bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_4458_orf1 Length=217 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_032520 brix domain-containing protein ; K14847 ribo... 156 6e-38 mmu:67239 Rpf2, 2810470K21Rik, AU040229, AU043242, Bxdc1; ribo... 85.9 9e-17 xla:379998 rpf2, MGC53329, bxdc1; ribosome production factor 2... 84.7 2e-16 hsa:84154 RPF2, BXDC1, FLJ21087, bA397G5.4; ribosome productio... 84.0 4e-16 pfa:PF10_0278 nucleolar preribosomal assembly protein, putative 83.6 5e-16 ath:AT3G23620 brix domain-containing protein; K14847 ribosome ... 82.4 1e-15 cpv:cgd8_4680 conserved protein; Py hit 23481194 ; K14847 ribo... 82.0 1e-15 tpv:TP01_0566 hypothetical protein; K14847 ribosome production... 81.6 2e-15 dre:406587 rpf2, bxdc1, ik:tdsubc_1a3, wu:fe17d08, wu:fj16d06,... 75.1 2e-13 bbo:BBOV_I002810 19.m02110; Brix domain containing protein; K1... 72.8 1e-12 cel:Y54E10A.10 hypothetical protein; K14847 ribosome productio... 70.9 3e-12 sce:YKR081C RPF2; Essential protein involved in the processing... 67.0 4e-11 pfa:PF07_0122 nucleolus BRIX protein, putative; K14820 ribosom... 34.7 0.26 mmu:382051 Pdp2, 4833426J09Rik, Gm1705, KIAA1348, mKIAA1348; p... 33.9 0.44 tgo:TGME49_094820 type I fatty acid synthase, putative (EC:6.2... 30.0 6.2 > tgo:TGME49_032520 brix domain-containing protein ; K14847 ribosome production factor 2 Length=401 Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 98/231 (42%), Positives = 136/231 (58%), Gaps = 22/231 (9%) Query 1 FENAEPIEYLARKNGCGLFAYASSSKKRPARLVLGRVYDNQILDMQEFAVAHYTPAAAFA 60 FE+ EYL +KN CG F SSSKKRP RLV GR++ N++LDM EF V HY A++F Sbjct 79 FEDVSTAEYLCQKNDCGTFCMGSSSKKRPNRLVFGRMFANELLDMYEFQVVHYMGASSFT 138 Query 61 AVQAPAAGSAPLLLLQGGLWDVSDEMRNARNIFGDLFR-----AAEVPPDGPTQKLYLGG 115 V+ P GS PL+LLQG ++ ++ R RNI D+FR A V +G + KLYL G Sbjct 139 GVEKPRLGSRPLVLLQGAAFESTEVHRGLRNIMADVFRGGASHAGAVAGEG-SAKLYLKG 197 Query 116 VDRLIAVSAVQATPGSAATAATT----AAAAKAVIGGSEDCETEA--PASGATTD-GTDA 168 +DR++A++A++ T G+A+ + A A I G+ + A P A D G Sbjct 198 IDRVVAITALE-TDGAASHLSRKLHLEAGGTTATIEGAANAAVAATLPVPDAGNDQGGSG 256 Query 169 PAAD--SGYSGDVLICVRHYRIALVKTADAGGVGG--PAVKLVEVGPQIDL 215 P+AD + +G LIC+R YR+ + + G VG P V+LVEVGPQID+ Sbjct 257 PSADKATAAAGKPLICLRQYRLVMHR----GEVGSKVPRVELVEVGPQIDM 303 > mmu:67239 Rpf2, 2810470K21Rik, AU040229, AU043242, Bxdc1; ribosome production factor 2 homolog (S. cerevisiae); K14847 ribosome production factor 2 Length=273 Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 70/127 (55%), Gaps = 9/127 (7%) Query 1 FENAEPIEYLARKNGCGLFAYASSSKKRPARLVLGRVYDNQILDMQEFAVAHYTPAAAFA 60 FE+ +E+ ++K+ C LF + S +KKRP LV+GR+YD +LDM E + + Sbjct 39 FEDQTSLEFFSKKSDCSLFMFGSHNKKRPNNLVIGRMYDYHVLDMIELGIEKFVSLKDIK 98 Query 61 AVQAPAAGSAPLLLLQGGLWDVSDEMRNARNIFGDLFRAAEVPPDGPT-QKLYLGGVDRL 119 + P G+ P+L+ G +DV+++ R +N+ D FR GPT + L G++ + Sbjct 99 TSKCP-EGTKPMLIFAGDDFDVTEDFRRLKNLLIDFFR-------GPTVSNVRLAGLEYV 150 Query 120 IAVSAVQ 126 + +A+ Sbjct 151 LHFTALN 157 > xla:379998 rpf2, MGC53329, bxdc1; ribosome production factor 2 homolog; K14847 ribosome production factor 2 Length=308 Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 9/126 (7%) Query 1 FENAEPIEYLARKNGCGLFAYASSSKKRPARLVLGRVYDNQILDMQEFAVAHYTPAAAFA 60 FE+ +E+ A+K+ C LF + S +KKRP L+ GR+YD +LDM E V Y Sbjct 72 FEDQTSLEFFAKKSDCSLFVFGSHNKKRPNDLIFGRMYDFHVLDMVELGVEKYVSLQEIK 131 Query 61 AVQAPAAGSAPLLLLQGGLWDVSDEMRNARNIFGDLFRAAEVPPDGPTQK-LYLGGVDRL 119 + P G+ PLL+ G +++S++ R +++ D FR GPT + L G++ + Sbjct 132 NCKCP-EGTKPLLIFAGDAFEMSEDYRRLKSLLIDFFR-------GPTVTGVRLAGLEHV 183 Query 120 IAVSAV 125 + +AV Sbjct 184 LHFTAV 189 > hsa:84154 RPF2, BXDC1, FLJ21087, bA397G5.4; ribosome production factor 2 homolog (S. cerevisiae); K14847 ribosome production factor 2 Length=306 Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 71/127 (55%), Gaps = 9/127 (7%) Query 1 FENAEPIEYLARKNGCGLFAYASSSKKRPARLVLGRVYDNQILDMQEFAVAHYTPAAAFA 60 FE+ +E+ ++K+ C LF + S +KKRP LV+GR+YD +LDM E + ++ Sbjct 72 FEDQTSLEFFSKKSDCSLFMFGSHNKKRPNNLVIGRMYDYHVLDMIELGIENFVSLKDIK 131 Query 61 AVQAPAAGSAPLLLLQGGLWDVSDEMRNARNIFGDLFRAAEVPPDGPT-QKLYLGGVDRL 119 + P G+ P+L+ G +DV+++ R +++ D FR GPT + L G++ + Sbjct 132 NSKCP-EGTKPMLIFAGDDFDVTEDYRRLKSLLIDFFR-------GPTVSNIRLAGLEYV 183 Query 120 IAVSAVQ 126 + +A+ Sbjct 184 LHFTALN 190 > pfa:PF10_0278 nucleolar preribosomal assembly protein, putative Length=483 Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 6/130 (4%) Query 14 NGCGLFAYASSSKKRPARLVLGRVYDNQILDMQEFAVAHYTPAAAFAAVQAPAAGSAPLL 73 N C F S+KK+P+R ++GR+Y+N+ILD F++ Y P F + + P++ Sbjct 95 NNCSFFFSVFSTKKKPSRFIIGRLYNNKILDYYVFSLISYIPLKLFPLSKEILYDTKPIV 154 Query 74 LLQGGLWDVSDEMRNARNIFGDLFRAAEVPPDGPTQKLYLGGVDRLIAVSAVQATPGSAA 133 L+QG ++ ++ R +NI D F+ V D ++K + RLI +SA Q A Sbjct 155 LIQGSYFEQNETNRYVKNILFDFFKHKNV--DTFSKK----SIQRLIVISAYQKNNEINA 208 Query 134 TAATTAAAAK 143 A K Sbjct 209 DLGKKVEAGK 218 > ath:AT3G23620 brix domain-containing protein; K14847 ribosome production factor 2 Length=314 Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 67/124 (54%), Gaps = 8/124 (6%) Query 7 IEYLARKNGCGLFAYASSSKKRPARLVLGRVYDNQILDMQEFAVAHYTPAAAFAAVQ--A 64 +E+ ++K C +F Y S +KKRP LVLGR+YD+Q+ D+ E + ++ AF+ + A Sbjct 78 LEFFSQKTDCSIFVYGSHTKKRPDNLVLGRMYDHQVYDLIEVGIENFKSLRAFSYDKKFA 137 Query 65 PAAGSAPLLLLQGGLWDVSDEMRNARNIFGDLFRAAEVPPDGPTQKLYLGGVDRLIAVSA 124 P G+ P + G ++ E+++ + + DLFR V L L G+DR SA Sbjct 138 PHEGTKPFICFIGEGFENVSELKHLKEVLTDLFRGEVV------DNLNLTGLDRAYVCSA 191 Query 125 VQAT 128 + T Sbjct 192 ISPT 195 > cpv:cgd8_4680 conserved protein; Py hit 23481194 ; K14847 ribosome production factor 2 Length=332 Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 12/143 (8%) Query 7 IEYLARKNGCGLFAYASSSKKRPARLVLGRVYDNQILDMQEFAVAHYTPAAAFAAVQAPA 66 +E L+ K+G + +A+SSKK P RL+ R YD+ ILDM EF V +Y + ++ P Sbjct 81 MEQLSYKHGSSISIFANSSKKHPFRLIFTRYYDSHILDMYEFNVLNYKGIS--PNMELPK 138 Query 67 AGSAPLLLLQGGLWDVSDEMRNARNIFGDLFRAAEVPPDGPT---QKLYLGGVDRLIAVS 123 GS P+++ QG ++ D ++ R +F D F GP KL+L G D LI V+ Sbjct 139 YGSKPIVICQGAPFESDDVYKSIRTMFFDTF-------SGPIVRGSKLFLKGFDHLILVT 191 Query 124 AVQATPGSAATAATTAAAAKAVI 146 A + +T + + I Sbjct 192 AYETDNEEINKQSTIIGSMNSKI 214 > tpv:TP01_0566 hypothetical protein; K14847 ribosome production factor 2 Length=342 Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/219 (28%), Positives = 90/219 (41%), Gaps = 35/219 (15%) Query 3 NAEPIEYLARKNGCGLFAYASSSKKRPARLVLGRVYDNQILDMQEFAVAHYTPAAAFAAV 62 N E + K G GL+ ASS+KKRP + GR+Y+ +ILD+ + V Y P F + Sbjct 84 NHRECELICGKLGFGLYVVASSNKKRPISIGFGRMYNRKILDLCQLKVLQYKPTQHFNQL 143 Query 63 QAPAAGSAPLLLLQG-GLWDVSDEMRNARNIFGDLFRAAEVPPDGPTQ-KLYLGGVDRLI 120 S PL+++QG G + RNI D+F+ GPT K+ L + LI Sbjct 144 DV-ELNSRPLIVVQGSGFGQQKGHLTTVRNILLDIFK-------GPTHTKISLDNIKHLI 195 Query 121 AVSAVQATPGSAATAATTAAAAKAVIGGSEDCETEAPASGATTDGTDAPAADSGYSGDVL 180 ++ + + S+ T TT + E E E Y Sbjct 196 TITLIDQS-NSSNTVDTTNT-----MDNEESVEVERRKV---------------YKNGPK 234 Query 181 ICVRHYRIALVK----TADAGGVGGPAVKLVEVGPQIDL 215 + R Y I L+K + P V L E+GP ID Sbjct 235 VLFRRYLITLLKPKKLEHNHSNTMLPRVSLSEIGPSIDF 273 > dre:406587 rpf2, bxdc1, ik:tdsubc_1a3, wu:fe17d08, wu:fj16d06, xx:tdsubc_1a3, zgc:77150; ribosome production factor 2 homolog (S. cerevisiae); K14847 ribosome production factor 2 Length=308 Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 33/126 (26%), Positives = 67/126 (53%), Gaps = 7/126 (5%) Query 1 FENAEPIEYLARKNGCGLFAYASSSKKRPARLVLGRVYDNQILDMQEFAVAHYTPAAAFA 60 FE++ +E+ ++K+ C LF + S +KKRP L+ GR++D +LDM E + ++ Sbjct 72 FEDSTALEFFSKKSDCSLFLFGSHNKKRPNNLIFGRMFDFHVLDMFELGIENFRSLTDIK 131 Query 61 AVQAPAAGSAPLLLLQGGLWDVSDEMRNARNIFGDLFRAAEVPPDGPTQKLYLGGVDRLI 120 + P G+ P+L+ G L++ E + +++ D F V + L G++ ++ Sbjct 132 MDKCP-EGTKPMLVFAGDLFETDREYQRLKSVLTDFFCGPRVSA------VRLAGLEHVL 184 Query 121 AVSAVQ 126 +A++ Sbjct 185 HFTALE 190 > bbo:BBOV_I002810 19.m02110; Brix domain containing protein; K14847 ribosome production factor 2 Length=322 Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 91/217 (41%), Gaps = 53/217 (24%) Query 2 ENAEPIEYLARKNGCGLFAYASSSKKRPARLVLGRVYDNQILDMQEFAVAHYTPAAAFAA 61 N E ++ + GCGL+ ASS+KKRP L GR+YD +ILD Y P F Sbjct 76 HNHRIAEMVSNRMGCGLYVVASSNKKRPLSLGFGRLYDGKILDCCHLRALKYVPFDFFKG 135 Query 62 VQ--APAAGSAPLLLLQGGLW-DVSDEMRNARNIFGDLFRAAEVPPDGPTQKLYLGGVDR 118 + S PL++ QG + + S MR R+I D FR PP T + L +++ Sbjct 136 PNDLEISHNSYPLVVAQGAHFGEESGRMRTVRDILLDFFR----PPQ--TGCVSLENINQ 189 Query 119 LIAVSAVQATPGSAATAATTAAAAKAVIGGSEDCETEAPASGATTDGTDAPAADSGYSGD 178 ++ +++V D E + P + Sbjct 190 VLVLTSV-------------------------DGEGDQPGAQPQR--------------- 209 Query 179 VLICVRHYRIALVKTADAGGVGGPAVKLVEVGPQIDL 215 I +R Y+I L K++D + P V L E+GP IDL Sbjct 210 --ILLRRYQINLNKSSDDPKL--PHVSLTEIGPHIDL 242 > cel:Y54E10A.10 hypothetical protein; K14847 ribosome production factor 2 Length=297 Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 7/128 (5%) Query 1 FENAEPIEYLARKNGCGLFAYASSSKKRPARLVLGRVYDNQILDMQEFAVAHYTPAAAFA 60 FE+ PI K LF S+SKK+P L GR YD Q+LDM E + Y ++ F Sbjct 69 FEDETPIVRAGSKFDTSLFVLGSNSKKKPNCLTFGRTYDGQLLDMAELRITSYKSSSNFE 128 Query 61 AVQAPAAGSAPLLLLQGGLWDVSDEMRNARNIFGDLFRAAEVPPDGPTQKLYLGGVDRLI 120 A + GS P ++L+G ++ +M+ N+ D FR +V + L G++ +I Sbjct 129 AAKM-TLGSKPCVILEGAAFESDGDMKRIGNLMVDWFRGPKVDT------VRLEGLETVI 181 Query 121 AVSAVQAT 128 +A+ T Sbjct 182 VFTALDET 189 > sce:YKR081C RPF2; Essential protein involved in the processing of pre-rRNA and the assembly of the 60S ribosomal subunit; interacts with ribosomal protein L11; localizes predominantly to the nucleolus; constituent of 66S pre-ribosomal particles; K14847 ribosome production factor 2 Length=344 Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 51/217 (23%), Positives = 82/217 (37%), Gaps = 53/217 (24%) Query 1 FENAEPIEYLARKNGCGLFAYASSSKKRPARLVLGRVYDNQILDMQEFAVA-HYTPAAAF 59 FE+ P+E+ + KN C L +SSKKR + R + +I DM E VA ++ + F Sbjct 69 FEDMSPLEFFSEKNDCSLMVLMTSSKKRKNNMTFIRTFGYKIYDMIELMVADNFKLLSDF 128 Query 60 AAVQAPAAGSAPLLLLQGGLWDVSDEMRNARNIFGDLFRAAEVPPDGPTQKLYLGGVDRL 119 + G P+ QG +D + +++F D FR Sbjct 129 KKLTF-TVGLKPMFTFQGAAFDTHPVYKQIKSLFLDFFRG-------------------- 167 Query 120 IAVSAVQATPGSAATAATTAAAAKAVIGGSEDCETEAPASGATTDGTDAPAADSGYSGDV 179 +T A + VI + G DG P Sbjct 168 ------------ESTDLQDVAGLQHVISMT--------IQGDFQDGEPLPN--------- 198 Query 180 LICVRHYRIALVKTADAGGVGGPAVKLVEVGPQIDLR 216 + R Y++ K +D GG P ++LVE+GP++D + Sbjct 199 -VLFRVYKLKSYK-SDQGGKRLPRIELVEIGPRLDFK 233 > pfa:PF07_0122 nucleolus BRIX protein, putative; K14820 ribosome biogenesis protein BRX1 Length=416 Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 5/52 (9%) Query 168 APAADSGYSG---DVLICVRHYRIALVKTADAGGVGGPAVKLVEVGPQIDLR 216 P D Y+ + LI RHY+I V AD+ V +LVE+GPQ L Sbjct 302 KPFYDHCYNFFYVNDLIYFRHYQILPVTLADSNNVNKQ--QLVEIGPQFTLH 351 > mmu:382051 Pdp2, 4833426J09Rik, Gm1705, KIAA1348, mKIAA1348; pyruvate dehyrogenase phosphatase catalytic subunit 2 (EC:3.1.3.43); K01102 pyruvate dehydrogenase phosphatase [EC:3.1.3.43] Length=532 Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 52/134 (38%), Gaps = 7/134 (5%) Query 27 KRPARLVLGRVYDNQILDMQEFAVAHY-TP----AAAFAAVQAPAAGSAPLLLLQGGLWD 81 K R VL R +D + L++ +F HY TP A L+L GLWD Sbjct 360 KELQRNVLARGFDTEALNIYQFTPPHYYTPPYLTAKPEVTYHRLRRQDKFLVLASDGLWD 419 Query 82 VSDEMRNARNIFGDLFRAAEVPPDGPTQKLYLGGVDRLIAVSAVQATPGSAATAATTAAA 141 + R + G L + PD + LG + L+ +A+ AA T Sbjct 420 MLGNEDVVRLVVGHLSKVGRHKPDLDQRPANLGLMQSLLLQR--KASGLHAADQNTATHL 477 Query 142 AKAVIGGSEDCETE 155 + IG +E E E Sbjct 478 IRHAIGSNEYGEME 491 > tgo:TGME49_094820 type I fatty acid synthase, putative (EC:6.2.1.3 1.1.1.1 1.2.1.31 1.1.1.9 2.3.1.94 1.1.1.36 2.3.1.161 2.3.1.86 2.3.1.39 2.3.1.16 2.8.2.20 1.6.5.5 1.1.1.14) Length=10021 Score = 30.0 bits (66), Expect = 6.2, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 49/127 (38%), Gaps = 18/127 (14%) Query 79 LWDVSDEMRNARNIFG---------DLFRAAEVPPDGPTQK------LYLGGVDRLIAVS 123 L ++D R + I G D A+ P+GP Q+ L +GGVD L Sbjct 7244 LRHLADAQREGKRILGIVRGTAVNHDGRSASLTAPNGPAQQDVIRSALQIGGVDPLDVAL 7303 Query 124 AVQATPGSAATAATTAAAAKAVIGGSEDCETEAPASGATTDGTDAPAADSGYSG--DVLI 181 G+A A KAV G ++ GA SG +G VL+ Sbjct 7304 VESHGTGTALGDPIEMGAIKAVYGAGRSADSPL-VVGALKSYIGHLEGSSGIAGILKVLL 7362 Query 182 CVRHYRI 188 C+RH+ + Sbjct 7363 CLRHHEV 7369 Lambda K H 0.316 0.132 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 7009334380 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40