bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_7003_orf3
Length=143
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_072900 DNA repair protein, putative (EC:3.6.3.8); K... 105 5e-23
pfa:PF11_0087 rad51; Rad51 homolog; K04482 DNA repair protein ... 101 8e-22
tpv:TP04_0230 DNA repair protein Rad51; K04482 DNA repair prot... 99.4 4e-21
cpv:cgd5_410 Rad51 ; K04482 DNA repair protein RAD51 97.4 1e-20
mmu:19361 Rad51, AV304093, Rad51a, Reca; RAD51 homolog (S. cer... 79.0 5e-15
xla:397726 rad51-a, MGC84850, brcc5, rad51, rad51a, reca, xrad... 78.6 7e-15
dre:406487 rad51, wu:fb38e12, zgc:77754; RAD51 homolog (RecA h... 77.8 1e-14
xla:380251 rad51-b, MGC130792, MGC52570, brcc5, rad51, rad51a,... 76.3 3e-14
sce:YER095W RAD51, MUT5; Rad51p; K04482 DNA repair protein RAD51 75.1 7e-14
ath:AT5G20850 ATRAD51; ATP binding / DNA binding / DNA-depende... 72.4 4e-13
bbo:BBOV_II003540 18.m06297; Rad51 protein; K04482 DNA repair ... 71.2 9e-13
cel:Y43C5A.6 rad-51; RADiation sensitivity abnormal/yeast RAD-... 68.9 5e-12
ath:AT3G22880 DMC1; DMC1 (DISRUPTION OF MEIOTIC CONTROL 1); AT... 65.9 5e-11
cpv:cgd7_1690 meiotic recombination protein DMC1-like protein ... 58.5 6e-09
hsa:11144 DMC1, DMC1H, HsLim15, LIM15, MGC150472, MGC150473, d... 58.5 7e-09
dre:553953 dmc1, MGC136628, zgc:136628; DMC1 dosage suppressor... 57.4 1e-08
tpv:TP04_0170 meiotic recombination protein DMC1; K04482 DNA r... 56.6 2e-08
sce:YER179W DMC1, ISC2; Dmc1p; K10872 meiotic recombination pr... 56.6 2e-08
mmu:13404 Dmc1, Dmc1h, MGC151144, Mei11, sgdp; DMC1 dosage sup... 56.6 3e-08
tgo:TGME49_016400 meiotic recombination protein DMC1-like prot... 50.1 2e-06
pfa:MAL8P1.76 meiotic recombination protein dmc1-like protein;... 46.2 3e-05
hsa:5888 RAD51, BRCC5, HRAD51, HsRad51, HsT16930, RAD51A, RECA... 41.2 0.001
> tgo:TGME49_072900 DNA repair protein, putative (EC:3.6.3.8);
K04482 DNA repair protein RAD51
Length=354
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 56/76 (73%), Gaps = 0/76 (0%)
Query 12 GLHTVECVAFAPPKALAALKGLGELRAAKVAAAARQLCSFGFCSAHEVFAARRNLIRFTT 71
G TVEC+AFAP K L A+KGL E + K+ A+++LC+ GFCSA E AR NLIRFTT
Sbjct 58 GYQTVECIAFAPVKNLVAVKGLSEQKVEKLKKASKELCNLGFCSAQEYLEARENLIRFTT 117
Query 72 GSAHLDALLGGGVETG 87
GS LD+LL GG+ETG
Sbjct 118 GSVQLDSLLKGGIETG 133
> pfa:PF11_0087 rad51; Rad51 homolog; K04482 DNA repair protein
RAD51
Length=350
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 62/86 (72%), Gaps = 0/86 (0%)
Query 2 RRPCLGVWPGGLHTVECVAFAPPKALAALKGLGELRAAKVAAAARQLCSFGFCSAHEVFA 61
+R + GGL TVECVA+AP + L A+KG+ E +A K+ A ++LC+ GFC+A +
Sbjct 45 KRDLELLKEGGLQTVECVAYAPMRTLCAIKGISEQKAEKLKKACKELCNSGFCNAIDYHD 104
Query 62 ARRNLIRFTTGSAHLDALLGGGVETG 87
AR+NLI+FTTGS LDALL GG+ETG
Sbjct 105 ARQNLIKFTTGSKQLDALLKGGIETG 130
> tpv:TP04_0230 DNA repair protein Rad51; K04482 DNA repair protein
RAD51
Length=343
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 54/77 (70%), Gaps = 0/77 (0%)
Query 12 GLHTVECVAFAPPKALAALKGLGELRAAKVAAAARQLCSFGFCSAHEVFAARRNLIRFTT 71
G T+ECVA+AP K L +KGL E + K+ AA R+LC GFCS + AR NLI+FTT
Sbjct 48 GYSTLECVAYAPQKNLLVIKGLSEQKVLKIKAACRELCHLGFCSGQDYLEARGNLIKFTT 107
Query 72 GSAHLDALLGGGVETGA 88
GSA LD LL GGVETG+
Sbjct 108 GSAQLDKLLQGGVETGS 124
> cpv:cgd5_410 Rad51 ; K04482 DNA repair protein RAD51
Length=347
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 60/89 (67%), Gaps = 0/89 (0%)
Query 2 RRPCLGVWPGGLHTVECVAFAPPKALAALKGLGELRAAKVAAAARQLCSFGFCSAHEVFA 61
+R + G HT+EC+A+AP KAL ++KG+ E + K+ +A ++L + GFCS E
Sbjct 41 KRDLEILRENGYHTIECLAYAPKKALLSVKGISEQKCDKIKSACKELVAMGFCSGTEYLE 100
Query 62 ARRNLIRFTTGSAHLDALLGGGVETGAAA 90
AR NLI+FTTGS+ LD LL GG+ETG+
Sbjct 101 ARTNLIKFTTGSSQLDRLLQGGIETGSIT 129
> mmu:19361 Rad51, AV304093, Rad51a, Reca; RAD51 homolog (S. cerevisiae);
K04482 DNA repair protein RAD51
Length=339
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 0/77 (0%)
Query 12 GLHTVECVAFAPPKALAALKGLGELRAAKVAAAARQLCSFGFCSAHEVFAARRNLIRFTT 71
G HTVE VA+AP K L +KG+ E +A K+ A +L GF +A E R +I+ TT
Sbjct 45 GYHTVEAVAYAPKKELINIKGISEAKADKILTEAAKLVPMGFTTATEFHQRRSEIIQITT 104
Query 72 GSAHLDALLGGGVETGA 88
GS LD LL GG+ETG+
Sbjct 105 GSKELDKLLQGGIETGS 121
> xla:397726 rad51-a, MGC84850, brcc5, rad51, rad51a, reca, xrad51;
RAD51 homolog (RecA homolog); K04482 DNA repair protein
RAD51
Length=336
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 0/77 (0%)
Query 12 GLHTVECVAFAPPKALAALKGLGELRAAKVAAAARQLCSFGFCSAHEVFAARRNLIRFTT 71
G HTVE VA+AP K L +KG+ E +A K+ A A +L GF +A E R +I+ +T
Sbjct 42 GFHTVEAVAYAPKKELLNIKGISEAKAEKILAEAAKLVPMGFTTATEFHQRRSEIIQIST 101
Query 72 GSAHLDALLGGGVETGA 88
GS LD LL GGVETG+
Sbjct 102 GSKELDKLLQGGVETGS 118
> dre:406487 rad51, wu:fb38e12, zgc:77754; RAD51 homolog (RecA
homolog, E. coli) (S. cerevisiae); K04482 DNA repair protein
RAD51
Length=338
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 0/81 (0%)
Query 8 VWPGGLHTVECVAFAPPKALAALKGLGELRAAKVAAAARQLCSFGFCSAHEVFAARRNLI 67
+ GG HTVE VA+AP K L +KG+ E +A K+ A ++ GF +A E R +I
Sbjct 40 LEDGGFHTVEAVAYAPKKELLNIKGISEAKADKILTEAAKMVPMGFTTATEFHQRRAEII 99
Query 68 RFTTGSAHLDALLGGGVETGA 88
+ +TGS LD LL GG+ETG+
Sbjct 100 QISTGSKELDKLLQGGIETGS 120
> xla:380251 rad51-b, MGC130792, MGC52570, brcc5, rad51, rad51a,
reca, xrad51; RAD51 homolog (RecA homolog); K04482 DNA repair
protein RAD51
Length=336
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 0/77 (0%)
Query 12 GLHTVECVAFAPPKALAALKGLGELRAAKVAAAARQLCSFGFCSAHEVFAARRNLIRFTT 71
G HTVE VA+AP K L +KG+ E +A K+ A A +L GF +A E R +I+ T
Sbjct 42 GFHTVEAVAYAPKKELLNIKGISEAKAEKILAEAAKLVPMGFTTATEFHQRRSEIIQIGT 101
Query 72 GSAHLDALLGGGVETGA 88
GS LD LL GG+ETG+
Sbjct 102 GSKELDKLLQGGIETGS 118
> sce:YER095W RAD51, MUT5; Rad51p; K04482 DNA repair protein RAD51
Length=400
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 0/77 (0%)
Query 12 GLHTVECVAFAPPKALAALKGLGELRAAKVAAAARQLCSFGFCSAHEVFAARRNLIRFTT 71
GLHT E VA+AP K L +KG+ E +A K+ A +L GF +A + R LI TT
Sbjct 103 GLHTAEAVAYAPRKDLLEIKGISEAKADKLLNEAARLVPMGFVTAADFHMRRSELICLTT 162
Query 72 GSAHLDALLGGGVETGA 88
GS +LD LLGGGVETG+
Sbjct 163 GSKNLDTLLGGGVETGS 179
> ath:AT5G20850 ATRAD51; ATP binding / DNA binding / DNA-dependent
ATPase/ damaged DNA binding / nucleoside-triphosphatase/
nucleotide binding / protein binding / sequence-specific DNA
binding; K04482 DNA repair protein RAD51
Length=342
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 0/77 (0%)
Query 12 GLHTVECVAFAPPKALAALKGLGELRAAKVAAAARQLCSFGFCSAHEVFAARRNLIRFTT 71
GL TVE VA+ P K L +KG+ + + K+ AA +L GF SA ++ A R+ +I+ T+
Sbjct 48 GLCTVEGVAYTPRKDLLQIKGISDAKVDKIVEAASKLVPLGFTSASQLHAQRQEIIQITS 107
Query 72 GSAHLDALLGGGVETGA 88
GS LD +L GG+ETG+
Sbjct 108 GSRELDKVLEGGIETGS 124
> bbo:BBOV_II003540 18.m06297; Rad51 protein; K04482 DNA repair
protein RAD51
Length=346
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 0/77 (0%)
Query 12 GLHTVECVAFAPPKALAALKGLGELRAAKVAAAARQLCSFGFCSAHEVFAARRNLIRFTT 71
G T++ +A K L +KGL E + AK+ ++LC C+A E R NLI+FTT
Sbjct 48 GYVTLDSIAQVASKTLLEVKGLSEQKVAKIKEIVKELCPPDICTAAEYLECRLNLIKFTT 107
Query 72 GSAHLDALLGGGVETGA 88
GS LDALL GG+E+G+
Sbjct 108 GSTALDALLQGGIESGS 124
> cel:Y43C5A.6 rad-51; RADiation sensitivity abnormal/yeast RAD-related
family member (rad-51); K04482 DNA repair protein
RAD51
Length=395
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 0/77 (0%)
Query 12 GLHTVECVAFAPPKALAALKGLGELRAAKVAAAARQLCSFGFCSAHEVFAARRNLIRFTT 71
G +T E +AF + L +KG+ + +A K+ A + GF + EV R L++ T
Sbjct 99 GYYTYESLAFTTRRELRNVKGISDQKAEKIMKEAMKFVQMGFTTGAEVHVKRSQLVQIRT 158
Query 72 GSAHLDALLGGGVETGA 88
GSA LD LLGGG+ETG+
Sbjct 159 GSASLDRLLGGGIETGS 175
> ath:AT3G22880 DMC1; DMC1 (DISRUPTION OF MEIOTIC CONTROL 1);
ATP binding / DNA binding / DNA-dependent ATPase/ damaged DNA
binding / nucleoside-triphosphatase/ nucleotide binding /
protein binding; K10872 meiotic recombination protein DMC1
Length=344
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 0/81 (0%)
Query 12 GLHTVECVAFAPPKALAALKGLGELRAAKVAAAARQLCSFGFCSAHEVFAARRNLIRFTT 71
G+HT + K L +KGL E + K+ AA ++ +FG+ + + R+++++ TT
Sbjct 51 GIHTCNGLMMHTKKNLTGIKGLSEAKVDKICEAAEKIVNFGYMTGSDALIKRKSVVKITT 110
Query 72 GSAHLDALLGGGVETGAAAAA 92
G LD LLGGG+ET A A
Sbjct 111 GCQALDDLLGGGIETSAITEA 131
> cpv:cgd7_1690 meiotic recombination protein DMC1-like protein
; K10872 meiotic recombination protein DMC1
Length=342
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query 12 GLHTVECVAFAPPKALAALKGLGELRAAKVAAAARQL-CSFGFCSAHEVFAARRNLIRFT 70
GL TV + A K L +KGL E + K+ AA++L S F S EV + R+N++R T
Sbjct 47 GLCTVLSIIQATKKELCNIKGLSEAKVEKIVEAAQKLDQSSSFQSGSEVMSRRQNILRIT 106
Query 71 TGSAHLDALLGGGVET 86
TGS D +L GG E+
Sbjct 107 TGSEQFDKMLMGGFES 122
> hsa:11144 DMC1, DMC1H, HsLim15, LIM15, MGC150472, MGC150473,
dJ199H16.1; DMC1 dosage suppressor of mck1 homolog, meiosis-specific
homologous recombination (yeast); K10872 meiotic recombination
protein DMC1
Length=340
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 0/81 (0%)
Query 12 GLHTVECVAFAPPKALAALKGLGELRAAKVAAAARQLCSFGFCSAHEVFAARRNLIRFTT 71
G+ T++ + +AL +KGL E + K+ AA +L GF +A E R+ + TT
Sbjct 44 GICTIKGIQMTTRRALCNVKGLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITT 103
Query 72 GSAHLDALLGGGVETGAAAAA 92
GS D LLGGG+E+ A A
Sbjct 104 GSQEFDKLLGGGIESMAITEA 124
> dre:553953 dmc1, MGC136628, zgc:136628; DMC1 dosage suppressor
of mck1 homolog, meiosis-specific homologous recombination
(yeast); K10872 meiotic recombination protein DMC1
Length=342
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 0/81 (0%)
Query 12 GLHTVECVAFAPPKALAALKGLGELRAAKVAAAARQLCSFGFCSAHEVFAARRNLIRFTT 71
G+ TV+ + +AL +KGL E + K+ AA +L + GF +A E R+ + TT
Sbjct 46 GICTVKGIQMTTRRALCNIKGLSEAKVDKIKEAAGKLLTCGFQTASEYCIKRKQVFHITT 105
Query 72 GSAHLDALLGGGVETGAAAAA 92
GS D LLGGGVE+ A A
Sbjct 106 GSLEFDKLLGGGVESMAITEA 126
> tpv:TP04_0170 meiotic recombination protein DMC1; K04482 DNA
repair protein RAD51
Length=346
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query 12 GLHTVECVAFAPPKALAALKGLGELRAAKVAAAARQL-CSFGFCSAHEVFAARRNLIRFT 70
G+ TV V K L +KGL EL+ K++ A +L + F SA E++ R+++++
Sbjct 53 GICTVLGVIQTTKKDLCNIKGLTELKVDKISDCASKLEVTNSFISASELYKIRKSILKIN 112
Query 71 TGSAHLDALLGGGVETGAAA 90
TGS L+ LL GG+ET +
Sbjct 113 TGSEMLNRLLNGGIETMSIT 132
> sce:YER179W DMC1, ISC2; Dmc1p; K10872 meiotic recombination
protein DMC1
Length=334
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 0/76 (0%)
Query 11 GGLHTVECVAFAPPKALAALKGLGELRAAKVAAAARQLCSFGFCSAHEVFAARRNLIRFT 70
GG++TV V + L +KGL E++ K+ AA ++ GF A R+ + +
Sbjct 38 GGIYTVNTVLSTTRRHLCKIKGLSEVKVEKIKEAAGKIIQVGFIPATVQLDIRQRVYSLS 97
Query 71 TGSAHLDALLGGGVET 86
TGS LD++LGGG+ T
Sbjct 98 TGSKQLDSILGGGIMT 113
> mmu:13404 Dmc1, Dmc1h, MGC151144, Mei11, sgdp; DMC1 dosage suppressor
of mck1 homolog, meiosis-specific homologous recombination
(yeast); K10872 meiotic recombination protein DMC1
Length=340
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 0/81 (0%)
Query 12 GLHTVECVAFAPPKALAALKGLGELRAAKVAAAARQLCSFGFCSAHEVFAARRNLIRFTT 71
G+ T++ + +AL +KGL E + K+ AA +L GF +A + R+ + TT
Sbjct 44 GICTIKGIQMTTRRALCNVKGLSEAKVEKIKEAANKLIEPGFLTAFQYSERRKMVFHITT 103
Query 72 GSAHLDALLGGGVETGAAAAA 92
GS D LLGGG+E+ A A
Sbjct 104 GSQEFDKLLGGGIESMAITEA 124
> tgo:TGME49_016400 meiotic recombination protein DMC1-like protein,
putative (EC:2.7.11.1); K10872 meiotic recombination
protein DMC1
Length=349
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query 15 TVECVAFAPPKALAALKGLGELRAAKVAAAARQLCSFGFCSAH----EVFAARRNLIRFT 70
TV + K L +KG+ E + K+ AA +L G C+A E+ R +I+ T
Sbjct 57 TVLSIVQTTKKELCLVKGISEAKVEKIVEAAAKL---GMCNAFITGVELVQKRGRVIKIT 113
Query 71 TGSAHLDALLGGGVET 86
TGS LD LLGGG ET
Sbjct 114 TGSDQLDQLLGGGFET 129
> pfa:MAL8P1.76 meiotic recombination protein dmc1-like protein;
K10872 meiotic recombination protein DMC1
Length=347
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query 15 TVECVAFAPPKALAALKGLGELRAAKVAAAARQL--CSFGFCSAHEVFAARRNLIRFTTG 72
T+ + K L +KG+ E + K+ A ++ CS F +A+E+ R +++ TTG
Sbjct 55 TILSLIQTTKKELCNVKGISEAKVDKILEVASKIENCS-SFITANELVQKRSKVLKITTG 113
Query 73 SAHLDALLGGGVET 86
S D LGGG+E+
Sbjct 114 STVFDQTLGGGIES 127
> hsa:5888 RAD51, BRCC5, HRAD51, HsRad51, HsT16930, RAD51A, RECA;
RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae); K04482
DNA repair protein RAD51
Length=340
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 0/53 (0%)
Query 12 GLHTVECVAFAPPKALAALKGLGELRAAKVAAAARQLCSFGFCSAHEVFAARR 64
G HTVE VA+AP K L +KG+ E +A K+ +R + S V+ R
Sbjct 45 GFHTVEAVAYAPKKELINIKGISEAKADKILTESRSVARLECNSVILVYCTLR 97
Lambda K H
0.321 0.130 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2749206264
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40