bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Eten_0641_orf2
Length=94
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  3702.AT3G09080.1                                                    33.5    1.9


> 3702.AT3G09080.1
Length=1026

 Score = 33.5 bits (75),  Expect = 1.9, Method: Composition-based stats.
 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 12/73 (16%)

Query  27   AGRVACFLFLCTGVSFTSWLQDATFAGHGSDQLSGDCVLANTSIMVDVANLNCILAWQLS  86
            + R  CF+   TG      +  AT  GHG + ++G   L +   ++ VA+  CI  W+L 
Sbjct  590  SNRTICFVDFVTG----ELVAQAT--GHG-EAVTGVIFLPDCKHIISVASDGCIFVWKLP  642

Query  87   IRM-----RAANE  94
            +RM     RA NE
Sbjct  643  LRMATRIIRAVNE  655



Lambda     K      H
   0.330    0.138    0.449 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22695718710


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40