bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_2867_orf1 Length=202 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_113390 60s ribosomal protein l6, putative ; K02934 ... 134 3e-31 ath:AT1G74050 60S ribosomal protein L6 (RPL6C); K02934 large s... 103 3e-22 ath:AT1G74060 60S ribosomal protein L6 (RPL6B); K02934 large s... 103 3e-22 ath:AT1G18540 60S ribosomal protein L6 (RPL6A); K02934 large s... 102 1e-21 cpv:cgd7_4460 60S ribosomal protein L6 ; K02934 large subunit ... 100 2e-21 sce:YML073C RPL6A, YL16A; Rpl6ap; K02934 large subunit ribosom... 99.0 9e-21 sce:YLR448W RPL6B; Rpl6bp; K02934 large subunit ribosomal prot... 98.6 1e-20 bbo:BBOV_II000880 18.m06062; ribosomal protein L6e; K02934 lar... 97.8 2e-20 mmu:19988 Rpl6, MGC117949, Taxreb107; ribosomal protein L6; K0... 95.9 9e-20 mmu:620213 Gm6136, EG620213; predicted pseudogene 6136 95.5 xla:444819 rpl6, MGC84358; ribosomal protein L6; K02934 large ... 95.5 1e-19 mmu:100046435 60S ribosomal protein L6-like 94.0 3e-19 hsa:6128 RPL6, SHUJUN-2, TAXREB107, TXREB1; ribosomal protein ... 90.9 2e-18 mmu:432502 Gm5428, EG432502; predicted gene 5428; K02934 large... 89.4 8e-18 tpv:TP04_0493 60S ribosomal protein L6e; K02934 large subunit ... 89.4 8e-18 cel:R151.3 rpl-6; Ribosomal Protein, Large subunit family memb... 87.4 3e-17 mmu:627889 Gm6807, EG627889; predicted gene 6807 86.3 dre:336727 rpl6, MGC111805, wu:fa93h05, wu:fb26a11, zgc:111805... 81.6 2e-15 pfa:PF13_0213 60S ribosomal protein L6-2, putative; K02934 lar... 63.2 7e-10 sce:YDR345C HXT3; Hxt3p; K08139 MFS transporter, SP family, su... 33.9 0.40 sce:YOR153W PDR5, LEM1, STS1, YDR1; Pdr5p; K08711 ATP-binding ... 30.8 3.0 cel:F55F10.1 hypothetical protein; K14572 midasin 30.4 4.5 ath:AT5G07290 AML4; AML4 (ARABIDOPSIS MEI2-LIKE 4); RNA bindin... 29.3 8.5 > tgo:TGME49_113390 60s ribosomal protein l6, putative ; K02934 large subunit ribosomal protein L6e Length=193 Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 72/120 (60%), Positives = 87/120 (72%), Gaps = 1/120 (0%) Query 28 AAAAAAAGARRFRLRRKNKRAIALKRQAQGRSSSKLRSSITPGTVLILLSSGFRGKRVVC 87 A AAA +R R RK KR + + +KLRSSITPGTVLILLS G RGKRVV Sbjct 2 APTAAALAKKRLR-TRKPKRQLYKSPAGAAKRMAKLRSSITPGTVLILLSGGHRGKRVVF 60 Query 88 LQQQQPSGLLLVTGPFAVNGVPLRRVNPRYVIATSSKINISEVDLSGVQQEMFVRSKQQE 147 L+Q PSGLLLVTGPF VNGVPLRRVN RYVIAT++K++IS VD+S ++ E F SK+++ Sbjct 61 LKQLAPSGLLLVTGPFKVNGVPLRRVNQRYVIATTTKVDISGVDVSSIKDEQFGASKKEK 120 > ath:AT1G74050 60S ribosomal protein L6 (RPL6C); K02934 large subunit ribosomal protein L6e Length=233 Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 1/80 (1%) Query 61 SKLRSSITPGTVLILLSSGFRGKRVVCLQQQQPSGLLLVTGPFAVNGVPLRRVNPRYVIA 120 +KLR+SITPGTVLI+L+ F+GKRVV L+Q SGLLLVTGPF +NGVPLRRVN YVI Sbjct 83 TKLRASITPGTVLIILAGRFKGKRVVFLKQLA-SGLLLVTGPFKINGVPLRRVNQAYVIG 141 Query 121 TSSKINISEVDLSGVQQEMF 140 TS+K++IS V L + F Sbjct 142 TSTKVDISGVTLDKFDDKYF 161 > ath:AT1G74060 60S ribosomal protein L6 (RPL6B); K02934 large subunit ribosomal protein L6e Length=233 Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 1/80 (1%) Query 61 SKLRSSITPGTVLILLSSGFRGKRVVCLQQQQPSGLLLVTGPFAVNGVPLRRVNPRYVIA 120 +KLR+SITPGTVLI+L+ F+GKRVV L+Q SGLLLVTGPF +NGVPLRRVN YVI Sbjct 83 AKLRASITPGTVLIILAGRFKGKRVVFLKQLA-SGLLLVTGPFKINGVPLRRVNQAYVIG 141 Query 121 TSSKINISEVDLSGVQQEMF 140 TS+K++IS V L + F Sbjct 142 TSTKVDISGVTLDKFDDKYF 161 > ath:AT1G18540 60S ribosomal protein L6 (RPL6A); K02934 large subunit ribosomal protein L6e Length=233 Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 1/80 (1%) Query 61 SKLRSSITPGTVLILLSSGFRGKRVVCLQQQQPSGLLLVTGPFAVNGVPLRRVNPRYVIA 120 +KL++SITPGTVLI+L+ F+GKRVV L+Q SGLLLVTGPF +NGVPLRRVN YVI Sbjct 83 TKLKASITPGTVLIILAGRFKGKRVVFLKQLS-SGLLLVTGPFKINGVPLRRVNQAYVIG 141 Query 121 TSSKINISEVDLSGVQQEMF 140 TS+KI+IS V+ + F Sbjct 142 TSTKIDISGVNTEKFDDKYF 161 > cpv:cgd7_4460 60S ribosomal protein L6 ; K02934 large subunit ribosomal protein L6e Length=184 Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 50/96 (52%), Positives = 71/96 (73%), Gaps = 3/96 (3%) Query 62 KLRSSITPGTVLILLSSGFRGKRVVCLQQQQPSGLLLVTGPFAVNGVPLRRVNPRYVIAT 121 KLRSS+ PG V ILL+ ++GKRVV L+ PSGL++VTGP+A+NGVP+RRVNP Y+IAT Sbjct 34 KLRSSLQPGVVCILLAGPYKGKRVVMLKAL-PSGLVVVTGPYALNGVPVRRVNPAYIIAT 92 Query 122 SSKINISEVDLSGVQQEMF--VRSKQQEARAAQAAQ 155 S+K+++S+ D+S E F RSK ++++ Q Sbjct 93 STKVDVSKADVSKFTDEYFKVDRSKLKKSKDTFMDQ 128 > sce:YML073C RPL6A, YL16A; Rpl6ap; K02934 large subunit ribosomal protein L6e Length=176 Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 49/91 (53%), Positives = 64/91 (70%), Gaps = 1/91 (1%) Query 50 ALKRQAQGRSSSKLRSSITPGTVLILLSSGFRGKRVVCLQQQQPSGLLLVTGPFAVNGVP 109 ALK+ + KLR+S+ PGTVLILL+ FRGKRVV L+ + LL++GPF VNGVP Sbjct 17 ALKKTRKAARPQKLRASLVPGTVLILLAGRFRGKRVVYLKHLE-DNTLLISGPFKVNGVP 75 Query 110 LRRVNPRYVIATSSKINISEVDLSGVQQEMF 140 LRRVN RYVIATS+K+++ V++ E F Sbjct 76 LRRVNARYVIATSTKVSVEGVNVEKFNVEYF 106 > sce:YLR448W RPL6B; Rpl6bp; K02934 large subunit ribosomal protein L6e Length=176 Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 48/79 (60%), Positives = 59/79 (74%), Gaps = 1/79 (1%) Query 62 KLRSSITPGTVLILLSSGFRGKRVVCLQQQQPSGLLLVTGPFAVNGVPLRRVNPRYVIAT 121 KLR+S+ PGTVLILL+ FRGKRVV L+ + LLVTGPF VNGVPLRRVN RYVIAT Sbjct 29 KLRASLVPGTVLILLAGRFRGKRVVYLKHLE-DNTLLVTGPFKVNGVPLRRVNARYVIAT 87 Query 122 SSKINISEVDLSGVQQEMF 140 S+K+++ V++ E F Sbjct 88 STKVSVEGVNVEKFNVEYF 106 > bbo:BBOV_II000880 18.m06062; ribosomal protein L6e; K02934 large subunit ribosomal protein L6e Length=197 Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 45/64 (70%), Positives = 53/64 (82%), Gaps = 0/64 (0%) Query 62 KLRSSITPGTVLILLSSGFRGKRVVCLQQQQPSGLLLVTGPFAVNGVPLRRVNPRYVIAT 121 K+R S+ PGTVLILLS ++GKRVV L+ + SGLLLVTGPF NGVPLRRVNPRYVIAT Sbjct 25 KIRPSLVPGTVLILLSGSYKGKRVVLLKVFKESGLLLVTGPFLFNGVPLRRVNPRYVIAT 84 Query 122 SSKI 125 S+ + Sbjct 85 STNV 88 > mmu:19988 Rpl6, MGC117949, Taxreb107; ribosomal protein L6; K02934 large subunit ribosomal protein L6e Length=296 Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 47/84 (55%), Positives = 63/84 (75%), Gaps = 1/84 (1%) Query 62 KLRSSITPGTVLILLSSGFRGKRVVCLQQQQPSGLLLVTGPFAVNGVPLRRVNPRYVIAT 121 +LRSSITPGTVLI+L+ RGKRVV L+Q SGLLLVTGP +N VPLRR + ++VIAT Sbjct 147 RLRSSITPGTVLIILTGRHRGKRVVFLKQLD-SGLLLVTGPLVINRVPLRRTHQKFVIAT 205 Query 122 SSKINISEVDLSGVQQEMFVRSKQ 145 S+K++IS+V + + + + KQ Sbjct 206 STKVDISDVKIPKHLTDAYFKKKQ 229 > mmu:620213 Gm6136, EG620213; predicted pseudogene 6136 Length=296 Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 47/84 (55%), Positives = 63/84 (75%), Gaps = 1/84 (1%) Query 62 KLRSSITPGTVLILLSSGFRGKRVVCLQQQQPSGLLLVTGPFAVNGVPLRRVNPRYVIAT 121 +LRSSITPGTVLI+L+ RGKRVV L+Q SGLLLVTGP +N VPLRR + ++VIAT Sbjct 147 RLRSSITPGTVLIILTGRHRGKRVVFLKQLD-SGLLLVTGPLVINRVPLRRTHQKFVIAT 205 Query 122 SSKINISEVDLSGVQQEMFVRSKQ 145 S+K++IS+V + + + + KQ Sbjct 206 STKVDISDVKIPKHLTDAYFKKKQ 229 > xla:444819 rpl6, MGC84358; ribosomal protein L6; K02934 large subunit ribosomal protein L6e Length=258 Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 47/71 (66%), Positives = 59/71 (83%), Gaps = 1/71 (1%) Query 62 KLRSSITPGTVLILLSSGFRGKRVVCLQQQQPSGLLLVTGPFAVNGVPLRRVNPRYVIAT 121 KLRSSITPGTVLILL+ RGKRVV L+Q P+GLLLVTGP A+N +PLRR + ++VIAT Sbjct 109 KLRSSITPGTVLILLNGRHRGKRVVFLKQL-PTGLLLVTGPLAINRIPLRRAHQKFVIAT 167 Query 122 SSKINISEVDL 132 S+K++IS V + Sbjct 168 STKVDISTVKI 178 > mmu:100046435 60S ribosomal protein L6-like Length=187 Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 47/84 (55%), Positives = 63/84 (75%), Gaps = 1/84 (1%) Query 62 KLRSSITPGTVLILLSSGFRGKRVVCLQQQQPSGLLLVTGPFAVNGVPLRRVNPRYVIAT 121 +LRSSITPGTVLI+L+ RGKRVV L+Q SGLLLVTGP +N VPLRR + ++VIAT Sbjct 38 RLRSSITPGTVLIILTGRHRGKRVVFLKQLD-SGLLLVTGPLVINRVPLRRTHQKFVIAT 96 Query 122 SSKINISEVDLSGVQQEMFVRSKQ 145 S+K++IS+V + + + + KQ Sbjct 97 STKVDISDVKIPKHLTDAYFKKKQ 120 > hsa:6128 RPL6, SHUJUN-2, TAXREB107, TXREB1; ribosomal protein L6; K02934 large subunit ribosomal protein L6e Length=288 Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 46/84 (54%), Positives = 62/84 (73%), Gaps = 1/84 (1%) Query 62 KLRSSITPGTVLILLSSGFRGKRVVCLQQQQPSGLLLVTGPFAVNGVPLRRVNPRYVIAT 121 KLR+SITPGT+LI+L+ RGKRVV L+Q SGLLLVTGP +N VPLRR + ++VIAT Sbjct 139 KLRASITPGTILIILTGRHRGKRVVFLKQLA-SGLLLVTGPLVLNRVPLRRTHQKFVIAT 197 Query 122 SSKINISEVDLSGVQQEMFVRSKQ 145 S+KI+IS V + + + + K+ Sbjct 198 STKIDISNVKIPKHLTDAYFKKKK 221 > mmu:432502 Gm5428, EG432502; predicted gene 5428; K02934 large subunit ribosomal protein L6e Length=309 Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 44/84 (52%), Positives = 62/84 (73%), Gaps = 1/84 (1%) Query 62 KLRSSITPGTVLILLSSGFRGKRVVCLQQQQPSGLLLVTGPFAVNGVPLRRVNPRYVIAT 121 +LRSSITP T+LI+L+ RGKRVV ++Q SGLLLVTGP +N VPLRR + ++VIAT Sbjct 147 RLRSSITPRTLLIILAGRHRGKRVVFVKQLD-SGLLLVTGPLVINRVPLRRTHQKFVIAT 205 Query 122 SSKINISEVDLSGVQQEMFVRSKQ 145 S+K++IS+V + + + + KQ Sbjct 206 STKVDISDVKIPKHLTDAYFKKKQ 229 > tpv:TP04_0493 60S ribosomal protein L6e; K02934 large subunit ribosomal protein L6e Length=212 Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 52/111 (46%), Positives = 69/111 (62%), Gaps = 16/111 (14%) Query 52 KRQAQGR---SSSKLRSSITPGTVLILLSSGFRGKRVVCLQQQQPSGLLLVTGPFAVNGV 108 K + GR S K+R S+ PG VLILL+ ++GKRVV L+ + SGLLLVTGPF+ NGV Sbjct 26 KTKVVGRKYASVPKVRESLKPGAVLILLTGSYKGKRVVLLKVLK-SGLLLVTGPFSFNGV 84 Query 109 PLRRVNPRYVIATSSKI-NISEVD-----------LSGVQQEMFVRSKQQE 147 PLRRVN RYVIATS+ + E D +S + E F ++K+ + Sbjct 85 PLRRVNSRYVIATSTNVYEFPEYDGSSLKSSVERAVSDLTDESFGKTKETK 135 > cel:R151.3 rpl-6; Ribosomal Protein, Large subunit family member (rpl-6); K02934 large subunit ribosomal protein L6e Length=217 Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 44/81 (54%), Positives = 57/81 (70%), Gaps = 1/81 (1%) Query 63 LRSSITPGTVLILLSSGFRGKRVVCLQQQQPSGLLLVTGPFAVNGVPLRRVNPRYVIATS 122 LR ++TPGTVLI+L+ +GKRVV L+Q SGLLLVTGP +NG PLRR+ +VIATS Sbjct 67 LRKTLTPGTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGPHKINGFPLRRIGQAFVIATS 126 Query 123 SKINISEVDL-SGVQQEMFVR 142 K+N+S V + + E F R Sbjct 127 LKVNVSGVKIPEHINDEYFKR 147 > mmu:627889 Gm6807, EG627889; predicted gene 6807 Length=295 Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 44/88 (50%), Positives = 63/88 (71%), Gaps = 1/88 (1%) Query 62 KLRSSITPGTVLILLSSGFRGKRVVCLQQQQPSGLLLVTGPFAVNGVPLRRVNPRYVIAT 121 +LRSSITP T+LI+L+ RGKRVV L+Q SGLLLVTGP +N VPLRR + ++VIAT Sbjct 147 RLRSSITPRTLLIILAGRHRGKRVVFLKQLD-SGLLLVTGPLVINRVPLRRTHQKFVIAT 205 Query 122 SSKINISEVDLSGVQQEMFVRSKQQEAR 149 S+K+ IS+V + + + + + ++ R Sbjct 206 STKVGISDVKIPKHLTDAYFKKQLRKPR 233 > dre:336727 rpl6, MGC111805, wu:fa93h05, wu:fb26a11, zgc:111805; ribosomal protein L6; K02934 large subunit ribosomal protein L6e Length=265 Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 41/67 (61%), Positives = 53/67 (79%), Gaps = 1/67 (1%) Query 62 KLRSSITPGTVLILLSSGFRGKRVVCLQQQQPSGLLLVTGPFAVNGVPLRRVNPRYVIAT 121 KLR +IT GTVLI+L+ RGKRVV L+Q SGLLLVTGP A+N VPLRR + ++ IAT Sbjct 116 KLRKTITLGTVLIMLTGRHRGKRVVFLKQLD-SGLLLVTGPLAINRVPLRRAHQKFCIAT 174 Query 122 SSKINIS 128 ++K++IS Sbjct 175 NTKVDIS 181 > pfa:PF13_0213 60S ribosomal protein L6-2, putative; K02934 large subunit ribosomal protein L6e Length=221 Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%) Query 62 KLRSSITPGTVLILLSSGFRGKRVVCLQQQQPSGLLLVTGPFAVNGVPLRRVNPRYVIAT 121 KLR SI G V I+L+ GKR + + + SGLL V GP+ +NGVPL+RV+ RY++ T Sbjct 49 KLRKSIEVGKVAIILTGKHMGKRCI-ITKILNSGLLAVVGPYEINGVPLKRVDSRYLVVT 107 Query 122 SSKI 125 S+ I Sbjct 108 STNI 111 > sce:YDR345C HXT3; Hxt3p; K08139 MFS transporter, SP family, sugar:H+ symporter Length=567 Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 10/84 (11%) Query 88 LQQQQPSGLLLVTGPFAVNGVPLRRVNPRYVI---------ATSSKINISEVDLSGVQQE 138 +Q + P GL F + G+ +PRY++ A+ SK+N D +QQE Sbjct 230 VQWRVPLGLCFAWALFMIGGMTFVPESPRYLVEAGQIDEARASLSKVNKVAPDHPFIQQE 289 Query 139 M-FVRSKQQEARAAQAAQQRRHFA 161 + + + +EARAA +A F Sbjct 290 LEVIEASVEEARAAGSASWGELFT 313 > sce:YOR153W PDR5, LEM1, STS1, YDR1; Pdr5p; K08711 ATP-binding cassette, subfamily G (WHITE), member 2, PDR Length=1511 Score = 30.8 bits (68), Expect = 3.0, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query 67 ITPGTVLILLSSGFRGKRVV--CLQQQQPSGLLLVTGPFAVNGVPLRRVNPRYV 118 + PGT+ L+ + GK + CL ++ G+ +TG VNG+P + PR + Sbjct 895 VKPGTLTALMGASGAGKTTLLDCLAERVTMGV--ITGDILVNGIPRDKSFPRSI 946 > cel:F55F10.1 hypothetical protein; K14572 midasin Length=4368 Score = 30.4 bits (67), Expect = 4.5, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 0/57 (0%) Query 74 ILLSSGFRGKRVVCLQQQQPSGLLLVTGPFAVNGVPLRRVNPRYVIATSSKINISEV 130 + + + FR K V + P + + G + G L +P+YVI + K N+SE+ Sbjct 681 VKIQAAFRFKVGVMPVPKHPENYVKIGGYYVEKGTQLTESDPKYVITKTVKGNLSEI 737 > ath:AT5G07290 AML4; AML4 (ARABIDOPSIS MEI2-LIKE 4); RNA binding / nucleic acid binding / nucleotide binding Length=907 Score = 29.3 bits (64), Expect = 8.5, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 0/40 (0%) Query 89 QQQQPSGLLLVTGPFAVNGVPLRRVNPRYVIATSSKINIS 128 Q Q SG++ P VNGVP +R+ P + +S + ++ Sbjct 557 QHNQSSGMMWPNSPSRVNGVPSQRIPPVTAFSRASPLMVN 596 Lambda K H 0.318 0.127 0.348 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 6124680020 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40