGEDS----EGWHEELPSLPVSPIPAAFGK 250
P ++ P + + P A + +G+DS EG E+ PSL P
Sbjct 89 PTEDAPSLGPKGDEPPTGDVAPDQSGDPAPTGDDSSPVDEGPTEDAPSLG----PKGDEP 144
Query 251 DTGDGTVIARVSSKEEREDAPLREDRAPLVGVEKNTESAGETSITSEESASSN---DEAD 307
TGD V+ + + AP +D +P+ E TE A +E + + D++
Sbjct 145 PTGD------VAPDQSGDPAPTGDDSSPVD--EGPTEDAPSLGPKGDEPPTGDVAPDQSG 196
Query 308 IPPPALPDVPPVEAAPAEERDPLKDLEDELAALEVFINEGG---PTTREPGSPPAD 360
P P D PV+ P E+ L DE +V ++ G PT +P +D
Sbjct 197 DPAPTGDDSSPVDEGPTEDAPSLGPKGDEPPTGDVAPDQSGDPAPTGDAATAPVSD 252
> 8364.ENSXETP00000017149
Length=371
Score = 34.3 bits (77), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 12/182 (6%)
Query 166 GLVAVAVVASHVRLIRATLRKHQAYRSVVPHKERPEISHDVEYAPLPQTADEPEQAHPTS 225
G VA V+ S + R H+A +VP + P ISH + + +P+T H +
Sbjct 132 GRVAKEVMESSAMIKRDPPEIHRA--GMVPSRSCPSISHGLRLSSVPRTRRR--AVHISI 187
Query 226 GEDSEGWHEELPSLPV--SPIPAAFGKDTGDGTVIARVSSKEEREDAPLREDRAPL---V 280
E E + S P+ S AF TVI+ + P L +
Sbjct 188 MEGLEALRDSAHSTPIRSSDHMDAFSPHASQETVISDEAYTPSCSILPTPVSEPSLELTI 247
Query 281 GVEKNTESAGETSITSEESASSNDEADIPPPALPDV---PPVEAAPAEERDPLKDLEDEL 337
G + N S + SE +++ +A+IPPPALP + PV++ P + L+ + L
Sbjct 248 GQQMNGASCSPQNEDSEVASTPVSDAEIPPPALPGLEGASPVDSEPEQANKFLQSVFRLL 307
Query 338 AA 339
A
Sbjct 308 AV 309
Lambda K H
0.314 0.132 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 144601168804
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40