bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1315_orf1
Length=228
Score E
Sequences producing significant alignments: (Bits) Value
243090.RB9867 36.6 0.69
196162.Noca_0407 35.8 1.0
4924.PICST_70308 33.9 3.6
3702.AT4G34920.1 33.5 5.0
8090.ENSORLP00000023187 33.1 7.8
> 243090.RB9867
Length=209
Score = 36.6 bits (83), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 11/121 (9%)
Query 45 VRLWRDERVADPLSGWFTEVPWRLFEDAELL--KSLANKKTIGTLSAAEA----EALNVH 98
VR W DE +A+P SGW V + + EL + +A ++ AE + LN
Sbjct 29 VRRWHDEPMANPYSGWLRWVCQQHAFNFELWHEEDVARNPSVTDARIAEVKRSIDRLN-Q 87
Query 99 SRTDLVEGLFKPVLQFLRKSRTEVAVVVFSAVNGNTHTKRNAIVKGSELGESLAHAEKQL 158
R D +E L + + +++S +VVV NT T +AI + S + L H +QL
Sbjct 88 QRNDWIEKLDDAITESIQQS----SVVVAEDAPINTETPGSAIDRLSIMSLRLFHYAEQL 143
Query 159 E 159
+
Sbjct 144 Q 144
> 196162.Noca_0407
Length=409
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 16/101 (15%)
Query 30 LGVVDQLKDGIR---------LIDVRLWRDERVADPLSGWFTEVPWRLFEDAELLKSLAN 80
LG+V Q DG +D R+WRD+ + D L W E W LF A++ +
Sbjct 296 LGLVQQTWDGFEGEFRRRWPSRLDARVWRDDTLQDLLREWENEA-W-LFAAAKM-----S 348
Query 81 KKTIGTLSAAEAEALNVHSRTDLVEGLFKPVLQFLRKSRTE 121
++ +G A+ E L R G+ + +R S +E
Sbjct 349 RRIVGAAKTADIETLPEELREGAARGVLRAARTLVRHSTSE 389
> 4924.PICST_70308
Length=297
Score = 33.9 bits (76), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query 2 KLALPATYMSTLTDVNVPKYAGKVGSQNLGVVDQLKDGIRLIDVRLWR 49
KL++P T+ S +P V Q V DQLK G+R +D+R R
Sbjct 19 KLSIPGTHNSAACHTALPS----VQCQGKSVTDQLKHGVRFLDIRAGR 62
> 3702.AT4G34920.1
Length=318
Score = 33.5 bits (75), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query 2 KLALPATYMSTLTDVNVPKYAGKVG-SQNLGVVDQLKDGIRLIDVRLWRDERVA 54
K+ P T+ S D+ +P + + Q+L + +QL G R++D+R+ D ++
Sbjct 59 KIVWPGTHDSATNDIGIPLISRPLAECQSLSIYEQLVLGTRVLDIRVQEDRQIC 112
> 8090.ENSORLP00000023187
Length=1786
Score = 33.1 bits (74), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 0/28 (0%)
Query 175 VEPQNQPAAPSVVRVGPHSAYYSPLLDS 202
EP++ PAAP+V PHS+++S LL S
Sbjct 664 TEPEHPPAAPTVTVQNPHSSFHSVLLKS 691
Lambda K H
0.316 0.133 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 63182849288
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40