bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_4302_orf1 Length=132 Score E Sequences producing significant alignments: (Bits) Value mmu:17710 COX3; cytochrome c oxidase subunit III (EC:1.9.3.1);... 211 6e-55 hsa:4514 COX3, COIII, MTCO3; cytochrome c oxidase III; K02262 ... 208 4e-54 dre:140541 COX3, mtco3; cytochrome c oxidase subunit III; K022... 201 4e-52 xla:2642084 COX3; cytochrome c oxidase subunit III; K02262 cyt... 194 4e-50 ath:ArthMp065 cox3; cytochrome c oxidase subunit 3; K02262 cyt... 142 2e-34 ath:AT2G07687 cytochrome c oxidase subunit 3 (EC:1.9.3.1); K02... 142 2e-34 cel:COX3 cytochrome c oxidase subunit III; K02262 cytochrome c... 122 2e-28 sce:Q0275 COX3, OXI2; Cox3p (EC:1.9.3.1); K02262 cytochrome c ... 120 2e-27 pfa:PlfaoMp1 coxIII; putative cytochrome oxidase III; K02262 c... 45.4 4e-05 bbo:BBOV_VI000020 cytochrome c oxidase subunit III 29.3 3.6 sce:YML023C NSE5; Essential subunit of the Mms21-Smc5-Smc6 com... 29.3 3.7 hsa:64127 NOD2, ACUG, BLAU, CARD15, CD, CLR16.3, IBD1, NLRC2, ... 28.9 4.3 mmu:67287 Parp6, 1700119G14Rik, 2310028P13Rik, 3110038K10Rik, ... 28.5 5.7 hsa:56965 PARP6, MGC131971, pART17; poly (ADP-ribose) polymera... 28.5 5.7 tgo:TGME49_079320 hypothetical protein 28.5 6.0 tpv:TP04_0435 hypothetical protein 28.5 6.1 > mmu:17710 COX3; cytochrome c oxidase subunit III (EC:1.9.3.1); K02262 cytochrome c oxidase subunit III [EC:1.9.3.1] Length=261 Score = 211 bits (536), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 103/132 (78%), Positives = 112/132 (84%), Gaps = 0/132 (0%) Query 1 PTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITGAPHSLIEGGRKHILQALFFPI 60 PT +LGGCWPPTGI PLNPLEVPLLNTSVLLASGVSIT A HSL+EG R H+ QAL I Sbjct 108 PTHDLGGCWPPTGISPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNHMNQALLITI 167 Query 61 TLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSPFLIVCFFPQLKFHF 120 LG+YFT+LQASEY+E F+ISDG+YGSTFF+ATGFHGLHVIIGS FLIVC QLKFHF Sbjct 168 MLGLYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHF 227 Query 121 TSNPHFGFETAA 132 TS HFGFE AA Sbjct 228 TSKHHFGFEAAA 239 > hsa:4514 COX3, COIII, MTCO3; cytochrome c oxidase III; K02262 cytochrome c oxidase subunit III [EC:1.9.3.1] Length=261 Score = 208 bits (529), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 103/132 (78%), Positives = 112/132 (84%), Gaps = 0/132 (0%) Query 1 PTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITGAPHSLIEGGRKHILQALFFPI 60 PTP+LGG WPPTGI PLNPLEVPLLNTSVLLASGVSIT A HSL+E R ++QAL I Sbjct 108 PTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALLITI 167 Query 61 TLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSPFLIVCFFPQLKFHF 120 LG+YFTLLQASEY+E+PFTISDG+YGSTFFVATGFHGLHVIIGS FL +CF QL FHF Sbjct 168 LLGLYFTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTFLTICFIRQLMFHF 227 Query 121 TSNPHFGFETAA 132 TS HFGFE AA Sbjct 228 TSKHHFGFEAAA 239 > dre:140541 COX3, mtco3; cytochrome c oxidase subunit III; K02262 cytochrome c oxidase subunit III [EC:1.9.3.1] Length=261 Score = 201 bits (511), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 98/132 (74%), Positives = 110/132 (83%), Gaps = 0/132 (0%) Query 1 PTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITGAPHSLIEGGRKHILQALFFPI 60 PTPELGGCWPPTG+ L+P EVPLLNT+VLLASGV++T A HSL+EG RK +Q+L I Sbjct 108 PTPELGGCWPPTGLTTLDPFEVPLLNTAVLLASGVTVTWAHHSLMEGERKQAIQSLALTI 167 Query 61 TLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSPFLIVCFFPQLKFHF 120 LG+YFT LQA EYYEAPFTI+DGVYGSTFFVATGFHGLHVIIGS FL VC Q+ FHF Sbjct 168 LLGLYFTALQAMEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQVLFHF 227 Query 121 TSNPHFGFETAA 132 TS+ HFGFE AA Sbjct 228 TSDHHFGFEAAA 239 > xla:2642084 COX3; cytochrome c oxidase subunit III; K02262 cytochrome c oxidase subunit III [EC:1.9.3.1] Length=260 Score = 194 bits (494), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 95/131 (72%), Positives = 107/131 (81%), Gaps = 0/131 (0%) Query 1 PTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITGAPHSLIEGGRKHILQALFFPI 60 PT ELG CWPPTGI PLNP EVPLLNT+VLLASGV++T A HS++ G RK +Q+L I Sbjct 108 PTYELGECWPPTGITPLNPFEVPLLNTAVLLASGVTVTWAHHSIMHGDRKEAIQSLTLTI 167 Query 61 TLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSPFLIVCFFPQLKFHF 120 LG+YFT LQA EYYEAPFTI+DGVYGSTFFVATGFHGLHVIIGS FL VC Q+++HF Sbjct 168 LLGLYFTALQAMEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSLFLSVCLLRQIQYHF 227 Query 121 TSNPHFGFETA 131 TS HFGFE A Sbjct 228 TSKHHFGFEAA 238 > ath:ArthMp065 cox3; cytochrome c oxidase subunit 3; K02262 cytochrome c oxidase subunit III [EC:1.9.3.1] Length=265 Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 70/132 (53%), Positives = 88/132 (66%), Gaps = 0/132 (0%) Query 1 PTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITGAPHSLIEGGRKHILQALFFPI 60 P E+GG WPP GI L+P E+P LNT +L +SG ++T A H+++ G K + AL + Sbjct 111 PAVEIGGIWPPKGIEVLDPWEIPFLNTPILPSSGAAVTWAHHAILAGKEKRAVYALVATV 170 Query 61 TLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSPFLIVCFFPQLKFHF 120 L + FT Q EYY+APFTISD +YGSTFF+ATGFHG HVIIG+ FLI+C Q H Sbjct 171 LLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHL 230 Query 121 TSNPHFGFETAA 132 T H GFE AA Sbjct 231 TKEHHVGFEAAA 242 > ath:AT2G07687 cytochrome c oxidase subunit 3 (EC:1.9.3.1); K02262 cytochrome c oxidase subunit III [EC:1.9.3.1] Length=265 Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 70/132 (53%), Positives = 88/132 (66%), Gaps = 0/132 (0%) Query 1 PTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITGAPHSLIEGGRKHILQALFFPI 60 P E+GG WPP GI L+P E+P LNT +L +SG ++T A H+++ G K + AL + Sbjct 111 PAVEIGGIWPPKGIEVLDPWEIPFLNTPILPSSGAAVTWAHHAILAGKEKRAVYALVATV 170 Query 61 TLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSPFLIVCFFPQLKFHF 120 L + FT Q EYY+APFTISD +YGSTFF+ATGFHG HVIIG+ FLI+C Q H Sbjct 171 LLALVFTGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHL 230 Query 121 TSNPHFGFETAA 132 T H GFE AA Sbjct 231 TKEHHVGFEAAA 242 > cel:COX3 cytochrome c oxidase subunit III; K02262 cytochrome c oxidase subunit III [EC:1.9.3.1] Length=255 Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 64/131 (48%), Positives = 82/131 (62%), Gaps = 2/131 (1%) Query 1 PTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITGAPHSLIEGGRKHILQALFFPI 60 P ELG W P G+H +NP VPLLNT +LL+SGV++T A HSL+ K ++ Sbjct 104 PVHELGETWSPFGMHLVNPFGVPLLNTIILLSSGVTVTWAHHSLLS--NKSCTNSMILTC 161 Query 61 TLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSPFLIVCFFPQLKFHF 120 L YFT +Q EY EA F+I+DGV+GS F+++TGFHG+HV+ G FL F LK HF Sbjct 162 LLAAYFTGIQLMEYMEASFSIADGVFGSIFYLSTGFHGIHVLCGGLFLAFNFLRLLKNHF 221 Query 121 TSNPHFGFETA 131 N H G E A Sbjct 222 NYNHHLGLEFA 232 > sce:Q0275 COX3, OXI2; Cox3p (EC:1.9.3.1); K02262 cytochrome c oxidase subunit III [EC:1.9.3.1] Length=269 Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 59/130 (45%), Positives = 77/130 (59%), Gaps = 0/130 (0%) Query 1 PTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITGAPHSLIEGGRKHILQALFFPI 60 P LG CWPP GI + P E+PLLNT +LL+SG ++T + H+LI G R L L Sbjct 116 PDVTLGACWPPVGIEAVQPTELPLLNTIILLSSGATVTYSHHALIAGNRNKALSGLLITF 175 Query 61 TLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSPFLIVCFFPQLKFHF 120 L V F Q EY A FTISDGVYGS F+ TG H LH+++ + L V ++ +H Sbjct 176 WLIVIFVTCQYIEYTNAAFTISDGVYGSVFYAGTGLHFLHMVMLAAMLGVNYWRMRNYHL 235 Query 121 TSNPHFGFET 130 T+ H G+ET Sbjct 236 TAGHHVGYET 245 > pfa:PlfaoMp1 coxIII; putative cytochrome oxidase III; K02262 cytochrome c oxidase subunit III [EC:1.9.3.1] Length=279 Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 1/85 (1%) Query 21 EVPLLNTSVLLASGVSITGAPHSLIEGGRKHILQALFFPI-TLGVYFTLLQASEYYEAPF 79 + +L + +LAS +T IE G + ++ I LG F LQ +EY + Sbjct 134 RMLILTITFILASASCMTACLQVFIEKGMSFEISSIICIIYLLGECFASLQTTEYLHLSY 193 Query 80 TISDGVYGSTFFVATGFHGLHVIIG 104 I+D VY + F+ TG H HV+IG Sbjct 194 HINDTVYTTLFYCVTGLHFSHVVIG 218 > bbo:BBOV_VI000020 cytochrome c oxidase subunit III Length=228 Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 0/47 (0%) Query 62 LGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSPFL 108 +G F Q EY ++D + F + TG H LHV +G F+ Sbjct 141 IGSLFLSYQGDEYTFLQCGLNDSWFSLAFLIITGLHSLHVCVGVLFI 187 > sce:YML023C NSE5; Essential subunit of the Mms21-Smc5-Smc6 complex; required for cell viability and DNA repair Length=556 Score = 29.3 bits (64), Expect = 3.7, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Query 48 GRKHILQALFFPITLGVYFTLLQASEYYEAPFTISDGVYGST 89 G+ H L + F I L V FTL SEYY+ P ++ Y ++ Sbjct 56 GKSHNLAVIPFDIIL-VLFTLSTLSEYYKEPILRANDPYNTS 96 > hsa:64127 NOD2, ACUG, BLAU, CARD15, CD, CLR16.3, IBD1, NLRC2, NOD2B, PSORAS1; nucleotide-binding oligomerization domain containing 2; K10165 nucleotide-binding oligomerization domain-containing protein 2 Length=1040 Score = 28.9 bits (63), Expect = 4.3, Method: Composition-based stats. Identities = 9/20 (45%), Positives = 13/20 (65%), Gaps = 0/20 (0%) Query 2 TPELGGCWPPTGIHPLNPLE 21 +P+L GCW P +HP L+ Sbjct 116 SPKLHGCWDPHSLHPARDLQ 135 > mmu:67287 Parp6, 1700119G14Rik, 2310028P13Rik, 3110038K10Rik, C030013N01Rik, PARP-6; poly (ADP-ribose) polymerase family, member 6 (EC:2.4.2.30) Length=630 Score = 28.5 bits (62), Expect = 5.7, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 4/36 (11%) Query 66 FTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHV 101 F LL + EA F + +YGSTF FHG H+ Sbjct 446 FLLLSSPPAKEARFRTAKKLYGSTF----AFHGSHI 477 > hsa:56965 PARP6, MGC131971, pART17; poly (ADP-ribose) polymerase family, member 6 (EC:2.4.2.30) Length=630 Score = 28.5 bits (62), Expect = 5.7, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 4/36 (11%) Query 66 FTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHV 101 F LL + EA F + +YGSTF FHG H+ Sbjct 446 FLLLSSPPAKEARFRTAKKLYGSTF----AFHGSHI 477 > tgo:TGME49_079320 hypothetical protein Length=4967 Score = 28.5 bits (62), Expect = 6.0, Method: Composition-based stats. Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 4/38 (10%) Query 10 PPTGIHPLNPL--EVPLLNTSVLLASGVSITG--APHS 43 PP+G+HP++P ++PLL + L S + G APH+ Sbjct 3222 PPSGLHPVSPSAPQLPLLVSPAQLGSEAAHAGQPAPHA 3259 > tpv:TP04_0435 hypothetical protein Length=1804 Score = 28.5 bits (62), Expect = 6.1, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 12/97 (12%) Query 22 VPLLNTSVLLASGVSITGAPHSLIEGGRKHILQALFFPITLGVYFTLLQASEYYEAPFTI 81 +P++ + LL + IT + IE + G+ + L E + Sbjct 756 LPMITSKHLLNDSIEITRYKGTRIETCKHR-----------GIIMSYLSVMFINEMGVEL 804 Query 82 SDGVYGSTFFVATGFHGLHVIIGSPFLIVCFFPQLKF 118 D V+G + G+H ++ I P+ V F+P +KF Sbjct 805 FDSVHGDGLSIIKGYHDIYYNI-PPYRHVPFWPNVKF 840 Lambda K H 0.326 0.145 0.468 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2099897216 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40