bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_8034_orf1
Length=156
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_067810 Rab 5 (EC:3.1.4.12) 271 5e-73
pfa:PFA_0335w Rab5c; Rab5c, GTPase (EC:3.6.5.2); K07976 Rab fa... 240 1e-63
cpv:cgd3_3150 Rab5 like small GTpase ; K07976 Rab family, other 224 7e-59
xla:380406 rab5c, MGC69022, rab5; RAB5C, member RAS oncogene f... 210 2e-54
mmu:19344 Rab5b, C030027M18Rik; RAB5B, member RAS oncogene fam... 209 4e-54
hsa:5869 RAB5B; RAB5B, member RAS oncogene family; K07888 Ras-... 209 4e-54
mmu:433464 Gm13991, OTTMUSG00000015247; predicted gene 13991 208 5e-54
mmu:19345 Rab5c, AI326010, Rabl; RAB5C, member RAS oncogene fa... 208 5e-54
hsa:5878 RAB5C, MGC117217, MGC138857, RAB5CL, RABL; RAB5C, mem... 208 5e-54
xla:380227 rab5a, MGC130824, MGC53713; RAB5A, member RAS oncog... 207 8e-54
mmu:271457 Rab5a, 2410015H04Rik, AI663973, AU021172; RAB5A, me... 207 9e-54
hsa:5868 RAB5A, RAB5; RAB5A, member RAS oncogene family; K0788... 207 9e-54
cel:F26H9.6 rab-5; RAB family member (rab-5); K07976 Rab famil... 207 1e-53
ath:AT4G19640 ARA7; ARA7; GTP binding; K07976 Rab family, other 207 2e-53
xla:414468 rab5b, MGC81204; RAB5B, member RAS oncogene family;... 205 5e-53
dre:386807 rab5c, wu:fb98b08, wu:fi16g01; RAB5C, member RAS on... 205 5e-53
dre:337737 rab5aa, fj38g08, hm:zehn1144, rab5a, wu:fj38g08; RA... 205 6e-53
bbo:BBOV_IV002910 21.m02829; Ras-related protein Rab-5; K07976... 205 6e-53
dre:405821 rab5b, MGC76978, zgc:76978; RAB5B, member RAS oncog... 204 7e-53
xla:379507 mras, MGC64433, m-ras; muscle RAS oncogene homolog;... 202 3e-52
ath:AT5G45130 RHA1; RHA1 (RAB HOMOLOG 1); GTP binding; K07976 ... 202 3e-52
dre:393945 rab5ab, MGC56644, Rab5a, rab5al, zgc:56644; RAB5A, ... 202 3e-52
tgo:TGME49_019720 Ras family domain-containing protein (EC:3.1... 187 2e-47
ath:AT3G54840 ARA6; ARA6; GTP binding / GTPase; K07976 Rab fam... 184 8e-47
sce:YOR089C VPS21, VPS12, VPT12, YPT21, YPT51; GTPase required... 183 3e-46
sce:YKR014C YPT52; GTPase, similar to Ypt51p and Ypt53p and to... 180 2e-45
mmu:106572 Rab31, 1700093E07Rik, AI415285, Rab22B; RAB31, memb... 172 4e-43
hsa:11031 RAB31, Rab22B; RAB31, member RAS oncogene family; K0... 171 9e-43
dre:100001531 rab22a, MGC101631, im:7136651, zgc:101631; RAB22... 167 1e-41
tpv:TP01_0639 hypothetical protein; K07976 Rab family, other 167 1e-41
dre:568800 RAS-related protein RAB-22A-like; K07892 Ras-relate... 165 5e-41
mmu:19334 Rab22a, 3732413A17Rik, AI662177, AW319644, AW550514,... 164 9e-41
xla:779384 rab31, MGC114793; RAB31, member RAS oncogene family... 162 3e-40
hsa:57403 RAB22A, MGC16770; RAB22A, member RAS oncogene family... 162 5e-40
ath:AT4G39990 RABA4B; RABA4B (RAB GTPASE HOMOLOG A4B); GTP bin... 157 1e-38
sce:YNL093W YPT53; GTPase, similar to Ypt51p and Ypt52p and to... 155 5e-38
mmu:19329 Rab17, AW413472; RAB17, member RAS oncogene family; ... 151 9e-37
cel:C39F7.4 rab-1; RAB family member (rab-1); K07874 Ras-relat... 151 9e-37
ath:AT5G65270 AtRABA4a (Arabidopsis Rab GTPase homolog A4a); G... 150 2e-36
ath:AT5G45750 AtRABA1c (Arabidopsis Rab GTPase homolog A1c); G... 150 2e-36
tgo:TGME49_014770 RAS small GTpase, putative (EC:3.1.4.12); K0... 150 2e-36
ath:AT5G47520 AtRABA5a (Arabidopsis Rab GTPase homolog A5a); G... 149 2e-36
ath:AT3G12160 RABA4D; RABA4D (RAB GTPASE HOMOLOG A4D); GTP bin... 149 4e-36
ath:AT4G18430 AtRABA1e (Arabidopsis Rab GTPase homolog A1e); G... 149 4e-36
tgo:TGME49_058130 Ras family domain-containing protein (EC:3.1... 149 4e-36
ath:AT2G33870 ArRABA1h (Arabidopsis Rab GTPase homolog A1h); G... 149 5e-36
ath:AT1G01200 ATRABA3 (ARABIDOPSIS RAB GTPASE HOMOLOG A3); GTP... 148 5e-36
hsa:64284 RAB17, FLJ12538; RAB17, member RAS oncogene family; ... 148 6e-36
ath:AT5G60860 AtRABA1f (Arabidopsis Rab GTPase homolog A1f); G... 148 8e-36
ath:AT5G47960 ATRABA4C; GTP binding; K07976 Rab family, other 148 9e-36
> tgo:TGME49_067810 Rab 5 (EC:3.1.4.12)
Length=241
Score = 271 bits (694), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 126/154 (81%), Positives = 144/154 (93%), Gaps = 0/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
KLVLLG+TSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSV+LG C+VKFEIWDTAGQER
Sbjct 46 KLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVNLGSCIVKFEIWDTAGQER 105
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
YRSLAPMYYRGAAAAV+VYD ++R+SF+GAKSWV ELQ+++D+S++V+ALAGNK DL+AE
Sbjct 106 YRSLAPMYYRGAAAAVVVYDISNRDSFQGAKSWVQELQSVNDRSNVVIALAGNKEDLAAE 165
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
R V QEAQQYA+E GI F+ETSAKTG NVNELF
Sbjct 166 RQVPKQEAQQYADEHGILFLETSAKTGHNVNELF 199
> pfa:PFA_0335w Rab5c; Rab5c, GTPase (EC:3.6.5.2); K07976 Rab
family, other
Length=214
Score = 240 bits (612), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 110/156 (70%), Positives = 134/156 (85%), Gaps = 1/156 (0%)
Query 1 STKLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQ 60
++KLVLLG+TSVGKSC+VVRFAK+EFYEYQESTIGAAFMTQ +D+G+C +KFEIWDTAGQ
Sbjct 27 NSKLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQLIDIGECTIKFEIWDTAGQ 86
Query 61 ERYRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLS 120
ERYRSLAPMYYRGA+AAVIVYD T+++SFEGAK W+ EL+++ + +++ALAGNK DL
Sbjct 87 ERYRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSVHS-NDIIIALAGNKNDLE 145
Query 121 AERAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
RAV + A+ +A I FIETSAKTGQNVNELF
Sbjct 146 EHRAVDRELAESFANSNNILFIETSAKTGQNVNELF 181
> cpv:cgd3_3150 Rab5 like small GTpase ; K07976 Rab family, other
Length=218
Score = 224 bits (572), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 109/155 (70%), Positives = 131/155 (84%), Gaps = 2/155 (1%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGD-CVVKFEIWDTAGQE 61
KLVLLG+ SVGKSCLVVRF+KDEF+EYQE TIGAAFMTQSV++ D VKFEIWDTAGQE
Sbjct 15 KLVLLGDASVGKSCLVVRFSKDEFHEYQEPTIGAAFMTQSVNVDDDYTVKFEIWDTAGQE 74
Query 62 RYRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSA 121
RYRSLAPMYYRGAAAA++VYD T+ E+F+GAKSW++ELQ I++ + +V+AL GNK DL +
Sbjct 75 RYRSLAPMYYRGAAAAIVVYDITNVETFQGAKSWISELQNINN-NDIVVALVGNKYDLES 133
Query 122 ERAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
R V ++ A+ YA+EKGI ETSAKTG NV ELF
Sbjct 134 SRTVDSETARNYAKEKGILSFETSAKTGYNVQELF 168
> xla:380406 rab5c, MGC69022, rab5; RAB5C, member RAS oncogene
family; K07889 Ras-related protein Rab-5C
Length=215
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/154 (65%), Positives = 125/154 (81%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
KLVLLG ++VGKS LV+RF K +F+EYQESTIGAAF+TQ+V L D VKFEIWDTAGQER
Sbjct 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
Y SLAPMYYRGA AA++VYD T+ E+F AK+WV ELQ + ++V+AL+GNK DLS++
Sbjct 83 YHSLAPMYYRGAQAAIVVYDITNTETFARAKNWVKELQRQAS-PNIVIALSGNKADLSSK 141
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
RAV QEAQ YA++ + F+ETSAKT NVNE+F
Sbjct 142 RAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIF 175
> mmu:19344 Rab5b, C030027M18Rik; RAB5B, member RAS oncogene family;
K07888 Ras-related protein Rab-5B
Length=215
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 101/154 (65%), Positives = 125/154 (81%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
KLVLLG ++VGKS LV+RF K +F+EYQESTIGAAF+TQSV L D VKFEIWDTAGQER
Sbjct 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
Y SLAPMYYRGA AA++VYD T++E+F AK+WV ELQ + S+V+ALAGNK DL+ +
Sbjct 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQAS-PSIVIALAGNKADLANK 140
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
R V+ +EAQ YA++ + F+ETSAKT NVN+LF
Sbjct 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLF 174
> hsa:5869 RAB5B; RAB5B, member RAS oncogene family; K07888 Ras-related
protein Rab-5B
Length=215
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 101/154 (65%), Positives = 125/154 (81%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
KLVLLG ++VGKS LV+RF K +F+EYQESTIGAAF+TQSV L D VKFEIWDTAGQER
Sbjct 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
Y SLAPMYYRGA AA++VYD T++E+F AK+WV ELQ + S+V+ALAGNK DL+ +
Sbjct 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQAS-PSIVIALAGNKADLANK 140
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
R V+ +EAQ YA++ + F+ETSAKT NVN+LF
Sbjct 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLF 174
> mmu:433464 Gm13991, OTTMUSG00000015247; predicted gene 13991
Length=280
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 101/154 (65%), Positives = 125/154 (81%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
KLVLLG ++VGKS LV+RF K +F+EYQESTIGAAF+TQSV L D VKFEIWDTAGQER
Sbjct 87 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 146
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
Y SLAPMYYRGA AA++VYD T++E+F AK+WV ELQ + S+V+ALAGNK DL+ +
Sbjct 147 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQAS-PSIVIALAGNKADLANK 205
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
R V+ +EAQ YA++ + F+ETSAKT NVN+LF
Sbjct 206 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLF 239
> mmu:19345 Rab5c, AI326010, Rabl; RAB5C, member RAS oncogene
family; K07889 Ras-related protein Rab-5C
Length=216
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 100/154 (64%), Positives = 126/154 (81%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
KLVLLG ++VGKS LV+RF K +F+EYQESTIGAAF+TQ+V L D VKFEIWDTAGQER
Sbjct 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
Y SLAPMYYRGA AA++VYD T+ ++F AK+WV ELQ + ++V+ALAGNK DL+++
Sbjct 83 YHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQAS-PNIVIALAGNKADLASK 141
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
RAV+ QEAQ YA++ + F+ETSAKT NVNE+F
Sbjct 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIF 175
> hsa:5878 RAB5C, MGC117217, MGC138857, RAB5CL, RABL; RAB5C, member
RAS oncogene family; K07889 Ras-related protein Rab-5C
Length=216
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 100/154 (64%), Positives = 126/154 (81%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
KLVLLG ++VGKS LV+RF K +F+EYQESTIGAAF+TQ+V L D VKFEIWDTAGQER
Sbjct 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
Y SLAPMYYRGA AA++VYD T+ ++F AK+WV ELQ + ++V+ALAGNK DL+++
Sbjct 83 YHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQAS-PNIVIALAGNKADLASK 141
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
RAV+ QEAQ YA++ + F+ETSAKT NVNE+F
Sbjct 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIF 175
> xla:380227 rab5a, MGC130824, MGC53713; RAB5A, member RAS oncogene
family; K07887 Ras-related protein Rab-5A
Length=216
Score = 207 bits (528), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 101/154 (65%), Positives = 124/154 (80%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
KLVLLG ++VGKS LV+RF K +F+E+QESTIGAAF+TQ+V L D VKFEIWDTAGQER
Sbjct 23 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
Y SLAPMYYRGA AA++VYD T+ ESF AK+WV ELQ + ++V+AL+GNK DLS +
Sbjct 83 YHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQAS-PNIVIALSGNKADLSTK 141
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
RAV QEAQ YA++ + F+ETSAKT NVNE+F
Sbjct 142 RAVDFQEAQAYADDNSLLFMETSAKTSVNVNEIF 175
> mmu:271457 Rab5a, 2410015H04Rik, AI663973, AU021172; RAB5A,
member RAS oncogene family; K07887 Ras-related protein Rab-5A
Length=215
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 100/154 (64%), Positives = 124/154 (80%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
KLVLLG ++VGKS LV+RF K +F+E+QESTIGAAF+TQ+V L D VKFEIWDTAGQER
Sbjct 22 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 81
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
Y SLAPMYYRGA AA++VYD T+ ESF AK+WV ELQ + ++V+AL+GNK DL+ +
Sbjct 82 YHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQAS-PNIVIALSGNKADLANK 140
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
RAV QEAQ YA++ + F+ETSAKT NVNE+F
Sbjct 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIF 174
> hsa:5868 RAB5A, RAB5; RAB5A, member RAS oncogene family; K07887
Ras-related protein Rab-5A
Length=215
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 100/154 (64%), Positives = 124/154 (80%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
KLVLLG ++VGKS LV+RF K +F+E+QESTIGAAF+TQ+V L D VKFEIWDTAGQER
Sbjct 22 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 81
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
Y SLAPMYYRGA AA++VYD T+ ESF AK+WV ELQ + ++V+AL+GNK DL+ +
Sbjct 82 YHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQAS-PNIVIALSGNKADLANK 140
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
RAV QEAQ YA++ + F+ETSAKT NVNE+F
Sbjct 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIF 174
> cel:F26H9.6 rab-5; RAB family member (rab-5); K07976 Rab family,
other
Length=208
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 98/154 (63%), Positives = 125/154 (81%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
KLVLLG ++VGKS LV+RF K +F+EYQESTIGAAF+TQ+V L D +KFEIWDTAGQER
Sbjct 21 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQER 80
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
Y SLAPMYYRGA AA++VYD T++ESF+ AK+WV ELQ + ++VMALAGNK D++ +
Sbjct 81 YHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQAS-PNIVMALAGNKADVANK 139
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
R V+ +EA YAE+ + F+ETSAKT NVN++F
Sbjct 140 RTVEYEEANAYAEDNALLFMETSAKTSMNVNDIF 173
> ath:AT4G19640 ARA7; ARA7; GTP binding; K07976 Rab family, other
Length=200
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/156 (64%), Positives = 122/156 (78%), Gaps = 1/156 (0%)
Query 1 STKLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQ 60
+ KLVLLG+ GKS LV+RF KD+F E+QESTIGAAF +Q++ + D VKFEIWDTAGQ
Sbjct 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69
Query 61 ERYRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLS 120
ERY SLAPMYYRGAAAA+IV+D T++ SFE AK WV ELQA + ++VMALAGNK DL
Sbjct 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PNMVMALAGNKSDLL 128
Query 121 AERAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
R V ++AQ YA+E G+FF+ETSAKT NV E+F
Sbjct 129 DARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIF 164
> xla:414468 rab5b, MGC81204; RAB5B, member RAS oncogene family;
K07888 Ras-related protein Rab-5B
Length=185
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 98/154 (63%), Positives = 126/154 (81%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
KLVLLG ++VGKS LV+RF K +F+E+QESTIGAAF+TQSV L D VKFEIWDTAGQER
Sbjct 22 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
Y SLAPMYYRGA AA++VYD T++E+F AK+WV ELQ + ++V+AL+GNK DL+++
Sbjct 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQAS-PNIVIALSGNKADLTSK 140
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
R V+ +EAQ YA++ + F+ETSAKT NVN+LF
Sbjct 141 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLF 174
> dre:386807 rab5c, wu:fb98b08, wu:fi16g01; RAB5C, member RAS
oncogene family; K07889 Ras-related protein Rab-5C
Length=221
Score = 205 bits (521), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 99/154 (64%), Positives = 124/154 (80%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
KLVLLG ++VGKS LV+RF K +F+EYQESTIGAAF+TQ++ L D VKFEIWDTAGQER
Sbjct 24 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQER 83
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
Y SLAPMYYRGA AA++VYD T+ ++F AK+WV ELQ + ++V+ALAGNK DL+ +
Sbjct 84 YHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQAS-PNIVIALAGNKADLANK 142
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
RAV QEAQ YA++ + F+ETSAKT NVNE+F
Sbjct 143 RAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIF 176
> dre:337737 rab5aa, fj38g08, hm:zehn1144, rab5a, wu:fj38g08;
RAB5A, member RAS oncogene family, a; K07887 Ras-related protein
Rab-5A
Length=216
Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 98/154 (63%), Positives = 124/154 (80%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
KLVLLG ++VGKS LV+RF K +F+E+QESTIGAAF+TQ++ L D VKFEIWDTAGQER
Sbjct 23 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQER 82
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
Y SLAPMYYRGA AA++VYD T+ ESF AK+WV ELQ + ++V+AL+GNK DL+ +
Sbjct 83 YHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQAS-PNIVIALSGNKADLANK 141
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
RAV Q+AQ YA++ + F+ETSAKT NVNE+F
Sbjct 142 RAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIF 175
> bbo:BBOV_IV002910 21.m02829; Ras-related protein Rab-5; K07976
Rab family, other
Length=222
Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 101/154 (65%), Positives = 120/154 (77%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
KLV+LG+TSVGKS LV RF K+ F E+QESTIGAAFMTQSV L DC VKFEIWDTAGQER
Sbjct 34 KLVILGDTSVGKSSLVGRFVKNTFLEFQESTIGAAFMTQSVSLDDCTVKFEIWDTAGQER 93
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
YR+LAPMYYRG++AAVIVYD T RESF+ AK W+ ELQA ++V+ALAGNK+DL +
Sbjct 94 YRTLAPMYYRGSSAAVIVYDITMRESFQQAKGWIQELQAHVG-PNVVLALAGNKVDLDSS 152
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
R V + A+++A F+ETSAK G V ELF
Sbjct 153 REVSREVAEEFAGANNCIFMETSAKNGDMVQELF 186
> dre:405821 rab5b, MGC76978, zgc:76978; RAB5B, member RAS oncogene
family; K07888 Ras-related protein Rab-5B
Length=214
Score = 204 bits (520), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 100/154 (64%), Positives = 123/154 (79%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
KLVLLG+ +VGKS LV+RF K +F E+QE+TIGAAF+ QSV L D VKFEIWDTAGQER
Sbjct 22 KLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQER 81
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
Y SLAPMYYRGA AA++V+D T E+FE AK+WV ELQ + ++V+ALAGNK DL+ +
Sbjct 82 YHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQRQAS-PNIVIALAGNKADLADK 140
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
R V+ +EAQ YAE+ G+ F+ETSAKT NVNELF
Sbjct 141 RLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELF 174
> xla:379507 mras, MGC64433, m-ras; muscle RAS oncogene homolog;
K07888 Ras-related protein Rab-5B
Length=213
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 99/154 (64%), Positives = 123/154 (79%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
KLVLLG+ +VGKS LV+RF K +F E+QE+TIGAAF+ QSV L D VKFEIWDTAGQER
Sbjct 21 KLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQER 80
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
Y SLAPMYYRGA AA++V+D T E+F+ AK+WV ELQ + ++V+ALAGNK DL+ +
Sbjct 81 YHSLAPMYYRGAQAAIVVFDITKPETFDRAKAWVKELQRQAS-PNIVIALAGNKSDLAEK 139
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
R V+ +EAQ YAE+ G+ F+ETSAKT NVNELF
Sbjct 140 RMVEYEEAQTYAEDTGLLFMETSAKTAMNVNELF 173
> ath:AT5G45130 RHA1; RHA1 (RAB HOMOLOG 1); GTP binding; K07976
Rab family, other
Length=200
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/156 (62%), Positives = 120/156 (76%), Gaps = 1/156 (0%)
Query 1 STKLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQ 60
+ KLVLLG+ GKS LV+RF KD+F E+QESTIGAAF +Q++ + D VKFEIWDTAGQ
Sbjct 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69
Query 61 ERYRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLS 120
ERY SLAPMYYRGAAAA+IV+D T++ SFE AK WV ELQA ++VMALAGNK DL
Sbjct 70 ERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQA-QGNPNMVMALAGNKADLL 128
Query 121 AERAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
R V +EA+ YA+E +FF+ETSAKT NV ++F
Sbjct 129 DARKVSAEEAEIYAQENSLFFMETSAKTATNVKDIF 164
> dre:393945 rab5ab, MGC56644, Rab5a, rab5al, zgc:56644; RAB5A,
member RAS oncogene family, b; K07887 Ras-related protein
Rab-5A
Length=216
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 97/154 (62%), Positives = 124/154 (80%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
KLVLLG ++VGKS LV+RF K +F+E+QESTIGAAF+TQ++ L D VKFEIWDTAGQER
Sbjct 23 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQER 82
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
Y SLAPMYYRGA AA++VYD T+ ESF AK+WV ELQ + ++V+ALAGNK DL+ +
Sbjct 83 YHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQAS-PNIVIALAGNKADLANK 141
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
RA+ Q+AQ YA++ + F+ETSAKT NV+E+F
Sbjct 142 RALDFQDAQSYADDNSLLFMETSAKTSMNVSEIF 175
> tgo:TGME49_019720 Ras family domain-containing protein (EC:3.1.4.12)
Length=243
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/156 (60%), Positives = 118/156 (75%), Gaps = 2/156 (1%)
Query 1 STKLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQ 60
S K VLLG+ SVGKS LVVRF K+ F + E+TIGAAF TQ++ + VKFEIWDTAGQ
Sbjct 40 SYKTVLLGDASVGKSSLVVRFVKNTFSDTMETTIGAAFFTQALQVDGRTVKFEIWDTAGQ 99
Query 61 ERYRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLS 120
ER+ SLAPMYYRGAAAA++VYD ++ SF+ A+ WV +LQ +S S++V+ALA NK+DL
Sbjct 100 ERFSSLAPMYYRGAAAAIVVYDQSNMASFDRAQVWVQQLQ-LSGNSNIVIALAANKMDL- 157
Query 121 AERAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
+ V +QYAEE G+ FIETSAKTGQNV +LF
Sbjct 158 PHKQVDLHLGRQYAEENGLLFIETSAKTGQNVQQLF 193
> ath:AT3G54840 ARA6; ARA6; GTP binding / GTPase; K07976 Rab family,
other
Length=193
Score = 184 bits (468), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 89/155 (57%), Positives = 115/155 (74%), Gaps = 2/155 (1%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGD-CVVKFEIWDTAGQE 61
KLVLLG++ VGKSC+V+RF + +F + T+GA+F++Q++ L D VKFEIWDTAGQE
Sbjct 35 KLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQE 94
Query 62 RYRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSA 121
RY +LAP+YYRGA AVIVYD TS ESF+ A+ WV ELQ +VMAL GNK DL
Sbjct 95 RYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQK-HGSPDIVMALVGNKADLHE 153
Query 122 ERAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
+R V T++ + AE+ G+FFIETSAKT N+N+LF
Sbjct 154 KREVPTEDGMELAEKNGMFFIETSAKTADNINQLF 188
> sce:YOR089C VPS21, VPS12, VPT12, YPT21, YPT51; GTPase required
for transport during endocytosis and for correct sorting
of vacuolar hydrolases; localized in endocytic intermediates;
detected in mitochondria; geranylgeranylation required for
membrane association; mammalian Rab5 homolog; K07976 Rab family,
other
Length=210
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/161 (57%), Positives = 117/161 (72%), Gaps = 8/161 (4%)
Query 1 STKLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQ 60
S KLVLLG +VGKS +V+RF ++F E +E TIGAAF+TQ V + + VKFEIWDTAGQ
Sbjct 7 SIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQ 66
Query 61 ERYRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAEL--QAISDQSSLVMALAGNKID 118
ER+ SLAPMYYR A AA++VYD T +SF A+ WV EL QA D +++AL GNKID
Sbjct 67 ERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKD---IIIALVGNKID 123
Query 119 L---SAERAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
+ ER V +E ++ AEEKG+ F ETSAKTG+NVN++F
Sbjct 124 MLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVF 164
> sce:YKR014C YPT52; GTPase, similar to Ypt51p and Ypt53p and
to mammalian rab5; required for vacuolar protein sorting and
endocytosis; K07976 Rab family, other
Length=234
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 120/182 (65%), Gaps = 28/182 (15%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLG--------DCVVKFEI 54
KLVLLG++SVGKS +V RF KD F E +ESTIGAAF++QS+ + D V+KFEI
Sbjct 5 KLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQSITIHPNDGNETKDVVIKFEI 64
Query 55 WDTAGQERYRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAG 114
WDTAGQERY+SLAPMYYR A AA++VYD T +S + A++WV EL+ LV+ L G
Sbjct 65 WDTAGQERYKSLAPMYYRNANAALVVYDITQEDSLQKARNWVDELKNKVGDDDLVIYLLG 124
Query 115 NKIDLSAE--------------------RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNE 154
NK+DL E RA+ T+EA+QYA+E+G+ F E SAKTG+ V E
Sbjct 125 NKVDLCQETPSTETSPDSNEGGDEEQKVRAISTEEAKQYAQEQGLLFREVSAKTGEGVKE 184
Query 155 LF 156
+F
Sbjct 185 IF 186
> mmu:106572 Rab31, 1700093E07Rik, AI415285, Rab22B; RAB31, member
RAS oncogene family; K07892 Ras-related protein Rab-31
Length=195
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 109/154 (70%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
K+ LLG+T VGKS +V RF +D F TIGA+FMT++V G+ + KF IWDTAGQER
Sbjct 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
+ SLAPMYYRG+AAAVIVYD T ++SF K WV EL+ + ++VMA+AGNK DLS
Sbjct 68 FHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPE-NIVMAIAGNKCDLSDI 126
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
R V ++A++YAE G +ETSAK N+ ELF
Sbjct 127 REVPLKDAKEYAESIGAIVVETSAKNAINIEELF 160
> hsa:11031 RAB31, Rab22B; RAB31, member RAS oncogene family;
K07892 Ras-related protein Rab-31
Length=195
Score = 171 bits (433), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 109/154 (70%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
K+ LLG+T VGKS +V RF +D F TIGA+FMT++V G+ + KF IWDTAGQER
Sbjct 8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 67
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
+ SLAPMYYRG+AAAVIVYD T ++SF K WV EL+ + ++VMA+AGNK DLS
Sbjct 68 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPE-NIVMAIAGNKCDLSDI 126
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
R V ++A++YAE G +ETSAK N+ ELF
Sbjct 127 REVPLKDAKEYAESIGAIVVETSAKNAINIEELF 160
> dre:100001531 rab22a, MGC101631, im:7136651, zgc:101631; RAB22A,
member RAS oncogene family; K07891 Ras-related protein
Rab-22A
Length=196
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 109/154 (70%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
K+ LLG+T VGKS +V RF +D F TIGA+FMT++V + + KF IWDTAGQER
Sbjct 7 KVCLLGDTGVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
+R+LAPMYYRG+AAA+IVYD T ESF+ K+WV EL+ ++V+A+AGNK DLS
Sbjct 67 FRALAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQ-HGPPNIVVAIAGNKCDLSDA 125
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
R V ++A+ YA+ FIETSAK N+NE+F
Sbjct 126 REVSEKDAKDYADSIHAIFIETSAKNAININEVF 159
> tpv:TP01_0639 hypothetical protein; K07976 Rab family, other
Length=270
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/137 (61%), Positives = 104/137 (75%), Gaps = 14/137 (10%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIG------------AAFMTQSVDLGDCVV 50
KLV+LG+ SVGKSCLV RF K+ F E+QESTIG AAFMTQ+V L DC V
Sbjct 39 KLVILGDASVGKSCLVGRFVKNTFMEFQESTIGEVINYDFLITILAAFMTQTVKLDDCNV 98
Query 51 KFEIWDTAGQERYRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVM 110
KFEIWDTAGQERYR+LAPMYYRG+AAA+IVYD T ++SF+ AKSW+ EL++ + ++++
Sbjct 99 KFEIWDTAGQERYRTLAPMYYRGSAAAIIVYDITLKDSFDQAKSWIKELKS-HVEPNIIL 157
Query 111 ALAGNKIDLSAERAVKT 127
ALAGNK DL +R V T
Sbjct 158 ALAGNKADLE-DRKVDT 173
> dre:568800 RAS-related protein RAB-22A-like; K07892 Ras-related
protein Rab-31
Length=194
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/154 (53%), Positives = 108/154 (70%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
K+ LLG+T VGKS +V RF +D F TIGA+F+T++V G+ + KF IWDTAGQER
Sbjct 7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPSGNELHKFLIWDTAGQER 66
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
+ SLAPMYYRG+AAAVIVYD T +SF+ K WV EL+ + +V+A+AGNK DL
Sbjct 67 FHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPE-DIVVAIAGNKNDLGDI 125
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
R V T+EA+++AE F+ETSA+ N+ ELF
Sbjct 126 REVPTKEAKEFAESIAAIFMETSARNAVNIEELF 159
> mmu:19334 Rab22a, 3732413A17Rik, AI662177, AW319644, AW550514,
E130120E14Rik, Rab22; RAB22A, member RAS oncogene family;
K07891 Ras-related protein Rab-22A
Length=194
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 82/154 (53%), Positives = 108/154 (70%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
K+ LLG+T VGKS +V RF +D F TIGA+FMT++V + + KF IWDTAGQER
Sbjct 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
+R+LAPMYYRG+AAA+IVYD T E+F K+WV EL+ S+V+A+AGNK DL+
Sbjct 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQ-HGPPSIVVAIAGNKCDLTDV 125
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
R V ++A+ YA+ F+ETSAK N+NELF
Sbjct 126 REVMERDAKDYADSIHAIFVETSAKNAININELF 159
> xla:779384 rab31, MGC114793; RAB31, member RAS oncogene family;
K07891 Ras-related protein Rab-22A
Length=193
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/154 (52%), Positives = 107/154 (69%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
K+ LLG+T VGKS +V RF +D F TIGA+FMT++V + + KF IWDTAGQER
Sbjct 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVPHQNELHKFLIWDTAGQER 66
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
+R+LAPMYYRG+ AA+IVYD T E+F K+WV EL+ ++V+A+AGNK DL+
Sbjct 67 FRALAPMYYRGSTAAIIVYDITKEETFSTLKNWVKELRQ-HGPPNIVVAIAGNKCDLNDV 125
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
R V +EA+ YA+ F+ETSAK N+NELF
Sbjct 126 REVLEKEAKDYADSINAVFVETSAKNAININELF 159
> hsa:57403 RAB22A, MGC16770; RAB22A, member RAS oncogene family;
K07891 Ras-related protein Rab-22A
Length=194
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/154 (52%), Positives = 107/154 (69%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
K+ LLG+T VGKS +V RF +D F TIGA+FMT++V + + KF IWDTAGQER
Sbjct 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
+R+LAPMYYRG+AAA+IVYD T E+F K+WV EL+ ++V+A+AGNK DL
Sbjct 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQ-HGPPNIVVAIAGNKCDLIDV 125
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
R V ++A+ YA+ F+ETSAK N+NELF
Sbjct 126 REVMERDAKDYADSIHAIFVETSAKNAININELF 159
> ath:AT4G39990 RABA4B; RABA4B (RAB GTPASE HOMOLOG A4B); GTP binding;
K07976 Rab family, other
Length=224
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 112/154 (72%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
K+VL+G+++VGKS L+ RFA+DEF ++TIG F T+++ + +K +IWDTAGQER
Sbjct 19 KVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTAGQER 78
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
YR++ YYRGA A++VYD T RE+FE W+ EL+A +D+ ++V+ L GNK DL +
Sbjct 79 YRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADK-NIVIILIGNKSDLEDQ 137
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
RAV T++A+++AE++G+FF+ETSA NV F
Sbjct 138 RAVPTEDAKEFAEKEGLFFLETSALNATNVENSF 171
> sce:YNL093W YPT53; GTPase, similar to Ypt51p and Ypt52p and
to mammalian rab5; required for vacuolar protein sorting and
endocytosis; K07976 Rab family, other
Length=220
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 77/162 (47%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query 1 STKLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQ 60
+ K+VLLG ++VGKS +V+RF D+F E +E TIGAAF+T+ + V+KFEIWDTAGQ
Sbjct 12 TIKVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGAAFLTKRITRDGKVIKFEIWDTAGQ 71
Query 61 ERYRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDL- 119
ER+ LAPMYYR A AA++V+D T+ SF A++WV EL +V+AL GNK+DL
Sbjct 72 ERFAPLAPMYYRNAQAALVVFDVTNEGSFYKAQNWVEELHEKVGH-DIVIALVGNKMDLL 130
Query 120 -----SAERAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
+ RA+K Q E + + + E SAKTG+N+ ++F
Sbjct 131 NNDDENENRAMKAPAVQNLCERENLLYFEASAKTGENIYQIF 172
> mmu:19329 Rab17, AW413472; RAB17, member RAS oncogene family;
K07909 Ras-related protein Rab-17
Length=214
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 106/155 (68%), Gaps = 1/155 (0%)
Query 2 TKLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQE 61
+KLVLLG++SVGK+ L +R+ K +F T+G AF T+ +DLG +K EIWDTAGQE
Sbjct 20 SKLVLLGSSSVGKTSLALRYMKQDFSNVL-PTVGCAFFTKVLDLGSSSLKLEIWDTAGQE 78
Query 62 RYRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSA 121
+Y+S+ +Y+RGA AA++VYD T ++SF A+ W+ +L+ +V+ L GNK DL
Sbjct 79 KYQSVCHLYFRGANAALLVYDITRKDSFHKAQQWLEDLEKEFQPGEVVVMLVGNKTDLGE 138
Query 122 ERAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
ER V QE +++AE K + F+ETSAK V+E+F
Sbjct 139 EREVTFQEGKEFAESKSLLFMETSAKLNYQVSEIF 173
> cel:C39F7.4 rab-1; RAB family member (rab-1); K07874 Ras-related
protein Rab-1A
Length=205
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 106/154 (68%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
KL+L+G++ VGKSCL++RFA D + E STIG F ++++L +K +IWDTAGQER
Sbjct 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
+R++ YYRGA ++VYD T +E+F K W+ E+ + + ++ L GNK DL+A+
Sbjct 73 FRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACE-NVNKLLVGNKCDLTAK 131
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
RAV+TQ AQ YA + GI F+ETSAK+ NV + F
Sbjct 132 RAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAF 165
> ath:AT5G65270 AtRABA4a (Arabidopsis Rab GTPase homolog A4a);
GTP binding; K07976 Rab family, other
Length=226
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 112/154 (72%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
K+VL+G+++VGKS ++ R+A+DEF ++TIG F T+++ + VK +IWDTAGQER
Sbjct 19 KVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTAGQER 78
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
YR++ YYRGA A++VYD T R++F+ W+ EL+A +D+ ++V+ L GNK DL +
Sbjct 79 YRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADK-NIVIILIGNKSDLVDQ 137
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
RA+ T++A+++AE++G+FF+ETSA NV F
Sbjct 138 RAIPTEDAKEFAEKEGLFFLETSAFNATNVESAF 171
> ath:AT5G45750 AtRABA1c (Arabidopsis Rab GTPase homolog A1c);
GTP binding; K07976 Rab family, other
Length=216
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 108/154 (70%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
K+VL+G++ VGKS L+ RF K+EF +STIG F T+S+++ D V+K +IWDTAGQER
Sbjct 15 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQER 74
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
YR++ YYRGA A++VYD T +FE ++W+ EL+ +D + +VM L GNK DL
Sbjct 75 YRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVM-LVGNKSDLRHL 133
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
AV+T++A+ +AE++ ++F+ETSA NV F
Sbjct 134 VAVQTEDAKSFAEKESLYFMETSALEATNVENAF 167
> tgo:TGME49_014770 RAS small GTpase, putative (EC:3.1.4.12);
K07874 Ras-related protein Rab-1A
Length=202
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/156 (47%), Positives = 103/156 (66%), Gaps = 5/156 (3%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
KL+L+G++ VGKSCL++RFA D + E STIG F +++DL VK +IWDTAGQER
Sbjct 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQIWDTAGQER 69
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQ--AISDQSSLVMALAGNKIDLS 120
+R++ YYRGA +IVYD T RESF K+W+ E+ A+ S L L GNK DL+
Sbjct 70 FRTITSSYYRGAHGIIIVYDVTDRESFNNVKNWMMEIDKYAMEGVSKL---LVGNKCDLT 126
Query 121 AERAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
++R V +E +++A+ + FIETSAK NV + F
Sbjct 127 SKRTVTYEEGKEFADSCNMRFIETSAKNAHNVEQAF 162
> ath:AT5G47520 AtRABA5a (Arabidopsis Rab GTPase homolog A5a);
GTP binding; K07976 Rab family, other
Length=221
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 101/154 (65%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
K+VL+G+++VGKS L+ RFA+DEFY +STIG F TQ +D+ +K +IWDTAGQER
Sbjct 16 KIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTAGQER 75
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
+R++ YYRGA A++VYD + R++F W+ EL SD ++V L GNK DL
Sbjct 76 FRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDM-NVVTILVGNKSDLKDL 134
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
R V T E + AE +G+FF+ETSA NV F
Sbjct 135 REVSTAEGKALAEAQGLFFMETSALDSSNVAAAF 168
> ath:AT3G12160 RABA4D; RABA4D (RAB GTPASE HOMOLOG A4D); GTP binding;
K07976 Rab family, other
Length=222
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 110/154 (71%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
K+VL+G+++VGK+ L+ RFA++EF ++TIG F T+++ + + VK +IWDTAGQER
Sbjct 17 KVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQIWDTAGQER 76
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
YR++ YYRGA A++VYD T R+SF+ W+ EL+ +D++ ++M L GNK DL +
Sbjct 77 YRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIM-LIGNKCDLGSL 135
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
RAV T++AQ++A+ + +FF+ETSA NV F
Sbjct 136 RAVPTEDAQEFAQRENLFFMETSALEATNVETAF 169
> ath:AT4G18430 AtRABA1e (Arabidopsis Rab GTPase homolog A1e);
GTP binding; K07976 Rab family, other
Length=217
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 106/154 (68%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
KLVL+G++ VGKS L+ RF ++EF +STIG F T+SV + + ++K ++WDTAGQER
Sbjct 15 KLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDTAGQER 74
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
YR++ YYRGA A++VYD T +FE + W+ EL+ +D + ++M L GNK DL
Sbjct 75 YRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIM-LVGNKADLRHL 133
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
RAV T+EA+ ++E + +FF+ETSA NV + F
Sbjct 134 RAVPTEEARSFSERENMFFMETSALDATNVEQAF 167
> tgo:TGME49_058130 Ras family domain-containing protein (EC:3.1.4.12)
Length=238
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 106/154 (68%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
KLVL+G++ VGKSCL++RF+ D F E +TIG F +++++ + +VK +IWDTAGQER
Sbjct 36 KLVLIGDSGVGKSCLLLRFSDDAFTESYITTIGVDFRFRTINVDNEIVKLQIWDTAGQER 95
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
+R++ YYRGA V+VYD T RESF W+AE+ +++++ + L GNK + + +
Sbjct 96 FRTITSAYYRGADGIVLVYDVTDRESFLHVDEWLAEVNRYANENTCKI-LVGNKCEKADD 154
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
R V +E Q+ AEE GI FIETSAK NV+E F
Sbjct 155 RQVSVEEGQRKAEELGISFIETSAKNAINVDEAF 188
> ath:AT2G33870 ArRABA1h (Arabidopsis Rab GTPase homolog A1h);
GTP binding; K07976 Rab family, other
Length=218
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 103/154 (66%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
K+VL G++ VGKS L+ RF +++F STIG F T+S+ + D +VK +IWDTAGQER
Sbjct 15 KVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDTAGQER 74
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
YR++ YYRGA A++VYD T +FE + W+ EL+ +D ++++M L GNK DL+
Sbjct 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIM-LVGNKADLNHL 133
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
RA+ T+E + +AE + FF+ETSA NV F
Sbjct 134 RAISTEEVKDFAERENTFFMETSALEAINVENAF 167
> ath:AT1G01200 ATRABA3 (ARABIDOPSIS RAB GTPASE HOMOLOG A3); GTP
binding; K07976 Rab family, other
Length=237
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 110/155 (70%), Gaps = 2/155 (1%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
K+V++G+++VGK+ L+ RF +EF +STIG F T+++ L +VK +IWDTAGQER
Sbjct 30 KVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQIWDTAGQER 89
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLS-A 121
YR++ YYRGA A++VYD T R SF+ WV EL+A +D S+++M L GNK DLS
Sbjct 90 YRAVTSAYYRGALGAMVVYDITKRLSFDHVARWVEELRAHADDSAVIM-LVGNKADLSVG 148
Query 122 ERAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
+RAV T++A ++AE + +FF E SA +G NV+E F
Sbjct 149 KRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAF 183
> hsa:64284 RAB17, FLJ12538; RAB17, member RAS oncogene family;
K07909 Ras-related protein Rab-17
Length=212
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 105/154 (68%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
KLVLLG+ SVGKS L +R+ K++F T+G AF T+ VD+G +K EIWDTAGQE+
Sbjct 21 KLVLLGSGSVGKSSLALRYVKNDFKSIL-PTVGCAFFTKVVDVGATSLKLEIWDTAGQEK 79
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
Y S+ +Y+RGA AA++VYD T ++SF A+ W+ +L+ +++ L GNK DLS E
Sbjct 80 YHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLSQE 139
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
R V QE +++A+ + + F+ETSAK V+E+F
Sbjct 140 REVTFQEGKEFADSQKLLFMETSAKLNHQVSEVF 173
> ath:AT5G60860 AtRABA1f (Arabidopsis Rab GTPase homolog A1f);
GTP binding; K07976 Rab family, other
Length=217
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 104/154 (67%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
K+VL+G++ VGKS L+ RF ++EF +STIG F T+S+ + D +VK +IWDTAGQER
Sbjct 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQER 74
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
YR++ YYRGA A++VYD T +FE + W+ EL+ +D +++V+ GNK DL
Sbjct 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD-ANIVIMFVGNKADLRHL 133
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
RAV T++A+ +AE + FF+ETSA NV F
Sbjct 134 RAVSTEDAKAFAERENTFFMETSALESMNVENAF 167
> ath:AT5G47960 ATRABA4C; GTP binding; K07976 Rab family, other
Length=223
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 109/154 (70%), Gaps = 1/154 (0%)
Query 3 KLVLLGNTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGDCVVKFEIWDTAGQER 62
K+VL+G+++VGKS L+ RF+++EF ++TIG F T+++++ +K +IWDTAGQER
Sbjct 17 KVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQIWDTAGQER 76
Query 63 YRSLAPMYYRGAAAAVIVYDTTSRESFEGAKSWVAELQAISDQSSLVMALAGNKIDLSAE 122
YR++ YYRGA A++VYD T R+SF+ W+ EL+ +D++ ++M L GNK DL
Sbjct 77 YRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIM-LIGNKTDLGTL 135
Query 123 RAVKTQEAQQYAEEKGIFFIETSAKTGQNVNELF 156
RAV T++A+++A+ + +FF+ETSA NV F
Sbjct 136 RAVPTEDAKEFAQRENLFFMETSALDSNNVEPSF 169
Lambda K H
0.315 0.128 0.355
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 3451799900
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40