bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_5262_orf1
Length=84
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_090850 WD-40 repeat protein, putative ; K13111 WD40... 120 8e-28
ath:AT1G73720 transducin family protein / WD-40 repeat family ... 67.8 9e-12
dre:393168 smu1, MGC56147, zgc:56147; smu-1 suppressor of mec-... 56.6 2e-08
mmu:74255 Smu1, 2600001O03Rik, 2610203K23Rik, AB044414, AI8450... 55.1 6e-08
hsa:55234 SMU1, BWD, DKFZp761L0916, FLJ10805, FLJ10870, FLJ119... 55.1 6e-08
xla:431914 smu1, MGC81475; smu-1 suppressor of mec-8 and unc-5... 55.1 6e-08
tpv:TP01_0202 hypothetical protein; K13111 WD40 repeat-contain... 51.6 7e-07
bbo:BBOV_IV005340 23.m06217; WD domain, G-beta repeat containi... 50.8 1e-06
dre:570074 WD40 repeat-containing protein SMU1-like; K13111 WD... 49.3 3e-06
pfa:MAL13P1.54 conserved Plasmodium protein, unknown function;... 47.4 1e-05
sce:YCR057C PWP2, UTP1, YCR055C, YCR058C; Conserved 90S pre-ri... 43.1 2e-04
cel:CC4.3 smu-1; Suppressor of Mec and Unc defects family memb... 43.1 2e-04
sce:YIL046W MET30, ZRG11; F-box protein containing five copies... 39.7 0.002
xla:734637 hypothetical protein MGC115367; K14558 periodic try... 39.3 0.003
sce:YMR146C TIF34; Tif34p; K03246 translation initiation facto... 38.9 0.005
dre:563124 strn3, GS2NA, KIAA1333, MGC175239, id:ibd1241, si:b... 37.7 0.009
mmu:50754 Fbxw7, 1110001A17Rik, AGO, Cdc4, Fbw7, Fbwd6, Fbx30,... 37.4 0.012
xla:734230 fbxw7; F-box and WD repeat domain containing 7; K10... 37.0 0.017
dre:393827 wdr61, MGC77675, zgc:77675; WD repeat domain 61; K1... 36.6 0.019
hsa:5822 PWP2, EHOC-17, PWP2H; PWP2 periodic tryptophan protei... 36.6 0.019
xla:100049143 atg16l1; ATG16 autophagy related 16-like 1 36.6
hsa:55294 FBXW7, AGO, CDC4, DKFZp686F23254, FBW6, FBW7, FBX30,... 36.6 0.020
ath:AT2G46280 TRIP-1; TRIP-1 (TGF-BETA RECEPTOR INTERACTING PR... 36.6 0.021
mmu:77040 Atg16l1, 1500009K01Rik, Apg16l, Atg16l, WDR30; autop... 36.6 0.022
hsa:55054 ATG16L1, APG16L, ATG16A, ATG16L, FLJ00045, FLJ10035,... 36.6 0.022
dre:564991 fbxw7, si:ch211-208n2.1; F-box and WD repeat domain... 36.2 0.026
ath:AT2G46290 eukaryotic translation initiation factor 3 subun... 36.2 0.027
mmu:67337 Cstf1, 1700057K18Rik, AI788832; cleavage stimulation... 35.8 0.032
cel:F55F8.3 hypothetical protein; K14558 periodic tryptophan p... 35.8 0.033
cel:K10B2.1 lin-23; abnormal cell LINeage family member (lin-2... 35.4 0.042
hsa:1477 CSTF1, CstF-50, CstFp50; cleavage stimulation factor,... 35.4 0.042
ath:AT4G02730 transducin family protein / WD-40 repeat family ... 35.4 0.042
mmu:213980 Fbxw10, Fbw10, HREP, SM25H2, SM2SH2; F-box and WD-4... 35.4 0.048
dre:266990 pwp2h, cb471, zgc:56063; PWP2 periodic tryptophan p... 34.7 0.077
dre:394014 wdr1, MGC55793, wu:fa66e09, zgc:55793, zgc:77547; W... 34.7 0.081
mmu:216156 Wdr18, 2310012I10Rik, AU044733, AW122032, MGC106215... 34.7 0.082
mmu:319555 Nwd1, A230063L24Rik; NACHT and WD repeat domain con... 34.3 0.089
cpv:cgd2_2910 hypothetical protein ; K14558 periodic tryptopha... 34.3 0.094
mmu:110816 Pwp2, 6530411D08Rik, MGC117973, Pwp2h, wdp103; PWP2... 34.3 0.096
ath:AT5G16750 TOZ; TOZ (TORMOZEMBRYO DEFECTIVE); nucleotide bi... 34.3 0.10
dre:406825 fbxw11b, btrc2, fbxw11a, wu:fa12e12, wu:fb11f03, zg... 34.3 0.11
cel:Y74C10AR.1 eif-3.I; Eukaryotic Initiation Factor family me... 33.9 0.12
tgo:TGME49_043740 flagellar WD-repeat protein PF20, putative (... 33.9 0.12
sce:YGL137W SEC27; Essential beta'-coat protein of the COPI co... 33.9 0.12
dre:334373 fbxw11a, btrc2, fbxw11, fbxw11b, fbxw1b, wu:fd14d12... 33.9 0.13
xla:394362 btrc, MGC83554, beta-TrCP, betaTrCP, btrc-a, btrcp,... 33.9 0.14
xla:380144 gnb1, MGC68852; guanine nucleotide binding protein ... 33.5 0.15
xla:380378 gnb3, MGC130764, MGC68913; guanine nucleotide bindi... 33.5 0.15
dre:541370 gnb2, im:7138539, zgc:113357; guanine nucleotide bi... 33.5 0.16
sce:YLR129W DIP2, UTP12; Dip2p; K14556 U3 small nucleolar RNA-... 33.5 0.17
> tgo:TGME49_090850 WD-40 repeat protein, putative ; K13111 WD40
repeat-containing protein SMU1
Length=521
Score = 120 bits (302), Expect = 8e-28, Method: Composition-based stats.
Identities = 51/85 (60%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
Query 1 PDNTRIITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQCLPSVMSIILAPRNVG-MD 59
PDNTR++TGSADGK+K+WDAKTQDCL TF PP+PP+M A Q LP++ +IILAP++ D
Sbjct 360 PDNTRVVTGSADGKVKIWDAKTQDCLHTFAPPLPPYMNASQHLPAINNIILAPKHGSEKD 419
Query 60 LFYVCTKSNTISLMNYSGKTINSWS 84
+ YVC+K++TI LM G I +WS
Sbjct 420 MIYVCSKTSTIMLMTLDGHAIKTWS 444
Score = 28.1 bits (61), Expect = 6.9, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 0/28 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTF 29
D+ + TGS DG++K+W T C F
Sbjct 276 DSEVLATGSQDGQLKVWIVATGQCARKF 303
> ath:AT1G73720 transducin family protein / WD-40 repeat family
protein; K13111 WD40 repeat-containing protein SMU1
Length=511
Score = 67.8 bits (164), Expect = 9e-12, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQCLPSVMSIILAPRNVGMDLF 61
D +RIIT S+D +K+WD+KT DCL TF PP PP + SV SI L P+N +
Sbjct 358 DGSRIITASSDCTVKVWDSKTTDCLQTFKPP-PPLRGTD---ASVNSIHLFPKNT--EHI 411
Query 62 YVCTKSNTISLMNYSGKTINSWS 84
VC K+++I +M G+ + S+S
Sbjct 412 VVCNKTSSIYIMTLQGQVVKSFS 434
Score = 31.2 bits (69), Expect = 0.94, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 0/28 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTF 29
D+ + +GS DGKIK+W +T C+ F
Sbjct 274 DSEMLASGSQDGKIKIWRIRTGVCIRRF 301
> dre:393168 smu1, MGC56147, zgc:56147; smu-1 suppressor of mec-8
and unc-52 homolog (C. elegans); K13111 WD40 repeat-containing
protein SMU1
Length=513
Score = 56.6 bits (135), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Query 1 PDNTRIITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQCLPSVMSIILAPRNVGMDL 60
PD I+ S+DG +K+W+ KT +C STF + +V ++IL P+N +
Sbjct 359 PDGHHAISASSDGTVKVWNMKTTECTSTFK----SLGTSAGTDITVNNVILLPKNP--EH 412
Query 61 FYVCTKSNTISLMNYSGKTINSWS 84
F VC +SNT+ +MN G+ + S+S
Sbjct 413 FVVCNRSNTVVIMNMQGQIVRSFS 436
Score = 30.4 bits (67), Expect = 1.6, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQCL 43
D + TG+ DGKIK+W ++ CL + H + CL
Sbjct 275 DTEMLATGAQDGKIKVWKIQSGQCLRRYE---RAHSKGVTCL 313
> mmu:74255 Smu1, 2600001O03Rik, 2610203K23Rik, AB044414, AI845086,
AW556129, Bwd; smu-1 suppressor of mec-8 and unc-52 homolog
(C. elegans); K13111 WD40 repeat-containing protein SMU1
Length=513
Score = 55.1 bits (131), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQCLPSVMSIILAPRNVGMDLF 61
D II+ S+DG +K+W+ KT +C +TF +V S+IL P+N + F
Sbjct 360 DGHYIISASSDGTVKIWNMKTTECSNTFK----SLGSTAGTDITVNSVILLPKNP--EHF 413
Query 62 YVCTKSNTISLMNYSGKTINSWS 84
VC +SNT+ +MN G+ + S+S
Sbjct 414 VVCNRSNTVVIMNMQGQIVRSFS 436
Score = 31.6 bits (70), Expect = 0.61, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQCL 43
D + TG+ DGKIK+W ++ CL F H + CL
Sbjct 275 DTEMLATGAQDGKIKVWKIQSGQCLRRFE---RAHSKGVTCL 313
> hsa:55234 SMU1, BWD, DKFZp761L0916, FLJ10805, FLJ10870, FLJ11970,
MGC117363, RP11-54K16.3, SMU-1, fSAP57; smu-1 suppressor
of mec-8 and unc-52 homolog (C. elegans); K13111 WD40 repeat-containing
protein SMU1
Length=513
Score = 55.1 bits (131), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQCLPSVMSIILAPRNVGMDLF 61
D II+ S+DG +K+W+ KT +C +TF +V S+IL P+N + F
Sbjct 360 DGHYIISASSDGTVKIWNMKTTECSNTFK----SLGSTAGTDITVNSVILLPKNP--EHF 413
Query 62 YVCTKSNTISLMNYSGKTINSWS 84
VC +SNT+ +MN G+ + S+S
Sbjct 414 VVCNRSNTVVIMNMQGQIVRSFS 436
Score = 31.6 bits (70), Expect = 0.61, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQCL 43
D + TG+ DGKIK+W ++ CL F H + CL
Sbjct 275 DTEMLATGAQDGKIKVWKIQSGQCLRRFE---RAHSKGVTCL 313
> xla:431914 smu1, MGC81475; smu-1 suppressor of mec-8 and unc-52
homolog; K13111 WD40 repeat-containing protein SMU1
Length=513
Score = 55.1 bits (131), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQCLPSVMSIILAPRNVGMDLF 61
D II+ S+DG +K+W+ KT +C +TF +V S+IL P+N + F
Sbjct 360 DGHYIISASSDGTVKIWNMKTTECSNTFK----SLGSTAGTDITVNSVILLPKNP--EHF 413
Query 62 YVCTKSNTISLMNYSGKTINSWS 84
VC +SNT+ +MN G+ + S+S
Sbjct 414 VVCNRSNTVVIMNMQGQIVRSFS 436
Score = 31.6 bits (70), Expect = 0.62, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQCL 43
D + TG+ DGKIK+W ++ CL F H + CL
Sbjct 275 DTEMLATGAQDGKIKVWKIQSGQCLRRFE---RAHSKGVTCL 313
> tpv:TP01_0202 hypothetical protein; K13111 WD40 repeat-containing
protein SMU1
Length=526
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQ--CLPSVMSIILAPRNVGM- 58
D TR+ITGS+DG +K+WD +T +CL +F + + ++ IL G
Sbjct 369 DGTRVITGSSDGFVKVWDTRTCECLKSFAAFIQRENDDRDGPLISKSVNTILNLSTAGQS 428
Query 59 DLFYVCTKSNTISLMNYSG 77
++F VC+KS + L N +G
Sbjct 429 EMFLVCSKSPVLKLFNMNG 447
> bbo:BBOV_IV005340 23.m06217; WD domain, G-beta repeat containing
protein; K13111 WD40 repeat-containing protein SMU1
Length=533
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFTPPVPP--HMQAEQCLPSVMSIILAPRNVGMD 59
D ++ITGS+DG IK+WD++T D L +F P Q P ++ I+A G D
Sbjct 371 DGNKVITGSSDGYIKVWDSRTGDLLKSFLAYTGPGSGTQIPNDSPRAVNCIIALPYTGTD 430
Query 60 -LFYVCTKSNTISLMNYSGKTINSWS 84
L VCT+S ++ + +G ++ ++S
Sbjct 431 ELILVCTRSTSLVIYKLNGISVRNYS 456
> dre:570074 WD40 repeat-containing protein SMU1-like; K13111
WD40 repeat-containing protein SMU1
Length=513
Score = 49.3 bits (116), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTF-TPPVPPHMQAEQCLPSVMSIILAPRNVGMDL 60
D +I+ SADG +K+W KT DC T TP +P E +V +++L P+ +
Sbjct 360 DGQHVISASADGTVKVWTVKTMDCTHTIKTPDIP-----EGTDITVNNVVLVPKTP--EH 412
Query 61 FYVCTKSNTISLMNYSGKTINSW 83
F V ++NT+ + N G+ + S+
Sbjct 413 FVVSNRTNTVVVTNIHGQVMRSF 435
Score = 28.1 bits (61), Expect = 6.7, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 0/22 (0%)
Query 1 PDNTRIITGSADGKIKLWDAKT 22
PD +ITGS DG I++W+ T
Sbjct 224 PDGQYLITGSVDGFIEVWNFTT 245
> pfa:MAL13P1.54 conserved Plasmodium protein, unknown function;
K13111 WD40 repeat-containing protein SMU1
Length=527
Score = 47.4 bits (111), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQCLPSVMSIILAPRNVGMDLF 61
DN++II + GKI +++ KT +C+++F V + PS+ +IIL +N+ D
Sbjct 365 DNSKIICATDQGKIFIYNQKTLECITSFY--VYFNKSENLIFPSLNNIILINKNL-EDHI 421
Query 62 YVCTKSNTISLMNYSGKTINSWS 84
VC+KS +MN GK I +++
Sbjct 422 LVCSKSPYCYIMNMKGKIIKTYT 444
> sce:YCR057C PWP2, UTP1, YCR055C, YCR058C; Conserved 90S pre-ribosomal
component essential for proper endonucleolytic cleavage
of the 35 S rRNA precursor at A0, A1, and A2 sites; contains
eight WD-repeats; PWP2 deletion leads to defects in cell
cycle and bud morphogenesis; K14558 periodic tryptophan
protein 2
Length=923
Score = 43.1 bits (100), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/29 (55%), Positives = 22/29 (75%), Gaps = 0/29 (0%)
Query 1 PDNTRIITGSADGKIKLWDAKTQDCLSTF 29
PD +R++T S DGKIK+WD + CL+TF
Sbjct 355 PDGSRVVTASEDGKIKVWDITSGFCLATF 383
> cel:CC4.3 smu-1; Suppressor of Mec and Unc defects family member
(smu-1); K13111 WD40 repeat-containing protein SMU1
Length=510
Score = 43.1 bits (100), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 9/81 (11%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQCLPSVMSIILAPRNVGMDLF 61
+ II+ S DG I++W K+ +CLSTF + P ++++I P++ +
Sbjct 360 EGNHIISCSTDGSIRVWHGKSGECLSTFR-------VGSEDYP-ILNVIPIPKSDPPQMI 411
Query 62 YVCTKSNTISLMNYSGKTINS 82
VC +SNT+ ++N SG+ + +
Sbjct 412 -VCNRSNTLYVVNISGQVVRT 431
Score = 36.6 bits (83), Expect = 0.018, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 0/28 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTF 29
D+ + TGS DGKIK+W +T DCL F
Sbjct 275 DSEMLATGSIDGKIKVWKVETGDCLRRF 302
> sce:YIL046W MET30, ZRG11; F-box protein containing five copies
of the WD40 motif, controls cell cycle function, sulfur metabolism,
and methionine biosynthesis as part of the ubiquitin
ligase complex; interacts with and regulates Met4p, localizes
within the nucleus; K10259 F-box and WD-40 domain protein
MET30
Length=640
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 0/28 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTF 29
DN RII+GS DG IK+WD ++ C+ TF
Sbjct 561 DNFRIISGSHDGSIKVWDLQSGKCMHTF 588
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 21/28 (75%), Gaps = 0/28 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTF 29
D+ ++ITGS D I++W+ T +C+ST+
Sbjct 351 DDRKLITGSLDKTIRVWNYITGECISTY 378
> xla:734637 hypothetical protein MGC115367; K14558 periodic tryptophan
protein 2
Length=895
Score = 39.3 bits (90), Expect = 0.003, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 0/30 (0%)
Query 1 PDNTRIITGSADGKIKLWDAKTQDCLSTFT 30
PD I+TG DGK+K+WD + C TFT
Sbjct 375 PDGQHIVTGGDDGKVKVWDTSSGFCYVTFT 404
> sce:YMR146C TIF34; Tif34p; K03246 translation initiation factor
3 subunit I
Length=347
Score = 38.9 bits (89), Expect = 0.005, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 0/28 (0%)
Query 7 ITGSADGKIKLWDAKTQDCLSTFTPPVP 34
+TGSAD IKLWD C++T+ PVP
Sbjct 68 VTGSADYSIKLWDVSNGQCVATWKSPVP 95
> dre:563124 strn3, GS2NA, KIAA1333, MGC175239, id:ibd1241, si:busm1-115o7.2,
si:dz115o7.2, si:dz234g15.7, wu:fc02f06; striatin,
calmodulin binding protein 3
Length=700
Score = 37.7 bits (86), Expect = 0.009, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query 5 RIITGSADGKIKLWDAKTQ-DCLSTFTPP----VPPHMQAEQCLPSVMSIILAPRNVGMD 59
R+++ SADG IKLWD + + CLSTF VP + C P+ M +A N G
Sbjct 503 RLLSCSADGTIKLWDPQEKIPCLSTFNSDKDHGVPTSVDFNGCDPAHM---VASYNTGDA 559
Query 60 LFYVCTKSNTISLMNYSGKT 79
+ Y S + + + G++
Sbjct 560 VVYDLETSQPVVVFSAQGES 579
> mmu:50754 Fbxw7, 1110001A17Rik, AGO, Cdc4, Fbw7, Fbwd6, Fbx30,
Fbxo30, Fbxw6, SEL-10; F-box and WD-40 domain protein 7;
K10260 F-box and WD-40 domain protein 7
Length=710
Score = 37.4 bits (85), Expect = 0.012, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query 6 IITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQCL 43
+++G+AD +K+WD KT CL T P H A CL
Sbjct 597 LVSGNADSTVKIWDIKTGQCLQTLQGP-SKHQSAVTCL 633
Score = 33.1 bits (74), Expect = 0.24, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 0/29 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFT 30
D +++GS D I++WD +T +C+ T T
Sbjct 553 DGIHVVSGSLDTSIRVWDVETGNCIHTLT 581
Score = 32.7 bits (73), Expect = 0.32, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 0/28 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTF 29
D R+++G+ D +K+WD +T+ CL T
Sbjct 513 DGRRVVSGAYDFMVKVWDPETETCLHTL 540
Score = 30.4 bits (67), Expect = 1.3, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 18/24 (75%), Gaps = 0/24 (0%)
Query 6 IITGSADGKIKLWDAKTQDCLSTF 29
II+GS D +K+W+A+T +C+ T
Sbjct 437 IISGSTDRTLKVWNAETGECIHTL 460
Score = 30.4 bits (67), Expect = 1.4, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 0/25 (0%)
Query 5 RIITGSADGKIKLWDAKTQDCLSTF 29
RI++GS D +K+W A T CL T
Sbjct 396 RIVSGSDDNTLKVWSAVTGKCLRTL 420
Score = 30.0 bits (66), Expect = 1.9, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query 5 RIITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQCL 43
R+++GS D +++WD +T CL H+ A +C+
Sbjct 476 RVVSGSRDATLRVWDIETGQCLHVLM----GHVAAVRCV 510
Score = 28.5 bits (62), Expect = 5.5, Method: Composition-based stats.
Identities = 11/17 (64%), Positives = 13/17 (76%), Gaps = 0/17 (0%)
Query 6 IITGSADGKIKLWDAKT 22
+IT S DG +KLWD KT
Sbjct 640 VITSSDDGTVKLWDLKT 656
> xla:734230 fbxw7; F-box and WD repeat domain containing 7; K10260
F-box and WD-40 domain protein 7
Length=706
Score = 37.0 bits (84), Expect = 0.017, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query 6 IITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQCL 43
+++G+AD +K+WD KT CL T P H A CL
Sbjct 593 LVSGNADSTVKIWDIKTGQCLQTLQGP-NKHQSAVTCL 629
Score = 33.1 bits (74), Expect = 0.24, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 0/29 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFT 30
D +++GS D I++WD +T +C+ T T
Sbjct 549 DGIHVVSGSLDTSIRVWDVETGNCIHTLT 577
Score = 32.7 bits (73), Expect = 0.32, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 0/28 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTF 29
D R+++G+ D +K+WD +T+ CL T
Sbjct 509 DGRRVVSGAYDFMVKVWDPETETCLHTL 536
Score = 30.4 bits (67), Expect = 1.3, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 18/24 (75%), Gaps = 0/24 (0%)
Query 6 IITGSADGKIKLWDAKTQDCLSTF 29
II+GS D +K+W+A+T +C+ T
Sbjct 433 IISGSTDRTLKVWNAETGECIHTL 456
Score = 30.4 bits (67), Expect = 1.4, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 0/25 (0%)
Query 5 RIITGSADGKIKLWDAKTQDCLSTF 29
RI++GS D +K+W A T CL T
Sbjct 392 RIVSGSDDNTLKVWSAVTGKCLRTL 416
Score = 30.0 bits (66), Expect = 1.9, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query 5 RIITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQCL 43
R+++GS D +++WD +T CL H+ A +C+
Sbjct 472 RVVSGSRDATLRVWDIETGQCLHVLM----GHVAAVRCV 506
> dre:393827 wdr61, MGC77675, zgc:77675; WD repeat domain 61;
K12602 WD repeat-containing protein 61
Length=305
Score = 36.6 bits (83), Expect = 0.019, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 0/29 (0%)
Query 1 PDNTRIITGSADGKIKLWDAKTQDCLSTF 29
PD+T ++ S+D IK+WD ++ C++TF
Sbjct 242 PDDTHFVSSSSDKSIKVWDTSSRSCVNTF 270
> hsa:5822 PWP2, EHOC-17, PWP2H; PWP2 periodic tryptophan protein
homolog (yeast); K14558 periodic tryptophan protein 2
Length=919
Score = 36.6 bits (83), Expect = 0.019, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 0/30 (0%)
Query 1 PDNTRIITGSADGKIKLWDAKTQDCLSTFT 30
PD I+TG DGK+K+W+ + C TFT
Sbjct 383 PDGQYIVTGGDDGKVKVWNTLSGFCFVTFT 412
> xla:100049143 atg16l1; ATG16 autophagy related 16-like 1
Length=622
Score = 36.6 bits (83), Expect = 0.019, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 0/27 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLST 28
DN RI++GS D +KLWD +++ C+ T
Sbjct 434 DNARIVSGSHDRTLKLWDLRSKVCIKT 460
> hsa:55294 FBXW7, AGO, CDC4, DKFZp686F23254, FBW6, FBW7, FBX30,
FBXO30, FBXW6, FLJ16457, SEL-10, SEL10; F-box and WD repeat
domain containing 7; K10260 F-box and WD-40 domain protein
7
Length=589
Score = 36.6 bits (83), Expect = 0.020, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query 6 IITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQCL 43
+++G+AD +K+WD KT CL T P H A CL
Sbjct 476 LVSGNADSTVKIWDIKTGQCLQTLQGP-NKHQSAVTCL 512
Score = 32.7 bits (73), Expect = 0.26, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 0/29 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFT 30
D +++GS D I++WD +T +C+ T T
Sbjct 432 DGIHVVSGSLDTSIRVWDVETGNCIHTLT 460
Score = 32.3 bits (72), Expect = 0.36, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 0/28 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTF 29
D R+++G+ D +K+WD +T+ CL T
Sbjct 392 DGRRVVSGAYDFMVKVWDPETETCLHTL 419
Score = 30.4 bits (67), Expect = 1.5, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 18/24 (75%), Gaps = 0/24 (0%)
Query 6 IITGSADGKIKLWDAKTQDCLSTF 29
II+GS D +K+W+A+T +C+ T
Sbjct 316 IISGSTDRTLKVWNAETGECIHTL 339
Score = 30.4 bits (67), Expect = 1.5, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 0/25 (0%)
Query 5 RIITGSADGKIKLWDAKTQDCLSTF 29
RI++GS D +K+W A T CL T
Sbjct 275 RIVSGSDDNTLKVWSAVTGKCLRTL 299
Score = 29.6 bits (65), Expect = 2.2, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query 5 RIITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQCL 43
R+++GS D +++WD +T CL H+ A +C+
Sbjct 355 RVVSGSRDATLRVWDIETGQCLHVLM----GHVAAVRCV 389
Score = 28.5 bits (62), Expect = 6.0, Method: Composition-based stats.
Identities = 11/17 (64%), Positives = 13/17 (76%), Gaps = 0/17 (0%)
Query 6 IITGSADGKIKLWDAKT 22
+IT S DG +KLWD KT
Sbjct 519 VITSSDDGTVKLWDLKT 535
> ath:AT2G46280 TRIP-1; TRIP-1 (TGF-BETA RECEPTOR INTERACTING
PROTEIN 1); nucleotide binding / protein binding
Length=328
Score = 36.6 bits (83), Expect = 0.021, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 0/33 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFTPPVP 34
D++R+ITGSAD KLWD K+ L TF P
Sbjct 63 DSSRLITGSADQTAKLWDVKSGKELFTFKFNAP 95
> mmu:77040 Atg16l1, 1500009K01Rik, Apg16l, Atg16l, WDR30; autophagy-related
16-like 1 (yeast)
Length=623
Score = 36.6 bits (83), Expect = 0.022, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 0/27 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLST 28
DN RI++GS D +KLWD +++ C+ T
Sbjct 435 DNARIVSGSHDRTLKLWDLRSKVCIKT 461
> hsa:55054 ATG16L1, APG16L, ATG16A, ATG16L, FLJ00045, FLJ10035,
FLJ10828, FLJ22677, IBD10, WDR30; ATG16 autophagy related
16-like 1 (S. cerevisiae)
Length=523
Score = 36.6 bits (83), Expect = 0.022, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 0/27 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLST 28
DN RI++GS D +KLWD +++ C+ T
Sbjct 335 DNARIVSGSHDRTLKLWDLRSKVCIKT 361
> dre:564991 fbxw7, si:ch211-208n2.1; F-box and WD repeat domain
containing 7; K10260 F-box and WD-40 domain protein 7
Length=605
Score = 36.2 bits (82), Expect = 0.026, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query 6 IITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQCL 43
+++G+AD +K+WD KT CL T P H A CL
Sbjct 492 LVSGNADSTVKIWDIKTGQCLQTLQGP-HKHQSAVTCL 528
Score = 32.7 bits (73), Expect = 0.31, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 0/29 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFT 30
D +++GS D I++WD +T +C+ T T
Sbjct 448 DGIHVVSGSLDTSIRVWDVETGNCIHTLT 476
Score = 32.3 bits (72), Expect = 0.42, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 0/28 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTF 29
D R+++G+ D +K+WD +T+ CL T
Sbjct 408 DGRRVVSGAYDFMVKVWDPETETCLHTL 435
Score = 30.0 bits (66), Expect = 1.7, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 18/24 (75%), Gaps = 0/24 (0%)
Query 6 IITGSADGKIKLWDAKTQDCLSTF 29
II+GS D +K+W+A+T +C+ T
Sbjct 332 IISGSTDRTLKVWNAETGECIHTL 355
Score = 30.0 bits (66), Expect = 1.8, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 0/25 (0%)
Query 5 RIITGSADGKIKLWDAKTQDCLSTF 29
RI++GS D +K+W A T CL T
Sbjct 291 RIVSGSDDNTLKVWSAVTGKCLRTL 315
Score = 29.6 bits (65), Expect = 2.6, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query 5 RIITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQCL 43
R+++GS D +++WD +T CL H+ A +C+
Sbjct 371 RVVSGSRDATLRVWDIETGQCLHVLM----GHVAAVRCV 405
> ath:AT2G46290 eukaryotic translation initiation factor 3 subunit
2, putative / eIF-3 beta, putative / eIF3i, putative; K03246
translation initiation factor 3 subunit I
Length=355
Score = 36.2 bits (82), Expect = 0.027, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 0/33 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFTPPVP 34
D++R+ITGSAD KLWD K+ L TF P
Sbjct 90 DSSRLITGSADQTAKLWDVKSGKELFTFKFGAP 122
Score = 34.3 bits (77), Expect = 0.10, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 0/33 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFTPPVP 34
D++ +TGS D KLWD +T + T+T VP
Sbjct 231 DDSHFLTGSHDKTAKLWDMRTLTLIKTYTTVVP 263
Score = 28.9 bits (63), Expect = 4.0, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 0/26 (0%)
Query 1 PDNTRIITGSADGKIKLWDAKTQDCL 26
P N I++G D I++WDA+T L
Sbjct 185 PLNQTIVSGGEDAAIRIWDAETGKLL 210
> mmu:67337 Cstf1, 1700057K18Rik, AI788832; cleavage stimulation
factor, 3' pre-RNA, subunit 1; K14406 cleavage stimulation
factor subunit 1
Length=431
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query 1 PDNTRIITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQC 42
P +TGS DG IKLWD + C++TF H AE C
Sbjct 272 PSANMYVTGSKDGCIKLWDGVSNRCITTFE---KAHDGAEVC 310
> cel:F55F8.3 hypothetical protein; K14558 periodic tryptophan
protein 2
Length=910
Score = 35.8 bits (81), Expect = 0.033, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 0/29 (0%)
Query 1 PDNTRIITGSADGKIKLWDAKTQDCLSTF 29
PD + + TG+ DGK+K+W++++ C TF
Sbjct 370 PDGSLMATGAEDGKVKIWNSRSSFCTVTF 398
> cel:K10B2.1 lin-23; abnormal cell LINeage family member (lin-23);
K03362 F-box and WD-40 domain protein 1/11
Length=665
Score = 35.4 bits (80), Expect = 0.042, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 0/28 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTF 29
DN II+GS+D +++WD +T +C+ T
Sbjct 271 DNRVIISGSSDATVRVWDVETGECIKTL 298
Score = 32.0 bits (71), Expect = 0.47, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 8/46 (17%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQCLPSVM 47
D RI++G+ DGKIK+WD Q L P + +E CL S++
Sbjct 434 DEKRIVSGAYDGKIKVWD--LQAALD------PRALSSEICLCSLV 471
Score = 28.5 bits (62), Expect = 5.2, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 0/24 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDC 25
D+ +I++G D IK+WD K C
Sbjct 231 DDDKIVSGLRDNTIKIWDRKDYSC 254
> hsa:1477 CSTF1, CstF-50, CstFp50; cleavage stimulation factor,
3' pre-RNA, subunit 1, 50kDa; K14406 cleavage stimulation
factor subunit 1
Length=431
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query 7 ITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQC 42
+TGS DG IKLWD + C++TF H AE C
Sbjct 278 VTGSKDGCIKLWDGVSNRCITTFE---KAHDGAEVC 310
> ath:AT4G02730 transducin family protein / WD-40 repeat family
protein
Length=333
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 0/59 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFTPPVPPHMQAEQCLPSVMSIILAPRNVGMDL 60
D + I++ S DG K+WDAK CL T P + + P+ I++A + + L
Sbjct 181 DGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKL 239
> mmu:213980 Fbxw10, Fbw10, HREP, SM25H2, SM2SH2; F-box and WD-40
domain protein 10; K10266 F-box and WD-40 domain protein
10
Length=1020
Score = 35.4 bits (80), Expect = 0.048, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 0/30 (0%)
Query 5 RIITGSADGKIKLWDAKTQDCLSTFTPPVP 34
R+++G+ DG++K WD +T CL TF P
Sbjct 512 RLVSGAKDGQVKEWDIETGKCLKTFKHKDP 541
> dre:266990 pwp2h, cb471, zgc:56063; PWP2 periodic tryptophan
protein homolog (yeast); K14558 periodic tryptophan protein
2
Length=937
Score = 34.7 bits (78), Expect = 0.077, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 0/30 (0%)
Query 1 PDNTRIITGSADGKIKLWDAKTQDCLSTFT 30
PD + TG DGK+K+W+ + C TFT
Sbjct 395 PDGQYLATGGDDGKVKVWNTNSGLCFVTFT 424
> dre:394014 wdr1, MGC55793, wu:fa66e09, zgc:55793, zgc:77547;
WD repeat domain 1
Length=606
Score = 34.7 bits (78), Expect = 0.081, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 0/30 (0%)
Query 1 PDNTRIITGSADGKIKLWDAKTQDCLSTFT 30
PD+T++I+ S D +KLWD + +STF+
Sbjct 244 PDSTQLISASGDRTVKLWDVGSGTSVSTFS 273
Score = 30.4 bits (67), Expect = 1.4, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 0/29 (0%)
Query 1 PDNTRIITGSADGKIKLWDAKTQDCLSTF 29
PD +R + ADG+I L+D KT + LS+
Sbjct 199 PDGSRYASAGADGQIFLYDGKTGEKLSSL 227
> mmu:216156 Wdr18, 2310012I10Rik, AU044733, AW122032, MGC106215;
WD repeat domain 18
Length=431
Score = 34.7 bits (78), Expect = 0.082, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 10/55 (18%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFT--PPV--------PPHMQAEQCLPSV 46
D + +++GS D ++LWD K++ CL T T PV PP M + PS+
Sbjct 280 DGSVLLSGSHDESVRLWDVKSKQCLRTVTLKGPVTNAAIILAPPSMLNPEFRPSL 334
> mmu:319555 Nwd1, A230063L24Rik; NACHT and WD repeat domain containing
1
Length=1521
Score = 34.3 bits (77), Expect = 0.089, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 0/31 (0%)
Query 1 PDNTRIITGSADGKIKLWDAKTQDCLSTFTP 31
P+N IITGS D I++WD K+ L + TP
Sbjct 1138 PENNLIITGSRDALIQVWDLKSTKKLQSPTP 1168
> cpv:cgd2_2910 hypothetical protein ; K14558 periodic tryptophan
protein 2
Length=1003
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 0/32 (0%)
Query 4 TRIITGSADGKIKLWDAKTQDCLSTFTPPVPP 35
T I TG DGK+KLWD + +TF+ + P
Sbjct 410 TIIATGGVDGKVKLWDISSGYNFATFSDHIAP 441
> mmu:110816 Pwp2, 6530411D08Rik, MGC117973, Pwp2h, wdp103; PWP2
periodic tryptophan protein homolog (yeast); K14558 periodic
tryptophan protein 2
Length=919
Score = 34.3 bits (77), Expect = 0.096, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 0/30 (0%)
Query 1 PDNTRIITGSADGKIKLWDAKTQDCLSTFT 30
PD I+TG DGK+K+W+ + C T T
Sbjct 383 PDGQYIVTGGDDGKVKVWNTLSGFCFVTLT 412
> ath:AT5G16750 TOZ; TOZ (TORMOZEMBRYO DEFECTIVE); nucleotide
binding; K14555 U3 small nucleolar RNA-associated protein 13
Length=876
Score = 34.3 bits (77), Expect = 0.10, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 20/28 (71%), Gaps = 0/28 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTF 29
D T+ ++ ADG +KLW+ T +C++T+
Sbjct 594 DGTQFVSCGADGLLKLWNVNTSECIATY 621
Score = 31.6 bits (70), Expect = 0.69, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 0/28 (0%)
Query 3 NTRIITGSADGKIKLWDAKTQDCLSTFT 30
N I+TGS D ++LW+A ++ C+ T
Sbjct 416 NVLIVTGSKDKTVRLWNATSKSCIGVGT 443
> dre:406825 fbxw11b, btrc2, fbxw11a, wu:fa12e12, wu:fb11f03,
zgc:63728; F-box and WD-40 domain protein 11b; K03362 F-box
and WD-40 domain protein 1/11
Length=527
Score = 34.3 bits (77), Expect = 0.11, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 0/29 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFT 30
D+ +II+G D IK+WD +T +CL T
Sbjct 234 DDEKIISGLRDNSIKIWDKQTLECLKILT 262
Score = 33.5 bits (75), Expect = 0.16, Method: Composition-based stats.
Identities = 12/18 (66%), Positives = 16/18 (88%), Gaps = 0/18 (0%)
Query 2 DNTRIITGSADGKIKLWD 19
DN RI++G+ DGKIK+WD
Sbjct 437 DNKRIVSGAYDGKIKVWD 454
Score = 28.9 bits (63), Expect = 3.7, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 0/28 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTF 29
D I+TGS+D +++WD + + L+T
Sbjct 274 DERVIVTGSSDSTVRVWDVNSGEVLNTL 301
> cel:Y74C10AR.1 eif-3.I; Eukaryotic Initiation Factor family
member (eif-3.I); K03246 translation initiation factor 3 subunit
I
Length=327
Score = 33.9 bits (76), Expect = 0.12, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 0/33 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFTPPVP 34
D T+ +T S D +K+WDA+ +CL T P
Sbjct 63 DTTKCVTASGDLTVKIWDAELGNCLYTINHQTP 95
> tgo:TGME49_043740 flagellar WD-repeat protein PF20, putative
(EC:2.7.11.7)
Length=610
Score = 33.9 bits (76), Expect = 0.12, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 0/35 (0%)
Query 1 PDNTRIITGSADGKIKLWDAKTQDCLSTFTPPVPP 35
P + ++T S DG +KLW ++C+ TFT P
Sbjct 382 PYASVLVTASGDGTVKLWSIAEENCVHTFTDHSKP 416
> sce:YGL137W SEC27; Essential beta'-coat protein of the COPI
coatomer, involved in ER-to-Golgi and Golgi-to-ER transport;
contains WD40 domains that mediate cargo selective interactions;
45% sequence identity to mammalian beta'-COP
Length=889
Score = 33.9 bits (76), Expect = 0.12, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 0/29 (0%)
Query 1 PDNTRIITGSADGKIKLWDAKTQDCLSTF 29
PD +IT S D IK+WD +T+ C++T
Sbjct 196 PDKPYMITASDDLTIKIWDYQTKSCVATL 224
> dre:334373 fbxw11a, btrc2, fbxw11, fbxw11b, fbxw1b, wu:fd14d12,
wu:fi43f07; F-box and WD-40 domain protein 11a; K03362 F-box
and WD-40 domain protein 1/11
Length=527
Score = 33.9 bits (76), Expect = 0.13, Method: Composition-based stats.
Identities = 12/18 (66%), Positives = 16/18 (88%), Gaps = 0/18 (0%)
Query 2 DNTRIITGSADGKIKLWD 19
DN RI++G+ DGKIK+WD
Sbjct 437 DNKRIVSGAYDGKIKVWD 454
Score = 33.1 bits (74), Expect = 0.20, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 0/29 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTFT 30
D+ +II+G D IK+WD ++ +CL T
Sbjct 234 DDDKIISGLRDNSIKIWDKQSLECLKVLT 262
Score = 29.3 bits (64), Expect = 3.2, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 0/28 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTF 29
D I+TGS+D +++WD + + L+T
Sbjct 274 DERVIVTGSSDSTVRVWDVSSGEVLNTL 301
> xla:394362 btrc, MGC83554, beta-TrCP, betaTrCP, btrc-a, btrcp,
btrcp1, fbw1a, fbxw1, fbxw1a, fwd1; beta-transducin repeat
containing; K03362 F-box and WD-40 domain protein 1/11
Length=518
Score = 33.9 bits (76), Expect = 0.14, Method: Composition-based stats.
Identities = 12/18 (66%), Positives = 16/18 (88%), Gaps = 0/18 (0%)
Query 2 DNTRIITGSADGKIKLWD 19
DN RI++G+ DGKIK+WD
Sbjct 444 DNKRIVSGAYDGKIKVWD 461
Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 0/28 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDCLSTF 29
D IITGS+D +++WD T + L+T
Sbjct 281 DERVIITGSSDSTVRVWDVNTGEMLNTL 308
Score = 29.6 bits (65), Expect = 2.4, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 0/24 (0%)
Query 2 DNTRIITGSADGKIKLWDAKTQDC 25
D+ +I++G D IK+WD T +C
Sbjct 241 DDQKIVSGLRDNTIKIWDKNTLEC 264
> xla:380144 gnb1, MGC68852; guanine nucleotide binding protein
(G protein), beta polypeptide 1; K07825 guanine nucleotide
binding protein (G protein), beta 3
Length=340
Score = 33.5 bits (75), Expect = 0.15, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 0/30 (0%)
Query 1 PDNTRIITGSADGKIKLWDAKTQDCLSTFT 30
PD I+G+ D KLWD + +C TFT
Sbjct 194 PDFNLFISGACDASAKLWDVRQGECRQTFT 223
> xla:380378 gnb3, MGC130764, MGC68913; guanine nucleotide binding
protein (G protein), beta polypeptide 3; K07825 guanine
nucleotide binding protein (G protein), beta 3
Length=340
Score = 33.5 bits (75), Expect = 0.15, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 0/30 (0%)
Query 1 PDNTRIITGSADGKIKLWDAKTQDCLSTFT 30
PD I+G+ D KLWD + +C TFT
Sbjct 194 PDFNLFISGACDASAKLWDVRQGECRQTFT 223
> dre:541370 gnb2, im:7138539, zgc:113357; guanine nucleotide
binding protein (G protein), beta polypeptide 2; K04537 guanine
nucleotide binding protein (G protein), beta 2
Length=340
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 0/30 (0%)
Query 1 PDNTRIITGSADGKIKLWDAKTQDCLSTFT 30
PD+ I+G+ D IKLWD + C TFT
Sbjct 194 PDSRTFISGACDASIKLWDIRDSMCRQTFT 223
> sce:YLR129W DIP2, UTP12; Dip2p; K14556 U3 small nucleolar RNA-associated
protein 12
Length=943
Score = 33.5 bits (75), Expect = 0.17, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 0/23 (0%)
Query 6 IITGSADGKIKLWDAKTQDCLST 28
+I+ S DG IKLWD KT C+ T
Sbjct 177 LISTSKDGMIKLWDLKTHQCIET 199
Lambda K H
0.318 0.131 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2040069136
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40