bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_5945_orf1
Length=100
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_090950 clathrin heavy chain, putative ; K04646 clat... 152 4e-37
cpv:cgd8_1270 clathrin heavy chain ; K04646 clathrin heavy chain 113 2e-25
ath:AT3G08530 clathrin heavy chain, putative; K04646 clathrin ... 96.7 2e-20
ath:AT3G11130 clathrin heavy chain, putative; K04646 clathrin ... 96.7 2e-20
pfa:PFL0930w clathrin heavy chain, putative; K04646 clathrin h... 93.2 2e-19
hsa:1213 CLTC, CHC, CHC17, CLH-17, CLTCL2, Hc, KIAA0034; clath... 83.2 2e-16
mmu:67300 Cltc, 3110065L21Rik, CHC, MGC92975, R74732; clathrin... 83.2 2e-16
dre:503600 cltcb, im:7145213, zgc:113234; clathrin, heavy poly... 82.8 3e-16
dre:323579 cltca, cb1033, cltc, wu:fc03e11, wu:fc49a11, wu:fd0... 82.8 3e-16
hsa:8218 CLTCL1, CHC22, CLH22, CLTCL, CLTD, FLJ36032; clathrin... 82.4 3e-16
cel:T20G5.1 chc-1; Clathrin Heavy Chain family member (chc-1);... 81.6 5e-16
sce:YGL206C CHC1, SWA5; Chc1p; K04646 clathrin heavy chain 78.6 4e-15
xla:444287 cltc, MGC80936; clathrin, heavy chain (Hc); K04646 ... 77.8 8e-15
dre:100330183 cltc; clathrin, heavy chain (Hc) 76.3 3e-14
tpv:TP03_0480 clathrin heavy chain; K04646 clathrin heavy chain 67.4 1e-11
bbo:BBOV_IV001820 21.m02773; clathrin heavy chain; K04646 clat... 50.8 1e-06
pfa:PFL1540c phenylalanyl-tRNA synthetase alpha chain, putativ... 28.9 4.6
hsa:27152 INTU, FLJ41326, INT, KIAA1284, PDZD6, PDZK6; inturne... 28.5 5.3
> tgo:TGME49_090950 clathrin heavy chain, putative ; K04646 clathrin
heavy chain
Length=1731
Score = 152 bits (383), Expect = 4e-37, Method: Composition-based stats.
Identities = 63/92 (68%), Positives = 78/92 (84%), Gaps = 0/92 (0%)
Query 1 YATYDSTKLMDHCRQHKGRMNIPRLIRTCEKCCLWEEAVYLHTIYDEYEQAANCMILHPM 60
YATY+S+KLMD+ RQH G++NIPRLIR CE+ LW+EAVYLH YDEYEQAANC+I+HP
Sbjct 1363 YATYESSKLMDYIRQHSGKVNIPRLIRACERQSLWKEAVYLHMNYDEYEQAANCLIMHPA 1422
Query 61 AWQHDQFIQVIQKVSNVELLYHAISFYLEEHP 92
AW H+ F+Q++QKVSN ++ Y AISFYLE HP
Sbjct 1423 AWSHELFVQILQKVSNSDVFYRAISFYLEYHP 1454
> cpv:cgd8_1270 clathrin heavy chain ; K04646 clathrin heavy chain
Length=2007
Score = 113 bits (282), Expect = 2e-25, Method: Composition-based stats.
Identities = 47/93 (50%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query 1 YATYDSTKLMDHCRQHKGRMNIPRLIRTCEKCCLWEEAVYLHTIYDEYEQAANCMILHPM 60
YA Y KLMD+C + GR+NIP+L R CE+ LW E VYL+ Y E++QA +I HP
Sbjct 1558 YAKYTPEKLMDYCSSYSGRINIPKLTRICEQRQLWNEVVYLYLQYQEFDQAVLTVISHPK 1617
Query 61 -AWQHDQFIQVIQKVSNVELLYHAISFYLEEHP 92
AW++DQF+ ++Q V+NV++LY +++FYL+EHP
Sbjct 1618 EAWKNDQFLSILQNVTNVDILYKSMTFYLQEHP 1650
> ath:AT3G08530 clathrin heavy chain, putative; K04646 clathrin
heavy chain
Length=1703
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Query 1 YATYDSTKLMDHCRQHKGRMNIPRLIRTCEKCCLWEEAVYLHTIYDEYEQAANCMILH-P 59
YA Y KLM+H + R+NIP+LIR C++ W+E YL+ YDE++ AA ++ H P
Sbjct 1338 YARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWQELTYLYIQYDEFDNAATTVMNHSP 1397
Query 60 MAWQHDQFIQVIQKVSNVELLYHAISFYLEEHP 92
AW+H QF ++ KV+NVEL Y A+ FYL+EHP
Sbjct 1398 EAWEHMQFKDIVAKVANVELYYKAVHFYLQEHP 1430
> ath:AT3G11130 clathrin heavy chain, putative; K04646 clathrin
heavy chain
Length=1705
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Query 1 YATYDSTKLMDHCRQHKGRMNIPRLIRTCEKCCLWEEAVYLHTIYDEYEQAANCMILH-P 59
YA Y KLM+H + R+NIP+LIR C++ W+E YL+ YDE++ AA ++ H P
Sbjct 1338 YARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWQELTYLYIQYDEFDNAATTVMNHSP 1397
Query 60 MAWQHDQFIQVIQKVSNVELLYHAISFYLEEHP 92
AW+H QF ++ KV+NVEL Y A+ FYL+EHP
Sbjct 1398 EAWEHMQFKDIVAKVANVELYYKAVHFYLQEHP 1430
> pfa:PFL0930w clathrin heavy chain, putative; K04646 clathrin
heavy chain
Length=1997
Score = 93.2 bits (230), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/101 (47%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query 1 YATYDSTKLMDHCRQHKGRMNIPRLIRTCEKCCLWEEAVYLHTIYDEYEQAANCMILH-P 59
YA Y KLM+ R + +MN +LI CE L +EAVYL+ YDEY A + +I H P
Sbjct 1645 YAKYKPEKLMEFIRNYTNKMNTRKLIDVCENEYLLKEAVYLYISYDEYNLAVDTIIKHSP 1704
Query 60 MAWQHDQFIQVIQKVSNVELLYHAISFYLEEHPLQLCALLK 100
A+ D F+QVI KV+N ++++ I FY+EEHPL L LLK
Sbjct 1705 TAYTADTFMQVIHKVTNSDIIHKVIDFYIEEHPLNLYNLLK 1745
> hsa:1213 CLTC, CHC, CHC17, CLH-17, CLTCL2, Hc, KIAA0034; clathrin,
heavy chain (Hc); K04646 clathrin heavy chain
Length=1675
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query 1 YATYDSTKLMDHCRQHKGRMNIPRLIRTCEKCCLWEEAVYLHTIYDEYEQAANCMILHPM 60
Y+ + K+ +H R+NIP+++R E+ LW E V+L+ Y+EY+ A M+ HP
Sbjct 1324 YSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPT 1383
Query 61 -AWQHDQFIQVIQKVSNVELLYHAISFYLEEHP 92
AW+ QF +I KV+NVEL Y AI FYLE P
Sbjct 1384 DAWKEGQFKDIITKVANVELYYRAIQFYLEFKP 1416
> mmu:67300 Cltc, 3110065L21Rik, CHC, MGC92975, R74732; clathrin,
heavy polypeptide (Hc); K04646 clathrin heavy chain
Length=1675
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query 1 YATYDSTKLMDHCRQHKGRMNIPRLIRTCEKCCLWEEAVYLHTIYDEYEQAANCMILHPM 60
Y+ + K+ +H R+NIP+++R E+ LW E V+L+ Y+EY+ A M+ HP
Sbjct 1324 YSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPT 1383
Query 61 -AWQHDQFIQVIQKVSNVELLYHAISFYLEEHP 92
AW+ QF +I KV+NVEL Y AI FYLE P
Sbjct 1384 DAWKEGQFKDIITKVANVELYYKAIQFYLEFKP 1416
> dre:503600 cltcb, im:7145213, zgc:113234; clathrin, heavy polypeptide
b (Hc); K04646 clathrin heavy chain
Length=1677
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query 1 YATYDSTKLMDHCRQHKGRMNIPRLIRTCEKCCLWEEAVYLHTIYDEYEQAANCMILHPM 60
Y+ + K+ +H R+NIP+++R E+ LW E V+L+ Y+EY+ A M+ HP
Sbjct 1324 YSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMMNHPA 1383
Query 61 -AWQHDQFIQVIQKVSNVELLYHAISFYLEEHP 92
AW+ QF +I KV+NVEL Y A+ FYLE P
Sbjct 1384 DAWKESQFKDIITKVANVELYYRAVQFYLEFKP 1416
> dre:323579 cltca, cb1033, cltc, wu:fc03e11, wu:fc49a11, wu:fd07f02;
clathrin, heavy polypeptide a (Hc); K04646 clathrin
heavy chain
Length=1680
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query 1 YATYDSTKLMDHCRQHKGRMNIPRLIRTCEKCCLWEEAVYLHTIYDEYEQAANCMILHPM 60
Y+ + K+ +H R+NIP+++R E+ LW E V+L+ Y+E++ A M+ HP
Sbjct 1324 YSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMMSHPT 1383
Query 61 -AWQHDQFIQVIQKVSNVELLYHAISFYLEEHP 92
AW+ QF +I KV+NVEL Y AI FYLE P
Sbjct 1384 DAWKEGQFKDIITKVANVELYYKAIQFYLEFRP 1416
> hsa:8218 CLTCL1, CHC22, CLH22, CLTCL, CLTD, FLJ36032; clathrin,
heavy chain-like 1; K04646 clathrin heavy chain
Length=1583
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query 1 YATYDSTKLMDHCRQHKGRMNIPRLIRTCEKCCLWEEAVYLHTIYDEYEQAANCMILHPM 60
Y+ + K+++H R+NIP+++R E+ LW E V+L+ Y+EY+ A M+ HP
Sbjct 1324 YSKFKPQKMLEHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAVLTMMSHPT 1383
Query 61 -AWQHDQFIQVIQKVSNVELLYHAISFYLEEHP 92
AW+ QF +I KV+NVEL Y A+ FYL+ P
Sbjct 1384 EAWKEGQFKDIITKVANVELCYRALQFYLDYKP 1416
> cel:T20G5.1 chc-1; Clathrin Heavy Chain family member (chc-1);
K04646 clathrin heavy chain
Length=1681
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query 1 YATYDSTKLMDHCRQHKGRMNIPRLIRTCEKCCLWEEAVYLHTIYDEYEQAANCMILHPM 60
Y+ Y K+ +H R+NIP+++R E+ LW E V+L+ Y+EY+ AA M+ HP
Sbjct 1326 YSKYKPEKMREHLELFWSRVNIPKVLRAAEQAHLWSELVFLYDKYEEYDNAALTMMQHPT 1385
Query 61 -AWQHDQFIQVIQKVSNVELLYHAISFYLEEHP 92
+W+ F +VI KV+NVEL Y A+ FYL+ P
Sbjct 1386 ESWREQHFKEVIAKVANVELYYKAMQFYLDYKP 1418
> sce:YGL206C CHC1, SWA5; Chc1p; K04646 clathrin heavy chain
Length=1653
Score = 78.6 bits (192), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query 1 YATYDSTKLMDHCRQHKGRMNIPRLIRTCEKCCLWEEAVYLHTIYDEYEQAANCMILHPM 60
Y+ Y+ K +H + R+NIP++IR E+ LW E V+L+ YDE++ AA +I
Sbjct 1330 YSKYEPDKTFEHLKLFWSRINIPKVIRAVEQAHLWSELVFLYAHYDEWDNAALTLIEKST 1389
Query 61 A-WQHDQFIQVIQKVSNVELLYHAISFYLEEHPLQLCALL 99
H F +V+ KVSN+E+ Y AI+FY++ HP L LL
Sbjct 1390 KDLDHAYFKEVVVKVSNLEIYYKAINFYVKFHPSLLVDLL 1429
> xla:444287 cltc, MGC80936; clathrin, heavy chain (Hc); K04646
clathrin heavy chain
Length=1675
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query 1 YATYDSTKLMDHCRQHKGRMNIPRLIRTCEKCCLWEEAVYLHTIYDEYEQAANCMILHPM 60
Y+ + K+ +H R+NIP+++R E+ LW E V+L+ Y+E++ A M+ H
Sbjct 1324 YSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMMNHAT 1383
Query 61 -AWQHDQFIQVIQKVSNVELLYHAISFYLEEHP 92
AW+ QF +I KV+NVEL Y AI FYLE P
Sbjct 1384 DAWKEGQFKDIITKVANVELYYKAIHFYLEFKP 1416
> dre:100330183 cltc; clathrin, heavy chain (Hc)
Length=951
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query 1 YATYDSTKLMDHCRQHKGRMNIPRLIRTCEKCCLWEEAVYLHTIYDEYEQAANCMILHPM 60
Y+ Y ++ +H R+NIP+++R E+ LW E V+L+ Y+EY+ A M+ HP
Sbjct 830 YSKYKPQRMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAILTMMNHPT 889
Query 61 -AWQHDQFIQVIQKVSNVELLYHAISFYLEEHP 92
AW+ F ++I KV+NVEL Y ++ FYL+ P
Sbjct 890 DAWRDATFKELIGKVANVELYYKSLQFYLDYKP 922
> tpv:TP03_0480 clathrin heavy chain; K04646 clathrin heavy chain
Length=1696
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query 2 ATYDSTKLMDHCRQ---HKGRMNIPRLIRTCEKCCLWEEAVYLHTIYDEYEQAANCMILH 58
A Y LM+H R +NI + R C LW+EAV+L+TI D+ ++A M LH
Sbjct 1402 AKYHPELLMEHLRNVAFESNSLNISKTARECSNLWLWKEAVFLYTI-DDSDKAILSMTLH 1460
Query 59 PMAWQHDQFIQVIQKVSNVELLYHAISFYLEEHPLQLCALL 99
P ++ D F + + VSN E++Y A+ F ++++P + LL
Sbjct 1461 PECFEQDLFFRTLNNVSNTEVIYKALYFCIQQYPTLVPKLL 1501
> bbo:BBOV_IV001820 21.m02773; clathrin heavy chain; K04646 clathrin
heavy chain
Length=1676
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query 2 ATYDSTKLMDHCRQHKGR------MNIPRLIRTCEKCCLWEEAVYLHTIYDEYEQAANCM 55
A Y +LM+H + + +N R+ R C LW+EAVYL+++ D + A M
Sbjct 1365 AKYKPEELMNHFKTNFTTEELLVCINTARVARECCNLWLWQEAVYLYSL-DTPDTALISM 1423
Query 56 ILH-PMAWQHDQFIQVIQKVSNVELLYHAISFYLEEHPLQLCALL 99
I H +AW F + +N E LY AI F ++ PL L LL
Sbjct 1424 IAHYGLAWDEKLFFETAATANNPEALYKAIHFCIQCKPLLLSRLL 1468
> pfa:PFL1540c phenylalanyl-tRNA synthetase alpha chain, putative
(EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha
chain [EC:6.1.1.20]
Length=556
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 11/77 (14%)
Query 12 HCRQHKGRMNIPRLIRTCEKCCLWEEAVYLHTIYDEYEQAANCMILHPMAWQHDQFIQVI 71
H +Q + +N+P EE +Y +Y+ ++ + W +D FI+ I
Sbjct 435 HIQQKQKIINMPH-----------EEVLYFSNLYNIKDEQRDLSFYSNEQWNNDDFIKNI 483
Query 72 QKVSNVELLYHAISFYL 88
++ N++ L+ + YL
Sbjct 484 MELKNIKNLHFLKTVYL 500
> hsa:27152 INTU, FLJ41326, INT, KIAA1284, PDZD6, PDZK6; inturned
planar cell polarity effector homolog (Drosophila)
Length=942
Score = 28.5 bits (62), Expect = 5.3, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query 7 TKLMDHCRQHKGRMNIPRLIRTCEKCCLWEEAVYLHTIYDEYEQAAN 53
T ++ Q G ++ P+LI+ +CCL AV+ T+ +E ++ N
Sbjct 814 TPTLEEVAQLSGSIH-PQLIKNFHQCCLSIRAVFQQTLVEEKKKGLN 859
Lambda K H
0.327 0.137 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2041372988
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40