bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_4144_orf3
Length=142
Score E
Sequences producing significant alignments: (Bits) Value
hsa:4512 COX1, COI, MTCO1; cytochrome c oxidase subunit I; K02... 129 3e-30
mmu:17708 COX1, CoxI; cytochrome c oxidase subunit I (EC:1.9.3... 126 2e-29
xla:2642088 COX1; cytochrome c oxidase subunit I; K02256 cytoc... 118 5e-27
dre:140539 COX1, mtco1; cytochrome c oxidase subunit I; K02256... 114 7e-26
sce:Q0045 COX1, OXI3; Cox1p (EC:1.9.3.1); K02256 cytochrome c ... 53.1 3e-07
ath:ArthMp109 cox1; cytochrome c oxidase subunit 1; K02256 cyt... 51.6 9e-07
cel:COX1 cytochrome c oxidase subunit I; K02256 cytochrome c o... 46.6 3e-05
bbo:BBOV_VI000010 cytochrome c oxidase subunit I; K02256 cytoc... 34.3 0.12
xla:100337597 fut9, xFUT9, xFuc-TIX; fucosyltransferase 9 (alp... 32.3 0.45
cpv:cgd1_2720 hypothetical protein 30.4 1.7
hsa:84514 GHDC, D11LGP1, LGP1; GH3 domain containing 30.4 1.9
> hsa:4512 COX1, COI, MTCO1; cytochrome c oxidase subunit I; K02256
cytochrome c oxidase subunit I [EC:1.9.3.1]
Length=513
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 80/139 (57%), Gaps = 0/139 (0%)
Query 1 VLANFPYFFPKGGVFFFLGGFFHCFPLFSGFFFKDTGAKIPFPIFFGGANKTFFPQPFLG 60
V+A+F Y G VF +GGF H FPLFSG+ T AKI F I F G N TFFPQ FLG
Sbjct 373 VVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFTIMFIGVNLTFFPQHFLG 432
Query 61 FLGNPGGFSASPGASPIGNFFSSKGSFFSLTAVFLMFFFFGEAFAFKGKFLPLDLPPQIL 120
G P +S P A N SS GSF SLTAV LM F EAFA K K L ++ P L
Sbjct 433 LSGMPRRYSDYPDAYTTWNILSSVGSFISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNL 492
Query 121 EGLKGAPPPFPHLEDPPFF 139
E L G PPP+ E+P +
Sbjct 493 EWLYGCPPPYHTFEEPVYM 511
> mmu:17708 COX1, CoxI; cytochrome c oxidase subunit I (EC:1.9.3.1);
K02256 cytochrome c oxidase subunit I [EC:1.9.3.1]
Length=514
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 79/142 (55%), Gaps = 0/142 (0%)
Query 1 VLANFPYFFPKGGVFFFLGGFFHCFPLFSGFFFKDTGAKIPFPIFFGGANKTFFPQPFLG 60
V+A+F Y G VF + GF H FPLFSGF DT AK F I F G N TFFPQ FLG
Sbjct 373 VVAHFHYVLSMGAVFAIMAGFVHWFPLFSGFTLDDTWAKAHFAIMFVGVNMTFFPQHFLG 432
Query 61 FLGNPGGFSASPGASPIGNFFSSKGSFFSLTAVFLMFFFFGEAFAFKGKFLPLDLPPQIL 120
G P +S P A N SS GSF SLTAV +M F EAFA K + + + L
Sbjct 433 LSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLIMIFMIWEAFASKREVMSVSYASTNL 492
Query 121 EGLKGAPPPFPHLEDPPFFTLK 142
E L G PPP+ E+P + +K
Sbjct 493 EWLHGCPPPYHTFEEPTYVKVK 514
> xla:2642088 COX1; cytochrome c oxidase subunit I; K02256 cytochrome
c oxidase subunit I [EC:1.9.3.1]
Length=518
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 76/134 (56%), Gaps = 0/134 (0%)
Query 1 VLANFPYFFPKGGVFFFLGGFFHCFPLFSGFFFKDTGAKIPFPIFFGGANKTFFPQPFLG 60
V+A+F Y G VF +GGF H FPLF+G+ +T AKI F + F G N TFFPQ FLG
Sbjct 373 VVAHFHYVLSMGAVFAIMGGFIHWFPLFTGYTLHETWAKIHFGVMFAGVNLTFFPQHFLG 432
Query 61 FLGNPGGFSASPGASPIGNFFSSKGSFFSLTAVFLMFFFFGEAFAFKGKFLPLDLPPQIL 120
P +S P A + N SS GS SL AV +M F EAFA K + +L +L
Sbjct 433 LSAMPRRYSDYPDAYTLWNTVSSIGSLISLVAVIMMMFIIWEAFAAKREVTTYELTSTML 492
Query 121 EGLKGAPPPFPHLE 134
E L+G P P+ L+
Sbjct 493 EWLQGCPTPYHTLK 506
> dre:140539 COX1, mtco1; cytochrome c oxidase subunit I; K02256
cytochrome c oxidase subunit I [EC:1.9.3.1]
Length=516
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 76/142 (53%), Gaps = 0/142 (0%)
Query 1 VLANFPYFFPKGGVFFFLGGFFHCFPLFSGFFFKDTGAKIPFPIFFGGANKTFFPQPFLG 60
V+A+F Y G VF + GF H FPLF+G+ KI F + F G N TFFPQ FLG
Sbjct 373 VVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLNSVWTKIHFGVMFIGVNLTFFPQHFLG 432
Query 61 FLGNPGGFSASPGASPIGNFFSSKGSFFSLTAVFLMFFFFGEAFAFKGKFLPLDLPPQIL 120
G P +S P A + N SS GS SL AV + F EAF K + L ++L +
Sbjct 433 LAGMPRRYSDYPDAYALWNTVSSIGSLISLVAVIMFLFILWEAFTAKREVLSVELTATNV 492
Query 121 EGLKGAPPPFPHLEDPPFFTLK 142
E L G PPP+ E+P F ++
Sbjct 493 EWLHGCPPPYHTFEEPAFVQIQ 514
> sce:Q0045 COX1, OXI3; Cox1p (EC:1.9.3.1); K02256 cytochrome
c oxidase subunit I [EC:1.9.3.1]
Length=534
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 0/105 (0%)
Query 1 VLANFPYFFPKGGVFFFLGGFFHCFPLFSGFFFKDTGAKIPFPIFFGGANKTFFPQPFLG 60
V+ +F Y G +F G+++ P G + + A+I F + F GAN FFP FLG
Sbjct 373 VVGHFHYVLSMGAIFSLFAGYYYWSPQILGLNYNEKLAQIQFWLIFIGANVIFFPMHFLG 432
Query 61 FLGNPGGFSASPGASPIGNFFSSKGSFFSLTAVFLMFFFFGEAFA 105
G P P A N+ +S GSF + ++FL + +
Sbjct 433 INGMPRRIPDYPDAFAGWNYVASIGSFIATLSLFLFIYILYDQLV 477
> ath:ArthMp109 cox1; cytochrome c oxidase subunit 1; K02256 cytochrome
c oxidase subunit I [EC:1.9.3.1]
Length=527
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 56/136 (41%), Gaps = 6/136 (4%)
Query 1 VLANFPYFFPKGGVFFFLGGFFHCFPLFSGFFFKDTGAKIPFPIFFGGANKTFFPQPFLG 60
V+A+F Y G VF GF++ G + +T +I F I F G N TFFP FLG
Sbjct 375 VVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGQIHFWITFFGVNLTFFPMHFLG 434
Query 61 FLGNPGGFSASPGASPIGNFFSSKGSFFSLTAVFLMFFFFGEAFAFKGKF------LPLD 114
G P P A N SS GS+ S+ + F + L+
Sbjct 435 LSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWALE 494
Query 115 LPPQILEGLKGAPPPF 130
L LE + +PP F
Sbjct 495 LNSTTLEWMVQSPPAF 510
> cel:COX1 cytochrome c oxidase subunit I; K02256 cytochrome c
oxidase subunit I [EC:1.9.3.1]
Length=525
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 0/104 (0%)
Query 1 VLANFPYFFPKGGVFFFLGGFFHCFPLFSGFFFKDTGAKIPFPIFFGGANKTFFPQPFLG 60
V+++F Y G VF G + +G+ F + F G N TFFP F G
Sbjct 380 VVSHFHYVLSLGAVFGIFTGVTLWWSFITGYVLDKLMMSAVFILLFIGVNLTFFPLHFAG 439
Query 61 FLGNPGGFSASPGASPIGNFFSSKGSFFSLTAVFLMFFFFGEAF 104
G P + P + N +S GS S +FL + E+F
Sbjct 440 LHGFPRKYLDYPDVYSVWNIIASYGSIISTAGLFLFIYVLLESF 483
> bbo:BBOV_VI000010 cytochrome c oxidase subunit I; K02256 cytochrome
c oxidase subunit I [EC:1.9.3.1]
Length=477
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 0/86 (0%)
Query 1 VLANFPYFFPKGGVFFFLGGFFHCFPLFSGFFFKDTGAKIPFPIFFGGANKTFFPQPFLG 60
V+ +F + G + L F+C L G F + I P F G TF P FLG
Sbjct 376 VVGHFHFVLSIGAIISLLSFIFYCQRLLVGTIFSNQLILIIIPAFMAGIFLTFMPMHFLG 435
Query 61 FLGNPGGFSASPGASPIGNFFSSKGS 86
F P P NF + GS
Sbjct 436 FTPLPRRIPDYPDDMWGWNFLCTIGS 461
> xla:100337597 fut9, xFUT9, xFuc-TIX; fucosyltransferase 9 (alpha
(1,3) fucosyltransferase) (EC:2.4.1.152); K03663 4-galactosyl-N-acetylglucosaminide
3-alpha-L-fucosyltransferase [EC:2.4.1.152]
Length=359
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query 53 FFPQPFLGFLGNPGGFSASPGASPIGNFFSSKGSFFSLTAVFLMFFFFGEAFAFKG 108
+ +P ++ +P ++ + NFFSSK ++++ T V + + FG+ F K
Sbjct 28 IYVKPTNNWISSP--IESAHSVLKMKNFFSSKQNYYNETVVLIWVWPFGQTFELKS 81
> cpv:cgd1_2720 hypothetical protein
Length=760
Score = 30.4 bits (67), Expect = 1.7, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 12/45 (26%)
Query 20 GFFHCFPLFSGFFFKDT------------GAKIPFPIFFGGANKT 52
GFF+CF + F+F++T G K PI GG NKT
Sbjct 363 GFFNCFAARAKFYFENTFLGEATFDLSSDGIKAFCPIISGGPNKT 407
> hsa:84514 GHDC, D11LGP1, LGP1; GH3 domain containing
Length=491
Score = 30.4 bits (67), Expect = 1.9, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 0/39 (0%)
Query 99 FFGEAFAFKGKFLPLDLPPQILEGLKGAPPPFPHLEDPP 137
FF A+A G L L+L P+ GL PP P +E P
Sbjct 248 FFSPAYAASGGVLGLNLQPEQPHGLYLLPPGAPFIELLP 286
Lambda K H
0.333 0.156 0.527
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2683748972
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40