bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_7015_orf1
Length=87
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_072350 poly(A)+ RNA export protein, putative ; K142... 94.4 9e-20
tpv:TP01_0140 mRNA export protein; K14298 mRNA export factor 88.6 5e-18
bbo:BBOV_IV001150 21.m03073; mRNA export protein; K14298 mRNA ... 85.1 5e-17
cpv:cgd6_4610 mRNA export protein ; K14298 mRNA export factor 75.1 5e-14
xla:399210 rae1/gle2, Rae1; Rae1/Gle2 protein 64.3 9e-11
dre:393973 rae1, MGC56449, zgc:56449, zgc:77723; RAE1 RNA expo... 63.9 1e-10
hsa:8480 RAE1, FLJ30608, MGC117333, MGC126076, MGC126077, MIG1... 63.5 1e-10
mmu:66679 Rae1, 3230401I12Rik, 41, D2Ertd342e, MNRP, MNRP41; R... 63.5 1e-10
xla:100049109 rae1, gle2, mig14, mnrp41, mrnp41; RAE1 RNA expo... 63.5 2e-10
dre:403012 bub3, MGC101571, zgc:101571; BUB3 budding uninhibit... 60.1 2e-09
ath:AT1G80670 transducin family protein / WD-40 repeat family ... 59.3 3e-09
xla:399106 bub3, xbub3; budding uninhibited by benzimidazoles ... 58.9 4e-09
cel:Y54G9A.6 bub-3; yeast BUB homolog family member (bub-3); K... 56.6 2e-08
sce:YER107C GLE2, RAE1; Component of the Nup82 subcomplex of t... 55.1 5e-08
mmu:12237 Bub3, AU019800, AU021329, AU043350, AW146323, C78067... 55.1 5e-08
hsa:9184 BUB3, BUB3L, hBUB3; budding uninhibited by benzimidaz... 55.1 5e-08
ath:AT1G15850 transducin family protein / WD-40 repeat family ... 53.1 2e-07
mmu:102162 Taf5l, 1110005N04Rik, AI849020; TAF5-like RNA polym... 49.7 3e-06
ath:AT4G03020 transducin family protein / WD-40 repeat family ... 48.9 4e-06
hsa:80344 DCAF11, DKFZp779A1629, PRO2389, WDR23; DDB1 and CUL4... 48.9 4e-06
mmu:28199 Dcaf11, 0710008A13Rik, C76035, D14Ucla1, Dacf11, GLO... 48.5 5e-06
dre:567578 dcaf11, MGC110066, wdr23, zgc:110066; ddb1 and cul4... 48.5 6e-06
xla:446524 taf5l, MGC80243; TAF5-like RNA polymerase II, p300/... 47.0 1e-05
ath:AT1G69400 transducin family protein / WD-40 repeat family ... 47.0 1e-05
tgo:TGME49_043740 flagellar WD-repeat protein PF20, putative (... 46.6 2e-05
ath:AT1G49910 WD-40 repeat family protein / mitotic checkpoint... 46.6 2e-05
mmu:110816 Pwp2, 6530411D08Rik, MGC117973, Pwp2h, wdp103; PWP2... 46.2 2e-05
tgo:TGME49_045470 mitotic checkpoint protein BUB3, putative ; ... 46.2 2e-05
xla:734892 hypothetical protein MGC130867; K03130 transcriptio... 45.4 4e-05
dre:777721 wdsub1; zgc:154085 45.4 5e-05
xla:380436 dcaf11, MGC53214, wdr23; DDB1 and CUL4 associated f... 45.1 5e-05
hsa:5822 PWP2, EHOC-17, PWP2H; PWP2 periodic tryptophan protei... 44.7 7e-05
xla:734637 hypothetical protein MGC115367; K14558 periodic try... 44.7 8e-05
cel:ZC302.2 hypothetical protein 43.9 1e-04
bbo:BBOV_II006880 18.m10036; WD domain/ mitotic checkpoint pro... 43.5 2e-04
dre:393827 wdr61, MGC77675, zgc:77675; WD repeat domain 61; K1... 43.1 2e-04
pfa:PFE0540w WD-repeat protein, putative 42.7 3e-04
mmu:140858 Wdr5, 2410008O07Rik, AA408785, AA960360, Big, Big-3... 42.7 3e-04
hsa:11091 WDR5, BIG-3, SWD3; WD repeat domain 5; K14963 COMPAS... 42.7 3e-04
xla:447447 wdr5-b, MGC81485, big-3, swd3, wdr5, xwdr5; WD repe... 42.7 3e-04
xla:446809 wdr5-a, MGC80538, big-3, swd3, xwdr5; WD repeat dom... 42.4 3e-04
dre:406372 wdr5, wu:fk47f04, zgc:56591, zgc:76895; WD repeat d... 42.4 3e-04
xla:379734 tbl3, MGC69179; transducin (beta)-like 3; K14555 U3... 42.4 4e-04
hsa:10607 TBL3, SAZD; transducin (beta)-like 3; K14555 U3 smal... 42.0 5e-04
sce:YLR129W DIP2, UTP12; Dip2p; K14556 U3 small nucleolar RNA-... 42.0 5e-04
ath:AT3G49660 transducin family protein / WD-40 repeat family ... 42.0 5e-04
sce:YAR003W SWD1, CPS50, FUN16, SAF49; Subunit of the COMPASS ... 42.0 5e-04
mmu:382406 Poc1b, 4933430F16Rik, Wdr51b; POC1 centriolar prote... 41.6 6e-04
cel:F10G8.3 npp-17; Nuclear Pore complex Protein family member... 41.6 6e-04
xla:398032 katnb1; katanin p80 (WD repeat containing) subunit B 1 41.6
> tgo:TGME49_072350 poly(A)+ RNA export protein, putative ; K14298
mRNA export factor
Length=375
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 53/79 (67%), Gaps = 0/79 (0%)
Query 9 APILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVIS 68
AP+L FG + L CDK VK YDL + +T QV+ QHD PV VAWNP++ ++++
Sbjct 86 APLLCSTFGPSPNHLFVGCCDKTVKLYDLNASSSTPQVVAQHDQPVCSVAWNPIHNVIVT 145
Query 69 TSWDGAVKMWDGKQPNPVW 87
SWDG V+MWDGKQ PVW
Sbjct 146 ASWDGYVRMWDGKQQQPVW 164
> tpv:TP01_0140 mRNA export protein; K14298 mRNA export factor
Length=359
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 51/83 (61%), Gaps = 0/83 (0%)
Query 5 FTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYK 64
F + AP+L F + L GC V AYDL + +TG VI +H PV+ V W P +
Sbjct 69 FKQDAPVLCSAFSTDSMRLFGGGCTNNVLAYDLNNPSSTGVVIARHQKPVSGVHWIPQFN 128
Query 65 LVISTSWDGAVKMWDGKQPNPVW 87
L++STSWDG V +WDG+Q NPVW
Sbjct 129 LLLSTSWDGGVSLWDGRQENPVW 151
> bbo:BBOV_IV001150 21.m03073; mRNA export protein; K14298 mRNA
export factor
Length=359
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 0/84 (0%)
Query 4 LFTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMY 63
L+ + APIL+ CF D GC V AYDL S TG ++ +HD PV + W Y
Sbjct 67 LYRQEAPILTSCFSDDNTKFFAGGCSNTVMAYDLASRNATGVLVARHDKPVTSIYWVQKY 126
Query 64 KLVISTSWDGAVKMWDGKQPNPVW 87
+++ SWDG V +WDG+Q PVW
Sbjct 127 NALLTASWDGRVCLWDGRQSMPVW 150
> cpv:cgd6_4610 mRNA export protein ; K14298 mRNA export factor
Length=333
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query 5 FTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYK 64
F +AP+L C ++ L + GCD ++K +D+ S ++ Q IG+HD+P++ + W K
Sbjct 54 FQHSAPVLDCAISSDSRYLFSGGCDNELKMHDMSSRQS--QTIGRHDAPISNIFWCDEQK 111
Query 65 LVISTSWDGAVKMWDGKQPNPVW 87
V++ SWD +K W+G+ NP++
Sbjct 112 FVVTGSWDKTIKFWNGQSQNPIY 134
> xla:399210 rae1/gle2, Rae1; Rae1/Gle2 protein
Length=368
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query 7 ETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAW--NPMYK 64
T P+ C+ D + TA CDK K +DL S ++ I QHD+P+ V W P Y
Sbjct 85 HTGPVQDVCWSDDGTKVFTASCDKTAKMWDLNSNQSIQ--IAQHDAPIKTVHWVKAPNYS 142
Query 65 LVISTSWDGAVKMWDGKQPNPV 86
+++ SWD +K WD + PNP+
Sbjct 143 CIMTGSWDKTLKFWDTRSPNPL 164
> dre:393973 rae1, MGC56449, zgc:56449, zgc:77723; RAE1 RNA export
1 homolog (S. pombe); K14298 mRNA export factor
Length=368
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query 7 ETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAW--NPMYK 64
T P+L C+ D + TA CDK K +DL S + I QH+ P+ + W P Y
Sbjct 85 HTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQ--IAQHEGPIRTIHWIKAPNYS 142
Query 65 LVISTSWDGAVKMWDGKQPNPV 86
+++ SWD +K WD + PNP+
Sbjct 143 CIMTGSWDKTLKFWDTRSPNPM 164
> hsa:8480 RAE1, FLJ30608, MGC117333, MGC126076, MGC126077, MIG14,
MRNP41, Mnrp41, dJ481F12.3, dJ800J21.1; RAE1 RNA export
1 homolog (S. pombe); K14298 mRNA export factor
Length=368
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query 7 ETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAW--NPMYK 64
T P+L C+ D + TA CDK K +DL S + I QHD+PV + W P Y
Sbjct 85 HTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ--IAQHDAPVKTIHWIKAPNYS 142
Query 65 LVISTSWDGAVKMWDGKQPNPV 86
V++ SWD +K WD + NP+
Sbjct 143 CVMTGSWDKTLKFWDTRSSNPM 164
> mmu:66679 Rae1, 3230401I12Rik, 41, D2Ertd342e, MNRP, MNRP41;
RAE1 RNA export 1 homolog (S. pombe); K14298 mRNA export factor
Length=368
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query 7 ETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAW--NPMYK 64
T P+L C+ D + TA CDK K +DL S + I QHD+PV + W P Y
Sbjct 85 HTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQ--IAQHDAPVKTIHWIKAPNYS 142
Query 65 LVISTSWDGAVKMWDGKQPNPV 86
V++ SWD +K WD + NP+
Sbjct 143 CVMTGSWDKTLKFWDTRSSNPM 164
> xla:100049109 rae1, gle2, mig14, mnrp41, mrnp41; RAE1 RNA export
1 homolog; K14298 mRNA export factor
Length=368
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query 7 ETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAW--NPMYK 64
T P+L C+ D + TA CDK K +DL S ++ + QH++P+ V W P Y
Sbjct 85 HTGPVLDVCWSDDGTKVFTASCDKTAKMWDLNSNQSIQ--VAQHEAPIKTVHWVKAPNYS 142
Query 65 LVISTSWDGAVKMWDGKQPNPV 86
+++ WD ++K WD + PNP+
Sbjct 143 CIMTGGWDKSLKFWDTRSPNPL 164
> dre:403012 bub3, MGC101571, zgc:101571; BUB3 budding uninhibited
by benzimidazoles 3 homolog (yeast); K02180 cell cycle
arrest protein BUB3
Length=326
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query 5 FTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYK 64
+ AP+L C F D T + G D Q+K +DL + + T ++G HD+P+ V + P
Sbjct 53 YQHLAPVLDCAFSDPTHAW-SGGLDSQLKTHDLNTDQDT--IVGTHDAPIRCVEFCPEVN 109
Query 65 LVISTSWDGAVKMWDGKQP 83
++++ SWD +V++WD + P
Sbjct 110 VLVTGSWDQSVRLWDPRTP 128
> ath:AT1G80670 transducin family protein / WD-40 repeat family
protein; K14298 mRNA export factor
Length=349
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query 10 PILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQ--VIGQHDSPVNFVAWNPMYKLVI 67
P+L + D + + GCDKQ K + L+SG GQ + H+ P+ +AW P L+
Sbjct 74 PVLCSAWKDDGTTVFSGGCDKQAKMWPLLSG---GQPVTVAMHEGPIAAMAWIPGMNLLA 130
Query 68 STSWDGAVKMWDGKQPNPV 86
+ SWD +K WD +Q NPV
Sbjct 131 TGSWDKTLKYWDTRQQNPV 149
> xla:399106 bub3, xbub3; budding uninhibited by benzimidazoles
3 homolog; K02180 cell cycle arrest protein BUB3
Length=330
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query 5 FTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYK 64
+ P+L C F D T + G D Q+K +DL + T V+G HD+P+ V + P
Sbjct 59 YQHAGPVLDCAFYDPTHAW-SGGLDHQLKMHDLNTDGDT--VVGSHDAPIRCVEYCPEVN 115
Query 65 LVISTSWDGAVKMWDGKQP 83
++++ SWD VK+WD + P
Sbjct 116 VIVTGSWDQTVKLWDPRTP 134
> cel:Y54G9A.6 bub-3; yeast BUB homolog family member (bub-3);
K02180 cell cycle arrest protein BUB3
Length=343
Score = 56.6 bits (135), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query 4 LFTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMY 63
+FT P+L+C F ++ G D VK D+ +G G +G H V + +NPM
Sbjct 65 VFTHGKPLLTCTFAGYNKVAF-GGVDHNVKLADIETG--NGTQLGSHALAVRCMEFNPMS 121
Query 64 KLVISTSWDGAVKMWDGK 81
L++S WD +VK+WD +
Sbjct 122 SLIVSGGWDSSVKLWDAR 139
> sce:YER107C GLE2, RAE1; Component of the Nup82 subcomplex of
the nuclear pore complex; required for polyadenylated RNA export
but not for protein import; homologous to S. pombe Rae1p;
K14298 mRNA export factor
Length=365
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query 8 TAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPV---NFVAWNPMY- 63
++P+L + + + + GCD +K YD+ SG+T Q IG H +P+ FV P
Sbjct 80 SSPVLCTRWSNDGTKVASGGCDNALKLYDIASGQT--QQIGMHSAPIKVLRFVQCGPSNT 137
Query 64 KLVISTSWDGAVKMWDGKQPNPV 86
+ +++ SWD +K WD +QP PV
Sbjct 138 ECIVTGSWDKTIKYWDMRQPQPV 160
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 0/30 (0%)
Query 53 PVNFVAWNPMYKLVISTSWDGAVKMWDGKQ 82
PVN +A++P+Y ++ DG WD Q
Sbjct 271 PVNSIAFHPLYGTFVTAGGDGTFNFWDKNQ 300
> mmu:12237 Bub3, AU019800, AU021329, AU043350, AW146323, C78067;
budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae);
K02180 cell cycle arrest protein BUB3
Length=326
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query 5 FTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYK 64
+ T +L C F D T + G D Q+K +DL + + ++G HD+P+ V + P
Sbjct 53 YQHTGAVLDCAFYDPTHAW-SGGLDHQLKMHDLNTDQEN--LVGTHDAPIRCVEYCPEVN 109
Query 65 LVISTSWDGAVKMWDGKQP 83
++++ SWD VK+WD + P
Sbjct 110 VMVTGSWDQTVKLWDPRTP 128
> hsa:9184 BUB3, BUB3L, hBUB3; budding uninhibited by benzimidazoles
3 homolog (yeast); K02180 cell cycle arrest protein BUB3
Length=326
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query 5 FTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYK 64
+ T +L C F D T + G D Q+K +DL + + ++G HD+P+ V + P
Sbjct 53 YQHTGAVLDCAFYDPTHAW-SGGLDHQLKMHDLNTDQEN--LVGTHDAPIRCVEYCPEVN 109
Query 65 LVISTSWDGAVKMWDGKQP 83
++++ SWD VK+WD + P
Sbjct 110 VMVTGSWDQTVKLWDPRTP 128
> ath:AT1G15850 transducin family protein / WD-40 repeat family
protein
Length=140
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query 10 PILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVIST 69
P+L + D + T GCDKQ K + L+SG V HD+P N +AW P L+++
Sbjct 75 PVLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTV-AMHDAPFNQIAWIPGMNLLVTG 133
Query 70 SWDGAVK 76
SWD +K
Sbjct 134 SWDKTLK 140
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 11/88 (12%)
Query 8 TAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQ------HDSPVNFVAWNP 61
T I S F +L+ D QV+ +++ R+ G + + HD PV AW
Sbjct 26 TDSISSLSFSPKADILVATSWDCQVRCWEIT--RSDGSIASEPKVSMSHDQPVLCSAWKD 83
Query 62 MYKLVISTSWDGAVKMW---DGKQPNPV 86
V + D KMW G QP+ V
Sbjct 84 DGTTVFTGGCDKQAKMWPLLSGAQPSTV 111
> mmu:102162 Taf5l, 1110005N04Rik, AI849020; TAF5-like RNA polymerase
II, p300/CBP-associated factor (PCAF)-associated factor;
K03130 transcription initiation factor TFIID subunit 5
Length=589
Score = 49.7 bits (117), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query 1 STSLFT-ETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAW 59
S LFT P+LS F + L +AG D+++K +DL SG ++ G DS + +A+
Sbjct 460 SVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDS-ITSLAF 518
Query 60 NPMYKLVISTSWDGAVKMWD 79
+P L+ S S D +V++WD
Sbjct 519 SPDSGLIASASMDNSVRVWD 538
> ath:AT4G03020 transducin family protein / WD-40 repeat family
protein; K11801 WD repeat-containing protein 23
Length=493
Score = 48.9 bits (115), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query 21 QMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTSWDGAVKMWD 79
+ + T D V YDL+SG V+ H SPV W+P Y +IS+SWDG + W+
Sbjct 414 KYIYTGSNDSSVYIYDLVSGDKVA-VLKHHSSPVRDCNWHPYYPTLISSSWDGDLVKWE 471
> hsa:80344 DCAF11, DKFZp779A1629, PRO2389, WDR23; DDB1 and CUL4
associated factor 11; K11801 WD repeat-containing protein
23
Length=546
Score = 48.9 bits (115), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query 19 TTQMLLTAGCDK-QVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTSWDGAVKM 77
T Q + +GC +V YDL+SG ++ H + V V+W+P + ++S+SWDG +++
Sbjct 451 TGQQFIYSGCSTGKVVVYDLLSGHIVKKLT-NHKACVRDVSWHPFEEKIVSSSWDGNLRL 509
Query 78 WDGKQ 82
W +Q
Sbjct 510 WQYRQ 514
> mmu:28199 Dcaf11, 0710008A13Rik, C76035, D14Ucla1, Dacf11, GLO14,
Wdr23; DDB1 and CUL4 associated factor 11; K11801 WD repeat-containing
protein 23
Length=549
Score = 48.5 bits (114), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query 19 TTQMLLTAGCDK-QVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTSWDGAVKM 77
T Q + +GC +V YDL+SG ++ H + V V+W+P + ++S+SWDG +++
Sbjct 451 TGQQFIYSGCSTGKVVVYDLLSGHIVKKLT-NHKACVRDVSWHPFEEKIVSSSWDGNLRL 509
Query 78 WDGKQ 82
W +Q
Sbjct 510 WQYRQ 514
> dre:567578 dcaf11, MGC110066, wdr23, zgc:110066; ddb1 and cul4
associated factor 11; K11801 WD repeat-containing protein
23
Length=541
Score = 48.5 bits (114), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query 19 TTQMLLTAGCDK-QVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTSWDGAVKM 77
T Q + GC ++ YD+++G + + HD+ V V+W+P ++S+SWDGA+++
Sbjct 455 TGQKFIYTGCSTGKIVIYDVLTGSVVCK-LSNHDACVRDVSWHPYNNNMVSSSWDGAIRL 513
Query 78 WDGKQ 82
W+ Q
Sbjct 514 WEHTQ 518
> xla:446524 taf5l, MGC80243; TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor, 65kDa; K03130
transcription initiation factor TFIID subunit 5
Length=587
Score = 47.0 bits (110), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query 1 STSLFT-ETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAW 59
S LFT P+L+ F + L +AG D+++K +DL SG ++ G D+ ++ + +
Sbjct 458 SVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGTQYKELRGHTDN-ISSLTF 516
Query 60 NPMYKLVISTSWDGAVKMWD 79
+P L+ S S D +V++WD
Sbjct 517 SPDSSLIASASMDNSVRVWD 536
> ath:AT1G69400 transducin family protein / WD-40 repeat family
protein; K02180 cell cycle arrest protein BUB3
Length=314
Score = 47.0 bits (110), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query 9 APILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVIS 68
A +L CCF + + T+G D ++ YDL +G T IG+HD + ++ VIS
Sbjct 55 AALLDCCFENESTSF-TSGSDGFIRRYDLNAG--TVDTIGRHDDISTSIVYSYEKGEVIS 111
Query 69 TSWDGAVKMWDGKQ 82
T +D +K WD +Q
Sbjct 112 TGFDEKIKFWDTRQ 125
> tgo:TGME49_043740 flagellar WD-repeat protein PF20, putative
(EC:2.7.11.7)
Length=610
Score = 46.6 bits (109), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query 5 FTE-TAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMY 63
FT+ + P+ CCF D T D +K +D S R + G DS VN + + P
Sbjct 410 FTDHSKPVWDCCFHDAGDFFATCSADHSIKCFDANSLRCRESLRGHADS-VNSICFQPFT 468
Query 64 KLVISTSWDGAVKMWD 79
+ S S D VK+WD
Sbjct 469 NCLASCSTDKMVKLWD 484
Score = 34.3 bits (77), Expect = 0.095, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query 13 SCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTSWD 72
S CF T L + DK VK +D+ + ++ G H N V +N +V S
Sbjct 461 SICFQPFTNCLASCSTDKMVKLWDMRTASVIRKLSG-HSHSCNDVTFNMQANVVASCDAG 519
Query 73 GAVKMWD 79
G V +WD
Sbjct 520 GVVHVWD 526
Score = 28.9 bits (63), Expect = 3.7, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query 9 APILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVIS 68
A ++S F ++L + D K + + + +G H V+ + +P ++++
Sbjct 331 AAVVSIVFHPQLELLASTSDDGTWKLWQMPAAHLVMSGVG-HTDWVSSASLHPYASVLVT 389
Query 69 TSWDGAVKMWDGKQPN----------PVW 87
S DG VK+W + N PVW
Sbjct 390 ASGDGTVKLWSIAEENCVHTFTDHSKPVW 418
Score = 28.1 bits (61), Expect = 7.4, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query 14 CCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTSWDG 73
C F T + L D VK D I+ T Q + H V V ++P + S DG
Sbjct 546 CAFDITGKALAVGSADGTVKLLD-ITKETLLQNMDGHPDYVLDVRFSPDSSYLCSACADG 604
Query 74 AVKMWD 79
V++W+
Sbjct 605 KVRIWE 610
> ath:AT1G49910 WD-40 repeat family protein / mitotic checkpoint
protein, putative; K02180 cell cycle arrest protein BUB3
Length=339
Score = 46.6 bits (109), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query 5 FTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYK 64
F +L CCF D + + D +V+ D +G+ V+G H+ PV V ++
Sbjct 54 FKHGGAVLDCCFHDDSSGF-SVCADTKVRRIDFNAGKE--DVLGTHEKPVRCVEYSYAAG 110
Query 65 LVISTSWDGAVKMWD 79
VI+ SWD +K WD
Sbjct 111 QVITGSWDKTIKCWD 125
Score = 32.7 bits (73), Expect = 0.25, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 0/28 (0%)
Query 53 PVNFVAWNPMYKLVISTSWDGAVKMWDG 80
PVN +A++P+Y S DG V +WDG
Sbjct 242 PVNAIAFHPIYGTFASGGCDGFVNIWDG 269
> mmu:110816 Pwp2, 6530411D08Rik, MGC117973, Pwp2h, wdp103; PWP2
periodic tryptophan protein homolog (yeast); K14558 periodic
tryptophan protein 2
Length=919
Score = 46.2 bits (108), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query 5 FTETAPI-LSCCFGDTTQMLLTAGCDK--QVKAYDLISGRTTGQVIGQHDSPVNFVAWNP 61
FT P SC D++ +++AG ++ + + +GR V+ H+ PV+ + +NP
Sbjct 453 FTSPRPTQFSCVAVDSSGEIVSAGAQDSFEIFVWSMQTGRLL-DVLSGHEGPVSGLCFNP 511
Query 62 MYKLVISTSWDGAVKMWD 79
M ++ S SWD V++WD
Sbjct 512 MKSILASASWDKTVRLWD 529
> tgo:TGME49_045470 mitotic checkpoint protein BUB3, putative
; K02180 cell cycle arrest protein BUB3
Length=332
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query 5 FTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYK 64
F P+L CF + ++ G DKQV DL + + +G H V ++
Sbjct 50 FEFDMPLLDACFLGDSAKVVIGGLDKQVSLCDLQTEKVVS--LGSHTGAVKHCRYHVPTN 107
Query 65 LVISTSWDGAVKMWDGKQPN 84
LV + WDG VK WD + P
Sbjct 108 LVYTAGWDGIVKAWDPRMPQ 127
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 0/40 (0%)
Query 48 GQHDSPVNFVAWNPMYKLVISTSWDGAVKMWDGKQPNPVW 87
G+ PVN ++++P Y + DG V +WDG+ +W
Sbjct 234 GEVACPVNALSFHPQYGTFATGGSDGGVSVWDGQSKKRLW 273
> xla:734892 hypothetical protein MGC130867; K03130 transcription
initiation factor TFIID subunit 5
Length=588
Score = 45.4 bits (106), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query 1 STSLFT-ETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAW 59
S LFT P+L+ F + L +AG D++++ +DL SG ++ G D+ ++ + +
Sbjct 459 SVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLRLWDLASGTLYKELRGHTDN-ISSLTF 517
Query 60 NPMYKLVISTSWDGAVKMWD 79
+P L+ S S D +V++WD
Sbjct 518 SPDSNLIASGSMDNSVRVWD 537
> dre:777721 wdsub1; zgc:154085
Length=487
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query 3 SLFTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPM 62
+L ++AP+LSC + QML++ DK V Y G + QHD V A++P
Sbjct 234 TLTGQSAPVLSCAYSPDGQMLVSGSVDKTVTVYQADEG-VLLYTLHQHDRYVTACAFSPT 292
Query 63 YKLVISTSWDGAVKMWDGKQ 82
L+ + S D +V +W ++
Sbjct 293 APLIATGSMDKSVNIWRMEE 312
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 0/66 (0%)
Query 14 CCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTSWDG 73
CCF Q L + D + + +G + SPV A++P ++S DG
Sbjct 60 CCFSACGQYLASCSTDATTMVWSMDTGEIEAVLEHPGRSPVRVCAFSPDSSHLVSGGSDG 119
Query 74 AVKMWD 79
++ +WD
Sbjct 120 SIALWD 125
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query 9 APILSCCFGDTTQMLLTAGCDKQVKAYDLISG--RTTGQVIGQHDSPVNFVAWNPMYKLV 66
+P+ C F + L++ G D + +D S R TG V +D+ + ++ P ++
Sbjct 98 SPVRVCAFSPDSSHLVSGGSDGSIALWDFTSRTLRRTGVV---NDTSIVACSFTPCGQMF 154
Query 67 ISTSWDGAVKMWD 79
I+ S G +++WD
Sbjct 155 ITGSTYGDLRLWD 167
> xla:380436 dcaf11, MGC53214, wdr23; DDB1 and CUL4 associated
factor 11; K11801 WD repeat-containing protein 23
Length=525
Score = 45.1 bits (105), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query 19 TTQMLLTAGCDK-QVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTSWDGAVKM 77
T Q + +GC +V YDL++G+ ++ H + V V+W+P ++S+SWDG +++
Sbjct 446 TGQQFVYSGCSTGRVVVYDLLTGQIVKKLT-NHKACVRDVSWHPCDNKLVSSSWDGNLRV 504
Query 78 WDGKQ 82
W+ +Q
Sbjct 505 WEYRQ 509
> hsa:5822 PWP2, EHOC-17, PWP2H; PWP2 periodic tryptophan protein
homolog (yeast); K14558 periodic tryptophan protein 2
Length=919
Score = 44.7 bits (104), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query 5 FTETAPI-LSCCFGDTTQMLLTAGCDK--QVKAYDLISGRTTGQVIGQHDSPVNFVAWNP 61
FT P SC D + +++AG ++ + + +GR V+ H+ P++ + +NP
Sbjct 453 FTSPRPTQFSCVAVDASGEIVSAGAQDSFEIFVWSMQTGRLL-DVLSGHEGPISGLCFNP 511
Query 62 MYKLVISTSWDGAVKMWD 79
M ++ S SWD V++WD
Sbjct 512 MKSVLASASWDKTVRLWD 529
Score = 30.8 bits (68), Expect = 0.98, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query 21 QMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTSWDGAVKMWD 79
Q ++T G D +VK ++ +SG +H S V V + +V+++S DG V+ +D
Sbjct 386 QYIVTGGDDGKVKVWNTLSGFCF-VTFTEHSSGVTGVTFTATGYVVVTSSMDGTVRAFD 443
> xla:734637 hypothetical protein MGC115367; K14558 periodic tryptophan
protein 2
Length=895
Score = 44.7 bits (104), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query 5 FTETAPILSCCFG-DTTQMLLTAGCDKQVKAY--DLISGRTTGQVIGQHDSPVNFVAWNP 61
FT P C G D + ++ AG + Y + +GR V+ H+ P++ VA+NP
Sbjct 445 FTSPKPAQFSCLGVDGSGEIVCAGAQDSYEVYVWSMQTGRLL-DVLAGHEGPISSVAFNP 503
Query 62 MYKLVISTSWDGAVKMWD 79
++ + SWD V++WD
Sbjct 504 WRSVLATASWDKTVRLWD 521
Score = 32.0 bits (71), Expect = 0.53, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query 9 APILSCCFGDTTQMLLTAGCDKQVKAYDLI-SGRTTGQVIGQHDSPVNFVAWNPMYKLVI 67
PI S F +L TA DK V+ +D++ S RTT + D+ V + P + +
Sbjct 494 GPISSVAFNPWRSVLATASWDKTVRLWDMVDSWRTTETLNLSSDALA--VTFRPDGREIA 551
Query 68 STSWDGAVKMWDGKQ 82
S DG + W+ ++
Sbjct 552 VASLDGQITFWESEK 566
Score = 28.9 bits (63), Expect = 4.2, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query 13 SCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTSWD 72
S + Q ++T G D +VK +D SG H S V V + ++++S S D
Sbjct 370 SLSYSPDGQHIVTGGDDGKVKVWDTSSGFCY-VTFTDHTSSVTAVTFTSSGQVILSASLD 428
Query 73 GAVK 76
G V+
Sbjct 429 GTVR 432
> cel:ZC302.2 hypothetical protein
Length=501
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 0/77 (0%)
Query 10 PILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVIST 69
PI S + + T+ D ++ +D SG ++ +PV FV ++P K ++S
Sbjct 341 PITSISYNHDGNTMATSSYDGCIRVWDAASGSCLKTLVDTDHAPVTFVCFSPNGKYLLSA 400
Query 70 SWDGAVKMWDGKQPNPV 86
D ++K+WD K+ P+
Sbjct 401 QLDSSLKLWDPKKAKPL 417
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query 11 ILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTS 70
+ C F + ++ +AG D+ V+ +D +G + I H P+ +++N + ++S
Sbjct 300 VFCCSFNPQSSLIASAGFDETVRVWDFKTGLCV-KCIPAHSDPITSISYNHDGNTMATSS 358
Query 71 WDGAVKMWDG 80
+DG +++WD
Sbjct 359 YDGCIRVWDA 368
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query 20 TQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTSWDGAVKMWD 79
+Q + +A D VK +D+ISG + G H + V ++NP L+ S +D V++WD
Sbjct 267 SQFIASASDDTTVKIFDVISGACLRTMRG-HTNYVFCCSFNPQSSLIASAGFDETVRVWD 325
Query 80 GK 81
K
Sbjct 326 FK 327
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query 6 TETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVA--WNPMY 63
T+ AP+ CF + LL+A D +K +D + G + A P+
Sbjct 380 TDHAPVTFVCFSPNGKYLLSAQLDSSLKLWDPKKAKPLKYYNGHKNKKYCLFANMSVPLG 439
Query 64 KLVISTSWDGAVKMW 78
K +IS S DG + +W
Sbjct 440 KHIISGSEDGRILVW 454
> bbo:BBOV_II006880 18.m10036; WD domain/ mitotic checkpoint protein;
K02180 cell cycle arrest protein BUB3
Length=356
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query 5 FTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYK 64
+T +P L C F + + + D QV D+ +G T ++G H +PV V ++
Sbjct 74 YTGGSPALDCSFMEGDKKIAFGNLDNQVNVMDVETGDVT--LVGTHGAPVRCVQFHDRLN 131
Query 65 LVISTSWDGAVKMWD 79
++I+ WD ++ +D
Sbjct 132 MIITGGWDNKIRAFD 146
> dre:393827 wdr61, MGC77675, zgc:77675; WD repeat domain 61;
K12602 WD repeat-containing protein 61
Length=305
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query 10 PILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVIST 69
PI S F +Q+L+TA D +K YD+ G + G H S V VA++P +S+
Sbjct 192 PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG-HGSWVLSVAFSPDDTHFVSS 250
Query 70 SWDGAVKMWD 79
S D ++K+WD
Sbjct 251 SSDKSIKVWD 260
> pfa:PFE0540w WD-repeat protein, putative
Length=526
Score = 42.7 bits (99), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query 8 TAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVI 67
T PI S F +A D+ ++ +D+ S R Q++ H VN V ++P ++ ++
Sbjct 329 TGPIWSLSFHHQGDFFASASMDQTIRIFDINSLRQR-QILRGHVDSVNSVNFHPYFRTLV 387
Query 68 STSWDGAVKMWD 79
S S D + +WD
Sbjct 388 SASVDKTISIWD 399
Score = 36.6 bits (83), Expect = 0.018, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query 21 QMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTSWDGAVKMWD 79
+ L++A DK + +D+ SG G H P N+ +N +IS G VK+WD
Sbjct 384 RTLVSASVDKTISIWDMRSGLCENTFYGHH-FPCNYSNFNKDANWIISCDSGGVVKIWD 441
> mmu:140858 Wdr5, 2410008O07Rik, AA408785, AA960360, Big, Big-3;
WD repeat domain 5; K14963 COMPASS component SWD3
Length=334
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query 11 ILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTS 70
+ C F + ++++ D+ V+ +D+ +G+ + + H PV+ V +N L++S+S
Sbjct 132 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL-KTLPAHSDPVSAVHFNRDGSLIVSSS 190
Query 71 WDGAVKMWD 79
+DG ++WD
Sbjct 191 YDGLCRIWD 199
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 41/77 (53%), Gaps = 0/77 (0%)
Query 3 SLFTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPM 62
+L + P+ + F +++++ D + +D SG+ +I + PV+FV ++P
Sbjct 166 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 225
Query 63 YKLVISTSWDGAVKMWD 79
K +++ + D +K+WD
Sbjct 226 GKYILAATLDNTLKLWD 242
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query 20 TQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTSWDGAVKMWD 79
+ +L++A DK +K +D+ SG+ + G H + V +NP L++S S+D +V++WD
Sbjct 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query 80 GK 81
K
Sbjct 158 VK 159
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query 3 SLFTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPM 62
+L T + S F + L ++ DK +K + G+ + G H ++ VAW+
Sbjct 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSD 98
Query 63 YKLVISTSWDGAVKMWD 79
L++S S D +K+WD
Sbjct 99 SNLLVSASDDKTLKIWD 115
> hsa:11091 WDR5, BIG-3, SWD3; WD repeat domain 5; K14963 COMPASS
component SWD3
Length=334
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query 11 ILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTS 70
+ C F + ++++ D+ V+ +D+ +G+ + + H PV+ V +N L++S+S
Sbjct 132 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL-KTLPAHSDPVSAVHFNRDGSLIVSSS 190
Query 71 WDGAVKMWD 79
+DG ++WD
Sbjct 191 YDGLCRIWD 199
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 41/77 (53%), Gaps = 0/77 (0%)
Query 3 SLFTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPM 62
+L + P+ + F +++++ D + +D SG+ +I + PV+FV ++P
Sbjct 166 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 225
Query 63 YKLVISTSWDGAVKMWD 79
K +++ + D +K+WD
Sbjct 226 GKYILAATLDNTLKLWD 242
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query 20 TQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTSWDGAVKMWD 79
+ +L++A DK +K +D+ SG+ + G H + V +NP L++S S+D +V++WD
Sbjct 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query 80 GK 81
K
Sbjct 158 VK 159
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query 3 SLFTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPM 62
+L T + S F + L ++ DK +K + G+ + G H ++ VAW+
Sbjct 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSD 98
Query 63 YKLVISTSWDGAVKMWD 79
L++S S D +K+WD
Sbjct 99 SNLLVSASDDKTLKIWD 115
> xla:447447 wdr5-b, MGC81485, big-3, swd3, wdr5, xwdr5; WD repeat
domain 5; K14963 COMPASS component SWD3
Length=334
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query 11 ILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTS 70
+ C F + ++++ D+ V+ +D+ +G+ + + H PV+ V +N L++S+S
Sbjct 132 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL-KTLPAHSDPVSAVHFNRDGSLIVSSS 190
Query 71 WDGAVKMWD 79
+DG ++WD
Sbjct 191 YDGLCRIWD 199
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 41/77 (53%), Gaps = 0/77 (0%)
Query 3 SLFTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPM 62
+L + P+ + F +++++ D + +D SG+ +I + PV+FV ++P
Sbjct 166 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 225
Query 63 YKLVISTSWDGAVKMWD 79
K +++ + D +K+WD
Sbjct 226 GKYILAATLDNTLKLWD 242
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query 20 TQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTSWDGAVKMWD 79
+ +L++A DK +K +D+ SG+ + G H + V +NP L++S S+D +V++WD
Sbjct 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query 80 GK 81
K
Sbjct 158 VK 159
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query 3 SLFTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPM 62
+L T + S F + L ++ DK +K + G+ + G H ++ VAW+
Sbjct 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSD 98
Query 63 YKLVISTSWDGAVKMWD 79
L++S S D +K+WD
Sbjct 99 SNLLVSASDDKTLKIWD 115
> xla:446809 wdr5-a, MGC80538, big-3, swd3, xwdr5; WD repeat domain
5; K14963 COMPASS component SWD3
Length=334
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query 11 ILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTS 70
+ C F + ++++ D+ V+ +D+ +G+ + + H PV+ V +N L++S+S
Sbjct 132 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL-KTLPAHSDPVSAVHFNRDGSLIVSSS 190
Query 71 WDGAVKMWD 79
+DG ++WD
Sbjct 191 YDGLCRIWD 199
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query 20 TQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTSWDGAVKMWD 79
+ +L++A DK +K +D+ SG+ + G H + V +NP L++S S+D +V++WD
Sbjct 99 SNLLVSASDDKTLKIWDISSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query 80 GK 81
K
Sbjct 158 VK 159
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 41/77 (53%), Gaps = 0/77 (0%)
Query 3 SLFTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPM 62
+L + P+ + F +++++ D + +D SG+ +I + PV+FV ++P
Sbjct 166 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 225
Query 63 YKLVISTSWDGAVKMWD 79
K +++ + D +K+WD
Sbjct 226 GKYILAATLDNTLKLWD 242
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query 3 SLFTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPM 62
+L T + S F + L ++ DK +K + G+ + G H ++ VAW+
Sbjct 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSD 98
Query 63 YKLVISTSWDGAVKMWD 79
L++S S D +K+WD
Sbjct 99 SNLLVSASDDKTLKIWD 115
> dre:406372 wdr5, wu:fk47f04, zgc:56591, zgc:76895; WD repeat
domain 5; K14963 COMPASS component SWD3
Length=334
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query 11 ILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTS 70
+ C F + ++++ D+ V+ +D+ +G+ + + H PV+ V +N L++S+S
Sbjct 132 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL-KTLPAHSDPVSAVHFNRDGSLIVSSS 190
Query 71 WDGAVKMWD 79
+DG ++WD
Sbjct 191 YDGLCRIWD 199
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 41/77 (53%), Gaps = 0/77 (0%)
Query 3 SLFTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPM 62
+L + P+ + F +++++ D + +D SG+ +I + PV+FV ++P
Sbjct 166 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 225
Query 63 YKLVISTSWDGAVKMWD 79
K +++ + D +K+WD
Sbjct 226 GKYILAATLDNTLKLWD 242
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query 20 TQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTSWDGAVKMWD 79
+ +L++A DK +K +D+ SG+ + G H + V +NP L++S S+D +V++WD
Sbjct 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query 80 GK 81
K
Sbjct 158 VK 159
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query 3 SLFTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPM 62
+L T + S F + + L ++ DK +K + G+ + G H ++ VAW+
Sbjct 40 TLAGHTKAVSSVKFSPSGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSD 98
Query 63 YKLVISTSWDGAVKMWD 79
L++S S D +K+WD
Sbjct 99 SNLLVSASDDKTLKIWD 115
> xla:379734 tbl3, MGC69179; transducin (beta)-like 3; K14555
U3 small nucleolar RNA-associated protein 13
Length=831
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query 7 ETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNP-MYKL 65
TAP+ + F T+ +L T GCD +K +D+I T + G V+ V ++P M +L
Sbjct 105 HTAPVSTMTFDPTSTLLATGGCDSTIKIWDVIKQYCTHNLKGS-SGVVHLVQFHPDMSRL 163
Query 66 -VISTSWDGAVKMWDGK 81
+ S+S D +++WD K
Sbjct 164 QLFSSSMDYKIRLWDLK 180
Score = 27.7 bits (60), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 0/29 (0%)
Query 50 HDSPVNFVAWNPMYKLVISTSWDGAVKMW 78
HD +N V +P KL+ S S D K+W
Sbjct 488 HDKDINSVTVSPNDKLIASGSQDKTAKLW 516
> hsa:10607 TBL3, SAZD; transducin (beta)-like 3; K14555 U3 small
nucleolar RNA-associated protein 13
Length=808
Score = 42.0 bits (97), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query 8 TAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSP--VNFVAW--NPMY 63
TAP+ + F T+ +L T GCD V+ +D++ T G SP V+ VA+ +P
Sbjct 109 TAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRG---SPGVVHLVAFHPDPTR 165
Query 64 KLVISTSWDGAVKMW 78
L+ S++ D A+++W
Sbjct 166 LLLFSSATDAAIRVW 180
Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 0/30 (0%)
Query 50 HDSPVNFVAWNPMYKLVISTSWDGAVKMWD 79
H +PV +A++P L+ + DGAV++WD
Sbjct 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWD 137
Score = 28.1 bits (61), Expect = 7.4, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query 11 ILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTS 70
I S ++L T D+ K + L + G V H + V ++PM +++ + S
Sbjct 482 INSVAIAPNDKLLATGSQDRTAKLWALPQCQLLG-VFSGHRRGLWCVQFSPMDQVLATAS 540
Query 71 WDGAVKMW 78
DG +K+W
Sbjct 541 ADGTIKLW 548
> sce:YLR129W DIP2, UTP12; Dip2p; K14556 U3 small nucleolar RNA-associated
protein 12
Length=943
Score = 42.0 bits (97), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query 3 SLFTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPM 62
SL+ P+LS ++M++T+ DK +K + L G + DS +N V + P
Sbjct 568 SLYGHKLPVLSIDISFDSKMIITSSADKNIKIWGLDFGDCHKSLFAHQDSIMN-VKFLPQ 626
Query 63 YKLVISTSWDGAVKMWDGKQ 82
S S D VK WDG++
Sbjct 627 SHNFFSCSKDAVVKYWDGEK 646
Score = 31.6 bits (70), Expect = 0.65, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query 16 FGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTSWDGAV 75
F T L++ D + +DL+ ++ DS F W +ISTS DG +
Sbjct 129 FDGTGTRLISGSKDSNIIVWDLVGEVGLYKLRSHKDSITGF--WCQGEDWLISTSKDGMI 186
Query 76 KMWDGK 81
K+WD K
Sbjct 187 KLWDLK 192
> ath:AT3G49660 transducin family protein / WD-40 repeat family
protein; K14963 COMPASS component SWD3
Length=317
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query 16 FGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTSWDGAV 75
F + M+++ D+ V+ +D+ +G+ +V+ H PV V +N L++S+S+DG
Sbjct 121 FNPQSNMIVSGSFDETVRIWDVTTGKCL-KVLPAHSDPVTAVDFNRDGSLIVSSSYDGLC 179
Query 76 KMWD 79
++WD
Sbjct 180 RIWD 183
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query 11 ILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTS 70
I F + +++A DK +K +D+ +G +IG H + V +NP +++S S
Sbjct 74 ISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIG-HTNYAFCVNFNPQSNMIVSGS 132
Query 71 WDGAVKMWD 79
+D V++WD
Sbjct 133 FDETVRIWD 141
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/70 (20%), Positives = 36/70 (51%), Gaps = 0/70 (0%)
Query 10 PILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVIST 69
P+ + F +++++ D + +D +G +I + PV+FV ++P K ++
Sbjct 157 PVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVG 216
Query 70 SWDGAVKMWD 79
+ D +++W+
Sbjct 217 TLDNTLRLWN 226
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query 1 STSLFTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQ-------HDSP 53
S +L + + S F ++L +A DK ++ Y + T I + H++
Sbjct 17 SQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTI---NTINDPIAEPVQEFTGHENG 73
Query 54 VNFVAWNPMYKLVISTSWDGAVKMWD 79
++ VA++ + ++S S D +K+WD
Sbjct 74 ISDVAFSSDARFIVSASDDKTLKLWD 99
> sce:YAR003W SWD1, CPS50, FUN16, SAF49; Subunit of the COMPASS
(Set1C) complex, which methylates histone H3 on lysine 4 and
is required in transcriptional silencing near telomeres;
WD40 beta propeller superfamily member with similarity to mammalian
Rbbp7; K14961 COMPASS component SWD1
Length=426
Score = 42.0 bits (97), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 14/78 (17%)
Query 24 LTAGC-DKQVKAYDLISGR---TTGQVIGQHDSPVNFVAWNPMYKLVISTSWDGAVKMWD 79
L GC + + YD+ + R G ++G H P+ +AW+P +L++++S D ++K+WD
Sbjct 41 LALGCANGALVIYDMDTFRPICVPGNMLGAHVRPITSIAWSPDGRLLLTSSRDWSIKLWD 100
Query 80 GKQP----------NPVW 87
+P +P+W
Sbjct 101 LSKPSKPLKEIRFDSPIW 118
> mmu:382406 Poc1b, 4933430F16Rik, Wdr51b; POC1 centriolar protein
homolog B (Chlamydomonas)
Length=476
Score = 41.6 bits (96), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query 1 STSLFTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWN 60
S+ TAP+ S F Q+L+TA DK +K + + R + +H V ++
Sbjct 95 SSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLY-RHTHWVRCAKFS 153
Query 61 PMYKLVISTSWDGAVKMWD 79
P +L++S S D +K+WD
Sbjct 154 PDGRLIVSCSEDKTIKIWD 172
Score = 33.1 bits (74), Expect = 0.19, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Query 3 SLFTETAPILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPV---NFVAW 59
SL+ T + F +++++ DK +K +D T Q + V NFV +
Sbjct 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD----TTNKQCVNNFSDSVGFANFVDF 194
Query 60 NPMYKLVISTSWDGAVKMWD 79
NP + S D AVK+WD
Sbjct 195 NPNGTCIASAGSDHAVKIWD 214
Score = 32.0 bits (71), Expect = 0.52, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query 23 LLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTSWDGAVKMW 78
L+TA D VK DLI GR + G H PV V+++ +L+ S D V +W
Sbjct 243 LVTASSDGTVKMLDLIEGRLIYTLQG-HTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 31.2 bits (69), Expect = 0.89, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query 16 FGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTSWDGAV 75
F + +AG D VK +D+ + Q H VN ++++P+ +++ S DG V
Sbjct 194 FNPNGTCIASAGSDHAVKIWDIRMNKLL-QHYQVHSCGVNCLSFHPLGNSLVTASSDGTV 252
Query 76 KMWD 79
KM D
Sbjct 253 KMLD 256
> cel:F10G8.3 npp-17; Nuclear Pore complex Protein family member
(npp-17); K14298 mRNA export factor
Length=373
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query 9 APILSCCFGDTTQMLLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAW--NPMYKLV 66
APIL + + + + A DK+ + +DL S + V+G HD PV W Y+ +
Sbjct 90 APILDIAWIEDSSKIFIACADKEARLWDLASNQVA--VVGTHDGPVKTCHWINGNNYQCL 147
Query 67 ISTSWDGAVKMWDGKQ-PN 84
++ S+D ++ WD K PN
Sbjct 148 MTGSFDKTLRFWDMKNLPN 166
> xla:398032 katnb1; katanin p80 (WD repeat containing) subunit
B 1
Length=655
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query 23 LLTAGCDKQVKAYDLISGRTTGQVIGQHDSPVNFVAWNPMYKLVISTSWDGAVKMWD 79
L +A D VK +DL +G+ + + +H PVN + ++P L+ S S D V+ WD
Sbjct 162 LASASDDHSVKLWDLTAGKMMAE-LSEHKGPVNIIEFHPNEYLLASGSADRTVRFWD 217
Lambda K H
0.319 0.133 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2026251472
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40