bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_6423_orf1
Length=162
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_058030 DNA polymerase delta catalytic subunit, puta... 253 2e-67
pfa:PF10_0165 DNA polymerase delta catalytic subunit; K02327 D... 206 3e-53
cpv:cgd6_4410 DNA polymerase delta catalytic subunit. DNAQ-lik... 201 1e-51
xla:447518 pold1, MGC83185, POL3, cdc2, pold; polymerase (DNA ... 185 6e-47
dre:556456 pold1, MGC152688, fla, im:7139126, zgc:152688; poly... 184 1e-46
sce:YDL102W POL3, CDC2, HPR6, TEX1; Catalytic subunit of DNA p... 180 2e-45
ath:AT5G63960 EMB2780 (EMBRYO DEFECTIVE 2780); DNA binding / D... 176 3e-44
mmu:18971 Pold1, 125kDa; polymerase (DNA directed), delta 1, c... 176 4e-44
cel:F10C2.4 hypothetical protein; K02327 DNA polymerase delta ... 174 2e-43
tpv:TP01_0899 DNA polymerase delta catalytic subunit; K02327 D... 173 2e-43
bbo:BBOV_IV008750 23.m05784; DNA polymerase delta subunit (EC:... 173 3e-43
hsa:5424 POLD1, CDC2, POLD; polymerase (DNA directed), delta 1... 167 1e-41
hsa:5980 REV3L, POLZ, REV3; REV3-like, catalytic subunit of DN... 52.4 7e-07
xla:100316923 rev3l; REV3-like, catalytic subunit of DNA polym... 51.2 1e-06
mmu:19714 Rev3l, Rev, Rev3, Sez4; REV3-like, catalytic subunit... 50.8 2e-06
sce:YPL167C REV3, PSO1; Catalytic subunit of DNA polymerase ze... 48.9 7e-06
ath:AT1G67500 ATREV3; ATREV3 (ARABIDOPSIS THALIANA RECOVERY PR... 43.5 3e-04
pfa:PFD0590c DNA polymerase alpha; K02320 DNA polymerase alpha... 43.5 3e-04
ath:AT1G49180 protein kinase family protein 40.8 0.002
hsa:5422 POLA1, DKFZp686K1672, POLA, p180; polymerase (DNA dir... 39.7 0.005
dre:317740 pola1, cb678, pola; polymerase (DNA directed), alph... 36.2 0.054
mmu:18968 Pola1, AW321876, Pola; polymerase (DNA directed), al... 35.4 0.080
hsa:5426 POLE, DKFZp434F222, FLJ21434, POLE1; polymerase (DNA ... 35.4 0.085
dre:553405 pole, si:dkeyp-98c11.2; polymerase (DNA directed), ... 34.7 0.15
eco:b0060 polB, dinA, ECK0061, JW0059; DNA polymerase II (EC:2... 33.5 0.29
ath:AT5G67100 ICU2; ICU2 (INCURVATA2); DNA-directed DNA polyme... 33.5 0.31
mmu:18973 Pole; polymerase (DNA directed), epsilon (EC:2.7.7.7... 33.5 0.34
bbo:BBOV_III010120 17.m07879; DNA polymerase family B family p... 33.1 0.46
xla:398200 pola1, pola; polymerase (DNA directed), alpha 1, ca... 32.7 0.52
cpv:cgd3_4290 DNA polymerase alpha catalytic subunit ; K02320 ... 31.6 1.3
cel:Y37B11A.2 hypothetical protein; K02350 DNA polymerase zeta... 31.2 1.8
tgo:TGME49_119860 DNA polymerase epsilon catalytic subunit, pu... 30.8 2.2
ath:AT2G27120 TIL2; TIL2 (TILTED 2); DNA binding / DNA-directe... 30.4 2.9
cpv:cgd8_1240 DNA polymerase epsilon catalytic subunit ; K0232... 30.0 3.5
cel:C44B9.6 fbxb-87; F-box B protein family member (fbxb-87) 30.0 3.9
cel:F33H2.5 hypothetical protein; K02324 DNA polymerase epsilo... 29.3 5.2
dre:373136 evpl, sb:cb742; si:ch211-157f15.1; K10383 envoplakin 28.9 7.0
cpv:cgd7_640 Prp16p pre-mRNA splicing factor. HrpA family SFII... 28.5 9.4
> tgo:TGME49_058030 DNA polymerase delta catalytic subunit, putative
(EC:2.7.7.7); K02327 DNA polymerase delta subunit 1 [EC:2.7.7.7]
Length=1268
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 115/153 (75%), Positives = 136/153 (88%), Gaps = 0/153 (0%)
Query 1 AGALVVWFDDESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSR 60
AG++V+WFDDE EML KWAEFVR+VDPDFL+GYNC+NFDL YL+TRA+ LK G LS+
Sbjct 530 AGSVVLWFDDEKEMLAKWAEFVRQVDPDFLSGYNCVNFDLNYLITRAATLKVVGFNRLSK 589
Query 61 LKSIESRISDTRFSSRALGTHDNKEIPMEGRVQFDLLELIRRDHKLKSYSLNYVSSEFLK 120
LKS+ES+I D+ FSSRALGTH+ K+I EGR+QFDLLEL+RRD+KLKSYSLN+VS EFLK
Sbjct 590 LKSLESKIRDSSFSSRALGTHEGKDIATEGRIQFDLLELVRRDYKLKSYSLNFVSFEFLK 649
Query 121 EQKEDVHYSMIGDLFRGSPTTRRRIAVYCLKDA 153
EQKEDVHY+MIGDLFRG P++RRRI VYCLKDA
Sbjct 650 EQKEDVHYNMIGDLFRGCPSSRRRIGVYCLKDA 682
> pfa:PF10_0165 DNA polymerase delta catalytic subunit; K02327
DNA polymerase delta subunit 1 [EC:2.7.7.7]
Length=1094
Score = 206 bits (524), Expect = 3e-53, Method: Composition-based stats.
Identities = 92/159 (57%), Positives = 124/159 (77%), Gaps = 0/159 (0%)
Query 2 GALVVWFDDESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSRL 61
G+ V+WF+DE +L+ W EF+ +DPDFLTGYN INFDL Y+L R +AL + + L R+
Sbjct 359 GSNVIWFNDEKTLLEAWNEFIIRIDPDFLTGYNIINFDLPYILNRGTALNLKKLKFLGRI 418
Query 62 KSIESRISDTRFSSRALGTHDNKEIPMEGRVQFDLLELIRRDHKLKSYSLNYVSSEFLKE 121
K++ S + D+ FSS+ GTH+ KEI + GR+QFD+ +LI+RD+KLKSY+LNYVS EFLKE
Sbjct 419 KNVASTVKDSSFSSKQFGTHETKEINIFGRIQFDVYDLIKRDYKLKSYTLNYVSFEFLKE 478
Query 122 QKEDVHYSMIGDLFRGSPTTRRRIAVYCLKDALLPLRLL 160
QKEDVHYS++ DL SP +R+RIA YC+KD +LPLRL+
Sbjct 479 QKEDVHYSIMNDLQNESPESRKRIATYCIKDGVLPLRLI 517
> cpv:cgd6_4410 DNA polymerase delta catalytic subunit. DNAQ-like
3'-5' exonuclease; RNAseH fold ; K02327 DNA polymerase delta
subunit 1 [EC:2.7.7.7]
Length=1084
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/160 (59%), Positives = 119/160 (74%), Gaps = 0/160 (0%)
Query 1 AGALVVWFDDESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSR 60
A A V WF+ E +ML W +F+ +DPD +TGYNCINFD+ YLL RA + +R
Sbjct 349 AEAFVFWFESEKDMLLAWKDFLLALDPDVITGYNCINFDMNYLLERAKLFQLNDFFFFTR 408
Query 61 LKSIESRISDTRFSSRALGTHDNKEIPMEGRVQFDLLELIRRDHKLKSYSLNYVSSEFLK 120
L + DTRFSSRA GTH++K I +EGR+ +D+LE IRR+HKLKSYSLNYVS+ FLK
Sbjct 409 LAKTKITSKDTRFSSRAFGTHESKLINIEGRILWDILETIRREHKLKSYSLNYVSTNFLK 468
Query 121 EQKEDVHYSMIGDLFRGSPTTRRRIAVYCLKDALLPLRLL 160
EQKEDVHYSMI L G+P TR+RIA+YCLKD++LPLRL+
Sbjct 469 EQKEDVHYSMIRGLQDGNPETRKRIAIYCLKDSILPLRLM 508
> xla:447518 pold1, MGC83185, POL3, cdc2, pold; polymerase (DNA
directed), delta 1, catalytic subunit 125kDa (EC:2.7.7.7);
K02327 DNA polymerase delta subunit 1 [EC:2.7.7.7]
Length=1109
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 117/160 (73%), Gaps = 0/160 (0%)
Query 1 AGALVVWFDDESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSR 60
G+ V+ F+ E +LK WAEFVR +DPD +TGYN NFD+ YL+ RA LK L R
Sbjct 369 VGSQVLCFEREDALLKAWAEFVRIIDPDIITGYNIQNFDMPYLINRAQTLKVSTFPFLGR 428
Query 61 LKSIESRISDTRFSSRALGTHDNKEIPMEGRVQFDLLELIRRDHKLKSYSLNYVSSEFLK 120
++S++S I D+ F S+ +G +NK I EGRVQFDLL+++ RD+KL+SY+LN VS FL+
Sbjct 429 IRSLKSVIRDSSFQSKQMGRRENKVINTEGRVQFDLLQVLLRDYKLRSYTLNAVSFHFLQ 488
Query 121 EQKEDVHYSMIGDLFRGSPTTRRRIAVYCLKDALLPLRLL 160
EQKEDV +S+I DL G+ TRRR+AVYCLKDA LPLRLL
Sbjct 489 EQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLL 528
> dre:556456 pold1, MGC152688, fla, im:7139126, zgc:152688; polymerase
(DNA directed), delta 1, catalytic subunit (EC:2.7.7.7);
K02327 DNA polymerase delta subunit 1 [EC:2.7.7.7]
Length=1105
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/159 (56%), Positives = 115/159 (72%), Gaps = 0/159 (0%)
Query 2 GALVVWFDDESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSRL 61
G+ ++ F E ML+ WAEF+R VDPD +TGYN NFDL YLL RA+ LK L R+
Sbjct 369 GSQILCFTQEKLMLQSWAEFMRTVDPDIITGYNIQNFDLPYLLNRAATLKVNMFPYLGRV 428
Query 62 KSIESRISDTRFSSRALGTHDNKEIPMEGRVQFDLLELIRRDHKLKSYSLNYVSSEFLKE 121
+S + D+ F S+ +G +NK I MEGRVQFDLL+++ RD+KL+SY+LN VS FL+E
Sbjct 429 WGCKSVLKDSSFQSKQMGRRENKTINMEGRVQFDLLQVLLRDYKLRSYTLNAVSFHFLQE 488
Query 122 QKEDVHYSMIGDLFRGSPTTRRRIAVYCLKDALLPLRLL 160
QKEDV +S+I DL G+ TRRR+AVYCLKDA LPLRLL
Sbjct 489 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLL 527
> sce:YDL102W POL3, CDC2, HPR6, TEX1; Catalytic subunit of DNA
polymerase delta; required for chromosomal DNA replication
during mitosis and meiosis, intragenic recombination, repair
of double strand DNA breaks, and DNA replication during nucleotide
excision repair (NER) (EC:2.7.7.7); K02327 DNA polymerase
delta subunit 1 [EC:2.7.7.7]
Length=1097
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 112/160 (70%), Gaps = 0/160 (0%)
Query 1 AGALVVWFDDESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSR 60
G+++ E EML W F+ +VDPD + GYN NFD+ YLL RA ALK R
Sbjct 369 TGSMIFSHATEEEMLSNWRNFIIKVDPDVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGR 428
Query 61 LKSIESRISDTRFSSRALGTHDNKEIPMEGRVQFDLLELIRRDHKLKSYSLNYVSSEFLK 120
LK+++ I ++ FSS+A GT + K + ++GR+Q DLL+ I+R++KL+SY+LN VS+ FL
Sbjct 429 LKTVKQEIKESVFSSKAYGTRETKNVNIDGRLQLDLLQFIQREYKLRSYTLNAVSAHFLG 488
Query 121 EQKEDVHYSMIGDLFRGSPTTRRRIAVYCLKDALLPLRLL 160
EQKEDVHYS+I DL G TRRR+AVYCLKDA LPLRL+
Sbjct 489 EQKEDVHYSIISDLQNGDSETRRRLAVYCLKDAYLPLRLM 528
> ath:AT5G63960 EMB2780 (EMBRYO DEFECTIVE 2780); DNA binding /
DNA-directed DNA polymerase/ nucleic acid binding / nucleotide
binding; K02327 DNA polymerase delta subunit 1 [EC:2.7.7.7]
Length=1095
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/159 (54%), Positives = 110/159 (69%), Gaps = 0/159 (0%)
Query 2 GALVVWFDDESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSRL 61
G V+ F+ E E+L W + +R+VDPD + GYN FDL YL+ RA+ L E L R+
Sbjct 361 GVDVMSFETEREVLLAWRDLIRDVDPDIIIGYNICKFDLPYLIERAATLGIEEFPLLGRV 420
Query 62 KSIESRISDTRFSSRALGTHDNKEIPMEGRVQFDLLELIRRDHKLKSYSLNYVSSEFLKE 121
K+ R+ D+ FSSR G ++KE +EGR QFDL++ I RDHKL SYSLN VS+ FL E
Sbjct 421 KNSRVRVRDSTFSSRQQGIRESKETTIEGRFQFDLIQAIHRDHKLSSYSLNSVSAHFLSE 480
Query 122 QKEDVHYSMIGDLFRGSPTTRRRIAVYCLKDALLPLRLL 160
QKEDVH+S+I DL G+ TRRR+AVYCLKDA LP RLL
Sbjct 481 QKEDVHHSIITDLQNGNAETRRRLAVYCLKDAYLPQRLL 519
> mmu:18971 Pold1, 125kDa; polymerase (DNA directed), delta 1,
catalytic subunit (EC:2.7.7.7); K02327 DNA polymerase delta
subunit 1 [EC:2.7.7.7]
Length=1105
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 114/159 (71%), Gaps = 0/159 (0%)
Query 2 GALVVWFDDESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSRL 61
GA V ++ E ++L+ WA+F+ +DPD +TGYN NFDL YL++RA ALK + L R+
Sbjct 363 GAKVQSYEREEDLLQAWADFILAMDPDVITGYNIQNFDLPYLISRAQALKVDRFPFLGRV 422
Query 62 KSIESRISDTRFSSRALGTHDNKEIPMEGRVQFDLLELIRRDHKLKSYSLNYVSSEFLKE 121
+ S I D+ F SR +G D+K I M GRVQ D+L+++ R+HKL+SY+LN VS FL E
Sbjct 423 TGLRSNIRDSSFQSRQVGRRDSKVISMVGRVQMDMLQVLLREHKLRSYTLNAVSFHFLGE 482
Query 122 QKEDVHYSMIGDLFRGSPTTRRRIAVYCLKDALLPLRLL 160
QKEDV +S+I DL G+ TRRR+AVYCLKDA LPLRLL
Sbjct 483 QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAFLPLRLL 521
> cel:F10C2.4 hypothetical protein; K02327 DNA polymerase delta
subunit 1 [EC:2.7.7.7]
Length=1081
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/159 (53%), Positives = 113/159 (71%), Gaps = 0/159 (0%)
Query 2 GALVVWFDDESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSRL 61
G+ ++ +E +L+KWAEFVREVDPD +TGYN +NFDL Y+L RA L V+ L R
Sbjct 335 GSNIIQCVNEKVLLEKWAEFVREVDPDIITGYNILNFDLPYILDRAKVLSLPQVSHLGRQ 394
Query 62 KSIESRISDTRFSSRALGTHDNKEIPMEGRVQFDLLELIRRDHKLKSYSLNYVSSEFLKE 121
K S + D SS+ +G+ NK I + GR+ FD+L+++ RD+KL+SY+LN VS +FL E
Sbjct 395 KEKGSVVRDAAISSKQMGSRVNKSIDIHGRIIFDVLQVVLRDYKLRSYTLNSVSYQFLSE 454
Query 122 QKEDVHYSMIGDLFRGSPTTRRRIAVYCLKDALLPLRLL 160
QKEDV +++I DL RG TRRR+A YCLKDA LPLRLL
Sbjct 455 QKEDVEHNIIPDLQRGDEQTRRRLAQYCLKDAYLPLRLL 493
> tpv:TP01_0899 DNA polymerase delta catalytic subunit; K02327
DNA polymerase delta subunit 1 [EC:2.7.7.7]
Length=1095
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/155 (54%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query 1 AGALVVWFDDESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEG-VASLS 59
A ++ FD+E ++L W +FV VDPDFLTGYN I FDL YLLTR+S L E L+
Sbjct 349 ANCTILSFDNEEQLLLAWNDFVTFVDPDFLTGYNIILFDLPYLLTRSSVLNIEARFKKLT 408
Query 60 RLKSIESRISDTRFSSRALGTHDNKEIPMEGRVQFDLLELIRRDHKLKSYSLNYVSSEFL 119
R++S+ D+ ++ LG ++NKEI +EGR+ FD+ +L+RRD+KLKSYSLN+VS EFL
Sbjct 409 RIRSVNCNFKDSISNNNILGLYENKEINIEGRILFDVYDLVRRDYKLKSYSLNFVSFEFL 468
Query 120 KEQKEDVHYSMIGDLFRGSPTTRRRIAVYCLKDAL 154
K+QKEDVHYS I LF G+ RRRIA YCLKD++
Sbjct 469 KQQKEDVHYSTILKLFNGNNNDRRRIASYCLKDSI 503
> bbo:BBOV_IV008750 23.m05784; DNA polymerase delta subunit (EC:2.7.7.7);
K02327 DNA polymerase delta subunit 1 [EC:2.7.7.7]
Length=1065
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 109/153 (71%), Gaps = 0/153 (0%)
Query 2 GALVVWFDDESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSRL 61
GA V+ F +E+ +L W +F VDPDFLTGYN INFD+ YL+ RA+ALK L R+
Sbjct 327 GAHVLSFANEAALLMAWKQFFIAVDPDFLTGYNIINFDIPYLINRANALKLPEFTQLPRI 386
Query 62 KSIESRISDTRFSSRALGTHDNKEIPMEGRVQFDLLELIRRDHKLKSYSLNYVSSEFLKE 121
+S + D S+ +GT +NKEI +EGR+ FD+ +L+RRDHKLKSY+LNYVS EFLK+
Sbjct 387 TRSKSSVRDIISSNNTMGTFENKEINIEGRILFDVYDLVRRDHKLKSYTLNYVSFEFLKQ 446
Query 122 QKEDVHYSMIGDLFRGSPTTRRRIAVYCLKDAL 154
QKEDVH+S + L GS RRRIA YCLKD++
Sbjct 447 QKEDVHHSTMSKLQLGSAADRRRIASYCLKDSV 479
> hsa:5424 POLD1, CDC2, POLD; polymerase (DNA directed), delta
1, catalytic subunit 125kDa (EC:2.7.7.7); K02327 DNA polymerase
delta subunit 1 [EC:2.7.7.7]
Length=1107
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 111/159 (69%), Gaps = 0/159 (0%)
Query 2 GALVVWFDDESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSRL 61
GA V ++ E ++L+ W+ F+R +DPD +TGYN NFDL YL++RA LK + L R+
Sbjct 365 GAKVQSYEKEEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPFLGRV 424
Query 62 KSIESRISDTRFSSRALGTHDNKEIPMEGRVQFDLLELIRRDHKLKSYSLNYVSSEFLKE 121
+ S I D+ F S+ G D K + M GRVQ D+L+++ R++KL+SY+LN VS FL E
Sbjct 425 AGLCSNIRDSSFQSKQTGRRDTKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGE 484
Query 122 QKEDVHYSMIGDLFRGSPTTRRRIAVYCLKDALLPLRLL 160
QKEDV +S+I DL G+ TRRR+AVYCLKDA LPLRLL
Sbjct 485 QKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLPLRLL 523
> hsa:5980 REV3L, POLZ, REV3; REV3-like, catalytic subunit of
DNA polymerase zeta (yeast) (EC:2.7.7.7); K02350 DNA polymerase
zeta subunit [EC:2.7.7.7]
Length=3130
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Query 1 AGALVVWFDDESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSR 60
G V + DE + + A ++ DPD L GY YLL RA+AL + +SR
Sbjct 2372 TGLEVTYAADEKALFHEIANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSIDLCRMISR 2431
Query 61 LK--SIESRISDTRFSSRALGTHDNKEIPMEGRVQFDLLELIRRDHKLKSYSLNYVSSEF 118
+ IE+R + R G++ EI + GR+ +L ++R + L +Y+ VS
Sbjct 2432 VPDDKIENRFAAER---DEYGSYTMSEINIVGRITLNLWRIMRNEVALTNYTFENVSFHV 2488
Query 119 LKEQKEDVHYSMIGDLF 135
L ++ + ++ D F
Sbjct 2489 LHQRFPLFTFRVLSDWF 2505
> xla:100316923 rev3l; REV3-like, catalytic subunit of DNA polymerase
zeta; K02350 DNA polymerase zeta subunit [EC:2.7.7.7]
Length=3139
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query 1 AGALVVWFDDESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSR 60
G V + DE ++ VR DPD L GY YLL RASAL + LSR
Sbjct 2381 TGFEVTYATDEKQLFVMLLSLVRRFDPDILLGYEVQMHSWGYLLQRASALNVDLCQQLSR 2440
Query 61 LKSIESRISDTRFSSRA--LGTHDNKEIPMEGRVQFDLLELIRRDHKLKSYSLNYVSSEF 118
+ + ++ RFSS G EI + GR+ ++ ++R + L +Y+ V+
Sbjct 2441 VPDDK---NENRFSSEKDEYGADTMSEINIVGRIVLNVWRMMRSEAALTNYTFENVAFHI 2497
Query 119 LKE 121
L +
Sbjct 2498 LHQ 2500
> mmu:19714 Rev3l, Rev, Rev3, Sez4; REV3-like, catalytic subunit
of DNA polymerase zeta RAD54 like (S. cerevisiae) (EC:2.7.7.7);
K02350 DNA polymerase zeta subunit [EC:2.7.7.7]
Length=3122
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 5/137 (3%)
Query 1 AGALVVWFDDESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSR 60
G V + DE + ++ ++ DPD L GY YLL RA+AL + +SR
Sbjct 2364 TGLEVTYAADEKALFQEITNIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISR 2423
Query 61 LK--SIESRISDTRFSSRALGTHDNKEIPMEGRVQFDLLELIRRDHKLKSYSLNYVSSEF 118
+ IE+R + R G+ EI + GR+ +L ++R + L +Y+ VS
Sbjct 2424 VPDDKIENRFAAER---DDYGSDTMSEINIVGRITLNLWRIMRNEVALTNYTFENVSFHV 2480
Query 119 LKEQKEDVHYSMIGDLF 135
L ++ + ++ D F
Sbjct 2481 LHQRFPLFTFRVLSDWF 2497
> sce:YPL167C REV3, PSO1; Catalytic subunit of DNA polymerase
zeta, involved in translesion synthesis during post-replication
repair; required for mutagenesis induced by DNA damage;
involved in double-strand break repair (EC:2.7.7.7); K02350
DNA polymerase zeta subunit [EC:2.7.7.7]
Length=1504
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query 5 VVWFDDESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASAL-KAEGVASLSRLK- 62
V++++ E EM + + V +DPD L+G+ NF Y++ R + + + V L+R+K
Sbjct 739 VMFYESEFEMFEALTDLVLLLDPDILSGFEIHNFSWGYIIERCQKIHQFDIVRELARVKC 798
Query 63 SIESRISDTRFSSRALGTHDNKEIPMEGRVQFDLLELIRRDHKLKSYSLNYVSSEFLKEQ 122
I++++SDT + + G I + GR ++ +R D L Y++ + L ++
Sbjct 799 QIKTKLSDTWGYAHSSG------IMITGRHMINIWRALRSDVNLTQYTIESAAFNILHKR 852
Query 123 KEDVHYSMIGDLF--RGSPTTRRRIAVYCLKDALLPLRLL 160
+ + +++ + S T + + Y L A + ++LL
Sbjct 853 LPHFSFESLTNMWNAKKSTTELKTVLNYWLSRAQINIQLL 892
> ath:AT1G67500 ATREV3; ATREV3 (ARABIDOPSIS THALIANA RECOVERY
PROTEIN 3); DNA binding / DNA-directed DNA polymerase; K02350
DNA polymerase zeta subunit [EC:2.7.7.7]
Length=1890
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 83/187 (44%), Gaps = 28/187 (14%)
Query 1 AGALVVWFDDESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSR 60
+G + F +E ++ + + E + + DPD L G++ + +L RA+ L + ++SR
Sbjct 1093 SGCKLSVFLEERQLFRYFIETLCKWDPDVLLGWDIQGGSIGFLAERAAQLGIRFLNNISR 1152
Query 61 LKSIESRISDTRFSSRALGTH-----------DNKEIPME--------------GRVQFD 95
S + ++ + R LG + +E+ +E GR+ +
Sbjct 1153 TPSPTT--TNNSDNKRKLGNNLLPDPLVANPAQVEEVVIEDEWGRTHASGVHVGGRIVLN 1210
Query 96 LLELIRRDHKLKSYSLNYVSSEFLKEQKEDVHYSMIGDLFRGSPT-TRRRIAVYCLKDAL 154
LIR + KL Y++ VS L+++ + Y ++ + F P R R Y ++ A
Sbjct 1211 AWRLIRGEVKLNMYTIEAVSEAVLRQKVPSIPYKVLTEWFSSGPAGARYRCIEYVIRRAN 1270
Query 155 LPLRLLT 161
L L +++
Sbjct 1271 LNLEIMS 1277
> pfa:PFD0590c DNA polymerase alpha; K02320 DNA polymerase alpha
subunit A [EC:2.7.7.7]
Length=1912
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 64/123 (52%), Gaps = 6/123 (4%)
Query 8 FDDESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEG-VASLSRLKSIES 66
FD+E E+L + E ++++D D GYN +NFDL +L+ R + + S +
Sbjct 723 FDNEKELLHTFLEKIKDLDIDIYIGYNILNFDLEFLIHRCNVHNLNSYILSRKKKMKKNE 782
Query 67 RISDTRFS-SRALGTHDNKEIPMEGRVQFDLLELIRRDHKLKSYSL----NYVSSEFLKE 121
++ +F+ + + G+ N ++GR+ D+ L + KL +Y L ++V ++F +
Sbjct 783 KMKVNKFNGTNSTGSMYNIIQNIKGRLIVDIYLLCKDSIKLTTYCLDEIIDHVKNKFQDK 842
Query 122 QKE 124
K+
Sbjct 843 SKQ 845
> ath:AT1G49180 protein kinase family protein
Length=408
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 11/79 (13%)
Query 21 FVREVDPDFLTGYNCINFDLCYLL---TRASALKAEGVASLSRLKSIESRISDTRFSSRA 77
++++ PD CI D+C L A+ L E L R+K+ + DT FSSR
Sbjct 230 ILQQMHPD------CI--DVCSRLLSINPAATLGIEDFPFLGRIKNSRVWVKDTTFSSRQ 281
Query 78 LGTHDNKEIPMEGRVQFDL 96
GT + K + GR+QFDL
Sbjct 282 HGTRERKVATINGRLQFDL 300
> hsa:5422 POLA1, DKFZp686K1672, POLA, p180; polymerase (DNA directed),
alpha 1, catalytic subunit (EC:2.7.7.7); K02320 DNA
polymerase alpha subunit A [EC:2.7.7.7]
Length=1462
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query 22 VREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSRLKSIESRISDTRFSSRA-LGT 80
V ++DPD + G+N F+L LL R + KA + + RLK R + + R+ G
Sbjct 626 VHKIDPDIIVGHNIYGFELEVLLQRINVCKAPHWSKIGRLK----RSNMPKLGGRSGFGE 681
Query 81 HDNKEIPMEGRVQFDLLELIRRDHKLKSYSLNYVSSEFLKEQKEDVHYSMIGDLFRGS 138
+ M V+ ELIR KSY L+ + + LK ++ + I +++ S
Sbjct 682 RNATCGRMICDVEISAKELIR----CKSYHLSELVQQILKTERVVIPMENIQNMYSES 735
> dre:317740 pola1, cb678, pola; polymerase (DNA directed), alpha
1; K02320 DNA polymerase alpha subunit A [EC:2.7.7.7]
Length=1470
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 15/121 (12%)
Query 22 VREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSRLKSIESRISDTRFSSRALGTH 81
+ ++DPD L G++ FDL LL R + K + + RL+ R + + R+
Sbjct 636 MHKIDPDVLVGHDIFGFDLEVLLQRINVCKVPHWSKIGRLR----RANMPKLGGRSGFAE 691
Query 82 DNKEIPMEGRVQFDL----LELIRRDHKLKSYSLNYVSSEFLKEQKEDVHYSMIGDLFRG 137
+ GR+ D+ ELIR KSY+L + S+ LK ++ V I + +
Sbjct 692 KSATC---GRLVCDIEISAKELIR----CKSYNLTELVSQILKAERPVVPPENIRNFYSD 744
Query 138 S 138
S
Sbjct 745 S 745
> mmu:18968 Pola1, AW321876, Pola; polymerase (DNA directed),
alpha 1 (EC:2.7.7.7); K02320 DNA polymerase alpha subunit A
[EC:2.7.7.7]
Length=1465
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query 22 VREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSRLKSIESRISDTRFSSRA-LGT 80
V ++DPD L G+N +F+L LL R + K + + RL+ R + + SR+ G
Sbjct 630 VHKIDPDILVGHNICSFELEVLLQRINECKVPYWSKIGRLR----RSNMPKLGSRSGFGE 685
Query 81 HDNKEIPMEGRVQFDLLELIRRDHKLKSYSLNYVSSEFLKEQKEDVHYSMIGDLFRGS 138
+ M V+ ELI KSY L+ + + LK ++ + I +++ S
Sbjct 686 RNATCGRMICDVEISAKELIH----CKSYHLSELVQQILKTERIVIPTENIRNMYSES 739
> hsa:5426 POLE, DKFZp434F222, FLJ21434, POLE1; polymerase (DNA
directed), epsilon (EC:2.7.7.7); K02324 DNA polymerase epsilon
subunit 1 [EC:2.7.7.7]
Length=2286
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 19/145 (13%)
Query 10 DESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSRLKSIESRIS 69
DE+ ++++W E V+E P + YN FD ++ RA+ V LS + I
Sbjct 339 DEAHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAA------VHGLSMQQEI----- 387
Query 70 DTRFSSRALGTHDNKEIPMEGRVQFDLLELIRRDHKLKSYSLNYVSSEFLKEQKEDVHYS 129
F + G + + + D L ++RD L S N ++ K + V
Sbjct 388 --GFQKDSQGEYKAPQC-----IHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELD 440
Query 130 MIGDLFRGSPTTRRRIAVYCLKDAL 154
D+ R + + +A Y + DA+
Sbjct 441 P-EDMCRMATEQPQTLATYSVSDAV 464
> dre:553405 pole, si:dkeyp-98c11.2; polymerase (DNA directed),
epsilon (EC:2.7.7.7); K02324 DNA polymerase epsilon subunit
1 [EC:2.7.7.7]
Length=2284
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 0/41 (0%)
Query 10 DESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASAL 50
DE+ ++++W E V E P+ YN FD ++ RA+ L
Sbjct 338 DEASLIQRWFEHVHETKPNIFVTYNGDFFDWPFVEARAAQL 378
> eco:b0060 polB, dinA, ECK0061, JW0059; DNA polymerase II (EC:2.7.7.7);
K02336 DNA polymerase II [EC:2.7.7.7]
Length=783
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 15/148 (10%)
Query 12 SEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRAS--ALKAEGVASLSRLKSIESRIS 69
++L+K + DPD + G+N + FDL L A L S L+ E
Sbjct 202 PQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFK 261
Query 70 DTRFSSRALGTHDNKEIPMEGRVQFDLLELIRRDH-KLKSYSLNYVSSEFLKEQKE-DVH 127
+ F ++A +GR+ D +E ++ S+SL V+ E L E K D
Sbjct 262 NGVFFAQA-----------KGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNP 310
Query 128 YSMIGDLFRGSPTTRRRIAVYCLKDALL 155
+ + ++ R + +A Y LKD L
Sbjct 311 WDRMDEIDRRFAEDKPALATYNLKDCEL 338
> ath:AT5G67100 ICU2; ICU2 (INCURVATA2); DNA-directed DNA polymerase;
K02320 DNA polymerase alpha subunit A [EC:2.7.7.7]
Length=1492
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Query 22 VREVDPDFLTGYNCINFDLCYLLTRASALKAEGV--ASLSRLK-SIESRISDTRFSSRAL 78
+ ++D D L G+N FDL LL RA A K + + + RLK S ++ S+
Sbjct 660 LNKLDSDILVGHNISGFDLDVLLQRAQACKVQSSMWSKIGRLKRSFMPKLKGN--SNYGS 717
Query 79 GTHDNKEIPMEGRVQFDLLELIRRD-HKLKSYSLNYVSSEFLKEQKEDVHYSMIGDLFRG 137
G + GR+ D +L RD K SYSL +S L ++++ + I +F+
Sbjct 718 GATPGLMSCIAGRLLCD-TDLCSRDLLKEVSYSLTDLSKTQLNRDRKEIAPNDIPKMFQS 776
Query 138 SPT 140
S T
Sbjct 777 SKT 779
> mmu:18973 Pole; polymerase (DNA directed), epsilon (EC:2.7.7.7);
K02324 DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Length=2283
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 59/145 (40%), Gaps = 19/145 (13%)
Query 10 DESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSRLKSIESRIS 69
DE ++++W E ++E P + YN FD ++ RA+ + LS + I
Sbjct 339 DEVHLIQRWFEHIQETKPTIMVTYNGDFFDWPFVEARAA------IHGLSMYQEI----- 387
Query 70 DTRFSSRALGTHDNKEIPMEGRVQFDLLELIRRDHKLKSYSLNYVSSEFLKEQKEDVHYS 129
F + G + + + D L ++RD L S N ++ K + V
Sbjct 388 --GFQKDSQGEYKAPQC-----IHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELD 440
Query 130 MIGDLFRGSPTTRRRIAVYCLKDAL 154
D+ R + + +A Y + DA+
Sbjct 441 P-EDMCRMATEQPQTLATYSVSDAV 464
> bbo:BBOV_III010120 17.m07879; DNA polymerase family B family
protein; K02350 DNA polymerase zeta subunit [EC:2.7.7.7]
Length=1478
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 18/129 (13%)
Query 5 VVWFDDESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEGVAS-LSRLKS 63
V + E E++++ + DP+ + GY+ + Y+ RA+A+ GV L R+
Sbjct 635 VAYVQSERELIQEVENLFIKFDPNIIYGYDVARSSIGYIQHRAAAI---GVPDFLERISR 691
Query 64 IESRISDTRFSSRALGTHDN-------------KEIPMEGRVQFDLLELIRRDHKLKSYS 110
+ + + TH N K + GR+ FDL ++ R+ L + +
Sbjct 692 VPPKHERQITDITTIMTHQNAKLIKGRYKSSSIKPVFCLGRLIFDLADVALRELNLANLT 751
Query 111 L-NYVSSEF 118
L N V ++F
Sbjct 752 LENIVYNQF 760
> xla:398200 pola1, pola; polymerase (DNA directed), alpha 1,
catalytic subunit (EC:2.7.7.7); K02320 DNA polymerase alpha
subunit A [EC:2.7.7.7]
Length=1458
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 19/108 (17%)
Query 22 VREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSRL-KSIESRISD-TRFSSRALG 79
+ ++DPD + G++ FDL LL R ++ K + + RL +S+ ++ + F+ R
Sbjct 626 IHKIDPDVIVGHDIYGFDLEVLLQRINSCKVPFWSKIGRLRRSVMPKLGGRSGFAERNAA 685
Query 80 THDNKEIPMEGRVQFDL----LELIRRDHKLKSYSLNYVSSEFLKEQK 123
GR+ D+ ELIR KSY L+ + + LK ++
Sbjct 686 C---------GRIICDIEISAKELIR----CKSYHLSELVHQILKAER 720
> cpv:cgd3_4290 DNA polymerase alpha catalytic subunit ; K02320
DNA polymerase alpha subunit A [EC:2.7.7.7]
Length=1488
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Query 5 VVWFDDESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSRLKSI 64
+ +F +E +L + +DPD + G+N L L++R + GV ++ +L I
Sbjct 596 INYFSNERSLLLAFVTSFSLLDPDIIVGHNVWTDHLDVLVSRMVNI---GVPNIWKLGKI 652
Query 65 ESRISDTRFSSRALGTHDNKEIPMEGRVQFDLLELIRRDHKLKS-YSLNYVSSE 117
+ + + S ++L + + +GR+ D R K ++ Y LN + SE
Sbjct 653 CISVQNQKQSIKSLSSTKRIQSVFQGRIICDTCLSAREFMKSRTDYQLNSIFSE 706
> cel:Y37B11A.2 hypothetical protein; K02350 DNA polymerase zeta
subunit [EC:2.7.7.7]
Length=1133
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 20/110 (18%)
Query 19 AEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSRLKSIESRISDTRFSSRAL 78
A+++ + D D + GY I + R+K + SRIS R A
Sbjct 421 AKWIVQYDVDVMIGYETIRLSWGFF--------------FRRIKLLGSRISMDRALIDAY 466
Query 79 GTH---DNKEI---PMEGRVQFDLLELIRRDHKLKSYSLNYVSSEFLKEQ 122
H D++EI P +GR+ + +++R D L++Y L + L+++
Sbjct 467 EDHIEVDDQEITVAPPKGRLLVSVWKVVRSDLALRNYDLGSAVANVLRKK 516
> tgo:TGME49_119860 DNA polymerase epsilon catalytic subunit,
putative (EC:2.7.11.12 2.7.7.7); K02324 DNA polymerase epsilon
subunit 1 [EC:2.7.7.7]
Length=3124
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 22/157 (14%)
Query 1 AGALVVWFD-DESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLS 59
AG +++ + E E+L ++ + V ++ P L YN FD ++ R + ++S
Sbjct 561 AGPFIIFNEKGEKELLSRFVQHVLKLRPHILATYNGDTFDFPFVYKRGELNGLDFISSF- 619
Query 60 RLKSIESRISDTRFSSRALGTHDNKEIPMEGRVQFDLLELIRRDHKLK--SYSLNYVSSE 117
I SD F + H D + + RD L S +L V E
Sbjct 620 ---GITPFTSDNSFQGNSALIH------------IDCFKWVERDSYLPQGSRTLKLVCKE 664
Query 118 FLKEQKEDVHYSMIGDLFRGSPTTRRRIAVYCLKDAL 154
L+ +V + L P + +AVY + DA+
Sbjct 665 KLRFNPVEVDPEDMVPLALNRP---QELAVYSVSDAV 698
> ath:AT2G27120 TIL2; TIL2 (TILTED 2); DNA binding / DNA-directed
DNA polymerase/ nucleic acid binding / nucleotide binding
/ zinc ion binding; K02324 DNA polymerase epsilon subunit
1 [EC:2.7.7.7]
Length=2138
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 0/39 (0%)
Query 10 DESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRAS 48
+E E+L+KW ++E+ P YN FD ++ RAS
Sbjct 303 NEVELLRKWFSHMQELKPGIYVTYNGDFFDWPFIERRAS 341
> cpv:cgd8_1240 DNA polymerase epsilon catalytic subunit ; K02324
DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Length=2728
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 0/40 (0%)
Query 8 FDDESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRA 47
+ DE E++ + + ++ + P + YN NFD +L RA
Sbjct 344 YPDEKELIWGFIKLIQTLRPHIIASYNGDNFDFPFLYERA 383
> cel:C44B9.6 fbxb-87; F-box B protein family member (fbxb-87)
Length=326
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 0/28 (0%)
Query 21 FVREVDPDFLTGYNCINFDLCYLLTRAS 48
F++ +D D+L +N +N L +L TR+S
Sbjct 119 FIKHIDYDYLEEFNNLNIQLLHLATRSS 146
> cel:F33H2.5 hypothetical protein; K02324 DNA polymerase epsilon
subunit 1 [EC:2.7.7.7]
Length=2144
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 68/156 (43%), Gaps = 24/156 (15%)
Query 2 GALVVWFD-DESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSR 60
G VW + DE+ +++K+ + +V P+ + YN FD ++ RA K G
Sbjct 314 GEFTVWNEKDEAALIRKFFDHFLQVRPNIVVTYNGDFFDWPFVEARA---KIRGF----- 365
Query 61 LKSIESRISDTRFSSRALGTHDNKEIPMEGRVQFDLLELIRRDHKLK--SYSLNYVSSEF 118
++E I FS + + ++ + D ++RD L S +L V+
Sbjct 366 --NMEREIG---FSKDSADEYKSRNC-----IHMDAFRWVKRDSYLPVGSQNLKAVTKAK 415
Query 119 LKEQKEDVHYSMIGDLFRGSPTTRRRIAVYCLKDAL 154
L+ +V ++ + R P +++A Y + DA+
Sbjct 416 LRYDPVEVEPELMCKMAREQP---QQLANYSVSDAV 448
> dre:373136 evpl, sb:cb742; si:ch211-157f15.1; K10383 envoplakin
Length=1975
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
Query 20 EFVR-EVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSRLKSIESRIS--DTRFSSR 76
E VR E DP+ L D+ R +LK+E + S + S+E I + + ++
Sbjct 1056 EVVRLEKDPEMLKAVRTFELDISDEGERCKSLKSEISQTKSNINSLERLIPTLEPKVVTK 1115
Query 77 ALG-THDNKEIPMEGRVQFDLLELIRRDHKLKSYSLNYVSSEFLKEQKEDVHY---SMIG 132
+ + + ME + + +E +R ++K + LN + S ++ Q+ +I
Sbjct 1116 EVKRVEQDPVLIMESKELLNKIEEVRNENKSLMFELNNLQSRHVQIQQMKPRVEVKEIIN 1175
Query 133 DLFRGSPTT 141
+ FR +P T
Sbjct 1176 ENFRVAPET 1184
> cpv:cgd7_640 Prp16p pre-mRNA splicing factor. HrpA family SFII
helicase ; K12815 pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP16 [EC:3.6.4.13]
Length=1042
Score = 28.5 bits (62), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 73/174 (41%), Gaps = 33/174 (18%)
Query 8 FDDESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSRLKSIESR 67
FD+++ KK V P FL + +L + ++ + K + + +I+ +
Sbjct 167 FDEKNN--KKIHIIVDRTYPKFLKSW-----ELNTIKSQLESFKGDPETENDEVNTIKDK 219
Query 68 ISD----TRFSSRALGTHDNKEIPMEGRVQFDLLE------LIRRD--HKLKSYSLNYVS 115
SD R S L T KE ++ R +F L+ LI D H ++ S+ S
Sbjct 220 TSDIAKLARTGSSILKTLRLKENKVKMRQRFWELQNSKIGALISSDKSHSIEENSI--YS 277
Query 116 SEFLKEQKEDVHYSMIGDLFRGSP------------TTRRRIAVYCLKDALLPL 157
+ KE K D GDLFR S TRR + VY ++D+L+ L
Sbjct 278 QDGPKEGKYDNSKQSFGDLFRKSKDISENDSRQRMLMTRRSLPVYKVRDSLIKL 331
Lambda K H
0.322 0.137 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 3767900632
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40