bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_7268_orf1
Length=134
Score E
Sequences producing significant alignments: (Bits) Value
eco:b3162 deaD, csdA, ECK3150, JW5531, mssB, rhlD; ATP-depende... 137 8e-33
eco:b0797 rhlE, ECK0786, JW0781; ATP-dependent RNA helicase; K... 117 1e-26
hsa:9879 DDX46, FLJ25329, KIAA0801, MGC9936, PRPF5, Prp5; DEAD... 117 1e-26
mmu:212880 Ddx46, 2200005K02Rik, 8430438J23Rik, AI325430, AI95... 116 2e-26
dre:321948 ddx46, fb39a03, wu:fb39a03; DEAD (Asp-Glu-Ala-Asp) ... 115 3e-26
sce:YHR065C RRP3; Protein involved in rRNA processing; require... 108 3e-24
dre:286777 ddx54, MGC111908, chunp6913, mgc2835, zgc:111908; D... 108 3e-24
cel:F57B9.6 inf-1; INitiation Factor family member (inf-1); K0... 108 6e-24
cpv:cgd4_3000 Dbp1p, eIF4a-1 family RNA SFII helicase (DEXDC+H... 107 8e-24
ath:AT2G47330 DEAD/DEAH box helicase, putative; K12835 ATP-dep... 107 1e-23
ath:AT4G00660 DEAD/DEAH box helicase, putative 107 1e-23
ath:AT1G20920 DEAD box RNA helicase, putative; K12811 ATP-depe... 106 2e-23
pfa:PFE0925c snrnp protein, putative; K12858 ATP-dependent RNA... 106 2e-23
cel:Y94H6A.5 hypothetical protein; K14808 ATP-dependent RNA he... 106 2e-23
ath:AT3G09620 DEAD/DEAH box helicase, putative 105 3e-23
tpv:TP03_0532 ATP-dependent RNA helicase; K12811 ATP-dependent... 105 3e-23
sce:YDL031W DBP10; Dbp10p (EC:3.6.1.-); K14808 ATP-dependent R... 105 5e-23
mmu:71990 Ddx54, 2410015A15Rik, AI414901, DP97; DEAD (Asp-Glu-... 104 7e-23
dre:30263 vasa, MGC158535, fi24g05, vas, vlg, wu:fi24g05, zgc:... 104 8e-23
ath:AT2G33730 DEAD box RNA helicase, putative; K12858 ATP-depe... 104 8e-23
hsa:79039 DDX54, DP97, MGC2835; DEAD (Asp-Glu-Ala-Asp) box pol... 104 9e-23
ath:AT2G42520 DEAD box RNA helicase, putative; K11594 ATP-depe... 103 1e-22
ath:AT1G77030 ATP binding / ATP-dependent helicase/ RNA bindin... 103 1e-22
ath:AT3G61240 DEAD/DEAH box helicase, putative (RH12); K12614 ... 103 1e-22
xla:379975 ddx3x, MGC52935, pl10; DEAD (Asp-Glu-Ala-Asp) box p... 103 1e-22
xla:397935 an3; ATP dependent RNA helicase (EC:3.6.4.13); K115... 103 2e-22
ath:AT2G45810 DEAD/DEAH box helicase, putative 102 3e-22
eco:b3780 rhlB, ECK3772, JW3753, mmrA?; ATP-dependent RNA heli... 102 3e-22
ath:AT5G63120 ethylene-responsive DEAD box RNA helicase, putat... 102 3e-22
pfa:PFC0915w ATP-dependent RNA Helicase, putative (EC:3.6.1.3)... 102 3e-22
ath:AT3G58570 DEAD box RNA helicase, putative; K11594 ATP-depe... 102 4e-22
ath:AT1G55150 DEAD box RNA helicase, putative (RH20); K12823 A... 102 4e-22
cel:F53H1.1 hypothetical protein; K12811 ATP-dependent RNA hel... 102 4e-22
pfa:PF14_0655 H45; helicase 45; K03257 translation initiation ... 101 5e-22
hsa:8653 DDX3Y, DBY; DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,... 101 6e-22
tpv:TP02_0728 ATP-dependent RNA helicase; K14777 ATP-dependent... 101 6e-22
xla:444634 MGC84147 protein 101 8e-22
cel:Y65B4A.6 hypothetical protein; K13025 ATP-dependent RNA he... 101 8e-22
cel:H20J04.4 hypothetical protein; K14778 ATP-dependent RNA he... 100 8e-22
cel:Y71G12B.8 hypothetical protein; K13181 ATP-dependent RNA h... 100 9e-22
xla:495097 ddx54, MGC132273; DEAD (Asp-Glu-Ala-Asp) box polype... 100 9e-22
cel:F33D11.10 hypothetical protein; K13025 ATP-dependent RNA h... 100 1e-21
xla:432250 ddx47, MGC81303; DEAD (Asp-Glu-Ala-Asp) box polypep... 100 1e-21
ath:AT1G16280 DEAD/DEAH box helicase, putative; K14778 ATP-dep... 100 2e-21
xla:414610 hypothetical protein MGC81500 99.8 2e-21
cpv:cgd8_1820 ATP-dependent RNA helicase ; K12614 ATP-dependen... 99.8 2e-21
sce:YHR169W DBP8; ATPase, putative RNA helicase of the DEAD-bo... 99.4 3e-21
cel:T21G5.3 glh-1; Germ-Line Helicase family member (glh-1) 99.4 3e-21
bbo:BBOV_I004920 19.m02284; DEAD/DEAH box helicase and helicas... 99.4 3e-21
ath:AT3G58510 DEAD box RNA helicase, putative (RH11); K11594 A... 99.0 3e-21
> eco:b3162 deaD, csdA, ECK3150, JW5531, mssB, rhlD; ATP-dependent
RNA helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Length=629
Score = 137 bits (345), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 94/129 (72%), Gaps = 3/129 (2%)
Query 8 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPILE 67
F +LGL L+AL GYE+P+PIQA IP LLNG +D++G AQTG+GKTAAFSLP+L+
Sbjct 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNG-RDVLGMAQTGSGKTAAFSLPLLQ 66
Query 68 NFEAD-KNIQAIVLAPTRELALQVAEEMNSLA-HGKKIRITPVYGGQSIEFQIRQLKKGT 125
N + + K Q +VLAPTRELA+QVAE M + H + + + +YGGQ + Q+R L++G
Sbjct 67 NLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGP 126
Query 126 DIIVGTPGR 134
I+VGTPGR
Sbjct 127 QIVVGTPGR 135
> eco:b0797 rhlE, ECK0786, JW0781; ATP-dependent RNA helicase;
K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Length=454
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 88/134 (65%), Gaps = 8/134 (5%)
Query 8 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPILE 67
F LGLS L+A+A++GY +PTPIQ IPA+L G +D++ AQTGTGKTA F+LP+L+
Sbjct 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEG-RDLMASAQTGTGKTAGFTLPLLQ 61
Query 68 NF-------EADKNIQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQ 120
+ + + ++A++L PTRELA Q+ E + + IR V+GG SI Q+ +
Sbjct 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121
Query 121 LKKGTDIIVGTPGR 134
L+ G D++V TPGR
Sbjct 122 LRGGVDVLVATPGR 135
> hsa:9879 DDX46, FLJ25329, KIAA0801, MGC9936, PRPF5, Prp5; DEAD
(Asp-Glu-Ala-Asp) box polypeptide 46 (EC:3.6.4.13); K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=1031
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 90/136 (66%), Gaps = 7/136 (5%)
Query 5 LEKFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLP 64
++ + + G+S K L +L K GYE+PTPIQ IPA+++G +D+IG A+TG+GKT AF LP
Sbjct 371 IKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSG-RDLIGIAKTGSGKTIAFLLP 429
Query 65 ILENFEADKNIQ------AIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQI 118
+ + ++++ A+++ PTRELALQ+ +E + +R+ VYGG I QI
Sbjct 430 MFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQI 489
Query 119 RQLKKGTDIIVGTPGR 134
+LK+G +IIV TPGR
Sbjct 490 AELKRGAEIIVCTPGR 505
> mmu:212880 Ddx46, 2200005K02Rik, 8430438J23Rik, AI325430, AI957095,
MGC116676, MGC31579, mKIAA0801; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 46 (EC:3.6.4.13); K12811 ATP-dependent RNA
helicase DDX46/PRP5 [EC:3.6.4.13]
Length=1031
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 90/136 (66%), Gaps = 7/136 (5%)
Query 5 LEKFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLP 64
++ + + G+S K L +L K GYE+PTPIQ IPA+++G +D+IG A+TG+GKT AF LP
Sbjct 371 IKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSG-RDLIGIAKTGSGKTIAFLLP 429
Query 65 ILENFEADKNIQ------AIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQI 118
+ + ++++ A+++ PTRELALQ+ +E + +R+ VYGG I QI
Sbjct 430 MFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQI 489
Query 119 RQLKKGTDIIVGTPGR 134
+LK+G +IIV TPGR
Sbjct 490 AELKRGAEIIVCTPGR 505
> dre:321948 ddx46, fb39a03, wu:fb39a03; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 46 (EC:3.6.4.13); K12811 ATP-dependent RNA
helicase DDX46/PRP5 [EC:3.6.4.13]
Length=1018
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 90/137 (65%), Gaps = 9/137 (6%)
Query 5 LEKFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLP 64
++ + + G+S K L AL K YE+PTPIQA IPA+++G +D+IG A+TG+GKT AF LP
Sbjct 339 IKTWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMSG-RDLIGIAKTGSGKTIAFLLP 397
Query 65 ILENF-------EADKNIQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQ 117
+ + EA+ + A+++ PTRELALQ+ +E + +R+ VYGG I Q
Sbjct 398 MFRHILDQRPVGEAEGPL-AVIMTPTRELALQITKECKKFSKSLALRVVCVYGGTGISEQ 456
Query 118 IRQLKKGTDIIVGTPGR 134
I +LK+G +IIV TPGR
Sbjct 457 IAELKRGAEIIVCTPGR 473
> sce:YHR065C RRP3; Protein involved in rRNA processing; required
for maturation of the 35S primary transcript of pre-rRNA
and for cleavage leading to mature 18S rRNA; homologous to
eIF-4a, which is a DEAD box RNA-dependent ATPase with helicase
activity (EC:3.6.1.-); K14777 ATP-dependent RNA helicase
DDX47/RRP3 [EC:3.6.4.13]
Length=501
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 79/133 (59%), Gaps = 2/133 (1%)
Query 3 EKLEKFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFS 62
E E F EL L + ++A Y +PTPIQ+ IP L G DIIG AQTG+GKTAAF+
Sbjct 78 ESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEG-HDIIGLAQTGSGKTAAFA 136
Query 63 LPILENFEADKN-IQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQL 121
+PIL D+ A +LAPTRELA Q+ E +SL +R T + GG ++ Q R L
Sbjct 137 IPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDL 196
Query 122 KKGTDIIVGTPGR 134
+ II+ TPGR
Sbjct 197 MRKPHIIIATPGR 209
> dre:286777 ddx54, MGC111908, chunp6913, mgc2835, zgc:111908;
DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 (EC:3.6.4.13); K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13]
Length=862
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 81/130 (62%), Gaps = 4/130 (3%)
Query 8 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPILE 67
F+ +GLS K + KKGY+ PTPIQ TIP +L+G KD++ A+TG+GKTAAF +P+ E
Sbjct 80 FQSMGLSYPVYKGIMKKGYKVPTPIQRKTIPVILDG-KDVVAMARTGSGKTAAFLVPLFE 138
Query 68 NF---EADKNIQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQLKKG 124
+A +A++L PTRELALQ + L +R + GG S++ Q L +
Sbjct 139 KLKAPQAQTGARALILTPTRELALQTMKFTKELGKFTGLRTALILGGDSMDDQFAALHEN 198
Query 125 TDIIVGTPGR 134
DII+GTPGR
Sbjct 199 PDIIIGTPGR 208
> cel:F57B9.6 inf-1; INitiation Factor family member (inf-1);
K03257 translation initiation factor 4A
Length=402
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 84/131 (64%), Gaps = 2/131 (1%)
Query 5 LEKFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLP 64
+E F ++ L E+ L+ + G+E+P+ IQ I G KD+I QAQ+GTGKTA FS+
Sbjct 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTG-KDVIAQAQSGTGKTATFSVS 86
Query 65 ILENFEA-DKNIQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQLKK 123
IL+ + D ++QA+V+APTRELA Q+ + M++L + I P GG S+ R+L+
Sbjct 87 ILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEA 146
Query 124 GTDIIVGTPGR 134
G ++VGTPGR
Sbjct 147 GIHVVVGTPGR 157
> cpv:cgd4_3000 Dbp1p, eIF4a-1 family RNA SFII helicase (DEXDC+HELICc)
; K11594 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=702
Score = 107 bits (268), Expect = 8e-24, Method: Composition-based stats.
Identities = 62/150 (41%), Positives = 86/150 (57%), Gaps = 18/150 (12%)
Query 2 MEKLEKFREL-GLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAA 60
++ ++ F EL G+ E L + + YE+PTP+Q +IP +LNG +D++ AQTG+GKTAA
Sbjct 196 IKPMQSFMELEGIHEILLDNIRRVKYERPTPVQKFSIPTVLNG-RDLMACAQTGSGKTAA 254
Query 61 FSLPILENFEAD-------------KNIQ---AIVLAPTRELALQVAEEMNSLAHGKKIR 104
F PI+ D K + A+VL+PTRELA+Q EE G IR
Sbjct 255 FLFPIVMKMLNDGPPPTPQQSSLRIKRMAYPVALVLSPTRELAIQTYEESRKFCFGTGIR 314
Query 105 ITPVYGGQSIEFQIRQLKKGTDIIVGTPGR 134
+YGG + QI L +G+DIIV TPGR
Sbjct 315 TNVLYGGSEVRSQIMDLDRGSDIIVATPGR 344
> ath:AT2G47330 DEAD/DEAH box helicase, putative; K12835 ATP-dependent
RNA helicase DDX42 [EC:3.6.4.13]
Length=760
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 86/140 (61%), Gaps = 7/140 (5%)
Query 1 IMEKLEKFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAA 60
+ ++ F + G S + + A+ K+ YE+PT IQ +P +L+G +D+IG A+TG+GKTAA
Sbjct 223 VHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSG-RDVIGIAKTGSGKTAA 281
Query 61 FSLPILEN------FEADKNIQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSI 114
F LP++ + + D+ ++ APTRELA Q+ E + +R++ VYGG S
Sbjct 282 FVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSK 341
Query 115 EFQIRQLKKGTDIIVGTPGR 134
Q ++LK G +I+V TPGR
Sbjct 342 HEQFKELKAGCEIVVATPGR 361
> ath:AT4G00660 DEAD/DEAH box helicase, putative
Length=505
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 85/132 (64%), Gaps = 2/132 (1%)
Query 4 KLEKFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSL 63
K +F + L + L + +KG+E+P+PIQ +IP L G +DI+ +A+ GTGKTAAF +
Sbjct 129 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTG-RDILARAKNGTGKTAAFCI 187
Query 64 PILENFEADKN-IQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQLK 122
P+LE + D N IQA+++ PTRELALQ ++ L KI++ GG S++ I +L
Sbjct 188 PVLEKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLY 247
Query 123 KGTDIIVGTPGR 134
+ ++VGTPGR
Sbjct 248 QPVHLLVGTPGR 259
> ath:AT1G20920 DEAD box RNA helicase, putative; K12811 ATP-dependent
RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=828
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 82/133 (61%), Gaps = 7/133 (5%)
Query 8 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPILE 67
+ + GL+ K L + K YE+P PIQ +P +++G +D IG A+TG+GKT F LP+L
Sbjct 193 WHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSG-RDCIGVAKTGSGKTLGFVLPMLR 251
Query 68 NFEADKNIQA------IVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQL 121
+ + ++A +V+APTREL Q+ ++ + IR PVYGG + QI +L
Sbjct 252 HIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISEL 311
Query 122 KKGTDIIVGTPGR 134
K+GT+I+V TPGR
Sbjct 312 KRGTEIVVCTPGR 324
> pfa:PFE0925c snrnp protein, putative; K12858 ATP-dependent RNA
helicase DDX23/PRP28 [EC:3.6.4.13]
Length=1123
Score = 106 bits (264), Expect = 2e-23, Method: Composition-based stats.
Identities = 61/139 (43%), Positives = 86/139 (61%), Gaps = 10/139 (7%)
Query 5 LEKFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLP 64
+ K+ E LS LKA+ K YE+PTPIQ IP L +D+IG A+TG+GKTAAF LP
Sbjct 697 IRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEM-RDLIGIAETGSGKTAAFVLP 755
Query 65 ILE--------NFEADKN-IQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIE 115
+L +E ++ A+V+AP+RELA+Q+ EE N A R V GG++ E
Sbjct 756 MLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFASYCSCRTVAVVGGRNAE 815
Query 116 FQIRQLKKGTDIIVGTPGR 134
Q +L++G +I++GTPGR
Sbjct 816 AQAFELRRGVEIVIGTPGR 834
> cel:Y94H6A.5 hypothetical protein; K14808 ATP-dependent RNA
helicase DDX54/DBP10 [EC:3.6.4.13]
Length=871
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 83/129 (64%), Gaps = 3/129 (2%)
Query 8 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPILE 67
++++GL KA+ KKG+ QPTPIQ TIP +++G KD++ ++TG+GKTAAF +P+L+
Sbjct 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDG-KDVVAMSRTGSGKTAAFVIPMLQ 84
Query 68 NFEADKN--IQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQLKKGT 125
+ I+A++++PTRELALQ + + L +R + GG IE Q + +
Sbjct 85 KLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENP 144
Query 126 DIIVGTPGR 134
DI++ TPGR
Sbjct 145 DILLATPGR 153
> ath:AT3G09620 DEAD/DEAH box helicase, putative
Length=989
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 82/133 (61%), Gaps = 7/133 (5%)
Query 8 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPILE 67
+ + GL+ K L L K YE+P PIQA +P +++G +D IG A+TG+GKT F LP+L
Sbjct 398 WHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSG-RDCIGVAKTGSGKTLGFVLPMLR 456
Query 68 NFEADKNIQA------IVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQL 121
+ + ++A +V+APTREL Q+ ++ + I PVYGG + QI +L
Sbjct 457 HIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISEL 516
Query 122 KKGTDIIVGTPGR 134
K+GT+I+V TPGR
Sbjct 517 KRGTEIVVCTPGR 529
> tpv:TP03_0532 ATP-dependent RNA helicase; K12811 ATP-dependent
RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=894
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 84/137 (61%), Gaps = 9/137 (6%)
Query 5 LEKFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLP 64
+ F + GL + LK L K+ YE+P PIQ IPAL+ G +D+IG A+TG+GKT AF LP
Sbjct 416 ISSFSQCGLPDPILKILEKREYEKPFPIQMQCIPALMCG-RDVIGIAETGSGKTLAFLLP 474
Query 65 ILENF-------EADKNIQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQ 117
+ + E+D I +++APTREL +Q++ E + +R VYGG I Q
Sbjct 475 GIRHVLDQPPLRESDGMI-VLIIAPTRELVIQISNECAKFSKSVGLRTLAVYGGAGIGEQ 533
Query 118 IRQLKKGTDIIVGTPGR 134
+ LK+G +I+VGTPGR
Sbjct 534 LNALKRGAEIVVGTPGR 550
> sce:YDL031W DBP10; Dbp10p (EC:3.6.1.-); K14808 ATP-dependent
RNA helicase DDX54/DBP10 [EC:3.6.4.13]
Length=995
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 80/130 (61%), Gaps = 4/130 (3%)
Query 8 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPILE 67
F GLS+ L + +KG+ QPTPIQ TIP +L +DI+G A+TG+GKTAAF LP++E
Sbjct 139 FPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQS-RDIVGMARTGSGKTAAFILPMVE 197
Query 68 NFEADKN---IQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQLKKG 124
++ +A++L+P+RELA+Q A G ++R + GG S+E Q +
Sbjct 198 KLKSHSGKIGARAVILSPSRELAMQTFNVFKDFARGTELRSVLLTGGDSLEEQFGMMMTN 257
Query 125 TDIIVGTPGR 134
D+I+ TPGR
Sbjct 258 PDVIIATPGR 267
> mmu:71990 Ddx54, 2410015A15Rik, AI414901, DP97; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 54 (EC:3.6.4.13); K14808 ATP-dependent
RNA helicase DDX54/DBP10 [EC:3.6.4.13]
Length=874
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 79/130 (60%), Gaps = 4/130 (3%)
Query 8 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPILE 67
F+ +GLS K + KKGY+ PTPIQ TIP +L+G KD++ A+TG+GKTA F LP+ E
Sbjct 97 FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDG-KDVVAMARTGSGKTACFLLPMFE 155
Query 68 NFEADK---NIQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQLKKG 124
+A +A++L+PTRELALQ + L ++ + GG +E Q L +
Sbjct 156 RLKARSAQTGARALILSPTRELALQTMKFTKELGKFTGLKTALILGGDKMEDQFAALHEN 215
Query 125 TDIIVGTPGR 134
DII+ TPGR
Sbjct 216 PDIIIATPGR 225
> dre:30263 vasa, MGC158535, fi24g05, vas, vlg, wu:fi24g05, zgc:109812,
zgc:158535; vasa homolog (EC:3.6.4.13); K13982 probable
ATP-dependent RNA helicase DDX4 [EC:3.6.4.13]
Length=716
Score = 104 bits (259), Expect = 8e-23, Method: Composition-based stats.
Identities = 56/137 (40%), Positives = 83/137 (60%), Gaps = 11/137 (8%)
Query 8 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPILE 67
F E GL + K ++K GY +PTP+Q IP +++ +D++ AQTG+GKTAAF LPIL+
Sbjct 279 FEEAGLCDSLSKNVSKSGYVKPTPVQKHGIP-IISAGRDLMACAQTGSGKTAAFLLPILQ 337
Query 68 NFEAD----------KNIQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQ 117
F D + +AI++APTREL Q+ E A+G +R VYGG + +
Sbjct 338 RFMTDGVAASKFSEIQEPEAIIVAPTRELINQIYLEARKFAYGTCVRPVVVYGGINTGYT 397
Query 118 IRQLKKGTDIIVGTPGR 134
IR++ KG +++ TPGR
Sbjct 398 IREVLKGCNVLCATPGR 414
> ath:AT2G33730 DEAD box RNA helicase, putative; K12858 ATP-dependent
RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Length=733
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 87/139 (62%), Gaps = 10/139 (7%)
Query 5 LEKFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLP 64
+ + E L+ + LKA+ + GY++P+PIQ IP L +D+IG A+TG+GKTAAF LP
Sbjct 312 MRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQ-QRDVIGIAETGSGKTAAFVLP 370
Query 65 ILENFE-----ADKN----IQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIE 115
+L +++N A+V+APTRELA Q+ EE AH R+T + GGQSIE
Sbjct 371 MLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIE 430
Query 116 FQIRQLKKGTDIIVGTPGR 134
Q ++ +G +I++ TPGR
Sbjct 431 EQGLKITQGCEIVIATPGR 449
> hsa:79039 DDX54, DP97, MGC2835; DEAD (Asp-Glu-Ala-Asp) box polypeptide
54 (EC:3.6.4.13); K14808 ATP-dependent RNA helicase
DDX54/DBP10 [EC:3.6.4.13]
Length=882
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 79/130 (60%), Gaps = 4/130 (3%)
Query 8 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPILE 67
F+ +GLS K + KKGY+ PTPIQ TIP +L+G KD++ A+TG+GKTA F LP+ E
Sbjct 98 FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDG-KDVVAMARTGSGKTACFLLPMFE 156
Query 68 NFE---ADKNIQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQLKKG 124
+ A +A++L+PTRELALQ + L ++ + GG +E Q L +
Sbjct 157 RLKTHSAQTGARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDRMEDQFAALHEN 216
Query 125 TDIIVGTPGR 134
DII+ TPGR
Sbjct 217 PDIIIATPGR 226
> ath:AT2G42520 DEAD box RNA helicase, putative; K11594 ATP-dependent
RNA helicase [EC:3.6.4.13]
Length=633
Score = 103 bits (258), Expect = 1e-22, Method: Composition-based stats.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 12/138 (8%)
Query 8 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPILE 67
F E+ L E + + Y +PTP+Q IP LL G +D++ AQTG+GKTAAF PI+
Sbjct 161 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEG-RDLMACAQTGSGKTAAFCFPIIS 219
Query 68 NFEADKNIQ-----------AIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEF 116
D+++Q A++L+PTRELA Q+ +E ++ +++ YGG I
Sbjct 220 GIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQ 279
Query 117 QIRQLKKGTDIIVGTPGR 134
Q+R+L++G DI+V TPGR
Sbjct 280 QLRELERGVDILVATPGR 297
> ath:AT1G77030 ATP binding / ATP-dependent helicase/ RNA binding
/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing
anhydrides / nucleic acid binding; K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13]
Length=891
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 81/130 (62%), Gaps = 4/130 (3%)
Query 8 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPILE 67
F L L A+ KKGY+ PTPIQ T+P +L+G D++ A+TG+GKTAAF +P+LE
Sbjct 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSG-VDVVAMARTGSGKTAAFLIPMLE 88
Query 68 NFEAD---KNIQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQLKKG 124
+ ++A++L+PTR+LA Q + L +R++ + GG S+E Q +L KG
Sbjct 89 KLKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKG 148
Query 125 TDIIVGTPGR 134
D+I+ TPGR
Sbjct 149 PDVIIATPGR 158
> ath:AT3G61240 DEAD/DEAH box helicase, putative (RH12); K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13]
Length=498
Score = 103 bits (258), Expect = 1e-22, Method: Composition-based stats.
Identities = 55/132 (41%), Positives = 82/132 (62%), Gaps = 2/132 (1%)
Query 4 KLEKFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSL 63
K +F + L LK + +KG+E+P+PIQ +IP L G DI+ +A+ GTGKT AF +
Sbjct 122 KGNEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTG-SDILARAKNGTGKTGAFCI 180
Query 64 PILENFEADKN-IQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQLK 122
P+LE + + N IQA++L PTRELALQ ++ L+ I++ GG S+ I +L
Sbjct 181 PVLEKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLH 240
Query 123 KGTDIIVGTPGR 134
+ ++VGTPGR
Sbjct 241 QPVHLLVGTPGR 252
> xla:379975 ddx3x, MGC52935, pl10; DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3, X-linked; K11594 ATP-dependent RNA helicase
[EC:3.6.4.13]
Length=697
Score = 103 bits (257), Expect = 1e-22, Method: Composition-based stats.
Identities = 58/149 (38%), Positives = 87/149 (58%), Gaps = 20/149 (13%)
Query 5 LEKFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLP 64
+E F+++ + E + + Y +PTP+Q IP ++ G +D++ AQTG+GKTAAF LP
Sbjct 220 IECFQDVDMGEIIMGNIQLTRYTRPTPVQKHAIPIII-GKRDLMACAQTGSGKTAAFLLP 278
Query 65 ILENFEAD------KNIQ-------------AIVLAPTRELALQVAEEMNSLAHGKKIRI 105
IL AD K+++ ++VLAPTRELA+Q+ EE A+ ++R
Sbjct 279 ILSQIYADGPGDAMKHLKDNGRYGRRKQFPLSLVLAPTRELAVQIYEEARKFAYRSRVRP 338
Query 106 TPVYGGQSIEFQIRQLKKGTDIIVGTPGR 134
VYGG I QIR L++G ++V TPGR
Sbjct 339 CVVYGGADIGQQIRDLERGCHLLVATPGR 367
> xla:397935 an3; ATP dependent RNA helicase (EC:3.6.4.13); K11594
ATP-dependent RNA helicase [EC:3.6.4.13]
Length=697
Score = 103 bits (256), Expect = 2e-22, Method: Composition-based stats.
Identities = 58/149 (38%), Positives = 85/149 (57%), Gaps = 20/149 (13%)
Query 5 LEKFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLP 64
+E F ++ + E + + Y +PTP+Q IP ++ +D++ AQTG+GKTAAF LP
Sbjct 220 IESFHDVTMGEIIMGNIQLTRYTRPTPVQKHAIPIIIE-KRDLMACAQTGSGKTAAFLLP 278
Query 65 ILENFEAD------KNIQ-------------AIVLAPTRELALQVAEEMNSLAHGKKIRI 105
IL AD K++Q ++VLAPTRELA+Q+ EE A+ ++R
Sbjct 279 ILSQIYADGPGDAMKHLQENGRYGRRKQFPLSLVLAPTRELAVQIYEEARKFAYRSRVRP 338
Query 106 TPVYGGQSIEFQIRQLKKGTDIIVGTPGR 134
VYGG I QIR L++G ++V TPGR
Sbjct 339 CVVYGGADIGQQIRDLERGCHLLVATPGR 367
> ath:AT2G45810 DEAD/DEAH box helicase, putative
Length=528
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 80/129 (62%), Gaps = 2/129 (1%)
Query 7 KFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPIL 66
+F + L L+ + +KG+E+P+PIQ +IP L G DI+ +A+ GTGKT AF +P L
Sbjct 155 EFEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTG-SDILARAKNGTGKTGAFCIPTL 213
Query 67 ENFEADKN-IQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQLKKGT 125
E + + N IQA++L PTRELALQ ++ L+ KI + GG S+ I +L +
Sbjct 214 EKIDPENNVIQAVILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQPV 273
Query 126 DIIVGTPGR 134
++VGTPGR
Sbjct 274 HLLVGTPGR 282
> eco:b3780 rhlB, ECK3772, JW3753, mmrA?; ATP-dependent RNA helicase;
K03732 ATP-dependent RNA helicase RhlB [EC:3.6.4.13]
Length=421
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 82/137 (59%), Gaps = 9/137 (6%)
Query 6 EKFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPI 65
+KF + L K ++AL KKG+ TPIQAL +P L G +D+ GQAQTGTGKT AF
Sbjct 9 QKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAG-RDVAGQAQTGTGKTMAFLTST 67
Query 66 LENFE-----ADKNI---QAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQ 117
AD+ + +A+++APTRELA+Q+ + LA +++ YGG + Q
Sbjct 68 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 127
Query 118 IRQLKKGTDIIVGTPGR 134
++ L+ G DI++GT GR
Sbjct 128 LKVLESGVDILIGTTGR 144
> ath:AT5G63120 ethylene-responsive DEAD box RNA helicase, putative
(RH30)
Length=484
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 82/136 (60%), Gaps = 7/136 (5%)
Query 5 LEKFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLP 64
++ F++ + L+A+AK G+ +PTPIQA P L G +D+IG A+TG+GKT A+ LP
Sbjct 164 MKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKG-RDLIGIAETGSGKTLAYLLP 222
Query 65 ILENFEA------DKNIQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQI 118
L + A D ++LAPTRELA+Q+ EE +R T +YGG QI
Sbjct 223 ALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQI 282
Query 119 RQLKKGTDIIVGTPGR 134
R L++G +I++ TPGR
Sbjct 283 RDLRRGVEIVIATPGR 298
> pfa:PFC0915w ATP-dependent RNA Helicase, putative (EC:3.6.1.3);
K12614 ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13]
Length=433
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 79/129 (61%), Gaps = 2/129 (1%)
Query 7 KFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPIL 66
+F + L + L + +KGYE+P+PIQ +IP L G K+I+ +A+ GTGKTAAF++P+L
Sbjct 61 EFEDYFLKRELLMGIFEKGYEKPSPIQEESIPVALAG-KNILARAKNGTGKTAAFAIPLL 119
Query 67 ENFEADKN-IQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQLKKGT 125
E KN IQ ++L PTRELALQ + + L K++ GG S+ I +L
Sbjct 120 EKCNTHKNFIQGLILVPTRELALQTSAMIKELGKHMKVQCMVTTGGTSLREDIMRLYNVV 179
Query 126 DIIVGTPGR 134
I+ GTPGR
Sbjct 180 HILCGTPGR 188
> ath:AT3G58570 DEAD box RNA helicase, putative; K11594 ATP-dependent
RNA helicase [EC:3.6.4.13]
Length=646
Score = 102 bits (254), Expect = 4e-22, Method: Composition-based stats.
Identities = 53/138 (38%), Positives = 81/138 (58%), Gaps = 12/138 (8%)
Query 8 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPILE 67
F E+ L E + + Y +PTP+Q IP L G +D++ AQTG+GKTAAF PI+
Sbjct 148 FAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAG-RDLMACAQTGSGKTAAFCFPIIS 206
Query 68 NFEADKNIQ-----------AIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEF 116
D++I+ A++L+PTRELA Q+ +E ++ +++ YGG +
Sbjct 207 GIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQ 266
Query 117 QIRQLKKGTDIIVGTPGR 134
QIR+L++G DI+V TPGR
Sbjct 267 QIRELERGVDILVATPGR 284
> ath:AT1G55150 DEAD box RNA helicase, putative (RH20); K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=501
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 86/140 (61%), Gaps = 7/140 (5%)
Query 1 IMEKLEKFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAA 60
I + ++ FR++G + L+ + K G+ +PTPIQ+ P + G +D+IG A+TG+GKT +
Sbjct 94 IPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKG-RDLIGIAETGSGKTLS 152
Query 61 FSLPILENFEADKNIQ------AIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSI 114
+ LP + + A + +VLAPTRELA+Q+ +E + KI+ T +YGG
Sbjct 153 YLLPAIVHVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPK 212
Query 115 EFQIRQLKKGTDIIVGTPGR 134
Q+R L+KG +I++ TPGR
Sbjct 213 GPQVRDLQKGVEIVIATPGR 232
> cel:F53H1.1 hypothetical protein; K12811 ATP-dependent RNA helicase
DDX46/PRP5 [EC:3.6.4.13]
Length=970
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 83/134 (61%), Gaps = 9/134 (6%)
Query 8 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPILE 67
+ + G++ K + L K Y +PT IQA IP++++G +D+IG A+TG+GKT AF LP+
Sbjct 306 WAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSG-RDVIGIAKTGSGKTLAFLLPMFR 364
Query 68 NF-------EADKNIQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQ 120
+ E D I A++LAPTRELA+Q +E N A +++ YGG I QI
Sbjct 365 HILDQPELEEGDGPI-AVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIAD 423
Query 121 LKKGTDIIVGTPGR 134
LK+G +I+V TPGR
Sbjct 424 LKRGAEIVVCTPGR 437
> pfa:PF14_0655 H45; helicase 45; K03257 translation initiation
factor 4A
Length=398
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 82/133 (61%), Gaps = 2/133 (1%)
Query 3 EKLEKFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFS 62
E ++ F LGL+EK L+ + G+E+P+ IQ I +LNG D IGQAQ+GTGKTA F
Sbjct 20 EIVDTFDALGLNEKLLRGIYSYGFEKPSAIQQRGIKPILNG-YDTIGQAQSGTGKTATFV 78
Query 63 LPILENFEADK-NIQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQL 121
+ L+ D QA++LAPTRELA Q+ + + +L K++ GG + I +L
Sbjct 79 ISSLQLINYDYVACQALILAPTRELAQQIQKVVLALGDYLKVKCHACVGGTVVREDIDKL 138
Query 122 KKGTDIIVGTPGR 134
K+G ++VGTPGR
Sbjct 139 KQGVHMVVGTPGR 151
> hsa:8653 DDX3Y, DBY; DEAD (Asp-Glu-Ala-Asp) box polypeptide
3, Y-linked (EC:3.6.4.13); K11594 ATP-dependent RNA helicase
[EC:3.6.4.13]
Length=660
Score = 101 bits (252), Expect = 6e-22, Method: Composition-based stats.
Identities = 57/149 (38%), Positives = 85/149 (57%), Gaps = 20/149 (13%)
Query 5 LEKFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLP 64
+E F ++ + E + + Y +PTP+Q IP ++ G +D++ AQTG+GKTAAF LP
Sbjct 177 IENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIP-IIKGKRDLMACAQTGSGKTAAFLLP 235
Query 65 ILENF------EADKNIQ-------------AIVLAPTRELALQVAEEMNSLAHGKKIRI 105
IL EA K ++ ++VLAPTRELA+Q+ EE ++ ++R
Sbjct 236 ILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRP 295
Query 106 TPVYGGQSIEFQIRQLKKGTDIIVGTPGR 134
VYGG I QIR L++G ++V TPGR
Sbjct 296 CVVYGGADIGQQIRDLERGCHLLVATPGR 324
> tpv:TP02_0728 ATP-dependent RNA helicase; K14777 ATP-dependent
RNA helicase DDX47/RRP3 [EC:3.6.4.13]
Length=470
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 84/128 (65%), Gaps = 2/128 (1%)
Query 8 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPILE 67
F +LG+ + +A + G+++PT IQ IP L+G KDIIG A+TG+GKTAAF++PIL+
Sbjct 43 FEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSG-KDIIGLAETGSGKTAAFTIPILQ 101
Query 68 NF-EADKNIQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQLKKGTD 126
E + + +++LAPTREL+LQ+ E++ SL + + + GG + Q QL K
Sbjct 102 KLLEKPQRLFSLILAPTRELSLQIKEQLISLGSEIGLDVCLILGGLDMVSQALQLSKKPH 161
Query 127 IIVGTPGR 134
IIVG+PGR
Sbjct 162 IIVGSPGR 169
> xla:444634 MGC84147 protein
Length=450
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 7/133 (5%)
Query 8 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPILE 67
F G E+ + + K Y +PTPIQ IP L+G +D+IG A+TG+GKTAAF PIL
Sbjct 253 FAHFGFDEQLMHQIRKSEYTKPTPIQCQGIPVALSG-RDMIGIAKTGSGKTAAFIWPILV 311
Query 68 NFEADKNIQ------AIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQL 121
+ K +Q A+++ PTREL Q+ E +R VYGG S+ Q + L
Sbjct 312 HIMDQKELQPGDGPIAVIVCPTRELCQQIHNECKRFGKAYNLRSVAVYGGGSMWEQAKAL 371
Query 122 KKGTDIIVGTPGR 134
++G +I+V TPGR
Sbjct 372 QEGAEIVVCTPGR 384
> cel:Y65B4A.6 hypothetical protein; K13025 ATP-dependent RNA
helicase [EC:3.6.4.13]
Length=399
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 82/128 (64%), Gaps = 2/128 (1%)
Query 8 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPILE 67
F ++GL E L+ + G+E+P+ IQ IPA+L +D+I QAQ+GTGKTA FS+ +L+
Sbjct 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKA-RDVIAQAQSGTGKTATFSISVLQ 86
Query 68 NFEAD-KNIQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQLKKGTD 126
+ + + QA++L+PTRELA+Q+ + + +L ++ GG ++ IR+L G
Sbjct 87 SLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQH 146
Query 127 IIVGTPGR 134
++ GTPGR
Sbjct 147 VVSGTPGR 154
> cel:H20J04.4 hypothetical protein; K14778 ATP-dependent RNA
helicase DDX49/DBP8 [EC:3.6.4.13]
Length=561
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Query 6 EKFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPI 65
+KF +LG+ + L + TP+QA IP +L G DI+G A+TGTGKT AF++PI
Sbjct 89 KKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGS-DILGCARTGTGKTLAFAIPI 147
Query 66 LENFEAD-KNIQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQLKKG 124
L+ D I A++L PTRELA Q+AE+ +L ++ + + GG+S+ Q R+L +
Sbjct 148 LQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSER 207
Query 125 TDIIVGTPGR 134
++V TPGR
Sbjct 208 PHVVVATPGR 217
> cel:Y71G12B.8 hypothetical protein; K13181 ATP-dependent RNA
helicase DDX27 [EC:3.6.4.13]
Length=763
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query 8 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPILE 67
F ++ LS + LKA + GY PTPIQ IP L G KDI A TGTGKTAAF LPILE
Sbjct 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTG-KDICACAATGTGKTAAFVLPILE 208
Query 68 NF----EADKNIQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQLKK 123
+ + +VL PTRELA+QV + L+ ++ + GG ++ Q L+
Sbjct 209 RMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALRS 268
Query 124 GTDIIVGTPGR 134
G D++V TPGR
Sbjct 269 GPDVVVATPGR 279
> xla:495097 ddx54, MGC132273; DEAD (Asp-Glu-Ala-Asp) box polypeptide
54; K14808 ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13]
Length=846
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 78/130 (60%), Gaps = 4/130 (3%)
Query 8 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPILE 67
F+ +GLS K + KKGY+ PTPIQ +P +L+G KD++ A+TG+GKTA F +P+ E
Sbjct 77 FQSMGLSYPVYKGVMKKGYKVPTPIQRKVVPVILDG-KDVVAMARTGSGKTACFLIPMFE 135
Query 68 NFEADK---NIQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQLKKG 124
+A ++ ++L+PTRELALQ + L ++ + GG +E Q L +
Sbjct 136 KLKAHSAQTGVRGLILSPTRELALQTLKFTKELGKFTGLKTALILGGDRMEDQFAALHEN 195
Query 125 TDIIVGTPGR 134
DII+ TPGR
Sbjct 196 PDIIIATPGR 205
> cel:F33D11.10 hypothetical protein; K13025 ATP-dependent RNA
helicase [EC:3.6.4.13]
Length=399
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 82/128 (64%), Gaps = 2/128 (1%)
Query 8 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPILE 67
F ++GL E L+ + G+E+P+ IQ +PA+L +D+I QAQ+GTGKTA FS+ +L+
Sbjct 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKA-RDVIAQAQSGTGKTATFSISVLQ 86
Query 68 NFEAD-KNIQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQLKKGTD 126
+ + + QA++L+PTRELA+Q+ + + +L ++ GG ++ IR+L G
Sbjct 87 SLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQH 146
Query 127 IIVGTPGR 134
++ GTPGR
Sbjct 147 VVSGTPGR 154
> xla:432250 ddx47, MGC81303; DEAD (Asp-Glu-Ala-Asp) box polypeptide
47; K14777 ATP-dependent RNA helicase DDX47/RRP3 [EC:3.6.4.13]
Length=448
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 84/133 (63%), Gaps = 2/133 (1%)
Query 3 EKLEKFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFS 62
E+ + FR+LG+++ +A + G++QPT IQ IP L G +DIIG A+TG+GKT AF+
Sbjct 16 EEPKTFRDLGVTDVLCEACEQLGWKQPTKIQIEAIPMALQG-RDIIGLAETGSGKTGAFA 74
Query 63 LPILENF-EADKNIQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQL 121
LPIL+ E+ + + A+VL PTRELA Q++E+ +L ++ + GG + Q L
Sbjct 75 LPILQTLLESPQRLYALVLTPTRELAFQISEQFEALGSSIGVKSAVIVGGIDMMSQSLAL 134
Query 122 KKGTDIIVGTPGR 134
K I++ TPGR
Sbjct 135 AKKPHIVIATPGR 147
> ath:AT1G16280 DEAD/DEAH box helicase, putative; K14778 ATP-dependent
RNA helicase DDX49/DBP8 [EC:3.6.4.13]
Length=491
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 2/128 (1%)
Query 8 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPILE 67
F LGL+E ++ + G +PTP+Q +P +L G +D++G AQTG+GKTAAF+LPIL
Sbjct 60 FEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAG-RDVLGLAQTGSGKTAAFALPILH 118
Query 68 NFEAD-KNIQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQLKKGTD 126
D + A+V+ PTRELA Q+AE+ +L +R + + GG + Q L
Sbjct 119 RLAEDPYGVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPH 178
Query 127 IIVGTPGR 134
I++ TPGR
Sbjct 179 IVITTPGR 186
> xla:414610 hypothetical protein MGC81500
Length=317
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 84/133 (63%), Gaps = 2/133 (1%)
Query 3 EKLEKFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFS 62
E+ + FR+LG+++ +A + G++QPT IQ IP L G +DIIG A+TG+GKT AF+
Sbjct 16 EEQKTFRDLGVTDVLCEACEQLGWKQPTKIQIEAIPMALQG-RDIIGLAETGSGKTGAFA 74
Query 63 LPILENF-EADKNIQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQL 121
LPIL+ E+ + + A+VL PTRELA Q++E+ ++ ++ + GG + Q L
Sbjct 75 LPILQTLLESPQRLYALVLTPTRELAFQISEQFEAIGSSIGVKSAVIVGGIDMMSQSLAL 134
Query 122 KKGTDIIVGTPGR 134
K +++ TPGR
Sbjct 135 AKKPHVVIATPGR 147
> cpv:cgd8_1820 ATP-dependent RNA helicase ; K12614 ATP-dependent
RNA helicase DDX6/DHH1 [EC:3.6.4.13]
Length=406
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 77/128 (60%), Gaps = 2/128 (1%)
Query 8 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPILE 67
F + L + L + +KG+E+P+PIQ +IP L G KDI+ +A+ GTGKTAAF +P+LE
Sbjct 35 FEDYFLKRELLMGIYEKGFERPSPIQEESIPVALAG-KDILARAKNGTGKTAAFVIPLLE 93
Query 68 NFEADKNI-QAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQLKKGTD 126
KNI Q ++L PTRELALQ + + L ++ GG S+ I +L
Sbjct 94 KINTKKNIIQGLILVPTRELALQTSSIVKQLGKHINVQCMVSTGGTSLRDDILRLNNPVH 153
Query 127 IIVGTPGR 134
++VGTPGR
Sbjct 154 VLVGTPGR 161
> sce:YHR169W DBP8; ATPase, putative RNA helicase of the DEAD-box
family; component of 90S preribosome complex involved in
production of 18S rRNA and assembly of 40S small ribosomal
subunit; ATPase activity stimulated by association with Esp2p
(EC:3.6.1.-); K14778 ATP-dependent RNA helicase DDX49/DBP8
[EC:3.6.4.13]
Length=431
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 80/131 (61%), Gaps = 2/131 (1%)
Query 5 LEKFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLP 64
+ F+ LGLS+ ++L QPT IQ IP +L G +D IG A+TG+GKT AF+ P
Sbjct 1 MADFKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEG-RDCIGGAKTGSGKTIAFAGP 59
Query 65 ILENFEADKN-IQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQLKK 123
+L + D + + +VL PTRELA+Q+AE+ +L IR++ + GG+SI Q L++
Sbjct 60 MLTKWSEDPSGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSVIVGGESIVQQALDLQR 119
Query 124 GTDIIVGTPGR 134
I+ TPGR
Sbjct 120 KPHFIIATPGR 130
> cel:T21G5.3 glh-1; Germ-Line Helicase family member (glh-1)
Length=763
Score = 99.4 bits (246), Expect = 3e-21, Method: Composition-based stats.
Identities = 58/139 (41%), Positives = 79/139 (56%), Gaps = 11/139 (7%)
Query 6 EKFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPI 65
+ F E L+E K +A GY + TPIQ +P L++ DI+ AQTG+GKTAAF LPI
Sbjct 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALP-LVHQGYDIMACAQTGSGKTAAFLLPI 399
Query 66 LENFEADKNI----------QAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIE 115
+ D N+ + I+L PTRELA Q+ E A+ + I PVYGG ++
Sbjct 400 MTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVG 459
Query 116 FQIRQLKKGTDIIVGTPGR 134
+ Q++KG IIVGT GR
Sbjct 460 YNKGQIEKGATIIVGTVGR 478
> bbo:BBOV_I004920 19.m02284; DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein (EC:3.6.1.-);
K12811 ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=994
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 79/133 (59%), Gaps = 7/133 (5%)
Query 8 FRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPILE 67
F + GL + L L ++ YE+P PIQ IPAL+ G +D++ A+TG+GKT A+ LP +
Sbjct 390 FSQCGLPDPILSLLQRRNYEKPFPIQMQCIPALMCG-RDVLAIAETGSGKTMAYLLPAIR 448
Query 68 N------FEADKNIQAIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQL 121
+ ++ + +++APTRELA Q+ E + L IR VYGG I Q+ L
Sbjct 449 HVLYQPKLRENEGMIVLIIAPTRELASQIGVESSKLCKLVGIRTKAVYGGSPIGEQLNAL 508
Query 122 KKGTDIIVGTPGR 134
K+G +I+ GTPGR
Sbjct 509 KRGVEIVCGTPGR 521
> ath:AT3G58510 DEAD box RNA helicase, putative (RH11); K11594
ATP-dependent RNA helicase [EC:3.6.4.13]
Length=612
Score = 99.0 bits (245), Expect = 3e-21, Method: Composition-based stats.
Identities = 48/120 (40%), Positives = 75/120 (62%), Gaps = 12/120 (10%)
Query 26 YEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLPILENFEADKNIQ--------- 76
Y +PTP+Q IP LL ++D++ AQTG+GKTAAF PI+ D++++
Sbjct 171 YVRPTPVQRHAIPILL-AERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVY 229
Query 77 --AIVLAPTRELALQVAEEMNSLAHGKKIRITPVYGGQSIEFQIRQLKKGTDIIVGTPGR 134
A++L+PTRELA Q+ +E ++ +++ YGG I Q+R+L++G DI+V TPGR
Sbjct 230 PFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGR 289
Lambda K H
0.315 0.135 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2231140792
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40