bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_6195_orf1
Length=130
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_067080 26S proteasome subunit 4, putative ; K03062 ... 123 2e-28
ath:AT4G29040 RPT2a; RPT2a (regulatory particle AAA-ATPase 2a)... 108 5e-24
ath:AT2G20140 26S protease regulatory complex subunit 4, putat... 108 6e-24
cpv:cgd4_1170 26S proteasome regulatory subunit S4 like AAA AT... 107 8e-24
pfa:PF10_0081 26S proteasome regulatory subunit 4, putative; K... 107 9e-24
tpv:TP01_0845 26S proteasome regulatory subunit 4; K03062 26S ... 106 2e-23
bbo:BBOV_IV009290 23.m06008; 26S protease regulatory subunit 4... 105 3e-23
sce:YDL007W RPT2, YHS4, YTA5; One of six ATPases of the 19S re... 97.1 1e-20
cel:F29G9.5 rpt-2; proteasome Regulatory Particle, ATPase-like... 97.1 1e-20
dre:415181 psmc1b, wu:fj14c10, zgc:86923; proteasome (prosome,... 94.7 6e-20
dre:336786 psmc1a, psmc1, wu:fb05d04, zgc:56516; proteasome (p... 94.4 8e-20
xla:380240 psmc1, MGC64535, pros26.4; proteasome (prosome, mac... 94.4 8e-20
mmu:19179 Psmc1, AI325227, P26s4, S4; protease (prosome, macro... 94.4 8e-20
hsa:5700 PSMC1, MGC24583, MGC8541, P26S4, S4, p56; proteasome ... 94.4 8e-20
cel:C10G11.8 ATPase; hypothetical protein; K03062 26S proteaso... 76.3 2e-14
xla:443908 psmc5, MGC53028, MGC80185, sug-1, sug1, tbp10; prot... 70.1 2e-12
hsa:5705 PSMC5, S8, SUG-1, SUG1, TBP10, TRIP1, p45, p45/SUG; p... 70.1 2e-12
mmu:19184 Psmc5, mSUG1; protease (prosome, macropain) 26S subu... 70.1 2e-12
dre:445285 psmc5, wu:fa14g03, wu:fb23a11, zgc:92464; proteasom... 70.1 2e-12
tgo:TGME49_061010 26S protease regulatory subunit 8, putative ... 69.7 2e-12
pfa:PFL2345c tat-binding protein homolog; K03066 26S proteasom... 69.3 3e-12
xla:397968 psmc5, xsug1; XSUG1 protein; K03066 26S proteasome ... 68.9 3e-12
ath:AT5G20000 26S proteasome AAA-ATPase subunit, putative; K03... 67.8 8e-12
ath:AT5G19990 RPT6A; RPT6A (REGULATORY PARTICLE TRIPLE-A ATPAS... 67.8 8e-12
bbo:BBOV_I000480 16.m00708; tat-binding protein-like protein; ... 66.2 3e-11
cpv:cgd6_920 26s protease regulatory subunit 8 ; K03066 26S pr... 66.2 3e-11
cel:Y49E10.1 rpt-6; proteasome Regulatory Particle, ATPase-lik... 65.9 3e-11
tpv:TP02_0893 26S proteasome regulatory subunit; K03066 26S pr... 65.5 5e-11
sce:YGL048C RPT6, CIM3, CRL3, SCB68, SUG1; One of six ATPases ... 64.7 8e-11
cel:F56F11.4 hypothetical protein; K03066 26S proteasome regul... 63.5 1e-10
bbo:BBOV_II004930 18.m06410; 26s proteasome aaa-ATPase subunit... 62.4 3e-10
tpv:TP04_0031 26S proteasome aaa-ATPase subunit Rpt3 (EC:3.6.4... 62.0 5e-10
tgo:TGME49_029950 26S protease regulatory subunit 6b, putative... 61.6 6e-10
cel:F23F12.6 rpt-3; proteasome Regulatory Particle, ATPase-lik... 60.8 9e-10
pfa:PFD0665c 26S proteasome AAA-ATPase subunit RPT3, putative ... 59.7 2e-09
cpv:cgd4_2540 26S proteasome regulatory subunit 26b like AAA A... 59.7 2e-09
ath:AT3G05530 RPT5A; RPT5A (REGULATORY PARTICLE TRIPLE-A ATPAS... 58.9 4e-09
ath:AT1G09100 RPT5B; RPT5B (26S proteasome AAA-ATPase subunit ... 58.5 5e-09
xla:398853 psmc4, MGC68784; proteasome (prosome, macropain) 26... 57.8 9e-09
ath:AT5G58290 RPT3; RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE ... 57.4 1e-08
hsa:652826 26S protease regulatory subunit 6B-like; K03063 26S... 56.6 2e-08
hsa:5704 PSMC4, MGC13687, MGC23214, MGC8570, MIP224, S6, TBP7;... 56.2 2e-08
mmu:23996 Psmc4, CIP21, MGC103150, MIP224; proteasome (prosome... 56.2 3e-08
cpv:cgd2_1350 26S proteasome regulatory subunit, S6a like AAA ... 56.2 3e-08
xla:779382 psmc6, MGC114813, cadp44, sug2; proteasome (prosome... 55.8 3e-08
dre:326884 psmc4, wu:fe38b10, zgc:63709; proteasome (prosome, ... 55.8 3e-08
sce:YDR394W RPT3, YNT1, YTA2; One of six ATPases of the 19S re... 55.5 4e-08
dre:100330292 26S protease regulatory subunit S10B-like 55.1 6e-08
dre:321585 psmc6, MGC101799, fb20g04, wu:fb20g04, wu:fc85c10; ... 55.1 6e-08
mmu:19182 Psmc3, TBP-1; proteasome (prosome, macropain) 26S su... 54.7 6e-08
> tgo:TGME49_067080 26S proteasome subunit 4, putative ; K03062
26S proteasome regulatory subunit T2
Length=441
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/62 (96%), Positives = 61/62 (98%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
VLLHNKTSSIVGIL+DEVDPLISVMKVEKAPLETY DIGGLEKQIQEVKEAVEFPLTHPE
Sbjct 151 VLLHNKTSSIVGILNDEVDPLISVMKVEKAPLETYADIGGLEKQIQEVKEAVEFPLTHPE 210
Query 129 FF 130
FF
Sbjct 211 FF 212
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 58/71 (81%), Gaps = 3/71 (4%)
Query 5 GHPGGNDDKKDKKKEKKPLEAAPPSHVGRRKKPKGA-MGASKLPNVTPVTKCRMRLLKLE 63
G PGG++D DKKKE+K LEAAPP+H+G+RKK +G S+LP VTP+TKCR+RLL+LE
Sbjct 10 GFPGGSED--DKKKERKRLEAAPPTHIGKRKKKGKGPVGHSRLPTVTPITKCRLRLLRLE 67
Query 64 RVKDYVLLHNK 74
R+KDY+LL +
Sbjct 68 RIKDYLLLEEE 78
> ath:AT4G29040 RPT2a; RPT2a (regulatory particle AAA-ATPase 2a);
ATPase; K03062 26S proteasome regulatory subunit T2
Length=443
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 99/203 (48%), Gaps = 84/203 (41%)
Query 7 PGGNDDKKDKKKEKKPLEAAPPSHVGRR-KKPKGAMGASKLPNVTPVTKCRMRLLKLERV 65
P G D KKEKK AAPP+ VGR+ +K KG A++LP VTP TKC++RLLKLER+
Sbjct 17 PDGGD-----KKEKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTPSTKCKLRLLKLERI 71
Query 66 KDYVLLHNK----------------------------------------------TSSI- 78
KDY+L+ + +SS+
Sbjct 72 KDYLLMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVG 131
Query 79 ----VGILS----DEVDPLISVM-----------------------KVEKAPLETYGDIG 107
VGILS D+++P S++ KVEKAPLE+Y DIG
Sbjct 132 PEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIG 191
Query 108 GLEKQIQEVKEAVEFPLTHPEFF 130
GLE QIQE+KEAVE PLTHPE +
Sbjct 192 GLEAQIQEIKEAVELPLTHPELY 214
> ath:AT2G20140 26S protease regulatory complex subunit 4, putative;
K03062 26S proteasome regulatory subunit T2
Length=443
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 103/211 (48%), Gaps = 85/211 (40%)
Query 5 GHPGGNDDKKDKK------KEKKPLEAAPPSHVGRR-KKPKGAMGASKLPNVTPVTKCRM 57
G GG + + D+K KEKK AAPP+ VGR+ +K KG A++LP VTP TKC++
Sbjct 4 GPSGGLNRQGDRKPDGGEKKEKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTPSTKCKL 63
Query 58 RLLKLERVKDYVLLHNK------------------------------------------- 74
RLLKLER+KDY+L+ +
Sbjct 64 RLLKLERIKDYLLMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENH 123
Query 75 ---TSSI-----VGILS----DEVDPLISVM-----------------------KVEKAP 99
+SS+ VGILS D+++P S++ KVEKAP
Sbjct 124 AIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAP 183
Query 100 LETYGDIGGLEKQIQEVKEAVEFPLTHPEFF 130
LE+Y DIGGLE QIQE+KEAVE PLTHPE +
Sbjct 184 LESYADIGGLEAQIQEIKEAVELPLTHPELY 214
> cpv:cgd4_1170 26S proteasome regulatory subunit S4 like AAA
ATpase ; K03062 26S proteasome regulatory subunit T2
Length=445
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 57/62 (91%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
VLLHNK S+VGI++DEVDPL+SVMKV+KAPLE+Y DIGGLE+QIQE+KEAVE PLTHPE
Sbjct 155 VLLHNKVYSVVGIMNDEVDPLVSVMKVDKAPLESYADIGGLEQQIQEIKEAVEIPLTHPE 214
Query 129 FF 130
+
Sbjct 215 LY 216
> pfa:PF10_0081 26S proteasome regulatory subunit 4, putative;
K03062 26S proteasome regulatory subunit T2
Length=448
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 57/62 (91%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
VLL+NKT+S+VGIL DEVDPL+SVMKVEKAPLE+Y DIGGLE QIQE+KEAVE PLTHPE
Sbjct 158 VLLNNKTNSVVGILLDEVDPLVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPE 217
Query 129 FF 130
+
Sbjct 218 LY 219
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query 23 LEAAPPSHVGRRKKPK-GAMGASKLPNVTPVTKCRMRLLKLERVKDYVLLH 72
LE+ P SH+G++KK G G SKLPNVTP TKCR++LLKLER+KDY+LL
Sbjct 34 LESVPISHMGKKKKKNKGTSGHSKLPNVTPNTKCRLKLLKLERIKDYLLLE 84
> tpv:TP01_0845 26S proteasome regulatory subunit 4; K03062 26S
proteasome regulatory subunit T2
Length=415
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 57/62 (91%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
VLLHNKT+SIVGIL D+VDPL+SVMKVEKAPLE+Y DIGGLE+QIQE+KEAVE PLT PE
Sbjct 125 VLLHNKTNSIVGILLDDVDPLVSVMKVEKAPLESYDDIGGLEEQIQEIKEAVELPLTRPE 184
Query 129 FF 130
+
Sbjct 185 LY 186
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 9/86 (10%)
Query 49 VTPVTKCRMRLLKLERVKDYVLLHNKTSSIVG----ILSDEVDPLISVMKVEKAPLETYG 104
+TP +KCR+RLLKLER+KDY+LL + + + + D LI + + +P+
Sbjct 27 LTPNSKCRLRLLKLERIKDYLLLEEEYITNKSLHKPLKTKNQDDLIKLDDIRGSPMS--- 83
Query 105 DIGGLEKQIQEVKEAVEFPLTHPEFF 130
+G LE+ I E A+ PE++
Sbjct 84 -VGTLEEIIDE-NHAIVTSSIGPEYY 107
> bbo:BBOV_IV009290 23.m06008; 26S protease regulatory subunit
4; K03062 26S proteasome regulatory subunit T2
Length=438
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 56/62 (90%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
VLLHNKT+S+VGIL D +DPL+S+MKVE+APLE+Y DIGGLE QIQE+KEAVE PLTHPE
Sbjct 148 VLLHNKTNSVVGILLDAIDPLVSLMKVERAPLESYSDIGGLEDQIQEIKEAVELPLTHPE 207
Query 129 FF 130
+
Sbjct 208 LY 209
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query 9 GNDDKKDKKKEKKPLEAAPPSHVGR-RKKPKGAMGASKLPNVTPVTKCRMRLLKLERVKD 67
N+ + K ++ P E PP G+ +KK + ++P VTP KCR+RLLKLER+KD
Sbjct 9 NNNQESKKNEDSTPREKPPPPVFGKHKKKQQRQFAPVRIPTVTPSAKCRLRLLKLERIKD 68
Query 68 YVLLH 72
Y+LL
Sbjct 69 YLLLE 73
> sce:YDL007W RPT2, YHS4, YTA5; One of six ATPases of the 19S
regulatory particle of the 26S proteasome involved in the degradation
of ubiquitinated substrates; required for normal peptide
hydrolysis by the core 20S particle; K03062 26S proteasome
regulatory subunit T2
Length=437
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 54/62 (87%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
VLLH+KT SIVG+L D+ DP++SVMK++K+P E+Y DIGGLE QIQE+KE+VE PLTHPE
Sbjct 147 VLLHHKTMSIVGVLQDDADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPE 206
Query 129 FF 130
+
Sbjct 207 LY 208
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query 5 GHPGGNDDKKDKKKEKKPLEAAPP--SHVGRRKKPKGAMGASKLPNVTPVTKCRMRLLKL 62
G G D KK K +KP + PP S GR+K+ G A KLPN+ P T+C+++LL++
Sbjct 4 GVSSGQDKKKKKGSNQKP-KYEPPVQSKFGRKKRKGGPATAEKLPNIYPSTRCKLKLLRM 62
Query 63 ERVKDYVLLHNKTSSIVGIL 82
ER+KD++LL + S IL
Sbjct 63 ERIKDHLLLEEEFVSNSEIL 82
> cel:F29G9.5 rpt-2; proteasome Regulatory Particle, ATPase-like
family member (rpt-2); K03062 26S proteasome regulatory subunit
T2
Length=443
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 56/62 (90%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
VLL++K +++G+LSD+ DP++SVMK+EKAP ETY D+GGL++QIQE+KEAVE PLTHPE
Sbjct 153 VLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPE 212
Query 129 FF 130
++
Sbjct 213 YY 214
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%), Gaps = 0/33 (0%)
Query 42 GASKLPNVTPVTKCRMRLLKLERVKDYVLLHNK 74
ASKLP VTP +CR++LLK ER+KDY+L+ +
Sbjct 48 AASKLPAVTPHARCRLKLLKSERIKDYLLMEQE 80
> dre:415181 psmc1b, wu:fj14c10, zgc:86923; proteasome (prosome,
macropain) 26S subunit, ATPase, 1b; K03062 26S proteasome
regulatory subunit T2
Length=440
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 54/62 (87%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
VLL++K +++G+L D+ DPL++VMKVEKAP ETY DIGGL+ QIQE+KE+VE PLTHPE
Sbjct 150 VLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPE 209
Query 129 FF 130
++
Sbjct 210 YY 211
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Query 28 PSHVGRRK-KPKGAMGASKLPNVTPVTKCRMRLLKLERVKDYVLLHNK 74
P+ VG+RK K KG ASKLP VTP T+CR++LLK +R+KDY+L+ +
Sbjct 30 PTRVGKRKRKSKGPDAASKLPLVTPHTQCRLKLLKQDRIKDYLLMEEE 77
> dre:336786 psmc1a, psmc1, wu:fb05d04, zgc:56516; proteasome
(prosome, macropain) 26S subunit, ATPase, 1a; K03062 26S proteasome
regulatory subunit T2
Length=440
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 54/62 (87%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
VLL++K +++G+L D+ DPL++VMKVEKAP ETY DIGGL+ QIQE+KE+VE PLTHPE
Sbjct 150 VLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDSQIQEIKESVELPLTHPE 209
Query 129 FF 130
++
Sbjct 210 YY 211
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 27/33 (81%), Gaps = 0/33 (0%)
Query 42 GASKLPNVTPVTKCRMRLLKLERVKDYVLLHNK 74
ASKLP VTP T+CR++LLK ER+KDY+L+ +
Sbjct 45 AASKLPLVTPHTQCRLKLLKQERIKDYLLMEEE 77
> xla:380240 psmc1, MGC64535, pros26.4; proteasome (prosome, macropain)
26S subunit, ATPase, 1; K03062 26S proteasome regulatory
subunit T2
Length=440
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 54/62 (87%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
VLL++K +++G+L D+ DPL++VMKVEKAP ETY DIGGL+ QIQE+KE+VE PLTHPE
Sbjct 150 VLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPE 209
Query 129 FF 130
++
Sbjct 210 YY 211
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Query 28 PSHVGRRKKPK-GAMGASKLPNVTPVTKCRMRLLKLERVKDYVLLHNK 74
P+ VG++KK G ASKLP VTP T+CR++LLKLER+KDY+L+ +
Sbjct 30 PTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEE 77
> mmu:19179 Psmc1, AI325227, P26s4, S4; protease (prosome, macropain)
26S subunit, ATPase 1; K03062 26S proteasome regulatory
subunit T2
Length=440
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 54/62 (87%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
VLL++K +++G+L D+ DPL++VMKVEKAP ETY DIGGL+ QIQE+KE+VE PLTHPE
Sbjct 150 VLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPE 209
Query 129 FF 130
++
Sbjct 210 YY 211
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Query 28 PSHVGRRKKPK-GAMGASKLPNVTPVTKCRMRLLKLERVKDYVLLHNK 74
P+ VG++KK G ASKLP VTP T+CR++LLKLER+KDY+L+ +
Sbjct 30 PTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEE 77
> hsa:5700 PSMC1, MGC24583, MGC8541, P26S4, S4, p56; proteasome
(prosome, macropain) 26S subunit, ATPase, 1; K03062 26S proteasome
regulatory subunit T2
Length=440
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 54/62 (87%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
VLL++K +++G+L D+ DPL++VMKVEKAP ETY DIGGL+ QIQE+KE+VE PLTHPE
Sbjct 150 VLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPE 209
Query 129 FF 130
++
Sbjct 210 YY 211
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Query 28 PSHVGRRKKPK-GAMGASKLPNVTPVTKCRMRLLKLERVKDYVLLHNK 74
P+ VG++KK G ASKLP VTP T+CR++LLKLER+KDY+L+ +
Sbjct 30 PTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEE 77
> cel:C10G11.8 ATPase; hypothetical protein; K03062 26S proteasome
regulatory subunit T2
Length=438
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 0/85 (0%)
Query 46 LPNVTPVTKCRMRLLKLERVKDYVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGD 105
+P ++ V K +RL L VK + S+IVG+L D++D KVEK P ET+ D
Sbjct 125 VPILSIVDKDLLRLNALVMVKAGGMFKTVPSAIVGVLDDKIDSNAMGHKVEKTPKETFDD 184
Query 106 IGGLEKQIQEVKEAVEFPLTHPEFF 130
IGG E QIQE+KE+VE PLTHPE++
Sbjct 185 IGGCESQIQELKESVELPLTHPEYY 209
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query 9 GNDDKKDKKKEKKPLEAAPPSHVGRRKKPKGAMGASKLPNVTPVTKCRMRLLKLERVKDY 68
GN +KK++KP AA + + +G A+KLP V P +C +RLLK+ R+ DY
Sbjct 2 GNKMALPQKKQEKPTHAA--MKIAMKSGRRGIENANKLPTVAPKRQCLVRLLKMNRIHDY 59
Query 69 VLL 71
+ L
Sbjct 60 LQL 62
> xla:443908 psmc5, MGC53028, MGC80185, sug-1, sug1, tbp10; proteasome
(prosome, macropain) 26S subunit, ATPase, 5; K03066
26S proteasome regulatory subunit T6
Length=415
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V L N + ++ IL ++VDPL+S+M VEK P TY IGGL+KQI+E+KE +E P+ HPE
Sbjct 123 VALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 182
Query 129 FF 130
F
Sbjct 183 LF 184
> hsa:5705 PSMC5, S8, SUG-1, SUG1, TBP10, TRIP1, p45, p45/SUG;
proteasome (prosome, macropain) 26S subunit, ATPase, 5; K03066
26S proteasome regulatory subunit T6
Length=398
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V L N + ++ IL ++VDPL+S+M VEK P TY IGGL+KQI+E+KE +E P+ HPE
Sbjct 106 VALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 165
Query 129 FF 130
F
Sbjct 166 LF 167
> mmu:19184 Psmc5, mSUG1; protease (prosome, macropain) 26S subunit,
ATPase 5; K03066 26S proteasome regulatory subunit T6
Length=406
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V L N + ++ IL ++VDPL+S+M VEK P TY IGGL+KQI+E+KE +E P+ HPE
Sbjct 114 VALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 173
Query 129 FF 130
F
Sbjct 174 LF 175
> dre:445285 psmc5, wu:fa14g03, wu:fb23a11, zgc:92464; proteasome
(prosome, macropain) 26S subunit, ATPase, 5; K03066 26S
proteasome regulatory subunit T6
Length=406
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V L N + ++ IL ++VDPL+S+M VEK P TY IGGL+KQI+E+KE +E P+ HPE
Sbjct 114 VALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 173
Query 129 FF 130
F
Sbjct 174 LF 175
> tgo:TGME49_061010 26S protease regulatory subunit 8, putative
; K03066 26S proteasome regulatory subunit T6
Length=409
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 0/66 (0%)
Query 65 VKDYVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPL 124
V V L N + + IL ++DPL+S+MKVEK P TY +GGLE+Q++EVKE +E P+
Sbjct 114 VNTRVALLNDSYRLHKILPTKIDPLVSLMKVEKVPESTYEMVGGLEQQVKEVKEVIELPI 173
Query 125 THPEFF 130
HPE F
Sbjct 174 KHPELF 179
> pfa:PFL2345c tat-binding protein homolog; K03066 26S proteasome
regulatory subunit T6
Length=435
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 45/62 (72%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V L+N + + IL +VDPL+S+MKVEK P TY +GGL++Q++EVKE +E P+ HPE
Sbjct 144 VALYNDSYKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPE 203
Query 129 FF 130
F
Sbjct 204 IF 205
> xla:397968 psmc5, xsug1; XSUG1 protein; K03066 26S proteasome
regulatory subunit T6
Length=461
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V L N + ++ IL ++VDPL+S+M VEK P TY IGGL+KQI+E+KE +E P+ HPE
Sbjct 109 VALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 168
Query 129 FF 130
F
Sbjct 169 HF 170
> ath:AT5G20000 26S proteasome AAA-ATPase subunit, putative; K03066
26S proteasome regulatory subunit T6
Length=419
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V L N + + +L +VDPL+++MKVEK P TY IGGL++QI+E+KE +E P+ HPE
Sbjct 126 VALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPE 185
Query 129 FF 130
F
Sbjct 186 LF 187
> ath:AT5G19990 RPT6A; RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE
6A); ATPase; K03066 26S proteasome regulatory subunit T6
Length=419
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V L N + + +L +VDPL+++MKVEK P TY IGGL++QI+E+KE +E P+ HPE
Sbjct 126 VALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPE 185
Query 129 FF 130
F
Sbjct 186 LF 187
> bbo:BBOV_I000480 16.m00708; tat-binding protein-like protein;
K03066 26S proteasome regulatory subunit T6
Length=405
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V L + + + IL +VDPL+++MKVEK P TY +GGLE+Q++EVKE +E P+ HPE
Sbjct 114 VALMSDSYKLHKILPTKVDPLVALMKVEKVPDSTYEMVGGLEQQVKEVKEVIELPIKHPE 173
Query 129 FF 130
F
Sbjct 174 IF 175
> cpv:cgd6_920 26s protease regulatory subunit 8 ; K03066 26S
proteasome regulatory subunit T6
Length=393
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 10/66 (15%)
Query 75 TSSIVGILSD----------EVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPL 124
T++ V +LSD +VDPL+S+MKVEK P TY +GGL++QI+E+KE +E P+
Sbjct 98 TNTRVALLSDSFKLHRIFPNKVDPLVSLMKVEKVPDSTYDMVGGLDEQIKEIKEVIELPI 157
Query 125 THPEFF 130
HPE F
Sbjct 158 KHPEIF 163
> cel:Y49E10.1 rpt-6; proteasome Regulatory Particle, ATPase-like
family member (rpt-6); K03066 26S proteasome regulatory
subunit T6
Length=416
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 44/62 (70%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V L + ++ +L ++VDPL+S+M VEK P TY +GGL+KQI+E+KE +E P+ HPE
Sbjct 124 VALRADSYALHKLLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPE 183
Query 129 FF 130
F
Sbjct 184 LF 185
> tpv:TP02_0893 26S proteasome regulatory subunit; K03066 26S
proteasome regulatory subunit T6
Length=393
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 39/50 (78%), Gaps = 0/50 (0%)
Query 81 ILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPEFF 130
IL +VDPL+++MKVEK P TY +GGLE+QI++VKE +E P+ HPE F
Sbjct 113 ILPTKVDPLVALMKVEKVPDSTYDMVGGLEEQIKQVKEVIELPIKHPEIF 162
> sce:YGL048C RPT6, CIM3, CRL3, SCB68, SUG1; One of six ATPases
of the 19S regulatory particle of the 26S proteasome involved
in the degradation of ubiquitinated substrates; bound by
ubiquitin-protein ligases Ubr1p and Ufd4p; localized mainly
to the nucleus throughout the cell cycle; K03066 26S proteasome
regulatory subunit T6
Length=405
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V L + + + +L ++ DPL+S+M VEK P TY +GGL KQI+E+KE +E P+ HPE
Sbjct 113 VCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPE 172
Query 129 FF 130
F
Sbjct 173 LF 174
> cel:F56F11.4 hypothetical protein; K03066 26S proteasome regulatory
subunit T6
Length=432
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V L +I +L +VDPL+S+M VEK P TY +GGL+ QI+E+KE +E P+ HPE
Sbjct 140 VALRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPE 199
Query 129 FF 130
F
Sbjct 200 LF 201
> bbo:BBOV_II004930 18.m06410; 26s proteasome aaa-ATPase subunit
Rpt3; K03063 26S proteasome regulatory subunit T3
Length=399
Score = 62.4 bits (150), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V LH + SIV +L E D I +M++ P +Y DIGGL+ Q QEV+EAVE PLT PE
Sbjct 110 VALHRHSHSIVDLLPPEADSSIQMMQISDRPDVSYADIGGLDAQKQEVREAVELPLTCPE 169
Query 129 FF 130
+
Sbjct 170 LY 171
> tpv:TP04_0031 26S proteasome aaa-ATPase subunit Rpt3 (EC:3.6.4.8);
K03063 26S proteasome regulatory subunit T3
Length=396
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V LH + S+V IL E D I +++V + P TY DIGG++ Q QE+KEAVE PLT P
Sbjct 107 VALHRHSHSVVDILPPEADSSIQMLQVSEKPDVTYADIGGMDSQKQEIKEAVELPLTCPS 166
Query 129 FF 130
+
Sbjct 167 LY 168
> tgo:TGME49_029950 26S protease regulatory subunit 6b, putative
; K03063 26S proteasome regulatory subunit T3
Length=409
Score = 61.6 bits (148), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V LH + S+V IL E D I +++++ P TY DIGG++ Q QE++EAVE PLT PE
Sbjct 120 VALHRHSHSVVDILPPEADSTIQTLQMQEKPDVTYSDIGGMDIQKQEIREAVELPLTCPE 179
Query 129 FF 130
+
Sbjct 180 LY 181
> cel:F23F12.6 rpt-3; proteasome Regulatory Particle, ATPase-like
family member (rpt-3); K03063 26S proteasome regulatory
subunit T3
Length=414
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V LH ++++V +L E D I +++ ++ P +YGDIGGL+ Q QEV+EAVE PLTH E
Sbjct 126 VALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGE 185
Query 129 FF 130
+
Sbjct 186 LY 187
> pfa:PFD0665c 26S proteasome AAA-ATPase subunit RPT3, putative
(EC:3.6.4.8); K03063 26S proteasome regulatory subunit T3
Length=392
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V LH + SIV IL E D I ++++ + P Y D+GGL+ Q QE+KEAVE PLT PE
Sbjct 103 VALHRHSHSIVNILPSESDSSIQLLQITERPNVKYTDLGGLDMQKQEMKEAVELPLTCPE 162
Query 129 FF 130
+
Sbjct 163 LY 164
> cpv:cgd4_2540 26S proteasome regulatory subunit 26b like AAA
ATpase ; K03063 26S proteasome regulatory subunit T3
Length=401
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V LH + +IV IL E D I ++++++ P TY DIGG++ Q QEV+EAVE PL PE
Sbjct 112 VALHRHSHAIVDILPPEADSSIQMLQMQEKPDVTYSDIGGMDIQKQEVREAVELPLVCPE 171
Query 129 FF 130
+
Sbjct 172 LY 173
> ath:AT3G05530 RPT5A; RPT5A (REGULATORY PARTICLE TRIPLE-A ATPASE
5A); ATPase/ calmodulin binding; K03065 26S proteasome regulatory
subunit T5
Length=424
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 0/64 (0%)
Query 67 DYVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTH 126
D V ++ + I+ L E D + M+V++ P E Y DIGGLEKQIQE+ EA+ P+TH
Sbjct 134 DLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTH 193
Query 127 PEFF 130
E F
Sbjct 194 KERF 197
> ath:AT1G09100 RPT5B; RPT5B (26S proteasome AAA-ATPase subunit
RPT5B); ATPase/ calmodulin binding; K03065 26S proteasome
regulatory subunit T5
Length=423
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 0/64 (0%)
Query 67 DYVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTH 126
D V ++ + I+ L E D + M+V++ P E Y DIGGLEKQIQE+ EA+ P+TH
Sbjct 133 DLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTH 192
Query 127 PEFF 130
E F
Sbjct 193 KEQF 196
> xla:398853 psmc4, MGC68784; proteasome (prosome, macropain)
26S subunit, ATPase, 4; K03063 26S proteasome regulatory subunit
T3
Length=420
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V LH ++++V +L E D I+++ ++ P Y DIGG++ Q QEV+EAVE PLTH E
Sbjct 132 VALHKHSNALVDVLPPEADSSITMLTADQKPDVLYSDIGGMDIQKQEVREAVELPLTHFE 191
Query 129 FF 130
+
Sbjct 192 LY 193
> ath:AT5G58290 RPT3; RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE
3); ATPase; K03063 26S proteasome regulatory subunit T3
Length=408
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V LH ++++V +L E D IS++ + P +Y DIGG + Q QE++EAVE PLTH E
Sbjct 120 VALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHE 179
Query 129 FF 130
+
Sbjct 180 LY 181
> hsa:652826 26S protease regulatory subunit 6B-like; K03063 26S
proteasome regulatory subunit T3
Length=414
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V LH ++++V +L E D I ++ ++ P Y DIGG++ Q QEV+EAVE PLTH E
Sbjct 126 VALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFE 185
Query 129 FF 130
+
Sbjct 186 LY 187
> hsa:5704 PSMC4, MGC13687, MGC23214, MGC8570, MIP224, S6, TBP7;
proteasome (prosome, macropain) 26S subunit, ATPase, 4; K03063
26S proteasome regulatory subunit T3
Length=418
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V LH ++++V +L E D I ++ ++ P Y DIGG++ Q QEV+EAVE PLTH E
Sbjct 130 VALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFE 189
Query 129 FF 130
+
Sbjct 190 LY 191
> mmu:23996 Psmc4, CIP21, MGC103150, MIP224; proteasome (prosome,
macropain) 26S subunit, ATPase, 4; K03063 26S proteasome
regulatory subunit T3
Length=418
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V LH ++++V +L E D I ++ ++ P Y DIGG++ Q QEV+EAVE PLTH E
Sbjct 130 VALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFE 189
Query 129 FF 130
+
Sbjct 190 LY 191
> cpv:cgd2_1350 26S proteasome regulatory subunit, S6a like AAA
ATpase ; K03065 26S proteasome regulatory subunit T5
Length=461
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 0/64 (0%)
Query 67 DYVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTH 126
D V ++ + I+ L E D + M+V++ P+E Y DIGGL+KQIQE+ EA+ P+TH
Sbjct 170 DLVGVNKDSYLILDKLPPEYDSRVKAMEVDERPMEEYSDIGGLDKQIQELVEAIVLPMTH 229
Query 127 PEFF 130
E F
Sbjct 230 KERF 233
> xla:779382 psmc6, MGC114813, cadp44, sug2; proteasome (prosome,
macropain) 26S subunit, ATPase, 6; K03064 26S proteasome
regulatory subunit T4
Length=389
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query 52 VTKCRMRLLKLE-RVKDYVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLE 110
V CR +L K + + V L T +I+ L EVDPL+ M E +Y +IGGL
Sbjct 80 VVGCRRQLDKSKLKAGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGSVSYSEIGGLS 139
Query 111 KQIQEVKEAVEFPLTHPEFF 130
+QI+E++E +E PLT+PE F
Sbjct 140 EQIRELREVIELPLTNPELF 159
> dre:326884 psmc4, wu:fe38b10, zgc:63709; proteasome (prosome,
macropain) 26S subunit, ATPase, 4; K03063 26S proteasome regulatory
subunit T3
Length=418
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V LH ++++V +L E D I ++ ++ P Y DIGG++ Q QEV+EAVE PLTH E
Sbjct 130 VALHKHSNALVDVLPPEADSSIMMLTSDQKPDVLYSDIGGMDIQKQEVREAVELPLTHFE 189
Query 129 FF 130
+
Sbjct 190 LY 191
> sce:YDR394W RPT3, YNT1, YTA2; One of six ATPases of the 19S
regulatory particle of the 26S proteasome involved in the degradation
of ubiquitinated substrates; substrate of N-acetyltransferase
B; K03063 26S proteasome regulatory subunit T3
Length=428
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V LH ++++V IL + D ISVM + P TY D+GGL+ Q QE++EAVE PL +
Sbjct 137 VALHRHSNALVDILPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQAD 196
Query 129 FF 130
+
Sbjct 197 LY 198
> dre:100330292 26S protease regulatory subunit S10B-like
Length=350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V L T +I+ L EVDPL+ M E +Y +IGGL +QI+E++E +E PLT+PE
Sbjct 98 VALDMTTLTIMRYLPREVDPLVYNMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPE 157
Query 129 FF 130
F
Sbjct 158 LF 159
> dre:321585 psmc6, MGC101799, fb20g04, wu:fb20g04, wu:fc85c10;
proteasome (prosome, macropain) 26S subunit, ATPase, 6; K03064
26S proteasome regulatory subunit T4
Length=389
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 0/62 (0%)
Query 69 VLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPE 128
V L T +I+ L EVDPL+ M E +Y +IGGL +QI+E++E +E PLT+PE
Sbjct 98 VALDMTTLTIMRYLPREVDPLVYNMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPE 157
Query 129 FF 130
F
Sbjct 158 LF 159
> mmu:19182 Psmc3, TBP-1; proteasome (prosome, macropain) 26S
subunit, ATPase 3; K03065 26S proteasome regulatory subunit
T5
Length=442
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query 59 LLKLERVK--DYVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEV 116
L+ E++K D V ++ + I+ L E D + M+V++ P E Y DIGGL+KQIQE+
Sbjct 142 LVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQEL 201
Query 117 KEAVEFPLTHPEFF 130
EA+ P+ H E F
Sbjct 202 VEAIVLPMNHKEKF 215
Lambda K H
0.313 0.136 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2039374804
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40