bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_8485_orf1
Length=148
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_114420 AP-4 complex subunit sigma-1, putative ; K12... 237 1e-62
ath:AT2G19790 clathrin adaptor complex small chain family prot... 211 6e-55
pfa:PFD1090c clathrin assembly protein, putative; K12403 AP-4 ... 196 2e-50
bbo:BBOV_IV010980 23.m06517; clathrin assembly protein small s... 182 3e-46
cpv:cgd8_4900 clathrin assembly protein ; K12403 AP-4 complex ... 181 1e-45
xla:734760 ap4s1, MGC130903; adaptor-related protein complex 4... 174 7e-44
hsa:11154 AP4S1, AP47B, CLA20, CLAPS4, FLJ32366; adaptor-relat... 173 2e-43
mmu:11782 Ap4s1, AI314282; adaptor-related protein complex AP-... 172 5e-43
dre:368852 ap4s1, AP4, MGC136677, si:dz115o7.1, si:dz234g15.5,... 164 1e-40
tpv:TP01_0763 clathrin assembly protein; K12403 AP-4 complex s... 158 5e-39
xla:443609 ap1s3; adaptor-related protein complex 1, sigma 3 s... 125 3e-29
sce:YLR170C APS1, YAP19; Aps1p 124 9e-29
mmu:11769 Ap1s1, AP19; adaptor protein complex AP-1, sigma 1; ... 124 1e-28
hsa:1174 AP1S1, AP19, CLAPS1, FLJ92436, SIGMA1A, WUGSC:H_DJ074... 124 1e-28
mmu:108012 Ap1s2, 1500012A13Rik, AI853648, EST1; adaptor-relat... 123 2e-28
hsa:8905 AP1S2, MGC:1902, MRX59, SIGMA1B; adaptor-related prot... 123 2e-28
xla:495185 ap1s2; adaptor-related protein complex 1, sigma 2 s... 123 2e-28
mmu:252903 Ap1s3, 1190009B22, Jr2, [s]3A; adaptor-related prot... 122 3e-28
xla:399079 ap1s1, ap19, claps1, sigma1a; adaptor-related prote... 122 4e-28
ath:AT1G47830 clathrin coat assembly protein, putative; K11827... 122 5e-28
dre:550415 ap1s3a, zgc:112172; adaptor-related protein complex... 121 7e-28
ath:AT2G17380 AP19; AP19; protein binding / protein transporter 120 2e-27
dre:327237 ap1s2, wu:fb94g06, wu:fd19a08, zgc:65824, zgc:77925... 120 2e-27
pfa:PF11_0187 clathrin assembly protein AP19, putative 119 3e-27
ath:AT4G35410 clathrin adaptor complex small chain family protein 119 3e-27
hsa:130340 AP1S3; adaptor-related protein complex 1, sigma 3 s... 118 6e-27
dre:337771 MGC162858, MGC174667, fj40d12, hm:zewp0159, wu:fj40... 117 1e-26
dre:447897 ap1s3b, zgc:101676; adaptor-related protein complex... 116 2e-26
cel:F29G9.3 aps-1; AdaPtin, Small chain (clathrin associated c... 115 4e-26
tpv:TP01_0754 clathrin assembly protein 114 9e-26
cpv:cgd8_4040 Aps1p/AP17 like clathrin adaptor protein 114 1e-25
bbo:BBOV_IV010890 23.m06432; clathrin assembly protein small s... 112 6e-25
tgo:TGME49_113450 clathrin coat assembly protein AP17, putativ... 111 7e-25
cel:Y48G8AL.14 aps-3; AdaPtin, Small chain (clathrin associate... 107 1e-23
dre:436812 ap3s2, zgc:92795; adaptor-related protein complex 3... 107 1e-23
dre:100334392 adaptor-related protein complex 3, sigma 2 subun... 107 1e-23
mmu:11778 Ap3s2, [s]3B; adaptor-related protein complex 3, sig... 107 2e-23
hsa:10239 AP3S2, AP3S3, FLJ35955, sigma3b; adaptor-related pro... 107 2e-23
mmu:11777 Ap3s1, MGC117528, [s]3A; adaptor-related protein com... 106 2e-23
hsa:1176 AP3S1, CLAPS3, Sigma3A; adaptor-related protein compl... 106 2e-23
pfa:PFB0805c clathrin coat assembly protein, putative 106 3e-23
mmu:232910 Ap2s1, AI043088, MGC62945; adaptor-related protein ... 105 4e-23
hsa:1175 AP2S1, AP17, AP17-DELTA, CLAPS2; adaptor-related prot... 105 4e-23
dre:100148085 MGC65827, wu:fk78e12; zgc:65827; K11827 AP-2 com... 105 5e-23
xla:447078 ap2s1, MGC85224; adaptor-related protein complex 2,... 105 5e-23
xla:379829 ap3s1, MGC52794; adaptor-related protein complex 3,... 105 8e-23
ath:AT3G50860 clathrin adaptor complex small chain family prot... 104 8e-23
tgo:TGME49_070370 clathrin-associated adaptor complex small ch... 104 9e-23
dre:449791 ap3s1, wu:fa92f10, zgc:101869; adaptor-related prot... 103 1e-22
cel:F02E8.3 aps-2; AdaPtin, Small chain (clathrin associated c... 103 2e-22
> tgo:TGME49_114420 AP-4 complex subunit sigma-1, putative ; K12403
AP-4 complex subunit sigma-1
Length=145
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 109/144 (75%), Positives = 130/144 (90%), Gaps = 1/144 (0%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
MI+F+LMVNKQGQTRLSQYY+F+ + ER ALEGELIRKCL R+E QCSF+Q+RQY V+YR
Sbjct 1 MIKFILMVNKQGQTRLSQYYDFVPIPERVALEGELIRKCLGRTELQCSFVQHRQYSVIYR 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
RYASLYFIVG+ DE E+NELAILE IHCLVETLD+FFENVCELDIMFH+EKAHFI+ EM+
Sbjct 61 RYASLYFIVGVKDE-ELNELAILEFIHCLVETLDKFFENVCELDIMFHLEKAHFILDEMV 119
Query 125 TDGCIVETNKNNIMAPIHMLEKAP 148
DGCIVETNK+N+++ IHM++ A
Sbjct 120 MDGCIVETNKSNVLSLIHMMDAAS 143
> ath:AT2G19790 clathrin adaptor complex small chain family protein;
K12403 AP-4 complex subunit sigma-1
Length=143
Score = 211 bits (538), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 125/142 (88%), Gaps = 2/142 (1%)
Query 6 IRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYRR 65
IRF+LMVNKQGQTRL+QYYE+L + ER ALEGE++RKCL+R++ QCSF+++R YK+VYRR
Sbjct 3 IRFILMVNKQGQTRLAQYYEWLTLEERRALEGEIVRKCLARNDQQCSFVEHRNYKIVYRR 62
Query 66 YASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMIT 125
YASL+F+VG+ D+ NELAILE IH LVET+D+ F NVCELDIMFH+EKAHF++ EM+
Sbjct 63 YASLFFMVGVDDDE--NELAILEFIHLLVETMDKHFGNVCELDIMFHLEKAHFMLEEMVM 120
Query 126 DGCIVETNKNNIMAPIHMLEKA 147
+GCIVET+K NI++PI +++KA
Sbjct 121 NGCIVETSKANILSPIQLMDKA 142
> pfa:PFD1090c clathrin assembly protein, putative; K12403 AP-4
complex subunit sigma-1
Length=146
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 91/144 (63%), Positives = 118/144 (81%), Gaps = 1/144 (0%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
MI F+LMVNKQGQTRLSQYY L + E+ LEGELIRKCLSR + QCSF+QYR+YK++YR
Sbjct 1 MIEFLLMVNKQGQTRLSQYYNHLSIEEKTILEGELIRKCLSRVDYQCSFLQYREYKIIYR 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
RYASLY IVG+ D+ +VNE AILE+IH ++E LD+++ENVCELDIMF+I+K HFII E+I
Sbjct 61 RYASLYLIVGVSDQ-DVNEFAILEMIHNIIEILDKYYENVCELDIMFNIDKTHFIIDEII 119
Query 125 TDGCIVETNKNNIMAPIHMLEKAP 148
+G I + NK N++ PI +++K
Sbjct 120 CNGEICDMNKTNVLRPILLMDKVS 143
> bbo:BBOV_IV010980 23.m06517; clathrin assembly protein small
subunit; K12403 AP-4 complex subunit sigma-1
Length=145
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 83/144 (57%), Positives = 117/144 (81%), Gaps = 2/144 (1%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
MI+F+LM+NKQGQTR S YY L V+E+ ALEGE+ RKCL R E+Q SF+ RQ+K+VYR
Sbjct 1 MIKFILMINKQGQTRFSHYYTSLSVAEKCALEGEIFRKCLCRDENQSSFMHIRQHKIVYR 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
RYASLY I+G + NELA++ELIH +VETL+ +FE+VCE DIMF++EK H+II+E+I
Sbjct 61 RYASLYIIIGATESE--NELALIELIHNIVETLEGYFESVCEFDIMFNLEKVHYIINELI 118
Query 125 TDGCIVETNKNNIMAPIHMLEKAP 148
+G I++TN++N++ P+ +++KAP
Sbjct 119 CNGRIIDTNRSNVLHPLFLMDKAP 142
> cpv:cgd8_4900 clathrin assembly protein ; K12403 AP-4 complex
subunit sigma-1
Length=158
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/144 (61%), Positives = 113/144 (78%), Gaps = 1/144 (0%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
M++F+L+VNKQGQ RLSQYY + ER LEG+LIRKCL + E+QC FI++ YK+V+R
Sbjct 1 MLKFLLLVNKQGQIRLSQYYTHVSKEERFILEGQLIRKCLLKGENQCPFIEFNNYKIVFR 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
RYASLYFI+G L+ NEL+ ELIH +VETLD++FENVCELDIMF+++KAH II E+I
Sbjct 61 RYASLYFIMG-LENSNTNELSYYELIHFIVETLDKYFENVCELDIMFNLDKAHIIIEEII 119
Query 125 TDGCIVETNKNNIMAPIHMLEKAP 148
G I ETNK+NIM + +LEKA
Sbjct 120 MCGRIAETNKSNIMQYMSLLEKAS 143
> xla:734760 ap4s1, MGC130903; adaptor-related protein complex
4, sigma 1 subunit; K12403 AP-4 complex subunit sigma-1
Length=144
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 83/144 (57%), Positives = 111/144 (77%), Gaps = 2/144 (1%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
MI+F L+VNKQGQTRLS+YYE EV R LE ++IR CLSRS+ QCSFI+Y+ +K+VYR
Sbjct 1 MIKFFLIVNKQGQTRLSRYYERTEVQRRTLLESDIIRLCLSRSKDQCSFIEYKDFKLVYR 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
+YASL+ +VG +DE E NE+A+ ELIH VE LD++F V ELDIMF+++K H I+ EM+
Sbjct 61 QYASLFIVVG-IDETE-NEMAVFELIHNFVEVLDKYFSRVSELDIMFNLDKVHIILDEML 118
Query 125 TDGCIVETNKNNIMAPIHMLEKAP 148
+G VETNK I+AP+ +L+K
Sbjct 119 LNGSAVETNKTRILAPLLVLDKVA 142
> hsa:11154 AP4S1, AP47B, CLA20, CLAPS4, FLJ32366; adaptor-related
protein complex 4, sigma 1 subunit; K12403 AP-4 complex
subunit sigma-1
Length=144
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 79/142 (55%), Positives = 111/142 (78%), Gaps = 2/142 (1%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
MI+F LMVNKQGQTRLS+YYE +++++R LE E+I+ CLSRS QCSFI+Y+ +K++YR
Sbjct 1 MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYR 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
+YA+L+ +VG+ D NE+AI E IH VE LD +F V ELDIMF+++K H I+ EM+
Sbjct 61 QYAALFIVVGVNDTE--NEMAIYEFIHNFVEVLDEYFSRVSELDIMFNLDKVHIILDEMV 118
Query 125 TDGCIVETNKNNIMAPIHMLEK 146
+GCIVETN+ I+AP+ +L+K
Sbjct 119 LNGCIVETNRARILAPLLILDK 140
> mmu:11782 Ap4s1, AI314282; adaptor-related protein complex AP-4,
sigma 1; K12403 AP-4 complex subunit sigma-1
Length=144
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 79/142 (55%), Positives = 111/142 (78%), Gaps = 2/142 (1%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
MI+F LMVNKQGQTRLS+YYE +++++RA LE E+ + CLSRS QCSFI+Y+ +K++YR
Sbjct 1 MIKFFLMVNKQGQTRLSKYYEHVDINKRALLETEVSKSCLSRSSEQCSFIEYKDFKLIYR 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
+YA+L+ +VG+ D NE+AI E IH VE LD +F V ELDIMF+++K H I+ EM+
Sbjct 61 QYAALFVVVGVNDTE--NEMAIYEFIHNFVEVLDGYFSRVSELDIMFNLDKVHIILDEMV 118
Query 125 TDGCIVETNKNNIMAPIHMLEK 146
+GCIVETN+ I+AP+ +L+K
Sbjct 119 LNGCIVETNRARILAPLLILDK 140
> dre:368852 ap4s1, AP4, MGC136677, si:dz115o7.1, si:dz234g15.5,
zgc:136677; adaptor-related protein complex 4, sigma 1 subunit;
K12403 AP-4 complex subunit sigma-1
Length=140
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 76/142 (53%), Positives = 111/142 (78%), Gaps = 6/142 (4%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
MI+F+LMVNKQGQTRLS+YYE +++ +RAALE +++R CL+R + +CSF++Y+ YK+VYR
Sbjct 1 MIKFLLMVNKQGQTRLSKYYEAVDLGKRAALEADVVRGCLARRKEECSFVEYKDYKLVYR 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
+YA+L+ +VG+ + NEL+I EL+H VE LD++F V IMF+++K H I+ EMI
Sbjct 61 QYAALFIVVGVTENE--NELSIYELVHNFVEVLDKYFSRV----IMFNLDKVHIILDEMI 114
Query 125 TDGCIVETNKNNIMAPIHMLEK 146
+G IVETNKN I+AP+ L+K
Sbjct 115 LNGHIVETNKNRILAPLLALDK 136
> tpv:TP01_0763 clathrin assembly protein; K12403 AP-4 complex
subunit sigma-1
Length=145
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 107/142 (75%), Gaps = 2/142 (1%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
MI+FVL++NK+GQTRLS+YY + ER LE EL+RKC++R+E+ C F Y+ +V+R
Sbjct 1 MIKFVLLINKRGQTRLSKYYTNYPLEERTLLESELLRKCITRNENHCPFFTYKDTTIVFR 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
RYASL+FI+G + NEL I ELIH +V LD+ FE+VCE+DI++++EKAH I++EMI
Sbjct 61 RYASLFFIIGTTSDE--NELEIYELIHNIVVALDKHFESVCEIDILYNLEKAHLILNEMI 118
Query 125 TDGCIVETNKNNIMAPIHMLEK 146
+G I+E N N++ P+ +LEK
Sbjct 119 ANGRIIECNIANVLYPLSVLEK 140
> xla:443609 ap1s3; adaptor-related protein complex 1, sigma 3
subunit
Length=154
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 92/133 (69%), Gaps = 2/133 (1%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
MIRF+L+ ++QG+ RL ++Y L E+ + EL++ LSRS SF+ ++ K+VY+
Sbjct 1 MIRFLLLFSRQGKLRLQKWYVTLPDKEKRKITRELVQIILSRSPKMSSFVDWKDLKLVYK 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
RYASLYF + D+ NEL LEL+H LVE LD++F NVCELDI+F+ EKA+FI+ E +
Sbjct 61 RYASLYFCCAIEDQD--NELLTLELVHRLVELLDKYFGNVCELDIIFNFEKAYFILDEFL 118
Query 125 TDGCIVETNKNNI 137
G I ET+K ++
Sbjct 119 MGGEIQETSKESV 131
> sce:YLR170C APS1, YAP19; Aps1p
Length=156
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 98/142 (69%), Gaps = 4/142 (2%)
Query 6 IRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYRR 65
++++L+V++QG+ RL ++Y + E+A + +L L+R C+ I+Y +KVVY+R
Sbjct 4 LKYLLLVSRQGKIRLKKWYTAMSAGEKAKIVKDLTPTILARKPKMCNIIEYNDHKVVYKR 63
Query 66 YASLYFIVGLLDEPEV-NELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
YASLYFIVG+ P+V NEL LE+IH VET+D +F NVCELDI+F+ K + I++EMI
Sbjct 64 YASLYFIVGM--TPDVDNELLTLEIIHRFVETMDTYFGNVCELDIIFNFSKVYDILNEMI 121
Query 125 T-DGCIVETNKNNIMAPIHMLE 145
DG I E+++ ++ + +++
Sbjct 122 MCDGSIAESSRKEVLHHVTVMD 143
> mmu:11769 Ap1s1, AP19; adaptor protein complex AP-1, sigma 1;
K12394 AP-1 complex subunit sigma 1/2
Length=158
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 93/138 (67%), Gaps = 2/138 (1%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
M+RF+L+ ++QG+ RL ++Y ER + EL++ L+R CSF+++R KVVY+
Sbjct 1 MMRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYK 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
RYASLYF + E + NEL LELIH VE LD++F +VCELDI+F+ EKA+FI+ E +
Sbjct 61 RYASLYFCCAI--EGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFL 118
Query 125 TDGCIVETNKNNIMAPIH 142
G + +T+K +++ I
Sbjct 119 MGGDVQDTSKKSVLKAIE 136
> hsa:1174 AP1S1, AP19, CLAPS1, FLJ92436, SIGMA1A, WUGSC:H_DJ0747G18.2;
adaptor-related protein complex 1, sigma 1 subunit;
K12394 AP-1 complex subunit sigma 1/2
Length=158
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 93/138 (67%), Gaps = 2/138 (1%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
M+RF+L+ ++QG+ RL ++Y ER + EL++ L+R CSF+++R KVVY+
Sbjct 1 MMRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYK 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
RYASLYF + E + NEL LELIH VE LD++F +VCELDI+F+ EKA+FI+ E +
Sbjct 61 RYASLYFCCAI--EGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFL 118
Query 125 TDGCIVETNKNNIMAPIH 142
G + +T+K +++ I
Sbjct 119 MGGDVQDTSKKSVLKAIE 136
> mmu:108012 Ap1s2, 1500012A13Rik, AI853648, EST1; adaptor-related
protein complex 1, sigma 2 subunit; K12394 AP-1 complex
subunit sigma 1/2
Length=160
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 93/136 (68%), Gaps = 2/136 (1%)
Query 6 IRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYRR 65
++F+L+ ++QG+ RL ++Y L E+ + EL++ L+R CSF+++R K+VY+R
Sbjct 1 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR 60
Query 66 YASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMIT 125
YASLYF + D+ NEL LE+IH VE LD++F +VCELDI+F+ EKA+FI+ E +
Sbjct 61 YASLYFCCAIEDQD--NELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLL 118
Query 126 DGCIVETNKNNIMAPI 141
G + ET+K N++ I
Sbjct 119 GGEVQETSKKNVLKAI 134
> hsa:8905 AP1S2, MGC:1902, MRX59, SIGMA1B; adaptor-related protein
complex 1, sigma 2 subunit; K12394 AP-1 complex subunit
sigma 1/2
Length=157
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 93/137 (67%), Gaps = 2/137 (1%)
Query 6 IRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYRR 65
++F+L+ ++QG+ RL ++Y L E+ + EL++ L+R CSF+++R K+VY+R
Sbjct 1 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR 60
Query 66 YASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMIT 125
YASLYF + D+ NEL LE+IH VE LD++F +VCELDI+F+ EKA+FI+ E +
Sbjct 61 YASLYFCCAIEDQD--NELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLL 118
Query 126 DGCIVETNKNNIMAPIH 142
G + ET+K N++ I
Sbjct 119 GGEVQETSKKNVLKAIE 135
> xla:495185 ap1s2; adaptor-related protein complex 1, sigma 2
subunit; K12394 AP-1 complex subunit sigma 1/2
Length=160
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 93/137 (67%), Gaps = 2/137 (1%)
Query 6 IRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYRR 65
++F+L+ ++QG+ RL ++Y L E+ + EL++ L+R CSF+++R K+VY+R
Sbjct 1 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR 60
Query 66 YASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMIT 125
YASLYF + D+ NEL LE+IH VE LD++F +VCELDI+F+ EKA+FI+ E +
Sbjct 61 YASLYFCCAVEDQD--NELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLL 118
Query 126 DGCIVETNKNNIMAPIH 142
G + ET+K N++ I
Sbjct 119 GGEVQETSKKNVLKAIE 135
> mmu:252903 Ap1s3, 1190009B22, Jr2, [s]3A; adaptor-related protein
complex AP-1, sigma 3; K12395 AP-1 complex subunit sigma-3
Length=154
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 90/137 (65%), Gaps = 2/137 (1%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
MI F+L+ ++QG+ RL ++Y L ER + ++I+ LSR SFI +++ K+VY+
Sbjct 1 MIHFILLFSRQGKLRLQKWYTTLPDKERKKITRDIIQTVLSRGHRTSSFIDWKELKLVYK 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
RYASLYF + E + NEL LE++H VE LD++F NVCELDI+F+ EKA+FI+ E I
Sbjct 61 RYASLYFCCAI--ENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFI 118
Query 125 TDGCIVETNKNNIMAPI 141
G I ET+K + I
Sbjct 119 IGGEIQETSKKTAVKAI 135
> xla:399079 ap1s1, ap19, claps1, sigma1a; adaptor-related protein
complex 1, sigma 1 subunit; K12394 AP-1 complex subunit
sigma 1/2
Length=157
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 94/137 (68%), Gaps = 2/137 (1%)
Query 6 IRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYRR 65
+RF+L+ ++QG+ RL ++Y + ++ L +L++ LSR CSF++++ +KVVY+R
Sbjct 1 MRFMLLFSRQGKLRLQKWYVAIPERDKKKLVRDLMQTVLSRKPKMCSFLEWKDFKVVYKR 60
Query 66 YASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMIT 125
YASLYF + D+ NEL LELIH VE LD++F +VCELDI+F+ EKA+FI+ E +
Sbjct 61 YASLYFCCAVEDQD--NELLTLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLM 118
Query 126 DGCIVETNKNNIMAPIH 142
G I +T+K +++ I
Sbjct 119 GGEIQDTSKKSVLKAIE 135
> ath:AT1G47830 clathrin coat assembly protein, putative; K11827
AP-2 complex subunit sigma-1
Length=142
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 95/142 (66%), Gaps = 2/142 (1%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
MIRF+L+ N+QG+TRL++YY LE SE+ +E E+ R ++R +F+++R +KV+YR
Sbjct 1 MIRFILLQNRQGKTRLAKYYVPLEESEKHKVEYEVHRLVVNRDAKFTNFVEFRTHKVIYR 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
RYA L+F V + + NELA LE IH VE LD FF NVCELD++F+ K + I+ E I
Sbjct 61 RYAGLFFSVCV--DITDNELAYLESIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFI 118
Query 125 TDGCIVETNKNNIMAPIHMLEK 146
G + ET+K I+ + LEK
Sbjct 119 LAGELQETSKRAIIERMSELEK 140
> dre:550415 ap1s3a, zgc:112172; adaptor-related protein complex
1, sigma 3 subunit, a
Length=154
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 93/141 (65%), Gaps = 2/141 (1%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
M+RF+L+ ++QG+ RL +++ L ++ + +L + LSR C+F+ +R K+VYR
Sbjct 1 MMRFLLLFSRQGKLRLQKWFTVLSDRDKRKIIRDLTQMVLSRPPKACNFLPWRDLKIVYR 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
RYASLYF GL E + NEL L+++H VE LD++F NVCELDI+F+ EKA+FI+ E +
Sbjct 61 RYASLYFCCGL--EQDDNELLTLDILHRYVELLDQYFGNVCELDIIFNFEKAYFILDEFV 118
Query 125 TDGCIVETNKNNIMAPIHMLE 145
G + ET+K ++ I E
Sbjct 119 IGGEVQETSKASVAKSIEEAE 139
> ath:AT2G17380 AP19; AP19; protein binding / protein transporter
Length=161
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 94/133 (70%), Gaps = 2/133 (1%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
MI FVL+V++QG+ RL+++Y ER+ + EL L+R C+FI++R YKVVY+
Sbjct 1 MIHFVLLVSRQGKVRLTKWYSPYTQKERSKVIRELSGVILNRGPKLCNFIEWRGYKVVYK 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
RYASLYF + +DE + NEL +LE+IH VE LDR+F +VCELD++F+ KA++I+ E++
Sbjct 61 RYASLYFCM-CIDEAD-NELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELL 118
Query 125 TDGCIVETNKNNI 137
G + E++K +
Sbjct 119 IAGELQESSKKTV 131
> dre:327237 ap1s2, wu:fb94g06, wu:fd19a08, zgc:65824, zgc:77925;
adaptor-related protein complex 1, sigma 2 subunit; K12394
AP-1 complex subunit sigma 1/2
Length=157
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 93/137 (67%), Gaps = 2/137 (1%)
Query 6 IRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYRR 65
++F+L+ ++QG+ RL ++Y L +++ + E+I+ L+R CSF+++R K+VY+R
Sbjct 1 MQFMLLFSRQGKLRLQKWYVPLSDTQKKKISREVIQMVLARKPKMCSFLEWRDLKIVYKR 60
Query 66 YASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMIT 125
YASLYF + D+ NEL LE+IH VE LD++F +VCELDI+F+ EKA++I+ E I
Sbjct 61 YASLYFCCAVEDQE--NELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYYILDEFIL 118
Query 126 DGCIVETNKNNIMAPIH 142
G ET+K N++ I
Sbjct 119 GGEAQETSKKNVLKAIE 135
> pfa:PF11_0187 clathrin assembly protein AP19, putative
Length=155
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 98/134 (73%), Gaps = 2/134 (1%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
MI FVL++++QG+TRL+++Y L E+A + E + L+R+ C+F+++R+YK+V++
Sbjct 1 MIHFVLLISRQGKTRLAKWYIPLSQKEKAKIIRETSQITLNRTPKLCNFVEWREYKLVFK 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
RYASL+FI +D+ + NEL LE+IH VE LD++F NVCELD++F+ KA++++ E++
Sbjct 61 RYASLFFI-ACIDKGD-NELITLEIIHHYVEILDKYFGNVCELDLIFNFHKAYYLLDEIL 118
Query 125 TDGCIVETNKNNIM 138
G + E++K I+
Sbjct 119 VTGEMQESSKKTIL 132
> ath:AT4G35410 clathrin adaptor complex small chain family protein
Length=162
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 93/133 (69%), Gaps = 2/133 (1%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
MI FVL+V++QG+ RL+++Y ER+ + EL L+R C+F+++R YKVVY+
Sbjct 1 MIHFVLLVSRQGKVRLTKWYSPYAQKERSKVIRELSGVILNRGPKLCNFVEWRGYKVVYK 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
RYASLYF + + + E NEL +LE+IH VE LDR+F +VCELD++F+ KA++I+ E++
Sbjct 61 RYASLYFCMCI--DQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELL 118
Query 125 TDGCIVETNKNNI 137
G + E++K +
Sbjct 119 IAGELQESSKKTV 131
> hsa:130340 AP1S3; adaptor-related protein complex 1, sigma 3
subunit; K12395 AP-1 complex subunit sigma-3
Length=154
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 88/131 (67%), Gaps = 2/131 (1%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
MI F+L+ ++QG+ RL ++Y L ER + E+++ LSR SF+ +++ K+VY+
Sbjct 1 MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYK 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
RYASLYF + E + NEL LE++H VE LD++F NVCELDI+F+ EKA+FI+ E I
Sbjct 61 RYASLYFCCAI--ENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFI 118
Query 125 TDGCIVETNKN 135
G I ET+K
Sbjct 119 IGGEIQETSKK 129
> dre:337771 MGC162858, MGC174667, fj40d12, hm:zewp0159, wu:fj40d12;
zgc:162858
Length=181
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 91/136 (66%), Gaps = 2/136 (1%)
Query 6 IRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYRR 65
++F+L+ ++QG+ RL ++Y L E+ + EL++ L+R CSF+++R K+VY+R
Sbjct 25 MQFMLLFSRQGKLRLQKWYVPLCDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR 84
Query 66 YASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMIT 125
YASLYF + D+ NEL LE+IH VE LD++F +VC LDI+F+ EKA+FI+ E +
Sbjct 85 YASLYFCCAIEDQD--NELITLEIIHRYVELLDKYFGSVCGLDIIFNFEKAYFILDEFLL 142
Query 126 DGCIVETNKNNIMAPI 141
G ET+K N++ I
Sbjct 143 GGEAQETSKKNVLKAI 158
> dre:447897 ap1s3b, zgc:101676; adaptor-related protein complex
1, sigma 3 subunit, b; K12395 AP-1 complex subunit sigma-3
Length=154
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 90/137 (65%), Gaps = 2/137 (1%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
M+ F+L+ ++QG+ RL +++ L +R + ++ L+R C+F+ ++ K+VY+
Sbjct 1 MMHFLLLFSRQGKLRLQKWFLPLPERDRKKIVKDMTTMVLARKPRTCNFMHWKDLKIVYK 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
RYASLYF GL E + NEL LE++H VE LD++F NVCELDI+F+ EKA+FI+ E +
Sbjct 61 RYASLYFCCGL--ENQDNELLALEILHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFL 118
Query 125 TDGCIVETNKNNIMAPI 141
G I ET+K +I I
Sbjct 119 MGGEIQETSKQSIAKSI 135
> cel:F29G9.3 aps-1; AdaPtin, Small chain (clathrin associated
complex) family member (aps-1); K12394 AP-1 complex subunit
sigma 1/2
Length=157
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 91/137 (66%), Gaps = 2/137 (1%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
M++++L+ ++QG+ RL ++Y ++ + ELI + L+R C+F++Y+ KVVY+
Sbjct 1 MMQYMLLFSRQGKLRLQKWYTAYPDKQKKKICRELITQILARKPKMCAFLEYKDLKVVYK 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
RYASLYF + E NEL LE+IH VE LD++F +VCELDI+F+ EKA+FI+ E +
Sbjct 61 RYASLYFCCAI--EQNDNELITLEVIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFL 118
Query 125 TDGCIVETNKNNIMAPI 141
G I ET+K ++ I
Sbjct 119 LAGEIQETSKKQVLKAI 135
> tpv:TP01_0754 clathrin assembly protein
Length=152
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 94/134 (70%), Gaps = 2/134 (1%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
MI+F + +N+Q + RL +++ + E++++ +L ++RS QC+F+++R+YKVV++
Sbjct 1 MIKFFISLNRQSKVRLVRWFIPVTSKEKSSIIQDLSHMVVNRSLKQCNFLEWREYKVVFK 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
R+ASLYFI + + + NEL +LE+I VE LD +F NVCELD++F+ KA+ ++ E++
Sbjct 61 RFASLYFIACV--DKDANELLVLEMIQRYVEILDSYFCNVCELDLVFNFTKAYHLLDEIL 118
Query 125 TDGCIVETNKNNIM 138
DG I +TNK I+
Sbjct 119 IDGDIYDTNKKGIL 132
> cpv:cgd8_4040 Aps1p/AP17 like clathrin adaptor protein
Length=201
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 89/130 (68%), Gaps = 2/130 (1%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
M RF L++++QG+TRL ++Y + SER E+ + ++R C+FI ++ + +V +
Sbjct 20 MFRFFLLISRQGKTRLEKWYSSYQQSERKRFIKEVTQMIINRQGKLCNFIDWKGHTLVVK 79
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
RYASLYF V +D+ + NEL LE+IH VE LDR+F NVCELD++F+ KA+FI+ E+I
Sbjct 80 RYASLYF-VACIDKND-NELLALEIIHHYVEVLDRYFGNVCELDLIFNFHKAYFILDEII 137
Query 125 TDGCIVETNK 134
G I E++K
Sbjct 138 LAGEIEESSK 147
> bbo:BBOV_IV010890 23.m06432; clathrin assembly protein small
subunit
Length=155
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 95/137 (69%), Gaps = 2/137 (1%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
MI+F + +++Q + RL +++ ++ +R A+ EL ++R+ QC+FI++R K+V+R
Sbjct 1 MIKFFMAISRQCKLRLVKWFVPVDNKDRTAIMRELSHLVVNRNSKQCNFIEWRDDKLVFR 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
RYASLYF++ + + + NEL +LE+I VE LDR+F NVCELD++F++ KA+ I+ EM+
Sbjct 61 RYASLYFVLCV--DRDANELLMLEIIQHYVELLDRYFCNVCELDMVFNVTKAYHILDEML 118
Query 125 TDGCIVETNKNNIMAPI 141
DG + E +K ++ +
Sbjct 119 IDGNLYECSKKAVLRNV 135
> tgo:TGME49_113450 clathrin coat assembly protein AP17, putative
; K11827 AP-2 complex subunit sigma-1
Length=143
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 91/142 (64%), Gaps = 3/142 (2%)
Query 5 MIRFVLMVNKQGQTRLSQYYEF-LEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVY 63
MIRFVL++N+QG+TRLS++YE L E+ +E + L R + + +R Y +VY
Sbjct 1 MIRFVLLLNRQGKTRLSRWYEGGLSDQEKWKVESGVQAAVLQRQRRWANILDFRSYHLVY 60
Query 64 RRYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEM 123
R+YA L F+V +D E N+LA+ E I VE LD++F VCELDI+FH++K +F++ +
Sbjct 61 RQYAGLVFVV-CIDSRE-NDLAVYEGIQLFVEMLDKYFGTVCELDIIFHVDKVYFLLDQF 118
Query 124 ITDGCIVETNKNNIMAPIHMLE 145
I G IV+T+ I++ L+
Sbjct 119 IQAGEIVQTSPKLIVSRAKRLD 140
> cel:Y48G8AL.14 aps-3; AdaPtin, Small chain (clathrin associated
complex) family member (aps-3); K12399 AP-3 complex subunit
sigma
Length=192
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 91/148 (61%), Gaps = 8/148 (5%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSF------IQYRQ 58
MI+ +L++N G+ RL ++Y+ ++ + E + R ++ C+F I
Sbjct 1 MIKAILVINNHGKPRLLKFYQHYPEEKQQQIVRETFQLVSKRDDNVCNFLEGGTLIDGND 60
Query 59 YKVVYRRYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHF 118
Y+++YR YA+LYFI +D E +EL IL+LI VETLDR FENVCELD++FH+++ H
Sbjct 61 YRLIYRHYATLYFIF-CVDSSE-SELGILDLIQVFVETLDRCFENVCELDLIFHVDRVHH 118
Query 119 IISEMITDGCIVETNKNNIMAPIHMLEK 146
I+ E++ G ++ETN N I+ I +K
Sbjct 119 ILGEIVMGGMVLETNMNEILQRIQEQDK 146
> dre:436812 ap3s2, zgc:92795; adaptor-related protein complex
3, sigma 2 subunit; K12399 AP-3 complex subunit sigma
Length=192
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 90/145 (62%), Gaps = 8/145 (5%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSF------IQYRQ 58
MI+ +L+ N G+ RL ++Y++ + + E R ++ C+F I
Sbjct 1 MIKAILIFNNHGKPRLIRFYQYFAEDMQQQIIRETFHLVSKRDDNVCNFLEGGSLIGGSD 60
Query 59 YKVVYRRYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHF 118
YK++YR YA+LYF+ +D E +EL IL+LI VETLD+ FENVCELD++FH++K H+
Sbjct 61 YKLIYRHYATLYFVF-CVDSSE-SELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHY 118
Query 119 IISEMITDGCIVETNKNNIMAPIHM 143
I+ E++ G ++ETN N I+A + +
Sbjct 119 ILQEVVMGGMVLETNMNEIVAQVEL 143
> dre:100334392 adaptor-related protein complex 3, sigma 2 subunit-like;
K12399 AP-3 complex subunit sigma
Length=192
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 90/145 (62%), Gaps = 8/145 (5%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSF------IQYRQ 58
MI+ +L+ N G+ RL ++Y++ + + E R ++ C+F I
Sbjct 1 MIKAILIFNNHGKPRLIRFYQYFAEDMQQQIIRETFHLVSKRDDNVCNFLEGGSLIGGSD 60
Query 59 YKVVYRRYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHF 118
YK++YR YA+LYF+ +D E +EL IL+LI VETLD+ FENVCELD++FH++K H+
Sbjct 61 YKLIYRHYATLYFVF-CVDSSE-SELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHY 118
Query 119 IISEMITDGCIVETNKNNIMAPIHM 143
I+ E++ G ++ETN N I+A + +
Sbjct 119 ILQEVVMGGMVLETNMNEIVAQVEL 143
> mmu:11778 Ap3s2, [s]3B; adaptor-related protein complex 3, sigma
2 subunit; K12399 AP-3 complex subunit sigma
Length=193
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 94/152 (61%), Gaps = 11/152 (7%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSF------IQYRQ 58
MI+ +L+ N G+ RL ++Y+ + + E L R ++ C+F I
Sbjct 1 MIQAILVFNNHGKPRLVRFYQRFPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSD 60
Query 59 YKVVYRRYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHF 118
YK++YR YA+LYF+ +D E +EL IL+LI VETLD+ FENVCELD++FH++K H+
Sbjct 61 YKLIYRHYATLYFVF-CVDSSE-SELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHY 118
Query 119 IISEMITDGCIVETNKNNIMAPI---HMLEKA 147
I+ E++ G ++ETN N I+A I + LEK+
Sbjct 119 ILQEVVMGGMVLETNMNEIVAQIEAQNRLEKS 150
> hsa:10239 AP3S2, AP3S3, FLJ35955, sigma3b; adaptor-related protein
complex 3, sigma 2 subunit; K12399 AP-3 complex subunit
sigma
Length=193
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 94/152 (61%), Gaps = 11/152 (7%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSF------IQYRQ 58
MI+ +L+ N G+ RL ++Y+ + + E L R ++ C+F I
Sbjct 1 MIQAILVFNNHGKPRLVRFYQRFPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSD 60
Query 59 YKVVYRRYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHF 118
YK++YR YA+LYF+ +D E +EL IL+LI VETLD+ FENVCELD++FH++K H+
Sbjct 61 YKLIYRHYATLYFVF-CVDSSE-SELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHY 118
Query 119 IISEMITDGCIVETNKNNIMAPI---HMLEKA 147
I+ E++ G ++ETN N I+A I + LEK+
Sbjct 119 ILQEVVMGGMVLETNMNEIVAQIEAQNRLEKS 150
> mmu:11777 Ap3s1, MGC117528, [s]3A; adaptor-related protein complex
3, sigma 1 subunit; K12399 AP-3 complex subunit sigma
Length=193
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 88/148 (59%), Gaps = 8/148 (5%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSF------IQYRQ 58
MI+ +L+ N G+ RLS++Y+ + + E R E+ C+F I
Sbjct 1 MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSD 60
Query 59 YKVVYRRYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHF 118
K++YR YA+LYF+ +D E +EL IL+LI VETLD+ FENVCELD++FH++K H
Sbjct 61 NKLIYRHYATLYFVF-CVDSSE-SELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHN 118
Query 119 IISEMITDGCIVETNKNNIMAPIHMLEK 146
I++EM+ G ++ETN N I+ I K
Sbjct 119 ILAEMVMGGMVLETNMNEIVTQIDAQNK 146
> hsa:1176 AP3S1, CLAPS3, Sigma3A; adaptor-related protein complex
3, sigma 1 subunit; K12399 AP-3 complex subunit sigma
Length=193
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 88/148 (59%), Gaps = 8/148 (5%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSF------IQYRQ 58
MI+ +L+ N G+ RLS++Y+ + + E R E+ C+F I
Sbjct 1 MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSD 60
Query 59 YKVVYRRYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHF 118
K++YR YA+LYF+ +D E +EL IL+LI VETLD+ FENVCELD++FH++K H
Sbjct 61 NKLIYRHYATLYFVF-CVDSSE-SELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHN 118
Query 119 IISEMITDGCIVETNKNNIMAPIHMLEK 146
I++EM+ G ++ETN N I+ I K
Sbjct 119 ILAEMVMGGMVLETNMNEIVTQIDAQNK 146
> pfa:PFB0805c clathrin coat assembly protein, putative
Length=141
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 88/142 (61%), Gaps = 3/142 (2%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
M+ F+L+ N+QG+TR S++Y ++ +E ++ + ++RS S + Y +K+VYR
Sbjct 1 MLNFILLQNRQGKTRFSKWYINCNEKKQKKIERDINKILINRSRSYANIFVYENFKIVYR 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
YA LYF+V + +E NEL ILE IH + + LD FF NVCELD++F+ ++ +I
Sbjct 61 LYAGLYFVVCIENE---NELYILEFIHFMAQLLDTFFTNVCELDLLFNFHFLYYFFDNII 117
Query 125 TDGCIVETNKNNIMAPIHMLEK 146
G I E N+N I+ I+ ++K
Sbjct 118 LGGYIYEINRNIILDKINKIKK 139
> mmu:232910 Ap2s1, AI043088, MGC62945; adaptor-related protein
complex 2, sigma 1 subunit; K11827 AP-2 complex subunit sigma-1
Length=142
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 87/141 (61%), Gaps = 2/141 (1%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
MIRF+L+ N+ G+TRL+++Y + E+ L E+ R +F+++R +K++YR
Sbjct 1 MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYR 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
RYA LYF + + + N LA LE IH VE L+ +F NVCELD++F+ K + ++ EM
Sbjct 61 RYAGLYFCICV--DVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMF 118
Query 125 TDGCIVETNKNNIMAPIHMLE 145
G I ET++ ++ + ML+
Sbjct 119 LAGEIRETSQTKVLKQLLMLQ 139
> hsa:1175 AP2S1, AP17, AP17-DELTA, CLAPS2; adaptor-related protein
complex 2, sigma 1 subunit; K11827 AP-2 complex subunit
sigma-1
Length=142
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 87/141 (61%), Gaps = 2/141 (1%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
MIRF+L+ N+ G+TRL+++Y + E+ L E+ R +F+++R +K++YR
Sbjct 1 MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYR 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
RYA LYF + + + N LA LE IH VE L+ +F NVCELD++F+ K + ++ EM
Sbjct 61 RYAGLYFCICV--DVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMF 118
Query 125 TDGCIVETNKNNIMAPIHMLE 145
G I ET++ ++ + ML+
Sbjct 119 LAGEIRETSQTKVLKQLLMLQ 139
> dre:100148085 MGC65827, wu:fk78e12; zgc:65827; K11827 AP-2 complex
subunit sigma-1
Length=142
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 87/141 (61%), Gaps = 2/141 (1%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
MIRF+L+ N+ G+TRL+++Y + E+ L E+ R +F+++R +K++YR
Sbjct 1 MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYR 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
RYA LYF + + + N LA LE IH VE L+ +F NVCELD++F+ K + ++ EM
Sbjct 61 RYAGLYFCICV--DVTDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMF 118
Query 125 TDGCIVETNKNNIMAPIHMLE 145
G I ET++ ++ + ML+
Sbjct 119 LAGEIRETSQTKVLKQLLMLQ 139
> xla:447078 ap2s1, MGC85224; adaptor-related protein complex
2, sigma 1 subunit; K11827 AP-2 complex subunit sigma-1
Length=142
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 87/141 (61%), Gaps = 2/141 (1%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQYKVVYR 64
MIRF+L+ N+ G+TRL+++Y + E+ L E+ R +F+++R +K++YR
Sbjct 1 MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYR 60
Query 65 RYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEMI 124
RYA LYF + + + N LA LE IH VE L+ +F NVCELD++F+ K + ++ EM
Sbjct 61 RYAGLYFCICV--DVTDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMF 118
Query 125 TDGCIVETNKNNIMAPIHMLE 145
G I ET++ ++ + ML+
Sbjct 119 LAGEIRETSQTKVLKQLLMLQ 139
> xla:379829 ap3s1, MGC52794; adaptor-related protein complex
3, sigma 1 subunit; K12399 AP-3 complex subunit sigma
Length=193
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 86/143 (60%), Gaps = 8/143 (5%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSF------IQYRQ 58
MI+ +L+ N G+ RL ++Y+ + + E R E+ C+F I
Sbjct 1 MIKAILIFNNHGKPRLCKFYQHYSEDTQQQIVRETFHLVSKRDENVCNFLEGGLLIGGSD 60
Query 59 YKVVYRRYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHF 118
K++YR YA+LYF+ +D E +EL IL+LI VETLD+ FENVCELD++FH++K H
Sbjct 61 NKLIYRHYATLYFVF-CVDSSE-SELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHN 118
Query 119 IISEMITDGCIVETNKNNIMAPI 141
I++EM+ G ++ETN N I+ I
Sbjct 119 ILAEMVMGGMVLETNMNEIVTQI 141
> ath:AT3G50860 clathrin adaptor complex small chain family protein;
K12399 AP-3 complex subunit sigma
Length=166
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 94/147 (63%), Gaps = 7/147 (4%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLSRSESQCSFIQYRQY----- 59
MI+ V+M+N QG+ RL+++Y++L V ++ L + SR E+ +F++
Sbjct 1 MIKAVMMMNTQGKPRLAKFYDYLPVEKQQELIRGVFSVLCSRPENVSNFLEIESLFGPDS 60
Query 60 KVVYRRYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFI 119
++VY+ YA+LYF++ + D E NELA+L+LI LVETLD+ F NVCELDI+F+ K H +
Sbjct 61 RLVYKHYATLYFVL-VFDGSE-NELAMLDLIQVLVETLDKCFSNVCELDIVFNYSKMHAV 118
Query 120 ISEMITDGCIVETNKNNIMAPIHMLEK 146
+ E++ G ++ET+ +M + + K
Sbjct 119 LDEIVFGGQVLETSSAEVMKAVEEISK 145
> tgo:TGME49_070370 clathrin-associated adaptor complex small
chain, putative
Length=174
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 93/154 (60%), Gaps = 22/154 (14%)
Query 5 MIRFVLMVNKQGQTRLSQYY-------------------EFLEVSERAALEGELIRKCLS 45
MI F+L+V++QG+ RLS++Y L + ER+ L E + L
Sbjct 1 MIHFLLLVSRQGKVRLSRWYLPPSCSSQGPSSGSEGAFAAGLPMKERSELLREAASRVLQ 60
Query 46 RSESQCSFIQYRQ-YKVVYRRYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENV 104
RS QC+ +++R K+V++RYASL+FI +D E N L LE+IH VE LDR+F NV
Sbjct 61 RSAKQCNVVEWRDDTKLVFKRYASLFFIA-CVDSNE-NALLTLEVIHHFVEILDRYFGNV 118
Query 105 CELDIMFHIEKAHFIISEMITDGCIVETNKNNIM 138
CELD++F+ KA++++ E+I G + ET+K ++
Sbjct 119 CELDLIFNFHKAYYLLDEIICGGELQETSKKAVL 152
> dre:449791 ap3s1, wu:fa92f10, zgc:101869; adaptor-related protein
complex 3, sigma 1 subunit; K12399 AP-3 complex subunit
sigma
Length=193
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 90/142 (63%), Gaps = 10/142 (7%)
Query 5 MIRFVLMVNKQGQTRLSQYYE-FLEVSERAALEGELIRKCLSRSESQCSF------IQYR 57
MI+ +L+ N G+ RLS++YE + E +E+ + E R E+ C+F I
Sbjct 1 MIKAILIFNNHGKPRLSKFYEHYTEDTEQQIIR-ETFHLVSKRDENVCNFLEGGLLIGGS 59
Query 58 QYKVVYRRYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAH 117
K++YR YA+LYF+ +D E +EL IL+LI VETLD+ FENVCELD++FH++K H
Sbjct 60 DNKLIYRHYATLYFVF-CVDSSE-SELGILDLIQVFVETLDKCFENVCELDLIFHMDKVH 117
Query 118 FIISEMITDGCIVETNKNNIMA 139
I++EM+ G ++ETN + I+
Sbjct 118 NILAEMVMGGMVLETNMSEIIT 139
> cel:F02E8.3 aps-2; AdaPtin, Small chain (clathrin associated
complex) family member (aps-2); K11827 AP-2 complex subunit
sigma-1
Length=142
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 88/141 (62%), Gaps = 4/141 (2%)
Query 5 MIRFVLMVNKQGQTRLSQYYEFLEVSERAALEGELIRKCLS-RSESQCSFIQYRQYKVVY 63
MIRF+L+ N+ G+TRL+++Y + E+ L E + C++ R +F+++R +K+VY
Sbjct 1 MIRFILIQNRAGKTRLAKWYMHFDDDEKQKLIEE-VHACVTVRDAKHTNFVEFRNFKIVY 59
Query 64 RRYASLYFIVGLLDEPEVNELAILELIHCLVETLDRFFENVCELDIMFHIEKAHFIISEM 123
RRYA LYF + + + N L LE IH VE L+ +F NVCELD++F+ K + ++ EM
Sbjct 60 RRYAGLYFCICV--DITDNNLYYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEM 117
Query 124 ITDGCIVETNKNNIMAPIHML 144
G I ET++ ++ + ML
Sbjct 118 FLAGEIRETSQTKVLKQLLML 138
Lambda K H
0.326 0.139 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 3003468616
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40