bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_2869_orf2
Length=173
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_044320 60S ribosomal protein L24, putative ; K02896... 150 2e-36
pfa:PF13_0049 60S ribosomal protein L24, putative; K02896 larg... 132 4e-31
tpv:TP03_0050 60S ribosomal protein L24; K02896 large subunit ... 130 3e-30
bbo:BBOV_III003570 17.m07336; ribosomal protein L24e; K02896 l... 125 5e-29
cpv:cgd4_840 60S ribosomal protein L24 ; K02896 large subunit ... 120 3e-27
dre:192301 rpl24, chunp6908, wu:fa93e03; ribosomal protein L24... 89.0 8e-18
xla:447081 rpl24, MGC85232; ribosomal protein L24; K02896 larg... 88.2 1e-17
mmu:68193 Rpl24, 0610008L05Rik, Bst; ribosomal protein L24; K0... 86.7 3e-17
hsa:6152 RPL24; ribosomal protein L24; K02896 large subunit ri... 86.7 3e-17
sce:YGL031C RPL24A, RPL30A; Rpl24ap; K02896 large subunit ribo... 85.5 7e-17
sce:YGR148C RPL24B, RPL30B; Rpl24bp; K02896 large subunit ribo... 85.5 8e-17
ath:AT3G53020 STV1; STV1 (SHORT VALVE1); structural constituen... 83.6 3e-16
ath:AT2G36620 RPL24A; RPL24A (ribosomal protein L24); structur... 83.2 4e-16
cel:D1007.12 rpl-24.1; Ribosomal Protein, Large subunit family... 63.2 4e-10
mmu:225215 Rsl24d1, 2410159K22Rik, MGC6735; ribosomal L24 doma... 47.0 3e-05
xla:379128 rsl24d1, MGC53444, rlp24, rpl24, rpl24l, rvas3; rib... 47.0 3e-05
hsa:51187 RSL24D1, C15orf15, HRP-L30-iso, L30, RLP24, RPL24, R... 47.0 3e-05
cel:C03D6.8 rpl-24.2; Ribosomal Protein, Large subunit family ... 46.6 5e-05
xla:444327 MGC81028 protein; K02896 large subunit ribosomal pr... 45.4 1e-04
ath:AT2G44860 60S ribosomal protein L24, putative; K02896 larg... 43.9 2e-04
dre:406266 rsl24d1, c15orf15, wu:fa94f12, wu:fa95d02, zgc:5620... 42.0 0.001
sce:YLR009W RLP24; Essential protein with similarity to Rpl24A... 41.6 0.001
tgo:TGME49_042680 60S ribosomal protein L24, putative ; K02896... 41.2 0.002
cpv:cgd7_5310 60S ribosomal protein L24 ; K02896 large subunit... 40.8 0.003
tpv:TP03_0223 60S ribosomal protein L24; K02896 large subunit ... 40.0 0.004
pfa:PFE0300c 60S ribosomal subunit protein L24-2, putative; K0... 38.1 0.017
bbo:BBOV_IV006880 23.m06126; 60S ribosomal protein L24; K02896... 37.7 0.019
hsa:284288 RSL24D1P11; ribosomal L24 domain containing 1 pseud... 28.9 8.3
hsa:219287 FAM123A, FLJ25477; family with sequence similarity ... 28.9 8.4
> tgo:TGME49_044320 60S ribosomal protein L24, putative ; K02896
large subunit ribosomal protein L24e
Length=291
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/113 (67%), Positives = 91/113 (80%), Gaps = 3/113 (2%)
Query 14 CAIDSRMAGVQTTIKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAA 73
C I +M+ V+TTIKT++CSFSEYRIYPGRG +FV++DGKVHT+IH KEA L RQK K
Sbjct 133 CTI--KMSAVKTTIKTDMCSFSEYRIYPGRGQRFVAKDGKVHTFIHRKEASLFRQKIKPV 190
Query 74 KLRWTLVWRRANKKSRGEAVAKRRTRKGGK-VQKAIVGISLEEIKQRRAAKPD 125
KL WTLVWRR NKK +AV KRR+RK K VQKAIVG+SLE+IK+ RA KP+
Sbjct 191 KLHWTLVWRRMNKKGGKDAVNKRRSRKATKTVQKAIVGLSLEDIKRTRAQKPE 243
> pfa:PF13_0049 60S ribosomal protein L24, putative; K02896 large
subunit ribosomal protein L24e
Length=162
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 81/102 (79%), Gaps = 0/102 (0%)
Query 20 MAGVQTTIKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTL 79
M+ ++TT+KTE CSFSEYRIYPGRG K+++RDGKV+ Y+ SK A L QKKKAAKLRWT
Sbjct 1 MSQIKTTVKTEACSFSEYRIYPGRGQKYIARDGKVYFYLSSKFASLALQKKKAAKLRWTQ 60
Query 80 VWRRANKKSRGEAVAKRRTRKGGKVQKAIVGISLEEIKQRRA 121
WRR NKK++ E +RR +K KVQKA+ G+++E+I+ R+A
Sbjct 61 TWRRNNKKTKIETTQRRRYKKTIKVQKAVCGLTVEDIRNRKA 102
> tpv:TP03_0050 60S ribosomal protein L24; K02896 large subunit
ribosomal protein L24e
Length=159
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 99/153 (64%), Gaps = 6/153 (3%)
Query 18 SRMAGVQTTIKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRW 77
SRM+ V TTIKTE C+F++YR+YPGRG KFV+RDGKV+ +I+ K A ++K K AKL+W
Sbjct 3 SRMSSVTTTIKTEHCNFTDYRVYPGRGKKFVARDGKVYFFINGKSAAFHKRKVKPAKLKW 62
Query 78 TLVWRRANKKSRGEAVAKRRTRKGGKVQKAIVGISLEEIKQRR--AAKPDPTKMRK---- 131
L WR+ANKK + E ++R++K + QKAIVG+SL+++K +R A KP P K
Sbjct 63 NLAWRKANKKFQTELFNRKRSKKTSRPQKAIVGLSLDDLKSKRSQATKPAPKLNVKQSLL 122
Query 132 MPAKDKKEKKEKPKQTVVPGTRAPPVKKMVPRA 164
M KDK + ++ P T V K + RA
Sbjct 123 MDTKDKNRRSFDNSKSHQPTTSKSNVPKKLQRA 155
> bbo:BBOV_III003570 17.m07336; ribosomal protein L24e; K02896
large subunit ribosomal protein L24e
Length=157
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 76/97 (78%), Gaps = 0/97 (0%)
Query 20 MAGVQTTIKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTL 79
MA V TTIKTELCSFS+YR+YPGRG KFV+RDGKV+ ++ SK A L +Q+ K AK++WT
Sbjct 1 MATVTTTIKTELCSFSDYRVYPGRGQKFVARDGKVYFFLSSKSASLHKQRVKPAKVKWTP 60
Query 80 VWRRANKKSRGEAVAKRRTRKGGKVQKAIVGISLEEI 116
WR+ANKK + E +RR++K + QKA +G+SLEE+
Sbjct 61 SWRKANKKFQTEVSGRRRSKKAARYQKAFLGLSLEEL 97
> cpv:cgd4_840 60S ribosomal protein L24 ; K02896 large subunit
ribosomal protein L24e
Length=133
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 93/130 (71%), Gaps = 2/130 (1%)
Query 20 MAGVQTTIKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTL 79
M+ V+TTIKT+LCS+SEYRIYPGRG KFV+RDG+V T+++ K A L QK + KL+W++
Sbjct 1 MSTVKTTIKTDLCSYSEYRIYPGRGRKFVARDGRVSTFLNQKCASLFHQKIRPVKLKWSV 60
Query 80 VWRRANKKSRGE-AVAKRRTRKGGKVQKAIVGISLEEIKQRRA-AKPDPTKMRKMPAKDK 137
WRR NKK + A +KRR +K ++ KAI G+SL++IKQ+RA + + +K +
Sbjct 61 GWRRMNKKLTNQGATSKRRNKKTVRLHKAIEGLSLDDIKQKRAQNQSNSGAAQKAALSEA 120
Query 138 KEKKEKPKQT 147
K +++K KQ+
Sbjct 121 KARQQKKKQS 130
> dre:192301 rpl24, chunp6908, wu:fa93e03; ribosomal protein L24;
K02896 large subunit ribosomal protein L24e
Length=157
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 69/108 (63%), Gaps = 0/108 (0%)
Query 27 IKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTLVWRRANK 86
+K ELCSFS Y+IYPG G ++ DGKV ++++K K+ ++ WT+++RR +K
Sbjct 1 MKVELCSFSGYKIYPGHGRRYARVDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query 87 KSRGEAVAKRRTRKGGKVQKAIVGISLEEIKQRRAAKPDPTKMRKMPA 134
K + E V+K+RTR+ K Q+AI G SL EI +R KP+ K ++ A
Sbjct 61 KGQSEEVSKKRTRRAVKFQRAITGASLAEILAKRNQKPEVRKAQREQA 108
> xla:447081 rpl24, MGC85232; ribosomal protein L24; K02896 large
subunit ribosomal protein L24e
Length=139
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 68/108 (62%), Gaps = 0/108 (0%)
Query 27 IKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTLVWRRANK 86
+K ELCSFS Y+IYPG G ++ DGKV ++++K K+ ++ WT+++RR +K
Sbjct 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query 87 KSRGEAVAKRRTRKGGKVQKAIVGISLEEIKQRRAAKPDPTKMRKMPA 134
K + E + K+RTR+ K Q+AI G SL EI +R KP+ K ++ A
Sbjct 61 KGQSEEIQKKRTRRAVKFQRAITGASLAEIMAKRNQKPEVRKAQREQA 108
> mmu:68193 Rpl24, 0610008L05Rik, Bst; ribosomal protein L24;
K02896 large subunit ribosomal protein L24e
Length=157
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 68/108 (62%), Gaps = 0/108 (0%)
Query 27 IKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTLVWRRANK 86
+K ELCSFS Y+IYPG G ++ DGKV ++++K K+ ++ WT+++RR +K
Sbjct 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query 87 KSRGEAVAKRRTRKGGKVQKAIVGISLEEIKQRRAAKPDPTKMRKMPA 134
K + E + K+RTR+ K Q+AI G SL +I +R KP+ K ++ A
Sbjct 61 KGQSEEIQKKRTRRAVKFQRAITGASLADIMAKRNQKPEVRKAQREQA 108
> hsa:6152 RPL24; ribosomal protein L24; K02896 large subunit
ribosomal protein L24e
Length=157
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 68/108 (62%), Gaps = 0/108 (0%)
Query 27 IKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTLVWRRANK 86
+K ELCSFS Y+IYPG G ++ DGKV ++++K K+ ++ WT+++RR +K
Sbjct 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query 87 KSRGEAVAKRRTRKGGKVQKAIVGISLEEIKQRRAAKPDPTKMRKMPA 134
K + E + K+RTR+ K Q+AI G SL +I +R KP+ K ++ A
Sbjct 61 KGQSEEIQKKRTRRAVKFQRAITGASLADIMAKRNQKPEVRKAQREQA 108
> sce:YGL031C RPL24A, RPL30A; Rpl24ap; K02896 large subunit ribosomal
protein L24e
Length=155
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 67/99 (67%), Gaps = 0/99 (0%)
Query 27 IKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTLVWRRANK 86
+K E+ SFS +IYPGRG FV D K+ + +SK A L +Q+K ++ WT+++R+ +K
Sbjct 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHK 60
Query 87 KSRGEAVAKRRTRKGGKVQKAIVGISLEEIKQRRAAKPD 125
K E VAK+R+RK K Q+ I G SL+ IK+RR+ KP+
Sbjct 61 KGITEEVAKKRSRKTVKAQRPITGASLDLIKERRSLKPE 99
> sce:YGR148C RPL24B, RPL30B; Rpl24bp; K02896 large subunit ribosomal
protein L24e
Length=155
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 67/99 (67%), Gaps = 0/99 (0%)
Query 27 IKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTLVWRRANK 86
+K E+ SFS +IYPGRG FV D K+ + +SK A L +Q+K ++ WT+++R+ +K
Sbjct 1 MKVEVDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHK 60
Query 87 KSRGEAVAKRRTRKGGKVQKAIVGISLEEIKQRRAAKPD 125
K E VAK+R+RK K Q+ I G SL+ IK+RR+ KP+
Sbjct 61 KGITEEVAKKRSRKTVKAQRPITGASLDLIKERRSLKPE 99
> ath:AT3G53020 STV1; STV1 (SHORT VALVE1); structural constituent
of ribosome; K02896 large subunit ribosomal protein L24e
Length=163
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Query 26 TIKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTLVWRRAN 85
+KTELC FS +IYPGRG++F+ D +V +++SK R K K +KL WT ++R+ +
Sbjct 2 VLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLAWTAMYRKQH 61
Query 86 KKSRGEAVAKRRTRKGGK-VQKAIVGISLEEIKQRRAAKPD 125
KK + KRR R K ++IVG +LE I+++RA KP+
Sbjct 62 KKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPE 102
> ath:AT2G36620 RPL24A; RPL24A (ribosomal protein L24); structural
constituent of ribosome; K02896 large subunit ribosomal
protein L24e
Length=164
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Query 26 TIKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTLVWRRAN 85
+KTELC FS +IYPGRG++F+ D +V +++SK R K K +KL WT ++R+ +
Sbjct 2 VLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQH 61
Query 86 KKSRGEAVAKRRTRKGGK-VQKAIVGISLEEIKQRRAAKPD 125
KK + KRR R K ++IVG +LE I+++RA KP+
Sbjct 62 KKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPE 102
> cel:D1007.12 rpl-24.1; Ribosomal Protein, Large subunit family
member (rpl-24.1); K02896 large subunit ribosomal protein
L24e
Length=159
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query 27 IKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTLVWRRANK 86
+K E C +S Y+I+PG G + V DGKV ++ K + + ++ +RWT+++R NK
Sbjct 1 MKVETCVYSGYKIHPGHGKRLVRTDGKVQIFLSGKALKGAKLRRNPRDIRWTVLYRIKNK 60
Query 87 K-SRG-EAVAKRRTRKGGK-VQKAIVGISLEEIKQRRAAKPD 125
K + G E V +++T+K + V +A+ G+SL+ I +R D
Sbjct 61 KGTHGQEQVTRKKTKKSVQVVNRAVAGLSLDAILAKRNQTED 102
> mmu:225215 Rsl24d1, 2410159K22Rik, MGC6735; ribosomal L24 domain
containing 1; K02896 large subunit ribosomal protein L24e
Length=163
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 10/138 (7%)
Query 27 IKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTLVWRRANK 86
++ E C F IYPG G+ FV D KV + SK + ++K+ K+RWT +R+A
Sbjct 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAG 60
Query 87 KS---RGEAVAKRRTRKGGKVQKAIVGISL------EEIKQRRAAKPDPTKMRKMPAKDK 137
K ++R + K Q+ + ++ EEIKQ+R AK +++K K
Sbjct 61 KELTVDNSFEFEKRRNEPVKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQK 120
Query 138 KEKKEKPKQTVVPGTRAP 155
+ ++ KQ + RAP
Sbjct 121 VQDIKEVKQN-IHLIRAP 137
> xla:379128 rsl24d1, MGC53444, rlp24, rpl24, rpl24l, rvas3; ribosomal
L24 domain containing 1; K02896 large subunit ribosomal
protein L24e
Length=163
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query 27 IKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTLVWRRANK 86
++ E C F IYPG G+ FV D KV + SK + ++K+ K+RWT +R++
Sbjct 1 MRVEKCYFCSAPIYPGHGMMFVRNDSKVFRFCRSKCHKNFKKKRNPRKIRWTKAFRKSAG 60
Query 87 KS---RGEAVAKRRTRKGGKVQKAIVGIS------LEEIKQRRAAKPDPTKMRK----MP 133
K ++R + K Q+ + S +EEIKQ+R A+ +++K
Sbjct 61 KELTVDNSFEFEKRRNEPVKYQRELWSKSVEAMKRVEEIKQKRQARFIMNRLKKGKELQK 120
Query 134 AKDKKEKKE 142
A+D KE K+
Sbjct 121 AQDIKEVKQ 129
> hsa:51187 RSL24D1, C15orf15, HRP-L30-iso, L30, RLP24, RPL24,
RPL24L, TVAS3; ribosomal L24 domain containing 1; K02896 large
subunit ribosomal protein L24e
Length=163
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 10/138 (7%)
Query 27 IKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTLVWRRANK 86
++ E C F IYPG G+ FV D KV + SK + ++K+ K+RWT +R+A
Sbjct 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAG 60
Query 87 KS---RGEAVAKRRTRKGGKVQKAIVGISL------EEIKQRRAAKPDPTKMRKMPAKDK 137
K ++R + K Q+ + ++ EEIKQ+R AK +++K K
Sbjct 61 KELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQK 120
Query 138 KEKKEKPKQTVVPGTRAP 155
+ ++ KQ + RAP
Sbjct 121 VQDIKEVKQN-IHLIRAP 137
> cel:C03D6.8 rpl-24.2; Ribosomal Protein, Large subunit family
member (rpl-24.2); K02896 large subunit ribosomal protein
L24e
Length=162
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 0/58 (0%)
Query 27 IKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTLVWRRA 84
++ E C F IYPG G++FV D V + S+ +L ++KK KLR+T RRA
Sbjct 1 MRIEKCYFCSSPIYPGHGIQFVRNDSTVFKFCRSRCNKLFKKKKNPRKLRFTKAARRA 58
> xla:444327 MGC81028 protein; K02896 large subunit ribosomal
protein L24e
Length=163
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 20/143 (13%)
Query 27 IKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTLVWRRANK 86
++ E C F IYPG G+ FV D K + SK + ++K+ KLRWT +R++
Sbjct 1 MRVEKCYFCSAPIYPGHGMMFVRNDCKAFRFCRSKCHKNFKKKRNPRKLRWTKAFRKSAG 60
Query 87 K----SRGEAVAKRRTRKGGKVQKAIVGIS------LEEIKQRRAAKPDPTKMRK----M 132
K KRR + K Q+ + + +EEIKQ+R A+ +++K
Sbjct 61 KELTVDNSFEFEKRRN-EPFKYQRQLWSKTVEAMKRVEEIKQKRQARFIMNRLKKGKELQ 119
Query 133 PAKDKKEKKEKPKQTVVPGTRAP 155
A+D KE K+ + RAP
Sbjct 120 KAQDIKEVKQN-----IHLIRAP 137
> ath:AT2G44860 60S ribosomal protein L24, putative; K02896 large
subunit ribosomal protein L24e
Length=159
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 0/62 (0%)
Query 27 IKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTLVWRRANK 86
++ E C F IYPG G++FV D K+ + SK + + K+ K++WT +R A+
Sbjct 1 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAFRAAHG 60
Query 87 KS 88
K
Sbjct 61 KD 62
> dre:406266 rsl24d1, c15orf15, wu:fa94f12, wu:fa95d02, zgc:56202;
ribosomal L24 domain containing 1; K02896 large subunit
ribosomal protein L24e
Length=161
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 0/58 (0%)
Query 27 IKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTLVWRRA 84
++ E C F +YPG G+ FV D KV + SK + ++K+ K RWT +R++
Sbjct 1 MRIEKCYFCSAPVYPGHGMMFVRNDCKVFRFCRSKCHKNFKKKRNPRKTRWTKAFRKS 58
> sce:YLR009W RLP24; Essential protein with similarity to Rpl24Ap
and Rpl24Bp, associated with pre-60S ribosomal subunits
and required for ribosomal large subunit biogenesis; K02896
large subunit ribosomal protein L24e
Length=199
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 11/115 (9%)
Query 32 CSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTLVWRRANKKSRG- 90
C F YPG G+ FV D K + SK + +Q++ KL+WT +R+A K
Sbjct 6 CHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAGKELAV 65
Query 91 ---EAVAKRRTRKGGKVQKAIVGISL------EEIKQRRAAKPDPTKMRKMPAKD 136
A+RR + + +V +L EEI+Q+R +MR KD
Sbjct 66 DSTLTFAQRRN-VPVRYNRELVATTLKAMARIEEIRQKRERAFYKNRMRGNKEKD 119
> tgo:TGME49_042680 60S ribosomal protein L24, putative ; K02896
large subunit ribosomal protein L24e
Length=196
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 0/58 (0%)
Query 27 IKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTLVWRRA 84
++ E C F IYPG G+ FV D K+ + SK + + K K +WT +R+A
Sbjct 1 MRIEKCWFCSSNIYPGHGVVFVRSDAKMFRFCRSKCHKHFKAKHNPRKFKWTKAYRKA 58
> cpv:cgd7_5310 60S ribosomal protein L24 ; K02896 large subunit
ribosomal protein L24e
Length=202
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query 26 TIKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTLVWRRAN 85
++ E C + IYPG G+ FV D K+ + SK R + K K +WT +A
Sbjct 5 NMRIEKCWYCSSNIYPGHGVTFVRNDAKIFRFCRSKCHRHFKMKHNPRKSKWT----KAY 60
Query 86 KKSRGEAV 93
+K+RG+ +
Sbjct 61 RKTRGKEM 68
> tpv:TP03_0223 60S ribosomal protein L24; K02896 large subunit
ribosomal protein L24e
Length=186
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query 32 CSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTLVWRRAN-KKSRG 90
C IYPG G+ FV D K+ + SK R + K K++WT +RR K+ R
Sbjct 6 CWLCSSNIYPGHGIVFVRNDSKIFRFCRSKCHRHFKAKHNPRKIKWTKAYRRLQGKELRN 65
Query 91 EAVAKRRTRKG 101
+ + RK
Sbjct 66 DENLEMELRKN 76
> pfa:PFE0300c 60S ribosomal subunit protein L24-2, putative;
K02896 large subunit ribosomal protein L24e
Length=204
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query 27 IKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTLVWRRANK 86
++ E C + IYPG G+ F+ D V + SK + + K K++WT ++R
Sbjct 1 MRIEKCWYCSGNIYPGHGIFFIRNDCNVFKFCRSKCHKHFKAKHNPRKVKWTKIYR---- 56
Query 87 KSRGEAVAKRRTRKGGKV 104
K R + ++ +T + K+
Sbjct 57 KERNKELSYDKTFEFEKI 74
> bbo:BBOV_IV006880 23.m06126; 60S ribosomal protein L24; K02896
large subunit ribosomal protein L24e
Length=192
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query 31 LCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTLVWRRANKKS 88
LCS + IYPG G+ FV D K+ + SK + + K KL+WT RR + K
Sbjct 8 LCSSN---IYPGHGIVFVRNDSKIFRFCRSKCHKHFKAKHNPRKLKWTKAARRMHGKE 62
> hsa:284288 RSL24D1P11; ribosomal L24 domain containing 1 pseudogene
11; K02896 large subunit ribosomal protein L24e
Length=187
Score = 28.9 bits (63), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 23/166 (13%)
Query 27 IKTELCSFSEYRIYPGRGLKFVSRDGKVHTYIHSKEARLGRQKKKAAKLRWTLVWRRA-- 84
++ E C F IYPG + F+ D KV + SK + ++K K+R T +++A
Sbjct 1 MRIEKCYFCSGPIYPGYDMLFIHNDCKVFGFCKSKCHKHFKKKCNPRKVRRTKPFQKAAG 60
Query 85 ----------NKKSRGEAVAKRRTRKGGKVQKAIVGIS-LEEIKQRRAAKPDPTKMRKMP 133
K R E + +R K I + +EEIKQ+ AK +++K
Sbjct 61 KELTVDNSFEFDKHRNELIKYQRELWN----KTIDAMKRVEEIKQKHQAKFIMNRLKKNK 116
Query 134 AKDKKEKKEKPKQTV------VPGTRAPPVKKMVPRAQKVAAARLM 173
K + ++ KQ++ + G +KMV + Q+ +++
Sbjct 117 ELQKVQDIKEVKQSIHLTQARLAGKGKELEEKMVQQLQQDVDMKML 162
> hsa:219287 FAM123A, FLJ25477; family with sequence similarity
123A
Length=671
Score = 28.9 bits (63), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query 49 SRDGKVHTYIHSKEARLGRQKKKAAKLRWTLVWRRANKKSRGEAVAKRRTRKGGKVQKAI 108
S +GK SK G+QK+ L + W R +K+++ EA A+ R GG +
Sbjct 173 SENGKGEPVDASKAG--GKQKRGLRGLFSGMRWHRKDKRAKAEA-AEGRAPGGGLILPGS 229
Query 109 VGISLEEIKQR--RAAKPDPTKMRKMPAKDKKEKKEKPKQTVVPGTRAP 155
+ SLE +K+ RAA+ +P + + +D + ++ P RAP
Sbjct 230 LTASLECVKEETPRAAR-EPEEPSQDAPRDPAGEPAGGEEVPAPADRAP 277
Lambda K H
0.317 0.131 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 4406352944
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40