bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_4060_orf2
Length=129
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_097800 structural maintenance of chromosomes protei... 84.7 6e-17
bbo:BBOV_II001730 18.m06134; smc family/structural maintenance... 66.6 2e-11
pfa:MAL13P1.96 chromosome segregation protein, putative; K0667... 58.9 4e-09
tpv:TP04_0409 condensin subunit; K06674 structural maintenance... 52.4 4e-07
ath:AT5G62410 SMC2; SMC2 (STRUCTURAL MAINTENANCE OF CHROMOSOME... 49.7 2e-06
ath:AT3G47460 ATSMC2; ATSMC2; transporter; K06674 structural m... 47.8 8e-06
sce:YFR031C SMC2; Smc2p; K06674 structural maintenance of chro... 43.5 2e-04
xla:397800 smc2, SMC-2, xcap-e; structural maintenance of chro... 40.8 0.001
cel:F28B3.7 him-1; High Incidence of Males (increased X chromo... 40.8 0.001
hsa:10592 SMC2, CAP-E, CAPE, FLJ10093, SMC2L1, hCAP-E; structu... 39.3 0.003
dre:321452 smc2, SMC2L1, fb92e05, wu:fb92e05, zeh1628, zgc:553... 39.3 0.004
dre:100334001 structural maintenance of chromosomes 2-like; K0... 39.3 0.004
mmu:14211 Smc2, 5730502P04Rik, AI255214, AW545314, CAP-E, CAPE... 38.1 0.008
cpv:cgd4_2200 SMC2 protein ; K06674 structural maintenance of ... 37.7 0.009
xla:380182 smc1a, MGC53133, smc1aa, smc1l1; structural mainten... 37.0 0.014
xla:100379087 smc1ab, SMC-1A, smc1, smc1a, smc1l1, xSMC1; stru... 37.0 0.014
mmu:24061 Smc1a, 5830426I24Rik, KIAA0178, SMC-1A, Sb1.8, Smc1,... 37.0 0.014
hsa:8243 SMC1A, CDLS2, DKFZp686L19178, DXS423E, KIAA0178, MGC1... 37.0 0.014
dre:559665 smc1a; structural maintenance of chromosomes 1A; K0... 37.0 0.016
mmu:140557 Smc1b, SMC-1B, SMC1beta, Smc1l2; structural mainten... 33.1 0.20
xla:399092 smc3, Cspg6, xsmc3; structural maintenance of chrom... 32.3 0.36
bbo:BBOV_IV005990 23.m06059; hypothetical protein 30.8 1.1
hsa:27127 SMC1B, FLJ43748, SMC1BETA, SMC1L2, bK268H5, bK268H5.... 30.4 1.3
mmu:13006 Smc3, Bamacan, Cspg6, HCAP, Mmip1, SMC-3, SmcD; stru... 30.0 1.8
hsa:9126 SMC3, BAM, BMH, CDLS3, CSPG6, HCAP, SMC3L1; structura... 30.0 1.8
tpv:TP01_0677 ATP-specific succinyl-CoA synthetase beta subuni... 29.3 3.3
> tgo:TGME49_097800 structural maintenance of chromosomes protein,
putative ; K06674 structural maintenance of chromosome
2
Length=1217
Score = 84.7 bits (208), Expect = 6e-17, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 53/71 (74%), Gaps = 0/71 (0%)
Query 18 YDVRRHSKVAEYAFGGGLICRSAAIAQKITYQKNCRLAFPTATAEGDVFQTGGIMAGGSV 77
+D RH KVA Y FGG LIC +A +A+KITYQ N R AFPT T EGDVFQTGG+MAGG
Sbjct 618 FDANRHEKVALYTFGGSLICATAEMAEKITYQPNKRQAFPTVTVEGDVFQTGGVMAGGGS 677
Query 78 RDVRQTMLTWK 88
V++T+L WK
Sbjct 678 GHVKETLLLWK 688
> bbo:BBOV_II001730 18.m06134; smc family/structural maintenance
of chromosome; K06674 structural maintenance of chromosome
2
Length=1213
Score = 66.6 bits (161), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 0/64 (0%)
Query 22 RHSKVAEYAFGGGLICRSAAIAQKITYQKNCRLAFPTATAEGDVFQTGGIMAGGSVRDVR 81
+ SK+A+Y G LIC S+ IA+KI YQK+ A+PTAT +GD F GG M+GGS + +
Sbjct 639 KFSKLAKYLAGNSLICNSSQIARKIAYQKDRSRAYPTATLQGDKFDVGGSMSGGSNKGMH 698
Query 82 QTML 85
+L
Sbjct 699 MVLL 702
> pfa:MAL13P1.96 chromosome segregation protein, putative; K06674
structural maintenance of chromosome 2
Length=1218
Score = 58.9 bits (141), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query 15 LRRYDVRRHSKVAEYAFGGGLICRSAAIAQKITYQKNCRLAFPTATAEGDVFQTGGIMAG 74
+ YD + ++ +Y F G LIC + + +KITY N +L++ T T EGD F T G M+G
Sbjct 624 IMEYD-KNLERIIQYLFNGTLICSNVDLCKKITYNPNKKLSYTTITLEGDKFDTSGSMSG 682
Query 75 GSVRDVRQTMLTWK 88
GS +++ +L ++
Sbjct 683 GSNKNINLFLLNYE 696
> tpv:TP04_0409 condensin subunit; K06674 structural maintenance
of chromosome 2
Length=1246
Score = 52.4 bits (124), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query 10 LALWALRRYDVRRHSKVAEYAFGGGLICRSAAIAQKITYQKNCRLAFPTATAEGDVFQTG 69
L W + YD R ++ +Y G + C + A A+KI Y K + FPTAT +GD +
Sbjct 617 LGYWEVFEYD-ERFLRLVQYVGGNCVFCSNDADARKIAYSKELKRRFPTATLQGDKYDIS 675
Query 70 GIMAGG 75
G M+GG
Sbjct 676 GTMSGG 681
> ath:AT5G62410 SMC2; SMC2 (STRUCTURAL MAINTENANCE OF CHROMOSOMES
2); transporter; K06674 structural maintenance of chromosome
2
Length=1175
Score = 49.7 bits (117), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query 28 EYAFGGGLICRSAAIAQKITYQKNCRLAFPTATAEGDVFQTGGIMAGGS 76
EY FG +C++ +A+++ + ++ R P+ T EGD+FQ G++ GGS
Sbjct 619 EYVFGSTFVCKTTDVAKEVAFNRDIRT--PSVTLEGDIFQPSGLLTGGS 665
> ath:AT3G47460 ATSMC2; ATSMC2; transporter; K06674 structural
maintenance of chromosome 2
Length=1171
Score = 47.8 bits (112), Expect = 8e-06, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query 28 EYAFGGGLICRSAAIAQKITYQKNCRLAFPTATAEGDVFQTGGIMAGGS 76
EY FG +C++ A+++ + + R P+ T EGDVFQ G++ GGS
Sbjct 616 EYVFGSTFVCKTTDAAKEVAFNREIRT--PSVTLEGDVFQPSGLLTGGS 662
> sce:YFR031C SMC2; Smc2p; K06674 structural maintenance of chromosome
2
Length=1170
Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query 24 SKVAEYAFGGGLICRSAAIAQKITYQKNCRLAFPTATAEGDVFQTGGIMAGGSVRDVRQT 83
+K E+ FG LIC A+KIT+ R + T +GDV+ G ++GGS R+ ++
Sbjct 619 TKAMEFIFGNSLICEDPETAKKITFHPKIRAR--SITLQGDVYDPEGTLSGGS-RNTSES 675
Query 84 ML 85
+L
Sbjct 676 LL 677
> xla:397800 smc2, SMC-2, xcap-e; structural maintenance of chromosomes
2; K06674 structural maintenance of chromosome 2
Length=1203
Score = 40.8 bits (94), Expect = 0.001, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query 25 KVAEYAFGGGLICRSAAIAQKITYQKNCRLAFPTATAEGDVFQTGGIMAGGS 76
K EY FG L+C + A+K+T+ K R+ T T GD F G ++GG+
Sbjct 619 KAMEYVFGTTLVCDTMDNAKKVTFDK--RIMTKTVTLGGDTFDPQGTLSGGA 668
> cel:F28B3.7 him-1; High Incidence of Males (increased X chromosome
loss) family member (him-1); K06636 structural maintenance
of chromosome 1
Length=1262
Score = 40.8 bits (94), Expect = 0.001, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query 25 KVAEYAFGGGLICRSAAIAQKITYQK-NCRLAFPTATAEGDVFQTGGIMAGGSVRDVRQT 83
K ++ G L+C S A+++ Y + F + +G +FQ G+M+GGS D+RQ
Sbjct 620 KALQFVCGNALVCESQEDAKQLAYGGGELKDRFKAVSMDGTLFQQSGVMSGGSA-DLRQK 678
Query 84 MLTWKVRQTARVIRIESNSLFPK 106
W + + +R + N L K
Sbjct 679 SKKWD-EKVVKQLREKRNQLNEK 700
> hsa:10592 SMC2, CAP-E, CAPE, FLJ10093, SMC2L1, hCAP-E; structural
maintenance of chromosomes 2; K06674 structural maintenance
of chromosome 2
Length=1197
Score = 39.3 bits (90), Expect = 0.003, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query 25 KVAEYAFGGGLICRSAAIAQKITYQKNCRLAFPTATAEGDVFQTGGIMAGGSVRDVRQTM 84
K E+ FG +C + A+K+ + K R+ T T GDVF G ++GG+ R ++
Sbjct 618 KAMEFVFGTTFVCDNMDNAKKVAFDK--RIMTRTVTLGGDVFDPHGTLSGGA-RSQAASI 674
Query 85 LT--WKVRQTARVIRIESNSL 103
LT +++ +RI+ N L
Sbjct 675 LTKFQELKDVQDELRIKENEL 695
> dre:321452 smc2, SMC2L1, fb92e05, wu:fb92e05, zeh1628, zgc:55326;
structural maintenance of chromosomes 2; K06674 structural
maintenance of chromosome 2
Length=1199
Score = 39.3 bits (90), Expect = 0.004, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query 25 KVAEYAFGGGLICRSAAIAQKITYQKNCRLAFPTATAEGDVFQTGGIMAGGS 76
K EY FG L+C S A+K+ + K ++ T T GDVF G + GG+
Sbjct 618 KAMEYVFGTTLVCDSLDNAKKVAFDKG--VSTKTVTLGGDVFDPQGTLTGGA 667
> dre:100334001 structural maintenance of chromosomes 2-like;
K06674 structural maintenance of chromosome 2
Length=1199
Score = 39.3 bits (90), Expect = 0.004, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query 25 KVAEYAFGGGLICRSAAIAQKITYQKNCRLAFPTATAEGDVFQTGGIMAGGS 76
K EY FG L+C S A+K+ + K ++ T T GDVF G + GG+
Sbjct 618 KAMEYVFGTTLVCDSLDNAKKVAFDKG--VSTKTVTLGGDVFDPQGTLTGGA 667
> mmu:14211 Smc2, 5730502P04Rik, AI255214, AW545314, CAP-E, CAPE,
Fin16, SMC-2, Smc2l1; structural maintenance of chromosomes
2; K06674 structural maintenance of chromosome 2
Length=1191
Score = 38.1 bits (87), Expect = 0.008, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query 25 KVAEYAFGGGLICRSAAIAQKITYQKNCRLAFPTATAEGDVFQTGGIMAGGSVRDVRQTM 84
K E+ FG +C + A+K+ + K R+ T T GDVF G ++GG+ R ++
Sbjct 618 KGMEFVFGTTFVCNNMDNAKKVAFDK--RIMTRTVTLGGDVFDPHGTLSGGA-RSQAASI 674
Query 85 LT--WKVRQTARVIRIESNSL 103
LT +V+ +R + N L
Sbjct 675 LTKFQEVKDVQDELRTKENEL 695
> cpv:cgd4_2200 SMC2 protein ; K06674 structural maintenance of
chromosome 2
Length=1236
Score = 37.7 bits (86), Expect = 0.009, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query 28 EYAFGGGLICRSAAIAQKITYQKNCRLAFPTATAEGDVFQTGGIMAGGSVRDVRQTMLT 86
++ FG +IC IA+ IT+ N + T T GD++ G ++GGS+ ++++L+
Sbjct 655 KFCFGHTIICEDENIAKMITF--NPGILARTVTLNGDIYDPSGTLSGGSIPSNQRSILS 711
> xla:380182 smc1a, MGC53133, smc1aa, smc1l1; structural maintenance
of chromosomes 1A; K06636 structural maintenance of chromosome
1
Length=1232
Score = 37.0 bits (84), Expect = 0.014, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query 17 RYDVRRHSKVAEYAFGGGLICRSAAIAQKITYQKNCRLAFPTATAEGDVFQTGGIMAGGS 76
RY+ K +YA G L+C + A++I + + R T +G +FQ G+++GG+
Sbjct 599 RYEPPHIKKALQYACGNALVCDNVEDARRIAFGGHQR--HKTVALDGTLFQKSGVISGGA 656
Query 77 VRDVRQTMLTW 87
D++ W
Sbjct 657 -SDLKAKARRW 666
> xla:100379087 smc1ab, SMC-1A, smc1, smc1a, smc1l1, xSMC1; structural
maintenance of chromosomes 1A b
Length=1232
Score = 37.0 bits (84), Expect = 0.014, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query 17 RYDVRRHSKVAEYAFGGGLICRSAAIAQKITYQKNCRLAFPTATAEGDVFQTGGIMAGGS 76
RY+ K +YA G L+C + A++I + + R T +G +FQ G+++GG+
Sbjct 599 RYEPPHIKKALQYACGNALVCDNVEDARRIAFGGHQR--HKTVALDGTLFQKSGVISGGA 656
Query 77 VRDVRQTMLTW 87
D++ W
Sbjct 657 -SDLKAKARRW 666
> mmu:24061 Smc1a, 5830426I24Rik, KIAA0178, SMC-1A, Sb1.8, Smc1,
Smc1alpha, Smc1l1, Smcb, mKIAA0178; structural maintenance
of chromosomes 1A; K06636 structural maintenance of chromosome
1
Length=1233
Score = 37.0 bits (84), Expect = 0.014, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query 17 RYDVRRHSKVAEYAFGGGLICRSAAIAQKITYQKNCRLAFPTATAEGDVFQTGGIMAGGS 76
RY+ K +YA G L+C + A++I + + R T +G +FQ G+++GG+
Sbjct 599 RYEPPHIKKALQYACGNALVCDNVEDARRIAFGGHQR--HKTVALDGTLFQKSGVISGGA 656
Query 77 VRDVRQTMLTW 87
D++ W
Sbjct 657 -SDLKAKARRW 666
> hsa:8243 SMC1A, CDLS2, DKFZp686L19178, DXS423E, KIAA0178, MGC138332,
SB1.8, SMC1, SMC1L1, SMC1alpha, SMCB; structural maintenance
of chromosomes 1A; K06636 structural maintenance of
chromosome 1
Length=1233
Score = 37.0 bits (84), Expect = 0.014, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query 17 RYDVRRHSKVAEYAFGGGLICRSAAIAQKITYQKNCRLAFPTATAEGDVFQTGGIMAGGS 76
RY+ K +YA G L+C + A++I + + R T +G +FQ G+++GG+
Sbjct 599 RYEPPHIKKALQYACGNALVCDNVEDARRIAFGGHQR--HKTVALDGTLFQKSGVISGGA 656
Query 77 VRDVRQTMLTW 87
D++ W
Sbjct 657 -SDLKAKARRW 666
> dre:559665 smc1a; structural maintenance of chromosomes 1A;
K06636 structural maintenance of chromosome 1
Length=1232
Score = 37.0 bits (84), Expect = 0.016, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query 17 RYDVRRHSKVAEYAFGGGLICRSAAIAQKITYQKNCRLAFPTATAEGDVFQTGGIMAGGS 76
RY+ K +YA G L+C + A++I + R T +G +FQ G+++GG+
Sbjct 599 RYEPPHIKKALQYACGNALVCENVEDARRIAFGGPYR--HKTVALDGTLFQKSGVISGGA 656
Query 77 VRDVRQTMLTW 87
D++ W
Sbjct 657 -SDLKAKARRW 666
> mmu:140557 Smc1b, SMC-1B, SMC1beta, Smc1l2; structural maintenance
of chromosomes 1B; K06636 structural maintenance of chromosome
1
Length=1248
Score = 33.1 bits (74), Expect = 0.20, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query 25 KVAEYAFGGGLICRSAAIAQKITYQKNCRLAFPTATAEGDVFQTGGIMAGGSVRDVRQTM 84
KV ++ G GL+C + A+ I + R +G +F G+++GGS D++
Sbjct 607 KVIQFVCGNGLVCETVEEARHIAFGGPERRK--AVALDGTLFLKSGVISGGS-SDLKHKA 663
Query 85 LTWKVRQ 91
L W ++
Sbjct 664 LCWDEKE 670
> xla:399092 smc3, Cspg6, xsmc3; structural maintenance of chromosomes
3; K06669 structural maintenance of chromosome 3 (chondroitin
sulfate proteoglycan 6)
Length=1217
Score = 32.3 bits (72), Expect = 0.36, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 18/108 (16%)
Query 17 RYDVRRHSKVAEYAFGGGLICRSAAIAQKI--TYQKNCRLAFPTATAEGDVFQTGGIMAG 74
RY++R K ++ FG LICRS ++ ++ + +C T EGD G + G
Sbjct 614 RYNLR-FDKAFKHVFGKTLICRSMEVSTQLARAFTMDC------ITLEGDQVSHRGALTG 666
Query 75 GSVRDVRQTMLTWKVRQTARVIRIESNSLFPKFRLYGAAEESLRLGTE 122
G D R++ L ++++ R + E ++L K E+LR E
Sbjct 667 G-YYDTRKSRL--ELQKDVRKVEDELHALEAKL------NENLRRNIE 705
> bbo:BBOV_IV005990 23.m06059; hypothetical protein
Length=86
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query 84 MLTWKVRQTARVIRIESNSLFPKFRLY--GAAEESLRLGTECG 124
ML +R+ +RV + S P FR Y AEE LRL ECG
Sbjct 4 MLQRLLREVSRVREVASTFSNPVFRNYFVSKAEEELRLLKECG 46
> hsa:27127 SMC1B, FLJ43748, SMC1BETA, SMC1L2, bK268H5, bK268H5.5;
structural maintenance of chromosomes 1B; K06636 structural
maintenance of chromosome 1
Length=1235
Score = 30.4 bits (67), Expect = 1.3, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query 25 KVAEYAFGGGLICRSAAIAQKITYQKNCRLAFPTATAEGDVFQTGGIMAGGSVRDVRQTM 84
KV ++ G GL+C + A+ I R T +G +F G+++GGS D++
Sbjct 607 KVIQFVCGNGLVCETMEEARHIALSGPERQK--TVALDGTLFLKSGVISGGS-SDLKYKA 663
Query 85 LTWKVRQ 91
W ++
Sbjct 664 RCWDEKE 670
> mmu:13006 Smc3, Bamacan, Cspg6, HCAP, Mmip1, SMC-3, SmcD; structural
maintenace of chromosomes 3; K06669 structural maintenance
of chromosome 3 (chondroitin sulfate proteoglycan 6)
Length=1217
Score = 30.0 bits (66), Expect = 1.8, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query 17 RYDVRRHSKVAEYAFGGGLICRSAAIAQKI--TYQKNCRLAFPTATAEGDVFQTGGIMAG 74
RY+ R K ++ FG LICRS ++ ++ + +C T EGD G + G
Sbjct 614 RYN-PRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDC------ITLEGDQVSHRGALTG 666
Query 75 GSVRDVRQTML 85
G D R++ L
Sbjct 667 G-YYDTRKSRL 676
> hsa:9126 SMC3, BAM, BMH, CDLS3, CSPG6, HCAP, SMC3L1; structural
maintenance of chromosomes 3; K06669 structural maintenance
of chromosome 3 (chondroitin sulfate proteoglycan 6)
Length=1217
Score = 30.0 bits (66), Expect = 1.8, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query 17 RYDVRRHSKVAEYAFGGGLICRSAAIAQKI--TYQKNCRLAFPTATAEGDVFQTGGIMAG 74
RY+ R K ++ FG LICRS ++ ++ + +C T EGD G + G
Sbjct 614 RYN-PRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDC------ITLEGDQVSHRGALTG 666
Query 75 GSVRDVRQTML 85
G D R++ L
Sbjct 667 G-YYDTRKSRL 676
> tpv:TP01_0677 ATP-specific succinyl-CoA synthetase beta subunit;
K01900 succinyl-CoA synthetase beta subunit [EC:6.2.1.4
6.2.1.5]
Length=453
Score = 29.3 bits (64), Expect = 3.3, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 0/49 (0%)
Query 32 GGGLICRSAAIAQKITYQKNCRLAFPTATAEGDVFQTGGIMAGGSVRDV 80
G GL+C +AQK++ + L+F G + GG+V ++
Sbjct 127 GKGLLCTEVLVAQKLSIKSERYLSFTLDRGSGGIVAIATKHGGGNVEEI 175
Lambda K H
0.325 0.136 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2044474180
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40