bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_8590_orf1
Length=144
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_062690 ribosomal protein L27, putative ; K02901 lar... 147 2e-35
pfa:PF14_0579 60S ribosomal protein L27, putative; K02901 larg... 127 1e-29
tpv:TP02_0078 60S ribosomal protein L27e; K02901 large subunit... 120 2e-27
bbo:BBOV_III010680 17.m07920; ribosomal L27e protein family pr... 110 1e-24
cpv:cgd1_3000 60S ribosomal protein L27 ; K02901 large subunit... 97.1 2e-20
cel:C53H9.1 rpl-27; Ribosomal Protein, Large subunit family me... 88.6 6e-18
ath:AT3G22230 60S ribosomal protein L27 (RPL27B); K02901 large... 88.6 6e-18
ath:AT4G15000 60S ribosomal protein L27 (RPL27C); K02901 large... 87.0 2e-17
sce:YHR010W RPL27A, RPL27; L27A; K02901 large subunit ribosoma... 86.3 3e-17
ath:AT2G32220 60S ribosomal protein L27 (RPL27A); K02901 large... 85.9 4e-17
xla:380115 rpl27, MGC68687; ribosomal protein L27 (EC:3.6.5.3)... 85.1 6e-17
dre:325618 rpl27, fc93a08, wu:fc93a08, zgc:56171; ribosomal pr... 85.1 7e-17
sce:YDR471W RPL27B; L27B; K02901 large subunit ribosomal prote... 83.6 2e-16
mmu:19942 Rpl27, MGC103134; ribosomal protein L27 (EC:3.6.5.3)... 82.4 4e-16
mmu:100039431 Gm11518; 60S ribosomal protein L27; K02901 large... 82.4 4e-16
hsa:6155 RPL27; ribosomal protein L27; K02901 large subunit ri... 82.4 4e-16
mmu:622673 Gm6341, EG622673; predicted pseudogene 6341 80.5
mmu:100504769 60S ribosomal protein L27-like 76.6 3e-14
mmu:223745 Gm4825, EG223745; predicted pseudogene 4825 69.7
pfa:MAL7P1.56 VAR; erythrocyte membrane protein 1, PfEMP1; K13... 37.4 0.015
pfa:PFA_0765c VAR; erythrocyte membrane protein 1, PfEMP1; K13... 35.0 0.079
pfa:PFB1055c erythrocyte membrane protein 1, PfEMP1; K13850 er... 34.7 0.100
sce:YML010W SPT5; Protein involved in regulating Pol I and Pol... 32.3 0.53
pfa:PFC1120c (3D7-varT3-2); var (3D7-varT3-2) 31.2 1.2
pfa:MAL7P1.55 VAR; erythrocyte membrane protein 1, PfEMP1; K13... 31.2 1.2
pfa:PFL2665c VAR; erythrocyte membrane protein 1, PfEMP1; K138... 30.8 1.6
pfa:PFC0005w VAR; erythrocyte membrane protein 1, PfEMP1; K138... 30.0 2.6
pfa:MAL13P1.1 VAR; erythrocyte membrane protein 1, PfEMP1; K13... 29.3 4.1
dre:553755 atp5a1, zgc:154103; ATP synthase, H+ transporting, ... 29.3 4.4
pfa:PF08_0140 VAR; erythrocyte membrane protein 1, PfEMP1; K13... 28.5 6.8
tgo:TGME49_055390 hypothetical protein 28.5 6.9
xla:444819 rpl6, MGC84358; ribosomal protein L6; K02934 large ... 28.5 7.5
pfa:PF10_0001 erythrocyte membrane protein 1, PfEMP1; K13850 e... 28.5 7.7
mmu:620213 Gm6136, EG620213; predicted pseudogene 6136 28.1
mmu:19988 Rpl6, MGC117949, Taxreb107; ribosomal protein L6; K0... 28.1 9.5
> tgo:TGME49_062690 ribosomal protein L27, putative ; K02901 large
subunit ribosomal protein L27e
Length=146
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/99 (67%), Positives = 83/99 (83%), Gaps = 0/99 (0%)
Query 42 RVLKPGRVVVVLNGRMAGKKGVVVSTSEGTKERHFCYCLVAGIEKAPLRVSKRMSTTKVQ 101
++LK GRVVVVLNGR AGKKGVVV+T EG+KER F +CLVAGIEKAPL+V K+M K++
Sbjct 3 KLLKSGRVVVVLNGRHAGKKGVVVNTWEGSKERQFAFCLVAGIEKAPLKVHKKMPAKKIE 62
Query 102 KRMRPKAFIRYVNVRHLMPTRYTVSNDFDVKALAPEASL 140
KRMR K F++Y+NV HLMPTRYTVS+D DVK + PE ++
Sbjct 63 KRMRVKPFLKYINVNHLMPTRYTVSSDMDVKTMVPEDAM 101
> pfa:PF14_0579 60S ribosomal protein L27, putative; K02901 large
subunit ribosomal protein L27e
Length=146
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 81/100 (81%), Gaps = 1/100 (1%)
Query 42 RVLKPGRVVVVLNGRMAGKKGVVVSTSEG-TKERHFCYCLVAGIEKAPLRVSKRMSTTKV 100
++LKPG+V+++LNGR AGKK V+V+T EG T+ER + YCLVAGIEK PL+V+K M+ K+
Sbjct 3 KLLKPGKVIIILNGRRAGKKAVIVNTYEGQTRERPYSYCLVAGIEKHPLKVNKSMTKKKI 62
Query 101 QKRMRPKAFIRYVNVRHLMPTRYTVSNDFDVKALAPEASL 140
KR + KAFI+ +NV H++PTRY V+NDFD+K+LA + L
Sbjct 63 VKRSKVKAFIKCINVNHILPTRYQVANDFDIKSLASDDVL 102
> tpv:TP02_0078 60S ribosomal protein L27e; K02901 large subunit
ribosomal protein L27e
Length=148
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 82/104 (78%), Gaps = 1/104 (0%)
Query 42 RVLKPGRVVVVLNGRMAGKKGVVVSTSEGT-KERHFCYCLVAGIEKAPLRVSKRMSTTKV 100
++LKPGRVV++L+GR AG K VVV T+E + K+R + CLVAG+EKAP++V+K+MS+ K+
Sbjct 3 KLLKPGRVVILLSGRRAGCKAVVVQTNESSSKKRPYLNCLVAGVEKAPMKVTKKMSSKKI 62
Query 101 QKRMRPKAFIRYVNVRHLMPTRYTVSNDFDVKALAPEASLEDSA 144
+KR++ KAF++YVNV HLMPTRY V+ D K+L + +E+ +
Sbjct 63 EKRLKLKAFVKYVNVNHLMPTRYMVTTTLDPKSLVSDEQMENKS 106
> bbo:BBOV_III010680 17.m07920; ribosomal L27e protein family
protein; K02901 large subunit ribosomal protein L27e
Length=146
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
Query 42 RVLKPGRVVVVLNGRMAGKKGVVVSTSEG-TKERHFCYCLVAGIEKAPLRVSKRMSTTKV 100
+++KPGRVV+VL GR AG+KG++V +E +K R + CL+AGI++ P +V+++MS ++
Sbjct 3 KLMKPGRVVIVLTGRRAGRKGIIVQCNENVSKRRPYANCLIAGIDRYPSKVTRKMSKEQI 62
Query 101 QKRMRPKAFIRYVNVRHLMPTRYTVSNDFDVKALAPEASLE 141
+KR+R K F++YVNV HLMPTRY V+ D KAL ++ +E
Sbjct 63 KKRLRIKPFVKYVNVNHLMPTRYVVTGRLDPKALVTDSQME 103
> cpv:cgd1_3000 60S ribosomal protein L27 ; K02901 large subunit
ribosomal protein L27e
Length=162
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 78/103 (75%), Gaps = 2/103 (1%)
Query 42 RVLKPGRVVVVLNGRMAGKKGVVVSTSE-GTKERHFCYCLVAGIEKAPLRVSKRMSTTKV 100
+++K GRVVV+LNGR AGKK VVV+T E GTK+R F + LVAG+EKAPL+V KR+S K+
Sbjct 20 KLMKQGRVVVLLNGRYAGKKAVVVNTFESGTKDRPFPFVLVAGVEKAPLKVHKRLSKEKL 79
Query 101 QKRMRPKAFIRYVNVRHLMPTRYTVSNDFDVKALAPEASLEDS 143
+K+ K F++ +N+ H+MPTRY VS DFD+K L ++++
Sbjct 80 KKKSTIKPFLKSINMNHVMPTRYVVS-DFDIKPLLQGIDMQEA 121
> cel:C53H9.1 rpl-27; Ribosomal Protein, Large subunit family
member (rpl-27); K02901 large subunit ribosomal protein L27e
Length=136
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
Query 42 RVLKPGRVVVVLNGRMAGKKGVVV-STSEGTKERHFCYCLVAGIEKAPLRVSKRMSTTKV 100
+++KPG+VV+VL G+ AG+K VVV EG +R + + ++AGI++ PL+V+K M K+
Sbjct 3 KIMKPGKVVLVLRGKYAGRKAVVVKQQDEGVSDRTYPHAIIAGIDRYPLKVTKDMGKKKI 62
Query 101 QKRMRPKAFIRYVNVRHLMPTRYTVSNDFDVKALAPEA 138
+KR + K F++ V+ HL+PTRY+V FD + EA
Sbjct 63 EKRNKLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEA 100
> ath:AT3G22230 60S ribosomal protein L27 (RPL27B); K02901 large
subunit ribosomal protein L27e
Length=135
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 68/101 (67%), Gaps = 3/101 (2%)
Query 42 RVLKPGRVVVVLNGRMAGKKGVVV-STSEGTKERHFCYCLVAGIEKAPLRVSKRMSTTKV 100
+ LK + V++L GR AGKK V++ S +GT +R + +CLVAG++K P +V ++ S K
Sbjct 3 KFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAKKT 62
Query 101 QKRMRPKAFIRYVNVRHLMPTRYTVSNDFDVKALAPEASLE 141
K+ R K FI+ VN +HLMPTRYT+ D D+K +A +L+
Sbjct 63 AKKSRVKCFIKLVNYQHLMPTRYTL--DVDLKEVATLDALK 101
> ath:AT4G15000 60S ribosomal protein L27 (RPL27C); K02901 large
subunit ribosomal protein L27e
Length=131
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 68/101 (67%), Gaps = 3/101 (2%)
Query 42 RVLKPGRVVVVLNGRMAGKKGVVV-STSEGTKERHFCYCLVAGIEKAPLRVSKRMSTTKV 100
+ LK + V++L GR AGKK V++ S +G ++R + +CLVAG++K P +V ++ S K
Sbjct 3 KFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAKKT 62
Query 101 QKRMRPKAFIRYVNVRHLMPTRYTVSNDFDVKALAPEASLE 141
K+ R K FI+ VN +HLMPTRYT+ D D+K +A +L+
Sbjct 63 AKKSRVKCFIKLVNYQHLMPTRYTL--DVDLKEVATLDALQ 101
> sce:YHR010W RPL27A, RPL27; L27A; K02901 large subunit ribosomal
protein L27e
Length=136
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 65/103 (63%), Gaps = 5/103 (4%)
Query 40 LRRVLKPGRVVVVLNGRMAGKKGVVVST-SEGTKERHFCYCLVAGIEKAPLRVSKRMSTT 98
+ + LK G+V VV+ GR AGKK V+V EG+K F + LVAGIE+ PL+V+K+
Sbjct 1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPLKVTKKHGAK 60
Query 99 KVQKRMRPKAFIRYVNVRHLMPTRYTVSNDFDVKALAPEASLE 141
KV KR + K FI+ VN HL+PTRYT+ DV+A S E
Sbjct 61 KVAKRTKIKPFIKVVNYNHLLPTRYTL----DVEAFKSVVSTE 99
> ath:AT2G32220 60S ribosomal protein L27 (RPL27A); K02901 large
subunit ribosomal protein L27e
Length=135
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Query 42 RVLKPGRVVVVLNGRMAGKKGVVV-STSEGTKERHFCYCLVAGIEKAPLRVSKRMSTTKV 100
+ +KPG+ V++L GR GKK V+V S +GT E+ + +CLVAG++K P +V ++ S K
Sbjct 3 KCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAKKT 62
Query 101 QKRMRPKAFIRYVNVRHLMPTRYTVSNDFDVK 132
K+ R K F + +N +H+MPTRYT+ D D+K
Sbjct 63 AKKSRVKCFFKVINYQHVMPTRYTL--DLDLK 92
> xla:380115 rpl27, MGC68687; ribosomal protein L27 (EC:3.6.5.3);
K02901 large subunit ribosomal protein L27e
Length=136
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Query 42 RVLKPGRVVVVLNGRMAGKKGVVV-STSEGTKERHFCYCLVAGIEKAPLRVSKRMSTTKV 100
+ +KPG+VV+VL GR AG+K V+V + +GT +R + + LVAGI++ P +V+ M ++
Sbjct 3 KFMKPGKVVLVLAGRYAGRKAVIVKNVDDGTSDRQYSHALVAGIDRYPRKVTATMGKKRI 62
Query 101 QKRMRPKAFIRYVNVRHLMPTRYTVSNDFDVKALAPEASLEDSA 144
KR + K+F++ N HLMPTRY+V D KA+ + D A
Sbjct 63 AKRSKIKSFVKVYNYNHLMPTRYSVDIPLD-KAVVNKDVFRDPA 105
> dre:325618 rpl27, fc93a08, wu:fc93a08, zgc:56171; ribosomal
protein L27; K02901 large subunit ribosomal protein L27e
Length=136
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query 42 RVLKPGRVVVVLNGRMAGKKGVVVST-SEGTKERHFCYCLVAGIEKAPLRVSKRMSTTKV 100
+ +KPG+VV+VL GR AG+K V+V +GT +R + + LVAGI++ P +V+ M K+
Sbjct 3 KFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVAGIDRYPRKVTATMGKKKI 62
Query 101 QKRMRPKAFIRYVNVRHLMPTRYTVSNDFD 130
KR + KAF++ N HLMPTRY+V D
Sbjct 63 AKRSKIKAFVKVFNYNHLMPTRYSVDIPLD 92
> sce:YDR471W RPL27B; L27B; K02901 large subunit ribosomal protein
L27e
Length=136
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
Query 40 LRRVLKPGRVVVVLNGRMAGKKGVVVST-SEGTKERHFCYCLVAGIEKAPLRVSKRMSTT 98
+ + LK G+V VV+ GR AGKK V+V EG+K F + LVAGIE+ P +V+K+
Sbjct 1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPSKVTKKHGAK 60
Query 99 KVQKRMRPKAFIRYVNVRHLMPTRYTVSNDFDVKALAPEASLE 141
KV KR + K FI+ VN HL+PTRYT+ DV+A S E
Sbjct 61 KVAKRTKIKPFIKVVNYNHLLPTRYTL----DVEAFKSVVSTE 99
> mmu:19942 Rpl27, MGC103134; ribosomal protein L27 (EC:3.6.5.3);
K02901 large subunit ribosomal protein L27e
Length=136
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query 42 RVLKPGRVVVVLNGRMAGKKGVVVST-SEGTKERHFCYCLVAGIEKAPLRVSKRMSTTKV 100
+ +KPG+VV+VL GR +G+K V+V +GT +R + + LVAGI++ P +V+ M K+
Sbjct 3 KFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKI 62
Query 101 QKRMRPKAFIRYVNVRHLMPTRYTVSNDFD 130
KR + K+F++ N HLMPTRY+V D
Sbjct 63 AKRSKIKSFVKVYNYNHLMPTRYSVDIPLD 92
> mmu:100039431 Gm11518; 60S ribosomal protein L27; K02901 large
subunit ribosomal protein L27e
Length=136
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query 42 RVLKPGRVVVVLNGRMAGKKGVVVST-SEGTKERHFCYCLVAGIEKAPLRVSKRMSTTKV 100
+ +KPG+VV+VL GR +G+K V+V +GT +R + + LVAGI++ P +V+ M K+
Sbjct 3 KFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKI 62
Query 101 QKRMRPKAFIRYVNVRHLMPTRYTVSNDFD 130
KR + K+F++ N HLMPTRY+V D
Sbjct 63 AKRSKIKSFVKVYNYNHLMPTRYSVDIPLD 92
> hsa:6155 RPL27; ribosomal protein L27; K02901 large subunit
ribosomal protein L27e
Length=136
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query 42 RVLKPGRVVVVLNGRMAGKKGVVVST-SEGTKERHFCYCLVAGIEKAPLRVSKRMSTTKV 100
+ +KPG+VV+VL GR +G+K V+V +GT +R + + LVAGI++ P +V+ M K+
Sbjct 3 KFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKI 62
Query 101 QKRMRPKAFIRYVNVRHLMPTRYTVSNDFD 130
KR + K+F++ N HLMPTRY+V D
Sbjct 63 AKRSKIKSFVKVYNYNHLMPTRYSVDIPLD 92
> mmu:622673 Gm6341, EG622673; predicted pseudogene 6341
Length=136
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Query 42 RVLKPGRVVVVLNGRMAGKKGVVVST-SEGTKERHFCYCLVAGIEKAPLRVSKRMSTTKV 100
+ +KPG+VV+VL G +G+K V+V +GT +R + + LVAGI++ P +V+ M K+
Sbjct 3 KFMKPGKVVLVLAGHYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKI 62
Query 101 QKRMRPKAFIRYVNVRHLMPTRYTVSNDFD 130
KR + K+F++ N HLMPTRY+V D
Sbjct 63 AKRSKIKSFVKVYNYNHLMPTRYSVDIPLD 92
> mmu:100504769 60S ribosomal protein L27-like
Length=136
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Query 42 RVLKPGRVVVVLNGRMAGKKGVVVST-SEGTKERHFCYCLVAGIEKAPLRVSKRMSTTKV 100
+ +KPG+VV+VL GR + +K V+V +GT +R + + LVAGI++ P +V+ M K+
Sbjct 3 KFMKPGKVVLVLAGRYSRRKAVIVKNIDDGTLDRPYSHALVAGIDRYPRKVTAAMGKKKI 62
Query 101 QKRMRPKAFIRYVNVRHLMPTRYTVSNDFD 130
KR + K F++ N HLMPTRY+V D
Sbjct 63 TKRSKIKFFVKVYNYNHLMPTRYSVDIPLD 92
> mmu:223745 Gm4825, EG223745; predicted pseudogene 4825
Length=136
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query 40 LRRVLKPGRVVVVLNGRMAGKKGVVVST-SEGTKERHFCYCLVAGIEKAPLRVSKRMSTT 98
+ + +KPG+VV+VL GR +G K V++ GT +R + LVAGI+ P +V+ M
Sbjct 1 MEKFMKPGKVVLVLAGRYSGHKAVIMKNIDNGTSDRPYSRVLVAGIDCYPQKVTAAMGKK 60
Query 99 KVQKRMRPKAFIRYVNVRHLMPTRYTVS 126
K+ KR + K+ ++ N HL+PTR++V+
Sbjct 61 KISKRSKFKSIVKVYNYNHLIPTRHSVA 88
> pfa:MAL7P1.56 VAR; erythrocyte membrane protein 1, PfEMP1; K13850
erythrocyte membrane protein 1
Length=2192
Score = 37.4 bits (85), Expect = 0.015, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query 1 ALISVSLIYLSEENHHISGIFSVLFILATDKRLPLRIRALRRVLKPGRVVVVLNGRMAGK 60
AL S++L++L ++ H +FSV+ I +D +P + L P R + +G+ GK
Sbjct 1772 ALTSIALLFLKKKTKHPVDLFSVINIPKSDYDIPTK-------LSPNRYIPYTSGKYRGK 1824
Query 61 KGVVVSTSEGT 71
+ + + GT
Sbjct 1825 RYIYLEGDSGT 1835
> pfa:PFA_0765c VAR; erythrocyte membrane protein 1, PfEMP1; K13850
erythrocyte membrane protein 1
Length=2203
Score = 35.0 bits (79), Expect = 0.079, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query 1 ALISVSLIYLSEENHHISGIFSVLFILATDKRLPLRIRALRRVLKPGRVVVVLNGRMAGK 60
AL S++ ++L ++ H +FSV+ I +D +P + L P R + +G+ GK
Sbjct 1759 ALTSIAFLFLKKKTHAPLDLFSVIDIPKSDYDIPTK-------LSPNRYIPYTSGKYRGK 1811
Query 61 KGVVVSTSEGT 71
+ + + GT
Sbjct 1812 RYIYLEGDSGT 1822
> pfa:PFB1055c erythrocyte membrane protein 1, PfEMP1; K13850
erythrocyte membrane protein 1
Length=2177
Score = 34.7 bits (78), Expect = 0.100, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query 1 ALISVSLIYLSEENHHISGIFSVLFILATDKRLPLRIRALRRVLKPGRVVVVLNGRMAGK 60
AL S++ ++L ++ H +FSV+ I +D +P + L P R + +G+ GK
Sbjct 1758 ALGSIAFLFLKKKTKHPVDLFSVINIPKSDYDIPTK-------LSPNRYIPYTSGKYRGK 1810
Query 61 KGVVVSTSEGT 71
+ + + GT
Sbjct 1811 RYIYLEGDSGT 1821
> sce:YML010W SPT5; Protein involved in regulating Pol I and Pol
II transcription and pre-mRNA processing; forms a complex
with Spt4p; contains a C-terminal repeat domain that is a target
for phosphorylation by Sgv1p
Length=1063
Score = 32.3 bits (72), Expect = 0.53, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 0/38 (0%)
Query 33 LPLRIRALRRVLKPGRVVVVLNGRMAGKKGVVVSTSEG 70
L I LR++ +PG V V+NG G G+V+ +G
Sbjct 573 LEFPISTLRKIFEPGDHVTVINGEHQGDAGLVLMVEQG 610
Score = 29.3 bits (64), Expect = 4.2, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 0/34 (0%)
Query 36 RIRALRRVLKPGRVVVVLNGRMAGKKGVVVSTSE 69
+ +A + +PG + VLNG G KG+V T++
Sbjct 526 KAQAAKVTFQPGDRIEVLNGEQRGSKGIVTRTTK 559
> pfa:PFC1120c (3D7-varT3-2); var (3D7-varT3-2)
Length=2169
Score = 31.2 bits (69), Expect = 1.2, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query 1 ALISVSLIYLSEENHHISGIFSVLFILATDKRLPLRIRALRRVLKPGRVVVVLNGRMAGK 60
AL S++ ++L ++ +FSV+ I +D +P + L P R + +G+ GK
Sbjct 1732 ALGSIAFLFLKKKTKSPVDLFSVINIPKSDYDIPTK-------LSPNRYIPYTSGKYRGK 1784
Query 61 KGVVVSTSEGT 71
+ + + GT
Sbjct 1785 RYIYLEGDSGT 1795
> pfa:MAL7P1.55 VAR; erythrocyte membrane protein 1, PfEMP1; K13850
erythrocyte membrane protein 1
Length=2239
Score = 31.2 bits (69), Expect = 1.2, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query 1 ALISVSLIYLSEENHH-ISGIFSVLFILATDKRLPLRIRALRRVLKPGRVVVVLNGRMAG 59
AL S++L++L ++ + +F +L I +D +P + L P R + +G+ G
Sbjct 1751 ALTSIALLFLKKKTKSSVGNLFQILQIPKSDYDIPTK-------LSPNRYIPYTSGKYRG 1803
Query 60 KKGVVVSTSEGT 71
K+ + + GT
Sbjct 1804 KRYIYLEGDSGT 1815
> pfa:PFL2665c VAR; erythrocyte membrane protein 1, PfEMP1; K13850
erythrocyte membrane protein 1
Length=2268
Score = 30.8 bits (68), Expect = 1.6, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query 4 SVSLIYLSEENHHISGIFSVLFILATDKRLPLRIRALRRVLKPGRVVVVLNGRMAGKKGV 63
+ + YL ++ H +FSV+ I +D +P + L P R + +G+ GK+ +
Sbjct 1818 AFTYFYLKKKTKHPVDLFSVINIPKSDYDIPTK-------LSPNRYIPYTSGKYRGKRYI 1870
Query 64 VVSTSEGT 71
+ GT
Sbjct 1871 YLEGDSGT 1878
> pfa:PFC0005w VAR; erythrocyte membrane protein 1, PfEMP1; K13850
erythrocyte membrane protein 1
Length=2209
Score = 30.0 bits (66), Expect = 2.6, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query 1 ALISVSLIYLSEENHHISGIFSVLFILATDKRLPLRIRALRRVLKPGRVVVVLNGRMAGK 60
AL S++L++L ++ + V+ I +D +P + L P R + +G+ GK
Sbjct 1763 ALTSIALLFLKKKTKSTIDLLRVINIPKSDYGMPTK-------LSPNRYIPYTSGKYRGK 1815
Query 61 KGVVVSTSEGT 71
+ + + GT
Sbjct 1816 RYIYLEGDSGT 1826
> pfa:MAL13P1.1 VAR; erythrocyte membrane protein 1, PfEMP1; K13850
erythrocyte membrane protein 1
Length=2162
Score = 29.3 bits (64), Expect = 4.1, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query 4 SVSLIYLSEENHHISGIFSVLFILATDKRLPLRIRALRRVLKPGRVVVVLNGRMAGKKGV 63
+ + YL ++ + +FSV+ I +D +P + L P R + +G+ GK+ +
Sbjct 1718 TFTYFYLKKKTKRLVDLFSVINIPKSDYDIPTK-------LSPNRYIPYTSGKYRGKRYI 1770
Query 64 VVSTSEGT 71
+ GT
Sbjct 1771 YLEGDSGT 1778
> dre:553755 atp5a1, zgc:154103; ATP synthase, H+ transporting,
mitochondrial F1 complex, alpha subunit 1, cardiac muscle;
K02132 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14]
Length=551
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 18/97 (18%)
Query 47 GRVVVVLNGRMAGKKGVVVST-------SEGTKERHFCYCLVAGIEKAPLRVSKRMSTTK 99
G+ +++ R GK + + T +EGT+E+ YC+ I + KR + +
Sbjct 204 GQRELIIGDRQTGKTAIAIDTIINQKRFNEGTEEKKKLYCIYVAIGQ------KRSTVAQ 257
Query 100 VQKRMRPKAFIRYVNVRHLMPTRYTVSNDFDVKALAP 136
+ KR+ ++Y V T S+ ++ LAP
Sbjct 258 LVKRLTDADAMKYTIV-----VSATASDAAPLQYLAP 289
> pfa:PF08_0140 VAR; erythrocyte membrane protein 1, PfEMP1; K13850
erythrocyte membrane protein 1
Length=2980
Score = 28.5 bits (62), Expect = 6.8, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query 1 ALISVSLIYLSEENHHISGIFSVLFILATDKRLPLRIRALRRVLKPGRVVVVLNGRMAGK 60
AL S++ ++L ++ + V+ I +D +P + L P R + +G+ GK
Sbjct 2535 ALGSIAFLFLKKKTKSTIDLLRVINIPKSDYNIPTK-------LSPNRYIPYTSGKYRGK 2587
Query 61 KGVVVSTSEGT 71
+ + + GT
Sbjct 2588 RYIYIEGDSGT 2598
> tgo:TGME49_055390 hypothetical protein
Length=2731
Score = 28.5 bits (62), Expect = 6.9, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query 62 GVVVSTSEGTKERHFCYCLVAGIEKAPLRVSKRMSTT-KVQKRMR 105
G S EG +E HFC A +E+ P + T +VQ+R R
Sbjct 1838 GPTASADEGRRENHFC----AAVERPPESARRERGTRYEVQRRSR 1878
> xla:444819 rpl6, MGC84358; ribosomal protein L6; K02934 large
subunit ribosomal protein L6e
Length=258
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 9/56 (16%)
Query 38 RALRRVLKPGRVVVVLNGRMAGKKGVVVSTSEGTKERHFCYCLVAG---IEKAPLR 90
R LR + PG V+++LNGR GK+ V + K+ LV G I + PLR
Sbjct 108 RKLRSSITPGTVLILLNGRHRGKRVVFL------KQLPTGLLLVTGPLAINRIPLR 157
> pfa:PF10_0001 erythrocyte membrane protein 1, PfEMP1; K13850
erythrocyte membrane protein 1
Length=2241
Score = 28.5 bits (62), Expect = 7.7, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query 1 ALISVSLIYLSEENH-HISGIFSVLFILATDKRLPLRIRALRRVLKPGRVVVVLNGRMAG 59
AL S++ ++L ++ + +F +L I +D +P + L P R + +G+ G
Sbjct 1791 ALGSIAFLFLKKKTKASVGNLFQILQIPKSDYDIPTK-------LSPNRYIPYTSGKYRG 1843
Query 60 KKGVVVSTSEGT 71
K+ + + GT
Sbjct 1844 KRYIYLEGDSGT 1855
> mmu:620213 Gm6136, EG620213; predicted pseudogene 6136
Length=296
Score = 28.1 bits (61), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query 37 IRALRRVLKPGRVVVVLNGRMAGKKGVVVSTSEGTKERHFCYCLVAG---IEKAPLR 90
+R LR + PG V+++L GR GK+ V + K+ LV G I + PLR
Sbjct 145 VRRLRSSITPGTVLIILTGRHRGKRVVFL------KQLDSGLLLVTGPLVINRVPLR 195
> mmu:19988 Rpl6, MGC117949, Taxreb107; ribosomal protein L6;
K02934 large subunit ribosomal protein L6e
Length=296
Score = 28.1 bits (61), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query 37 IRALRRVLKPGRVVVVLNGRMAGKKGVVVSTSEGTKERHFCYCLVAG---IEKAPLR 90
+R LR + PG V+++L GR GK+ V + K+ LV G I + PLR
Sbjct 145 VRRLRSSITPGTVLIILTGRHRGKRVVFL------KQLDSGLLLVTGPLVINRVPLR 195
Lambda K H
0.324 0.136 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2814663556
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40