bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_6329_orf1
Length=60
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_090950 clathrin heavy chain, putative ; K04646 clat... 99.8 2e-21
ath:AT3G11130 clathrin heavy chain, putative; K04646 clathrin ... 80.1 2e-15
ath:AT3G08530 clathrin heavy chain, putative; K04646 clathrin ... 78.2 5e-15
dre:100330183 cltc; clathrin, heavy chain (Hc) 72.4 4e-13
xla:444287 cltc, MGC80936; clathrin, heavy chain (Hc); K04646 ... 68.9 3e-12
pfa:PFL0930w clathrin heavy chain, putative; K04646 clathrin h... 68.6 5e-12
dre:503600 cltcb, im:7145213, zgc:113234; clathrin, heavy poly... 68.2 6e-12
hsa:1213 CLTC, CHC, CHC17, CLH-17, CLTCL2, Hc, KIAA0034; clath... 68.2 7e-12
mmu:67300 Cltc, 3110065L21Rik, CHC, MGC92975, R74732; clathrin... 68.2 7e-12
hsa:8218 CLTCL1, CHC22, CLH22, CLTCL, CLTD, FLJ36032; clathrin... 67.8 7e-12
dre:323579 cltca, cb1033, cltc, wu:fc03e11, wu:fc49a11, wu:fd0... 67.8 9e-12
cel:T20G5.1 chc-1; Clathrin Heavy Chain family member (chc-1);... 65.5 4e-11
cpv:cgd8_1270 clathrin heavy chain ; K04646 clathrin heavy chain 48.1 7e-06
sce:YGL206C CHC1, SWA5; Chc1p; K04646 clathrin heavy chain 42.7 3e-04
bbo:BBOV_IV001820 21.m02773; clathrin heavy chain; K04646 clat... 33.5 0.18
eco:b4395 ytjC, ECK4387, gpmB, JW4358; predicted phosphoglycer... 30.4 1.3
> tgo:TGME49_090950 clathrin heavy chain, putative ; K04646 clathrin
heavy chain
Length=1731
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/58 (86%), Positives = 52/58 (89%), Gaps = 0/58 (0%)
Query 3 ELWAYVLRPENSYRRSVIDQVVSSALPESSSADEVSAAVNAFISAQLPQELTELLEKI 60
ELWAYVLR EN +RR IDQVVSSALPESSSADEVSAAVNAFI+AQLP EL ELLEKI
Sbjct 986 ELWAYVLREENPHRRQAIDQVVSSALPESSSADEVSAAVNAFINAQLPHELIELLEKI 1043
> ath:AT3G11130 clathrin heavy chain, putative; K04646 clathrin
heavy chain
Length=1705
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 46/59 (77%), Gaps = 0/59 (0%)
Query 2 AELWAYVLRPENSYRRSVIDQVVSSALPESSSADEVSAAVNAFISAQLPQELTELLEKI 60
+LW VL EN YRR +IDQVVS+ALPES S ++VSAAV AF++A LP EL ELLEKI
Sbjct 967 GDLWEKVLTEENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIELLEKI 1025
> ath:AT3G08530 clathrin heavy chain, putative; K04646 clathrin
heavy chain
Length=1703
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 45/59 (76%), Gaps = 0/59 (0%)
Query 2 AELWAYVLRPENSYRRSVIDQVVSSALPESSSADEVSAAVNAFISAQLPQELTELLEKI 60
+LW VL N YRR +IDQVVS+ALPES S ++VSAAV AF++A LP EL ELLEKI
Sbjct 967 GDLWDKVLDENNDYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIELLEKI 1025
> dre:100330183 cltc; clathrin, heavy chain (Hc)
Length=951
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 42/58 (72%), Gaps = 0/58 (0%)
Query 3 ELWAYVLRPENSYRRSVIDQVVSSALPESSSADEVSAAVNAFISAQLPQELTELLEKI 60
+LWA VL N YRR +IDQVV +ALPE+ +EVS V AF++A LP EL ELLEKI
Sbjct 460 DLWARVLEETNPYRRPLIDQVVQTALPETQDPEEVSVTVKAFMTADLPNELIELLEKI 517
> xla:444287 cltc, MGC80936; clathrin, heavy chain (Hc); K04646
clathrin heavy chain
Length=1675
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 41/58 (70%), Gaps = 0/58 (0%)
Query 3 ELWAYVLRPENSYRRSVIDQVVSSALPESSSADEVSAAVNAFISAQLPQELTELLEKI 60
ELWA VL N YRR +IDQVV +AL E+ +EVS V AF++A LP EL ELLEKI
Sbjct 954 ELWASVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKI 1011
> pfa:PFL0930w clathrin heavy chain, putative; K04646 clathrin
heavy chain
Length=1997
Score = 68.6 bits (166), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 0/58 (0%)
Query 3 ELWAYVLRPENSYRRSVIDQVVSSALPESSSADEVSAAVNAFISAQLPQELTELLEKI 60
ELW VL N YR++VIDQV+ S L ES++ADE++ V AFI +L EL ELLEKI
Sbjct 1161 ELWKVVLDETNKYRKNVIDQVIGSTLIESNNADEITVTVKAFIEKKLSSELIELLEKI 1218
> dre:503600 cltcb, im:7145213, zgc:113234; clathrin, heavy polypeptide
b (Hc); K04646 clathrin heavy chain
Length=1677
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 41/58 (70%), Gaps = 0/58 (0%)
Query 3 ELWAYVLRPENSYRRSVIDQVVSSALPESSSADEVSAAVNAFISAQLPQELTELLEKI 60
ELWA VL N YRR +IDQVV +AL E+ +EVS V AF++A LP EL ELLEKI
Sbjct 954 ELWASVLLEVNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKI 1011
> hsa:1213 CLTC, CHC, CHC17, CLH-17, CLTCL2, Hc, KIAA0034; clathrin,
heavy chain (Hc); K04646 clathrin heavy chain
Length=1675
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 0/58 (0%)
Query 3 ELWAYVLRPENSYRRSVIDQVVSSALPESSSADEVSAAVNAFISAQLPQELTELLEKI 60
ELW VL N YRR +IDQVV +AL E+ +EVS V AF++A LP EL ELLEKI
Sbjct 954 ELWGSVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKI 1011
> mmu:67300 Cltc, 3110065L21Rik, CHC, MGC92975, R74732; clathrin,
heavy polypeptide (Hc); K04646 clathrin heavy chain
Length=1675
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 0/58 (0%)
Query 3 ELWAYVLRPENSYRRSVIDQVVSSALPESSSADEVSAAVNAFISAQLPQELTELLEKI 60
ELW VL N YRR +IDQVV +AL E+ +EVS V AF++A LP EL ELLEKI
Sbjct 954 ELWGSVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKI 1011
> hsa:8218 CLTCL1, CHC22, CLH22, CLTCL, CLTD, FLJ36032; clathrin,
heavy chain-like 1; K04646 clathrin heavy chain
Length=1583
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 0/58 (0%)
Query 3 ELWAYVLRPENSYRRSVIDQVVSSALPESSSADEVSAAVNAFISAQLPQELTELLEKI 60
ELWA+VL N RR +IDQVV +AL E+ +E+S V AF++A LP EL ELLEKI
Sbjct 954 ELWAHVLEETNPSRRQLIDQVVQTALSETRDPEEISVTVKAFMTADLPNELIELLEKI 1011
> dre:323579 cltca, cb1033, cltc, wu:fc03e11, wu:fc49a11, wu:fd07f02;
clathrin, heavy polypeptide a (Hc); K04646 clathrin
heavy chain
Length=1680
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 0/58 (0%)
Query 3 ELWAYVLRPENSYRRSVIDQVVSSALPESSSADEVSAAVNAFISAQLPQELTELLEKI 60
ELWA VL N +RR +IDQVV +AL E+ +EVS V AF++A LP EL ELLEKI
Sbjct 954 ELWASVLLETNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKI 1011
> cel:T20G5.1 chc-1; Clathrin Heavy Chain family member (chc-1);
K04646 clathrin heavy chain
Length=1681
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 0/57 (0%)
Query 4 LWAYVLRPENSYRRSVIDQVVSSALPESSSADEVSAAVNAFISAQLPQELTELLEKI 60
LW VL EN +RR +IDQVV +AL E+ +++S V AF++A LP EL ELLEKI
Sbjct 957 LWEQVLNEENVHRRQLIDQVVQTALSETQDPEDISVTVKAFMAADLPNELIELLEKI 1013
> cpv:cgd8_1270 clathrin heavy chain ; K04646 clathrin heavy chain
Length=2007
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Query 16 RRSVIDQVVSSALPE-SSSADEVSAAVNAFISAQLPQELTELLEKI 60
R+++IDQV SS LPE + ++E+S + AFI+A++P L E+LEKI
Sbjct 1158 RQAIIDQVTSSILPEFYNKSEEISCVIRAFINAEVPNSLLEVLEKI 1203
> sce:YGL206C CHC1, SWA5; Chc1p; K04646 clathrin heavy chain
Length=1653
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 0/44 (0%)
Query 3 ELWAYVLRPENSYRRSVIDQVVSSALPESSSADEVSAAVNAFIS 46
+LW VL EN +RR +ID V+S +PE + + VS V AF++
Sbjct 960 DLWNKVLNQENIHRRQLIDSVISVGIPELTDPEPVSLTVQAFMT 1003
> bbo:BBOV_IV001820 21.m02773; clathrin heavy chain; K04646 clathrin
heavy chain
Length=1676
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query 12 ENSYRRSVIDQVVSSALPESSSADEVSAAVNAFISAQLPQELTELLEKI 60
++ R+ V +++V A P+SS+A E+S A+ A + A + +E+ LLE++
Sbjct 1008 DDDNRKHVCEELVILA-PDSSNASEISCALKALLDAGMNEEVIALLEQL 1055
> eco:b4395 ytjC, ECK4387, gpmB, JW4358; predicted phosphoglyceromutase
2, co-factor independent; K01834 phosphoglycerate
mutase [EC:5.4.2.1]
Length=215
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query 12 ENSYRRSVIDQVVSSALPESSSADEVSAAVNAFISA--QLPQ 51
E ++RR +++ V +PE S E+S VNA + + LPQ
Sbjct 100 EENWRRQLVNGTVDGRIPEGESMQELSDRVNAALESCRDLPQ 141
Lambda K H
0.311 0.124 0.329
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2069361540
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40