bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_4699_orf2
Length=216
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_069840 26S proteasome non-ATPase subunit, putative ... 367 2e-101
tpv:TP02_0201 proteasome regulatory subunit; K03030 26S protea... 342 6e-94
bbo:BBOV_II007480 18.m06620; 26S proteasome regulatory subunit... 337 2e-92
pfa:MAL13P1.343 proteasome regulatory subunit, putative; K0303... 337 2e-92
ath:AT5G23540 26S proteasome regulatory subunit, putative; K03... 322 7e-88
cpv:cgd6_3270 26S proteasome-associated Mov34/MPN/PAD-1 family... 319 6e-87
mmu:59029 Psmd14, 2610312C03Rik, 3200001M20Rik, AA986732, Pad1... 309 4e-84
hsa:10213 PSMD14, PAD1, POH1, RPN11; proteasome (prosome, macr... 309 4e-84
xla:380423 psmd14, MGC53911; 26S proteasome-associated pad1 ho... 308 1e-83
xla:444285 psmd14, MGC80929; proteasome (prosome, macropain) 2... 308 1e-83
dre:799058 psmd14, MGC162272, zgc:162272; proteasome (prosome,... 307 2e-83
cel:K07D4.3 rpn-11; proteasome Regulatory Particle, Non-ATPase... 295 7e-80
sce:YFR004W RPN11, MPR1; Metalloprotease subunit of the 19S re... 273 4e-73
cel:F37A4.5 hypothetical protein; K03030 26S proteasome regula... 249 5e-66
cel:B0547.1 csn-5; COP-9 SigNalosome subunit family member (cs... 99.0 1e-20
ath:AT1G71230 CSN5B; CSN5B (COP9-SIGNALOSOME 5B); protein bind... 98.2 2e-20
mmu:26754 Cops5, AI303502, CSN5, Jab1, Mov34, Sgn5; COP9 (cons... 96.7 5e-20
dre:393698 cops5, MGC73130, zgc:73130; COP9 constitutive photo... 96.7 5e-20
hsa:10987 COPS5, CSN5, JAB1, MGC3149, MOV-34, SGN5; COP9 const... 96.7 6e-20
xla:444720 cops5, MGC84682; COP9 constitutive photomorphogenic... 96.7 6e-20
ath:AT1G22920 CSN5A; CSN5A (COP9 SIGNALOSOME 5A); K09613 COP9 ... 96.3 8e-20
sce:YDL216C RRI1, CSN5, JAB1; Catalytic subunit of the COP9 si... 79.0 1e-14
tgo:TGME49_108590 Mov34/MPN/PAD-1 domain-containing protein ; ... 74.3 3e-13
mmu:210766 Brcc3, C6.1A, MGC29148; BRCA1/BRCA2-containing comp... 63.2 6e-10
dre:100333845 BRCA1/BRCA2-containing complex subunit 3-like; K... 62.8 8e-10
hsa:79184 BRCC3, BRCC36, C6.1A, CXorf53; BRCA1/BRCA2-containin... 60.8 3e-09
xla:447688 brcc3, MGC99130, brcc36; BRCA1/BRCA2-containing com... 60.1 5e-09
mmu:368203 Gm5136, C6.1AL, EG368203, MGC155743, MGC155745; pre... 57.4 3e-08
xla:496043 eif3h, eif3s3; eukaryotic translation initiation fa... 56.2 8e-08
dre:445306 eif3ha, eIF3h-A, eif3h, eif3s3, fj02c04, wu:fj02c04... 55.1 2e-07
dre:567151 eif3hb, MGC123049, zgc:123049; eukaryotic translati... 53.5 6e-07
mmu:68135 Eif3h, 1110008A16Rik, 40kD, 9430017H16Rik, EIF3-P40,... 53.1 7e-07
hsa:8667 EIF3H, EIF3S3, MGC102958, eIF3-gamma, eIF3-p40; eukar... 53.1 7e-07
xla:779416 mysm1, 2A-DUB, MGC154322; myb-like, SWIRM and MPN d... 48.1 2e-05
hsa:114803 MYSM1, 2A-DUB, 2ADUB, DKFZp779J1554, DKFZp779J1721,... 47.8 3e-05
mmu:320713 Mysm1, C130067A03Rik, C530050H10Rik; myb-like, SWIR... 47.4 4e-05
ath:AT1G10600 hypothetical protein 47.0 5e-05
dre:100331111 histone H2A deubiquitinase MYSM1-like 46.2 9e-05
dre:561225 mysm1, im:7153144, si:ch211-59d15.8; Myb-like, SWIR... 45.8 1e-04
ath:AT1G80210 hypothetical protein; K11864 BRCA1/BRCA2-contain... 45.4 2e-04
ath:AT3G06820 mov34 family protein; K11864 BRCA1/BRCA2-contain... 45.1 2e-04
ath:AT1G48790 mov34 family protein; K11866 STAM-binding protei... 43.9 4e-04
xla:444711 stambpl1, MGC84444; STAM binding protein-like 1 (EC... 42.4 0.001
xla:414627 hypothetical protein MGC81376; K11867 AMSH-like pro... 42.4 0.001
hsa:57559 STAMBPL1, ALMalpha, AMSH-FP, AMSH-LP, FLJ31524, KIAA... 42.0 0.001
mmu:76630 Stambpl1, 1700095N21Rik, 8230401J17Rik, ALMalpha, AM... 42.0 0.002
ath:AT1G10840 TIF3H1; TIF3H1; translation initiation factor; K... 41.2 0.002
tgo:TGME49_069250 26S proteasome regulatory subunit, putative ... 40.0 0.006
sce:YOR261C RPN8; Essential, non-ATPase regulatory subunit of ... 38.9 0.012
ath:AT2G39990 EIF2; EIF2; translation initiation factor; K0324... 38.5 0.016
> tgo:TGME49_069840 26S proteasome non-ATPase subunit, putative
; K03030 26S proteasome regulatory subunit N11
Length=314
Score = 367 bits (942), Expect = 2e-101, Method: Compositional matrix adjust.
Identities = 173/214 (80%), Positives = 190/214 (88%), Gaps = 0/214 (0%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVGW 62
EVMGLMLGEFIDD+TVRVVDVFSMPQSGNSVS+EAVD VYQTEMLEQLKRTGRP+MVVGW
Sbjct 57 EVMGLMLGEFIDDYTVRVVDVFSMPQSGNSVSVEAVDPVYQTEMLEQLKRTGRPEMVVGW 116
Query 63 YHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRLINPHLVMLG 122
YHSHPGFGCWFSGTDVNTQQSFEQLN RAVGVVVDPIQSVKGKVV+DCFRLINPHL+MLG
Sbjct 117 YHSHPGFGCWFSGTDVNTQQSFEQLNPRAVGVVVDPIQSVKGKVVIDCFRLINPHLLMLG 176
Query 123 QEPRQTTSNIGHLSRPTITALVHGLNRNYYSIAINCRKGELEHQMLANLHTNKWSDALKL 182
QE RQTTSNIGHL RPTI+ALVHGLNRNYY+I IN RK ELE+QML NLH NKW+DALKL
Sbjct 177 QELRQTTSNIGHLQRPTISALVHGLNRNYYAIVINYRKNELENQMLLNLHRNKWNDALKL 236
Query 183 KNYQEHQEEREESIAALKELSCRYTSMMKKKKKK 216
K + E E ++KELS +Y M++++ KK
Sbjct 237 KPFDEMAAESAACTKSMKELSEQYNKMVQEEIKK 270
> tpv:TP02_0201 proteasome regulatory subunit; K03030 26S proteasome
regulatory subunit N11
Length=312
Score = 342 bits (877), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 154/211 (72%), Positives = 183/211 (86%), Gaps = 0/211 (0%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVGW 62
EVMGLMLG+FIDD+T+RVVDVFSMPQSGNSVS+EAVD VYQTEM +QLKRTGRP++VVGW
Sbjct 55 EVMGLMLGDFIDDYTIRVVDVFSMPQSGNSVSVEAVDPVYQTEMKDQLKRTGRPEVVVGW 114
Query 63 YHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRLINPHLVMLG 122
YHSHPGFGCWFSGTDVNTQQSFEQLN RAVGVV+DPIQSVKGKVV+DCFRLI+PHL+MLG
Sbjct 115 YHSHPGFGCWFSGTDVNTQQSFEQLNPRAVGVVIDPIQSVKGKVVIDCFRLISPHLIMLG 174
Query 123 QEPRQTTSNIGHLSRPTITALVHGLNRNYYSIAINCRKGELEHQMLANLHTNKWSDALKL 182
EPRQTTSNIGHL +PTI ALVHGLNRNYYSI INC+K LE QML N + N+W+ L L
Sbjct 175 HEPRQTTSNIGHLQKPTIIALVHGLNRNYYSIVINCKKTPLESQMLLNFNKNRWTKDLHL 234
Query 183 KNYQEHQEEREESIAALKELSCRYTSMMKKK 213
+++ E Q+E + + +++L +Y +K++
Sbjct 235 QDFVERQKENNDLVREIRDLCEKYNQSIKQE 265
> bbo:BBOV_II007480 18.m06620; 26S proteasome regulatory subunit;
K03030 26S proteasome regulatory subunit N11
Length=312
Score = 337 bits (864), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 151/211 (71%), Positives = 182/211 (86%), Gaps = 0/211 (0%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVGW 62
EVMGLMLGEFIDD+T+ VVDVFSMPQSGNSVS+EAVD VYQTEM ++LK TGRP++VVGW
Sbjct 55 EVMGLMLGEFIDDYTIVVVDVFSMPQSGNSVSVEAVDPVYQTEMKDKLKLTGRPEVVVGW 114
Query 63 YHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRLINPHLVMLG 122
YHSHPGFGCWFSGTD+NTQQSFEQLN RAVG+V+DPIQSVKGKVV+DCFRLI PHL+MLG
Sbjct 115 YHSHPGFGCWFSGTDINTQQSFEQLNPRAVGIVIDPIQSVKGKVVIDCFRLITPHLIMLG 174
Query 123 QEPRQTTSNIGHLSRPTITALVHGLNRNYYSIAINCRKGELEHQMLANLHTNKWSDALKL 182
QEPRQTTSNIGHLS+PT+ A+VHGLNRNYY+I IN RK LE QML N H NKW+D L++
Sbjct 175 QEPRQTTSNIGHLSKPTMIAVVHGLNRNYYNIVINYRKSVLETQMLMNYHRNKWTDNLQV 234
Query 183 KNYQEHQEEREESIAALKELSCRYTSMMKKK 213
+++ + E E++ +K+L +Y +K++
Sbjct 235 RDFVTRRRENRETVGNIKDLIDKYNDSIKQE 265
> pfa:MAL13P1.343 proteasome regulatory subunit, putative; K03030
26S proteasome regulatory subunit N11
Length=311
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 149/214 (69%), Positives = 184/214 (85%), Gaps = 0/214 (0%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVGW 62
EVMGLMLGE +D++T+R+VDVF+MPQSGNSVS+EAVD VYQT MLE+LK+TGR +MVVGW
Sbjct 54 EVMGLMLGEIVDEYTIRIVDVFAMPQSGNSVSVEAVDPVYQTNMLEELKKTGRHEMVVGW 113
Query 63 YHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRLINPHLVMLG 122
YHSHPGFGCW SGTDVNTQ+SFEQLN R +GVVVDPIQSVKGKVV+DCFRLINPH++MLG
Sbjct 114 YHSHPGFGCWLSGTDVNTQKSFEQLNPRTIGVVVDPIQSVKGKVVIDCFRLINPHILMLG 173
Query 123 QEPRQTTSNIGHLSRPTITALVHGLNRNYYSIAINCRKGELEHQMLANLHTNKWSDALKL 182
QEPRQTTSNIG+L++PT+TALVHGLNRNYYSI IN RK ELE ML NLH + W++ LKL
Sbjct 174 QEPRQTTSNIGYLTKPTLTALVHGLNRNYYSIVINYRKNELEKNMLLNLHKDMWTNPLKL 233
Query 183 KNYQEHQEEREESIAALKELSCRYTSMMKKKKKK 216
++ E ++ +E++ +K+L+ Y ++ + KK
Sbjct 234 NDFHEQKKSSDETLEDIKKLTTLYNKNLRNEMKK 267
> ath:AT5G23540 26S proteasome regulatory subunit, putative; K03030
26S proteasome regulatory subunit N11
Length=259
Score = 322 bits (825), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 141/213 (66%), Positives = 176/213 (82%), Gaps = 0/213 (0%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVGW 62
EVMGLMLGEF+D++TVRVVDVF+MPQSG VS+EAVD+V+QT ML+ LK+TGRP+MVVGW
Sbjct 2 EVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGW 61
Query 63 YHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRLINPHLVMLG 122
YHSHPGFGCW SG D+NTQQSFE LN RAV VVVDPIQSVKGKVV+D FR INP +MLG
Sbjct 62 YHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRSINPQTIMLG 121
Query 123 QEPRQTTSNIGHLSRPTITALVHGLNRNYYSIAINCRKGELEHQMLANLHTNKWSDALKL 182
QEPRQTTSN+GHL++P+I AL+HGLNR+YYSIAIN RK ELE +ML NLH KW+D L L
Sbjct 122 QEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTL 181
Query 183 KNYQEHQEEREESIAALKELSCRYTSMMKKKKK 215
+ + H + E+++ + L+ +Y ++++ +
Sbjct 182 RRFDTHSKTNEQTVQEMLSLAAKYNKAVQEEDE 214
> cpv:cgd6_3270 26S proteasome-associated Mov34/MPN/PAD-1 family.
JAB domain. ; K03030 26S proteasome regulatory subunit N11
Length=315
Score = 319 bits (817), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 149/204 (73%), Positives = 169/204 (82%), Gaps = 0/204 (0%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVGW 62
EVMGL+LGEFIDD++VRVVDVFSMPQSGNSVS+EAVD VYQT+MLE LKR GR ++VVGW
Sbjct 58 EVMGLLLGEFIDDYSVRVVDVFSMPQSGNSVSVEAVDPVYQTDMLEMLKRVGRSELVVGW 117
Query 63 YHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRLINPHLVMLG 122
YHSHPGFGCWFSGTDV+TQQSFEQLN RAVG+VVDPIQSVKGKVV+DCFRLI+PH V+ G
Sbjct 118 YHSHPGFGCWFSGTDVSTQQSFEQLNPRAVGIVVDPIQSVKGKVVIDCFRLISPHSVIAG 177
Query 123 QEPRQTTSNIGHLSRPTITALVHGLNRNYYSIAINCRKGELEHQMLANLHTNKWSDALKL 182
QEPRQTTSNIGHL +P+ITALVHGLNRNYYSIAI RK LE +ML NLH WS+ L+
Sbjct 178 QEPRQTTSNIGHLQKPSITALVHGLNRNYYSIAIRYRKNLLEQKMLLNLHKPTWSEPLRC 237
Query 183 KNYQEHQEEREESIAALKELSCRY 206
+ E I + E S +Y
Sbjct 238 DKEENFNERNNSMIKRICETSKQY 261
> mmu:59029 Psmd14, 2610312C03Rik, 3200001M20Rik, AA986732, Pad1,
Poh1, rpm11; proteasome (prosome, macropain) 26S subunit,
non-ATPase, 14 (EC:3.1.2.15); K03030 26S proteasome regulatory
subunit N11
Length=310
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 138/213 (64%), Positives = 173/213 (81%), Gaps = 0/213 (0%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVGW 62
EVMGLMLGEF+DD+TVRV+DVF+MPQSG VS+EAVD V+Q +ML+ LK+TGRP+MVVGW
Sbjct 52 EVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGW 111
Query 63 YHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRLINPHLVMLG 122
YHSHPGFGCW SG D+NTQQSFE L+ RAV VVVDPIQSVKGKVV+D FRLIN ++++LG
Sbjct 112 YHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLG 171
Query 123 QEPRQTTSNIGHLSRPTITALVHGLNRNYYSIAINCRKGELEHQMLANLHTNKWSDALKL 182
EPRQTTSN+GHL++P+I AL+HGLNR+YYSI IN RK ELE +ML NLH W + L L
Sbjct 172 HEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTL 231
Query 183 KNYQEHQEEREESIAALKELSCRYTSMMKKKKK 215
++Y EH + E + + EL+ Y ++++ K
Sbjct 232 QDYSEHCKHNESVVKEMLELAKNYNKAVEEEDK 264
> hsa:10213 PSMD14, PAD1, POH1, RPN11; proteasome (prosome, macropain)
26S subunit, non-ATPase, 14 (EC:3.1.2.15); K03030 26S
proteasome regulatory subunit N11
Length=310
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 138/213 (64%), Positives = 173/213 (81%), Gaps = 0/213 (0%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVGW 62
EVMGLMLGEF+DD+TVRV+DVF+MPQSG VS+EAVD V+Q +ML+ LK+TGRP+MVVGW
Sbjct 52 EVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGW 111
Query 63 YHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRLINPHLVMLG 122
YHSHPGFGCW SG D+NTQQSFE L+ RAV VVVDPIQSVKGKVV+D FRLIN ++++LG
Sbjct 112 YHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLG 171
Query 123 QEPRQTTSNIGHLSRPTITALVHGLNRNYYSIAINCRKGELEHQMLANLHTNKWSDALKL 182
EPRQTTSN+GHL++P+I AL+HGLNR+YYSI IN RK ELE +ML NLH W + L L
Sbjct 172 HEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTL 231
Query 183 KNYQEHQEEREESIAALKELSCRYTSMMKKKKK 215
++Y EH + E + + EL+ Y ++++ K
Sbjct 232 QDYSEHCKHNESVVKEMLELAKNYNKAVEEEDK 264
> xla:380423 psmd14, MGC53911; 26S proteasome-associated pad1
homolog (EC:3.1.2.15); K03030 26S proteasome regulatory subunit
N11
Length=310
Score = 308 bits (789), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 138/213 (64%), Positives = 173/213 (81%), Gaps = 0/213 (0%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVGW 62
EVMGLMLGEF+DD+TVRV+DVF+MPQSG VS+EAVD V+Q +ML+ LK+TGRP+MVVGW
Sbjct 52 EVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGW 111
Query 63 YHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRLINPHLVMLG 122
YHSHPGFGCW SG D+NTQQSFE L+ RAV VVVDPIQSVKGKVV+D FRLIN ++++LG
Sbjct 112 YHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLG 171
Query 123 QEPRQTTSNIGHLSRPTITALVHGLNRNYYSIAINCRKGELEHQMLANLHTNKWSDALKL 182
EPRQTTSN+GHL++P+I AL+HGLNR+YYSI IN RK ELE +ML NLH W + L L
Sbjct 172 HEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTL 231
Query 183 KNYQEHQEEREESIAALKELSCRYTSMMKKKKK 215
++Y EH + E + + EL+ Y ++++ K
Sbjct 232 QDYSEHCKLNETVVKEMLELAKNYNKAVEEEDK 264
> xla:444285 psmd14, MGC80929; proteasome (prosome, macropain)
26S subunit, non-ATPase, 14; K03030 26S proteasome regulatory
subunit N11
Length=310
Score = 308 bits (789), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 138/213 (64%), Positives = 173/213 (81%), Gaps = 0/213 (0%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVGW 62
EVMGLMLGEF+DD+TVRV+DVF+MPQSG VS+EAVD V+Q +ML+ LK+TGRP+MVVGW
Sbjct 52 EVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGW 111
Query 63 YHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRLINPHLVMLG 122
YHSHPGFGCW SG D+NTQQSFE L+ RAV VVVDPIQSVKGKVV+D FRLIN ++++LG
Sbjct 112 YHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLG 171
Query 123 QEPRQTTSNIGHLSRPTITALVHGLNRNYYSIAINCRKGELEHQMLANLHTNKWSDALKL 182
EPRQTTSN+GHL++P+I AL+HGLNR+YYSI IN RK ELE +ML NLH W + L L
Sbjct 172 HEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTL 231
Query 183 KNYQEHQEEREESIAALKELSCRYTSMMKKKKK 215
++Y EH + E + + EL+ Y ++++ K
Sbjct 232 QDYSEHCKLNETVVKEMLELAKNYNKAVEEEDK 264
> dre:799058 psmd14, MGC162272, zgc:162272; proteasome (prosome,
macropain) 26S subunit, non-ATPase, 14 (EC:3.1.2.15); K03030
26S proteasome regulatory subunit N11
Length=310
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 138/213 (64%), Positives = 173/213 (81%), Gaps = 0/213 (0%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVGW 62
EVMGLMLGEF+DD+TVRV+DVF+MPQSG VS+EAVD V+Q +ML+ LK+TGRP+MVVGW
Sbjct 52 EVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGW 111
Query 63 YHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRLINPHLVMLG 122
YHSHPGFGCW SG D+NTQQSFE L+ RAV VVVDPIQSVKGKVV+D FRLIN ++++LG
Sbjct 112 YHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLG 171
Query 123 QEPRQTTSNIGHLSRPTITALVHGLNRNYYSIAINCRKGELEHQMLANLHTNKWSDALKL 182
EPRQTTSN+GHL++P+I AL+HGLNR+YYSI IN RK ELE +ML NLH W + L L
Sbjct 172 HEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTL 231
Query 183 KNYQEHQEEREESIAALKELSCRYTSMMKKKKK 215
++Y EH + E + + EL+ Y ++++ K
Sbjct 232 QDYSEHCKLNETIVKEMLELAKNYNKAVEEEDK 264
> cel:K07D4.3 rpn-11; proteasome Regulatory Particle, Non-ATPase-like
family member (rpn-11); K03030 26S proteasome regulatory
subunit N11
Length=312
Score = 295 bits (755), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 133/212 (62%), Positives = 168/212 (79%), Gaps = 0/212 (0%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVGW 62
EVMGLMLGEF+DD+TV V+DVF+MPQSG VS+EAVD V+Q +ML+ LK+TGRP+MVVGW
Sbjct 54 EVMGLMLGEFVDDYTVNVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGW 113
Query 63 YHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRLINPHLVMLG 122
YHSHPGFGCW SG D+NTQQSFE L+ RAV VVVDPIQSVKGKVV+D FR INP + L
Sbjct 114 YHSHPGFGCWLSGVDINTQQSFEALSDRAVAVVVDPIQSVKGKVVIDAFRTINPQSMALN 173
Query 123 QEPRQTTSNIGHLSRPTITALVHGLNRNYYSIAINCRKGELEHQMLANLHTNKWSDALKL 182
QEPRQTTSN+GHL +P+I AL+HGLNR+YYSI I R +LE +ML NL+ W DA+ +
Sbjct 174 QEPRQTTSNLGHLQKPSIQALIHGLNRHYYSIPIAYRTHDLEQKMLLNLNKLSWMDAVSV 233
Query 183 KNYQEHQEEREESIAALKELSCRYTSMMKKKK 214
+NY + E+ +E + A+ +L+ Y ++ +K
Sbjct 234 ENYSKCGEQNKEHLKAMLKLAKNYKKALEDEK 265
> sce:YFR004W RPN11, MPR1; Metalloprotease subunit of the 19S
regulatory particle of the 26S proteasome lid; couples the deubiquitination
and degradation of proteasome substrates; involved,
independent of catalytic activity, in fission of mitochondria
and peroxisomes; K03030 26S proteasome regulatory
subunit N11
Length=306
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 159/205 (77%), Gaps = 0/205 (0%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVGW 62
EVMGLMLGEF+DD+TV VVDVF+MPQSG VS+EAVD V+Q +M++ LK+TGR QMVVGW
Sbjct 48 EVMGLMLGEFVDDYTVNVVDVFAMPQSGTGVSVEAVDDVFQAKMMDMLKQTGRDQMVVGW 107
Query 63 YHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRLINPHLVMLG 122
YHSHPGFGCW S DVNTQ+SFEQLN+RAV VVVDPIQSVKGKVV+D FRLI+ ++
Sbjct 108 YHSHPGFGCWLSSVDVNTQKSFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLIDTGALINN 167
Query 123 QEPRQTTSNIGHLSRPTITALVHGLNRNYYSIAINCRKGELEHQMLANLHTNKWSDALKL 182
EPRQTTSN G L++ I AL+HGLNR+YYS+ I+ K E +ML NLH +W LK+
Sbjct 168 LEPRQTTSNTGLLNKANIQALIHGLNRHYYSLNIDYHKTAKETKMLMNLHKEQWQSGLKM 227
Query 183 KNYQEHQEEREESIAALKELSCRYT 207
+Y+E +E + ++ +++ +Y+
Sbjct 228 YDYEEKEESNLAATKSMVKIAEQYS 252
> cel:F37A4.5 hypothetical protein; K03030 26S proteasome regulatory
subunit N11
Length=319
Score = 249 bits (636), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 115/219 (52%), Positives = 156/219 (71%), Gaps = 5/219 (2%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVGW 62
EVMGLMLG+F+DD+T+ V DVF+MPQSG SV++E+VD VYQT+ ++ LK GR + VVGW
Sbjct 50 EVMGLMLGDFVDDYTINVTDVFAMPQSGTSVTVESVDPVYQTKHMDLLKLVGRTENVVGW 109
Query 63 YHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRLINPHLVML- 121
YHSHPGFGCW S DVNTQQSFE L+ RAV VVVDPIQSVKGKV++D FR +NP + +
Sbjct 110 YHSHPGFGCWLSSVDVNTQQSFEALHPRAVAVVVDPIQSVKGKVMLDAFRSVNPLNLQIR 169
Query 122 ----GQEPRQTTSNIGHLSRPTITALVHGLNRNYYSIAINCRKGELEHQMLANLHTNKWS 177
EPRQTTSN+GHL++P++ ++VHGL YYS+ + R G E +ML L+ W
Sbjct 170 PLAPTAEPRQTTSNLGHLTKPSLISVVHGLGTKYYSLNVAYRMGSNEQKMLMCLNKKSWY 229
Query 178 DALKLKNYQEHQEEREESIAALKELSCRYTSMMKKKKKK 216
D L + Y E ++++EE ++ +L + + + K+K
Sbjct 230 DQLNMSTYSELEKKQEEKFKSINKLIAVFNKDIDEVKEK 268
> cel:B0547.1 csn-5; COP-9 SigNalosome subunit family member (csn-5);
K09613 COP9 signalosome complex subunit 5 [EC:3.4.-.-]
Length=368
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 97/182 (53%), Gaps = 11/182 (6%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSGNS--VSIEAVDYVYQTEMLEQLKRTGRPQMVV 60
E+MGL+ G ID + ++DVF++P G V+ +A Y Y T E GR + VV
Sbjct 77 EIMGLLQGR-IDANSFIILDVFALPVEGTETRVNAQAQAYEYMTVYSEMCDTEGRKEKVV 135
Query 61 GWYHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVK-GKVVMDCFRLINPHLV 119
GWYHSHPG+GCW SG DV+TQ ++ V +V+DP++++ GKV + FR P
Sbjct 136 GWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVIDPLRTMSAGKVDIGAFRTY-PE-- 192
Query 120 MLGQEPRQTTSNIGHLSRPTITALVHGLN-RNYYSIAINCRKGELEHQMLANLHTNKWSD 178
G P + + S P G++ + YYS+ ++ K +L+ +L +L + W
Sbjct 193 --GYRPPDDVPS-EYQSIPLAKIEDFGVHCKRYYSLDVSFFKSQLDAHILTSLWNSYWIS 249
Query 179 AL 180
L
Sbjct 250 TL 251
> ath:AT1G71230 CSN5B; CSN5B (COP9-SIGNALOSOME 5B); protein binding;
K09613 COP9 signalosome complex subunit 5 [EC:3.4.-.-]
Length=358
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 70/115 (60%), Gaps = 4/115 (3%)
Query 1 TREVMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIEAVD--YVYQTEMLEQLKRTGRPQM 58
T E+MGLM G+ D T+ V+D F++P G + A D Y Y E + K GR +
Sbjct 78 TIEIMGLMQGK-TDGDTIIVMDAFALPVEGTETRVNAQDDAYEYMVEYSQTNKLAGRLEN 136
Query 59 VVGWYHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVK-GKVVMDCFR 112
VVGWYHSHPG+GCW SG DV+TQ+ +Q + VV+DP ++V GKV + FR
Sbjct 137 VVGWYHSHPGYGCWLSGIDVSTQRLNQQHQEPFLAVVIDPTRTVSAGKVEIGAFR 191
> mmu:26754 Cops5, AI303502, CSN5, Jab1, Mov34, Sgn5; COP9 (constitutive
photomorphogenic) homolog, subunit 5 (Arabidopsis
thaliana); K09613 COP9 signalosome complex subunit 5 [EC:3.4.-.-]
Length=334
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSGNS--VSIEAVDYVYQTEMLEQLKRTGRPQMVV 60
EVMGLMLG+ +D T+ ++D F++P G V+ +A Y Y +E K+ GR + +
Sbjct 76 EVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAI 134
Query 61 GWYHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVK-GKVVMDCFRLINPHLV 119
GWYHSHPG+GCW SG DV+TQ +Q V VV+DP +++ GKV + FR
Sbjct 135 GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGY- 193
Query 120 MLGQEPRQTTSNIGHLSRPTITAL-VHGLNRNYYSIAINCRKGELEHQMLANLHTNKWSD 178
+ P + S + I VH + YY++ ++ K L+ ++L L W +
Sbjct 194 ---KPPDEGPSEYQTIPLNKIEDFGVHC--KQYYALEVSYFKSSLDRKLLELLWNKYWVN 248
Query 179 AL 180
L
Sbjct 249 TL 250
> dre:393698 cops5, MGC73130, zgc:73130; COP9 constitutive photomorphogenic
homolog subunit 5; K09613 COP9 signalosome complex
subunit 5 [EC:3.4.-.-]
Length=334
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSGNS--VSIEAVDYVYQTEMLEQLKRTGRPQMVV 60
EVMGLMLG+ +D T+ ++D F++P G V+ +A Y Y +E K+ GR + +
Sbjct 74 EVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAI 132
Query 61 GWYHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVK-GKVVMDCFRLINPHLV 119
GWYHSHPG+GCW SG DV+TQ +Q V VV+DP +++ GKV + FR
Sbjct 133 GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGY- 191
Query 120 MLGQEPRQTTSNIGHLSRPTITAL-VHGLNRNYYSIAINCRKGELEHQMLANLHTNKWSD 178
+ P + S + I VH + YY++ ++ K L+ ++L L W +
Sbjct 192 ---KPPDEGPSEYQTIPLNKIEDFGVHC--KQYYALEVSYFKSSLDRKLLELLWNKYWVN 246
Query 179 AL 180
L
Sbjct 247 TL 248
> hsa:10987 COPS5, CSN5, JAB1, MGC3149, MOV-34, SGN5; COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis);
K09613 COP9 signalosome complex subunit 5 [EC:3.4.-.-]
Length=334
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSGNS--VSIEAVDYVYQTEMLEQLKRTGRPQMVV 60
EVMGLMLG+ +D T+ ++D F++P G V+ +A Y Y +E K+ GR + +
Sbjct 76 EVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAI 134
Query 61 GWYHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVK-GKVVMDCFRLINPHLV 119
GWYHSHPG+GCW SG DV+TQ +Q V VV+DP +++ GKV + FR
Sbjct 135 GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGY- 193
Query 120 MLGQEPRQTTSNIGHLSRPTITAL-VHGLNRNYYSIAINCRKGELEHQMLANLHTNKWSD 178
+ P + S + I VH + YY++ ++ K L+ ++L L W +
Sbjct 194 ---KPPDEGPSEYQTIPLNKIEDFGVHC--KQYYALEVSYFKSSLDRKLLELLWNKYWVN 248
Query 179 AL 180
L
Sbjct 249 TL 250
> xla:444720 cops5, MGC84682; COP9 constitutive photomorphogenic
homolog subunit 5; K09613 COP9 signalosome complex subunit
5 [EC:3.4.-.-]
Length=332
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 95/182 (52%), Gaps = 11/182 (6%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSGNS--VSIEAVDYVYQTEMLEQLKRTGRPQMVV 60
EVMGLMLG+ +D T+ ++D F++P G V+ +A Y Y +E K+ GR + +
Sbjct 74 EVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAI 132
Query 61 GWYHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVK-GKVVMDCFRLINPHLV 119
GWYHSHPG+GCW SG DV+TQ +Q V VV+DP +++ GKV + FR
Sbjct 133 GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGY- 191
Query 120 MLGQEPRQTTSNIGHLSRPTITAL-VHGLNRNYYSIAINCRKGELEHQMLANLHTNKWSD 178
+ P + S + I VH + YY++ + K L+ ++L L W +
Sbjct 192 ---KPPDEGPSEYQTIPLNKIEDFGVHC--KQYYALEVTYFKSSLDRKLLELLWNKYWVN 246
Query 179 AL 180
L
Sbjct 247 TL 248
> ath:AT1G22920 CSN5A; CSN5A (COP9 SIGNALOSOME 5A); K09613 COP9
signalosome complex subunit 5 [EC:3.4.-.-]
Length=357
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 68/115 (59%), Gaps = 4/115 (3%)
Query 1 TREVMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIEAVD--YVYQTEMLEQLKRTGRPQM 58
T E+MGLM G+ D T+ V+D F++P G + A Y Y E + K GR +
Sbjct 78 TIEIMGLMQGKTEGD-TIIVMDAFALPVEGTETRVNAQSDAYEYMVEYSQTSKLAGRLEN 136
Query 59 VVGWYHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVK-GKVVMDCFR 112
VVGWYHSHPG+GCW SG DV+TQ +Q + VV+DP ++V GKV + FR
Sbjct 137 VVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVIDPTRTVSAGKVEIGAFR 191
> sce:YDL216C RRI1, CSN5, JAB1; Catalytic subunit of the COP9
signalosome (CSN) complex that acts as an isopeptidase in cleaving
the ubiquitin-like protein Nedd8 from SCF ubiquitin ligases;
metalloendopeptidase involved in the adaptation to pheromone
signaling (EC:3.4.-.-); K09613 COP9 signalosome complex
subunit 5 [EC:3.4.-.-]
Length=440
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 14/125 (11%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIEAV--DYVYQTEMLEQL---------- 50
E+MG+++G + D V V+D F++P G + A Y Y + ++++
Sbjct 92 EIMGILMGFTLKDNIV-VMDCFNLPVVGTETRVNAQLESYEYMVQYIDEMYNHNDGGDGR 150
Query 51 KRTGRPQMVVGWYHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVV-MD 109
G VVGW+HSHPG+ CW S D+ TQ ++ V +VVDP++S++ K++ M
Sbjct 151 DYKGAKLNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMG 210
Query 110 CFRLI 114
FR I
Sbjct 211 AFRTI 215
> tgo:TGME49_108590 Mov34/MPN/PAD-1 domain-containing protein
; K09613 COP9 signalosome complex subunit 5 [EC:3.4.-.-]
Length=321
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 87/211 (41%), Gaps = 43/211 (20%)
Query 3 EVMGLMLG----------------EFIDDFTVRVVDVFSMPQSGNSVSIEA--------V 38
EVMGLMLG E + D V VF +P G + A V
Sbjct 73 EVMGLMLGSVSPISSSVKSASSPLEQLGDQAFVVHSVFRLPVEGTETRVNAGAEANEYMV 132
Query 39 DYVYQTEMLEQLKRTGRPQ--------MVVGWYHSHPGFGCWFSGTDVNTQQSFEQLNAR 90
D+V + E E L RP VVGWYHSHPG+ CW SG DV TQ+ ++
Sbjct 133 DFVQRAE--EALSPPVRPDEPDEGVGLCVVGWYHSHPGYRCWLSGIDVETQKLHQRGQDP 190
Query 91 AVGVVVDPIQSVK-GKVVMDCFRLINPHLVMLGQEPRQTT---SNIGHLSRPTITALVHG 146
V VVVDP +++ G+V + FR H Q R + S P A G
Sbjct 191 FVAVVVDPTRTLATGEVDIGAFRCYPDH----SQNARLDSVQKSRHDQAGVPAEKASDFG 246
Query 147 LN-RNYYSIAINCRKGELEHQMLANLHTNKW 176
++ R YY + + L+ ++ L W
Sbjct 247 VHWREYYKLNVELLCSSLDALLIERLSEAAW 277
> mmu:210766 Brcc3, C6.1A, MGC29148; BRCA1/BRCA2-containing complex,
subunit 3 (EC:3.1.2.15); K11864 BRCA1/BRCA2-containing
complex subunit 3
Length=291
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 67/154 (43%), Gaps = 50/154 (32%)
Query 3 EVMGLMLGEFIDDF---------------------TVRVVDVFSM--------------- 26
EVMGL +GE DD T+R+V + S+
Sbjct 33 EVMGLCIGELNDDIRSDSKFTYTGTEMRTVQEKMDTIRIVHIHSVIILRRSDKRKDRVEI 92
Query 27 -PQSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVGWYHSHPGFGCWFSGTDVNTQQSFE 85
P+ ++ S EA E L +L TGRP VVGWYHSHP W S DV TQ ++
Sbjct 93 SPEQLSAASTEA-------ERLAEL--TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQ 143
Query 86 QLNARAVGVV----VDPIQSVKGKVVMDCFRLIN 115
++ VG++ ++ + G+V+ CF+ I
Sbjct 144 MMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQ 177
> dre:100333845 BRCA1/BRCA2-containing complex subunit 3-like;
K11864 BRCA1/BRCA2-containing complex subunit 3
Length=260
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSG---NSVSIEAVDYVYQTEMLEQLKR-TGRPQM 58
EVMGL +GE + V + V + +S + V I + E+L TGRP
Sbjct 27 EVMGLCIGEVDTNRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAEMTGRPMR 86
Query 59 VVGWYHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVV----VDPIQSVKGKVVMDCFR 112
VVGWYHSHP W S DV TQ ++ ++ VG++ ++ + G+V+ CF+
Sbjct 87 VVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQ 144
> hsa:79184 BRCC3, BRCC36, C6.1A, CXorf53; BRCA1/BRCA2-containing
complex, subunit 3 (EC:3.1.2.15); K11864 BRCA1/BRCA2-containing
complex subunit 3
Length=291
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 66/154 (42%), Gaps = 50/154 (32%)
Query 3 EVMGLMLGEFIDDF---------------------TVRVVDVFSM--------------- 26
EVMGL +GE DD VR+V + S+
Sbjct 33 EVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKVDAVRIVHIHSVIILRRSDKRKDRVEI 92
Query 27 -PQSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVGWYHSHPGFGCWFSGTDVNTQQSFE 85
P+ ++ S EA E L +L TGRP VVGWYHSHP W S DV TQ ++
Sbjct 93 SPEQLSAASTEA-------ERLAEL--TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQ 143
Query 86 QLNARAVGVV----VDPIQSVKGKVVMDCFRLIN 115
++ VG++ ++ + G+V+ CF+ I
Sbjct 144 MMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQ 177
> xla:447688 brcc3, MGC99130, brcc36; BRCA1/BRCA2-containing complex,
subunit 3 (EC:3.1.2.15); K11864 BRCA1/BRCA2-containing
complex subunit 3
Length=261
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSG---NSVSIEAVDYVYQTEMLEQLKR-TGRPQM 58
EVMGL +GE V + V + +S + V I T ++L TGRP
Sbjct 27 EVMGLCIGEVDTQKLVHIHSVIILRRSDKRKDRVEISPEQLSAATIEADRLADITGRPMR 86
Query 59 VVGWYHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVV----VDPIQSVKGKVVMDCFRLI 114
VVGWYHSHP W S DV TQ ++ ++ VG++ ++ + G+++ CF+ +
Sbjct 87 VVGWYHSHPHITVWPSHVDVRTQAMYQMMDVGFVGLIFSCFIEDKNTKTGRILYTCFQSV 146
Query 115 N 115
Sbjct 147 Q 147
> mmu:368203 Gm5136, C6.1AL, EG368203, MGC155743, MGC155745; predicted
gene 5136 (EC:3.1.2.15); K11864 BRCA1/BRCA2-containing
complex subunit 3
Length=291
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 13/93 (13%)
Query 27 PQSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVGWYHSHPGFGCWFSGTDVNTQQSFEQ 86
P+ ++ SIEA QT GRP VVGWYHSHP W S DV TQ ++
Sbjct 94 PEQLSAASIEAERLAEQT---------GRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQM 144
Query 87 LNARAVGVV----VDPIQSVKGKVVMDCFRLIN 115
++ VG++ ++ + G+V+ CF+ +
Sbjct 145 MDQSFVGLIFACFIEDKPTKIGRVLYTCFQSVQ 177
> xla:496043 eif3h, eif3s3; eukaryotic translation initiation
factor 3, subunit H; K03247 translation initiation factor 3
subunit H
Length=334
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Query 4 VMGLMLGEFIDDFTVRVVDVFSMPQ-SGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVGW 62
V G++LG +DD + + + F PQ + + V + V Y Q EM+ L+ + VGW
Sbjct 45 VQGVLLGLVVDD-RLEITNCFPFPQHTEDDVDFDEVQY--QMEMMRSLRHVNIDHLHVGW 101
Query 63 YHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRLINPHLVMLG 122
Y S +G + S +++Q S++ +V ++ DPI++ +G + + +RL P L+ +
Sbjct 102 YQS-TFYGTFVSRALLDSQFSYQHAIEESVVLIYDPIKTSQGSLSLKAYRL-TPKLMEIC 159
Query 123 QE 124
+E
Sbjct 160 KE 161
> dre:445306 eif3ha, eIF3h-A, eif3h, eif3s3, fj02c04, wu:fj02c04,
zgc:101085; eukaryotic translation initiation factor 3,
subunit H, a; K03247 translation initiation factor 3 subunit
H
Length=335
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query 4 VMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVGWY 63
V G++LG ++D + + + F PQ +E + YQ EM+ L+ + VGWY
Sbjct 46 VQGVLLGLVVED-RLEITNCFPFPQHTED-DVEFDEVQYQMEMMRSLRHVNIDHLHVGWY 103
Query 64 HSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRLINPHLVMLGQ 123
S +G + S +++Q S++ +V ++ DP+++ +G + + +RL P L+ + +
Sbjct 104 QS-TYYGSFVSRALLDSQFSYQHAIEESVVLIYDPLKTAQGSLCLKAYRL-TPKLMEICK 161
Query 124 E 124
E
Sbjct 162 E 162
> dre:567151 eif3hb, MGC123049, zgc:123049; eukaryotic translation
initiation factor 3, subunit H, b; K03247 translation initiation
factor 3 subunit H
Length=333
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query 4 VMGLMLGEFIDDFTVRVVDVFSMPQ-SGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVGW 62
V G++LG ++D + + + F PQ + + + V Y Q EM+ L+ + VGW
Sbjct 44 VQGVLLGLVVED-QLEITNCFPFPQHTEDDADFDEVQY--QMEMMRSLRHVNIDHLHVGW 100
Query 63 YHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRLINPHLVMLG 122
Y S +G + S +++Q S++ +V ++ DPI++ +G + + +RL P L+ +
Sbjct 101 YQST-LYGSFVSRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLCLKAYRL-TPKLMEIC 158
Query 123 QE 124
+E
Sbjct 159 KE 160
> mmu:68135 Eif3h, 1110008A16Rik, 40kD, 9430017H16Rik, EIF3-P40,
EIF3-gamma, Eif3s3, MGC107627; eukaryotic translation initiation
factor 3, subunit H; K03247 translation initiation factor
3 subunit H
Length=352
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 66/125 (52%), Gaps = 6/125 (4%)
Query 1 TREVMGLMLGEFIDDFTVRVVDVFSMPQ-SGNSVSIEAVDYVYQTEMLEQLKRTGRPQMV 59
T V G++LG ++D + + + F PQ + + + V Y Q EM+ L+ +
Sbjct 60 TEVVQGVLLGLVVED-RLEITNCFPFPQHTEDDADFDEVQY--QMEMMRSLRHVNIDHLH 116
Query 60 VGWYHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRLINPHLV 119
VGWY S +G + + +++Q S++ +V ++ DPI++ +G + + +RL P L+
Sbjct 117 VGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRL-TPKLM 174
Query 120 MLGQE 124
+ +E
Sbjct 175 EVCKE 179
> hsa:8667 EIF3H, EIF3S3, MGC102958, eIF3-gamma, eIF3-p40; eukaryotic
translation initiation factor 3, subunit H; K03247 translation
initiation factor 3 subunit H
Length=352
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 66/125 (52%), Gaps = 6/125 (4%)
Query 1 TREVMGLMLGEFIDDFTVRVVDVFSMPQ-SGNSVSIEAVDYVYQTEMLEQLKRTGRPQMV 59
T V G++LG ++D + + + F PQ + + + V Y Q EM+ L+ +
Sbjct 60 TEVVQGVLLGLVVED-RLEITNCFPFPQHTEDDADFDEVQY--QMEMMRSLRHVNIDHLH 116
Query 60 VGWYHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRLINPHLV 119
VGWY S +G + + +++Q S++ +V ++ DPI++ +G + + +RL P L+
Sbjct 117 VGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRL-TPKLM 174
Query 120 MLGQE 124
+ +E
Sbjct 175 EVCKE 179
> xla:779416 mysm1, 2A-DUB, MGC154322; myb-like, SWIRM and MPN
domains 1 (EC:3.1.2.15); K11865 protein MYSM1
Length=818
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIE---AVDYVYQTEMLEQLKRTGRPQMV 59
EV+GL+ G + + + VV++ ++ + NS+S +D V QT+ E L G V
Sbjct 568 EVIGLLGGRYTE--SESVVEICAV-EPCNSLSTGLQCEMDPVSQTQASEALASRG--YSV 622
Query 60 VGWYHSHPGFGCWFSGTDVNTQQSFEQLNARA----VGVVVDP 98
+GWYHSHP F S D++TQ ++ +R +G+++ P
Sbjct 623 IGWYHSHPAFDPNPSIRDIDTQAKYQNYFSRGGAKFLGMIISP 665
> hsa:114803 MYSM1, 2A-DUB, 2ADUB, DKFZp779J1554, DKFZp779J1721,
KIAA1915, RP4-592A1.1; Myb-like, SWIRM and MPN domains 1
(EC:3.1.2.15); K11865 protein MYSM1
Length=828
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSM-PQSGNSVSIEA-VDYVYQTEMLEQLKRTGRPQMVV 60
EV+GL+ G + + +VV+V + P + S ++ +D V QT+ E L G V+
Sbjct 597 EVIGLLGGRYSE--VDKVVEVCAAEPCNSLSTGLQCEMDPVSQTQASETLAVRGF--SVI 652
Query 61 GWYHSHPGFGCWFSGTDVNTQQS----FEQLNARAVGVVVDP 98
GWYHSHP F S D++TQ F + A+ +G++V P
Sbjct 653 GWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIVSP 694
> mmu:320713 Mysm1, C130067A03Rik, C530050H10Rik; myb-like, SWIRM
and MPN domains 1 (EC:3.1.2.15); K11865 protein MYSM1
Length=819
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIE---AVDYVYQTEMLEQLKRTGRPQMV 59
EV+GL+ G + + +V++V + + NS+S +D V QT+ E L G V
Sbjct 588 EVIGLLGGRYSE--ADKVLEVCAA-EPCNSLSTGLQCEMDPVSQTQASETLALRGY--SV 642
Query 60 VGWYHSHPGFGCWFSGTDVNTQQS----FEQLNARAVGVVVDP 98
+GWYHSHP F S D++TQ F + A+ +G++V P
Sbjct 643 IGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIVSP 685
> ath:AT1G10600 hypothetical protein
Length=166
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query 60 VGWYHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRLINP 116
VGW H+HP GC+ S D++T S++ + A +VV P S K + F+L +P
Sbjct 66 VGWIHTHPSQGCFMSSVDLHTHYSYQVMVPEAFAIVVAPTDSSKSYGI---FKLTDP 119
> dre:100331111 histone H2A deubiquitinase MYSM1-like
Length=2360
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIE---AVDYVYQTEMLEQLKRTGRPQMV 59
EV+GL+ G + ++ +V+ + S + NS+S +D V QT+ E L G V
Sbjct 2075 EVIGLLGGTYEEED--KVLKICSA-EPCNSLSTGLQCEMDPVSQTQASEVLGVKGL--SV 2129
Query 60 VGWYHSHPGFGCWFSGTDVNTQQSFEQLNARA----VGVVVDP 98
VGWYHSHP F S D++TQ ++ +R +G++V P
Sbjct 2130 VGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAPFIGMIVSP 2172
> dre:561225 mysm1, im:7153144, si:ch211-59d15.8; Myb-like, SWIRM
and MPN domains 1 (EC:3.1.2.15); K11865 protein MYSM1
Length=822
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query 3 EVMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIEA-VDYVYQTEMLEQLKRTGRPQMVVG 61
EV+GL+ G + ++ V + + P + S ++ +D V QT+ E L G VVG
Sbjct 537 EVIGLLGGTYEEEDKVLKI-CSAEPCNSLSTGLQCEMDPVSQTQASEVLGVKGL--SVVG 593
Query 62 WYHSHPGFGCWFSGTDVNTQQSFEQLNARA----VGVVVDP 98
WYHSHP F S D++TQ ++ +R +G++V P
Sbjct 594 WYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAPFIGMIVSP 634
> ath:AT1G80210 hypothetical protein; K11864 BRCA1/BRCA2-containing
complex subunit 3
Length=371
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 9/115 (7%)
Query 1 TREVMGLMLG--EFIDDFTVRVVDVF-SMPQSGNSVSIEAVD------YVYQTEMLEQLK 51
T E+MGL+LG E+ D ++ + PQS + + V+ +
Sbjct 25 TEEIMGLLLGDIEYSKDGGSATAMIWGASPQSRSDRQKDRVETNPEQLAAASAQADRMTI 84
Query 52 RTGRPQMVVGWYHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKV 106
TGR V+GWYHSHP S DV TQ ++ L++ +G++ KV
Sbjct 85 STGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDSGFIGLIFSCFSEDANKV 139
> ath:AT3G06820 mov34 family protein; K11864 BRCA1/BRCA2-containing
complex subunit 3
Length=405
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query 1 TREVMGLMLGEFI-----DDFTVRVVDVFSMPQSG---NSVSIEAVDYVYQTEMLEQLK- 51
T E+MGL+LG+ + T + P+S + V + +++
Sbjct 25 TEEIMGLLLGDIEYSKNGESATAMIWGASPQPRSDRQKDRVETNPEQLAAASAQADRMTI 84
Query 52 RTGRPQMVVGWYHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVV 95
TGR V+GWYHSHP S DV TQ ++ L++ +G++
Sbjct 85 STGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDSGFIGLI 128
> ath:AT1G48790 mov34 family protein; K11866 STAM-binding protein
[EC:3.1.2.15]
Length=507
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query 60 VGWYHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRLINP 116
+GW H+HP C+ S DV+T S++ + AV +V+ P S + + FRL P
Sbjct 407 LGWIHTHPTQSCFMSSIDVHTHYSYQIMLPEAVAIVMAPQDSSRNHGI---FRLTTP 460
> xla:444711 stambpl1, MGC84444; STAM binding protein-like 1 (EC:3.1.2.15);
K11867 AMSH-like protease [EC:3.1.2.15]
Length=431
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 24/140 (17%)
Query 3 EVMGLMLGEFI-DDFTVRVVDVFSMPQSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVG 61
E G++ G+ D+FT+ V V + +E V+ ++ + L + +G
Sbjct 287 ETCGILCGKLTHDEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHNL-------LTLG 339
Query 62 WYHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRLINPHLVML 121
W H+HP + S D++T S++ + A+ +V P + G FRL + ++ +
Sbjct 340 WIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHNDTG-----IFRLTSAGMLEV 394
Query 122 -----------GQEPRQTTS 130
+EPRQ ++
Sbjct 395 SVCKKKGFHPHSKEPRQFST 414
> xla:414627 hypothetical protein MGC81376; K11867 AMSH-like protease
[EC:3.1.2.15]
Length=431
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query 3 EVMGLMLGEFI-DDFTVRVVDVFSMPQSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVG 61
E G++ G+ D+FT+ V V + +E V+ ++ + L + +G
Sbjct 287 ETCGILCGKLTHDEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHNL-------LTLG 339
Query 62 WYHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDP 98
W H+HP + S D++T S++ + A+ +V P
Sbjct 340 WIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSP 376
> hsa:57559 STAMBPL1, ALMalpha, AMSH-FP, AMSH-LP, FLJ31524, KIAA1373,
bA399O19.2; STAM binding protein-like 1 (EC:3.1.2.15);
K11867 AMSH-like protease [EC:3.1.2.15]
Length=436
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 13/114 (11%)
Query 3 EVMGLMLGEFI-DDFTVRVVDVFSMPQSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVG 61
E G++ G+ ++FT+ V V + +E V+ ++ + L + +G
Sbjct 292 ETCGILCGKLTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDL-------LTLG 344
Query 62 WYHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRLIN 115
W H+HP + S D++T S++ + A+ +V P G FRL N
Sbjct 345 WIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTG-----IFRLTN 393
> mmu:76630 Stambpl1, 1700095N21Rik, 8230401J17Rik, ALMalpha,
AMSH-FP; STAM binding protein like 1 (EC:3.1.2.15); K11867 AMSH-like
protease [EC:3.1.2.15]
Length=436
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 13/114 (11%)
Query 3 EVMGLMLGEFI-DDFTVRVVDVFSMPQSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVG 61
E G++ G+ ++FT+ V V + +E V+ ++ + L + +G
Sbjct 292 ETCGILCGKLTHNEFTITHVVVPKQSAGPDYCDVENVEELFNVQDQHGL-------LTLG 344
Query 62 WYHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRLIN 115
W H+HP + S D++T S++ + A+ +V P G FRL N
Sbjct 345 WIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTG-----IFRLTN 393
> ath:AT1G10840 TIF3H1; TIF3H1; translation initiation factor;
K03247 translation initiation factor 3 subunit H
Length=337
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 6/113 (5%)
Query 1 TREVMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVV 60
T +++GL +G ++ V + F P + IEA YQ EM+ L+ V
Sbjct 48 TGQLLGLDVGSVLE-----VTNCFPFPVRDDDEEIEADGANYQLEMMRCLREVNVDNNTV 102
Query 61 GWYHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVDPIQSVKGKVVMDCFRL 113
GWY S G + + + T ++++ R V ++ DP ++ G + + +L
Sbjct 103 GWYQST-VLGSYQTVELIETFMNYQENIKRCVCIIYDPSKADLGVLALKALKL 154
> tgo:TGME49_069250 26S proteasome regulatory subunit, putative
; K03038 26S proteasome regulatory subunit N8
Length=343
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Query 1 TREVMGLMLGEFIDDFTVRVVDVFSMP--QSGNSVSIEAVDYVYQTEMLEQLKRTGRPQM 58
+R V+G +LGE I D + V + F++P + ++ +D Y + K+ +
Sbjct 58 SRRVVGTLLGE-ISDGEIHVTNSFALPFEEDPKDPNVWYLDRNYHEHLYHMFKKVNTRER 116
Query 59 VVGWYHSHPGFGCWFSGTDVNTQQSFEQLNARAVGVVVD--PIQSV 102
V+GWY + P TD+ + F + V V+VD P SV
Sbjct 117 VLGWYSTGPQVRM----TDLEIHEIFRRYTPNPVYVIVDINPKDSV 158
> sce:YOR261C RPN8; Essential, non-ATPase regulatory subunit of
the 26S proteasome; has similarity to the human p40 proteasomal
subunit and to another S. cerevisiae regulatory subunit,
Rpn11p; K03038 26S proteasome regulatory subunit N8
Length=338
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query 2 REVMGLMLGEFIDDFTVRVVDVFSMP--QSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMV 59
+ +G++LG+ + T+RV + F++P + + + +D+ Y M E K+ + +
Sbjct 31 KRCVGVILGD-ANSSTIRVTNSFALPFEEDEKNSDVWFLDHNYIENMNEMCKKINAKEKL 89
Query 60 VGWYHSHPGF 69
+GWYHS P
Sbjct 90 IGWYHSGPKL 99
> ath:AT2G39990 EIF2; EIF2; translation initiation factor; K03249
translation initiation factor 3 subunit F
Length=293
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query 4 VMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIEAVDYVYQTEMLEQLKRTGRPQMVVGWY 63
V+G +LG + D TV + + +++P + +S + AVD Y ML + + +VGWY
Sbjct 52 VIGTLLGSILPDGTVDIRNSYAVPHNESSDQV-AVDIDYHHNMLASHLKVNSKETIVGWY 110
Query 64 HSHPG 68
+ G
Sbjct 111 STGAG 115
Lambda K H
0.319 0.133 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 6945028560
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40