bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_2805_orf1
Length=156
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_060260 60S acidic ribosomal protein P1, putative ; ... 105 4e-23
cpv:cgd5_2370 60S acidic ribosomal protein LP1 like protein of... 102 4e-22
pfa:PF11_0043 60S ribosomal protein P1, putative; K02942 large... 87.4 1e-17
bbo:BBOV_III008120 17.m07710; 60S acidic ribosomal protein p1;... 83.6 2e-16
ath:AT5G24510 60s acidic ribosomal protein P1, putative; K0294... 82.8 4e-16
ath:AT1G01100 60S acidic ribosomal protein P1 (RPP1A) 77.8 1e-14
ath:AT4G00810 60S acidic ribosomal protein P1 (RPP1B) 77.0 2e-14
ath:AT5G47700 60S acidic ribosomal protein P1 (RPP1C); K02942 ... 77.0 2e-14
tpv:TP04_0711 60S acidic ribosomal protein P1; K02942 large su... 77.0 2e-14
cel:Y37E3.7 rla-1; Ribosomal protein, Large subunit, Acidic (P... 59.7 4e-09
mmu:635756 Gm7166; predicted gene 7166 58.2
mmu:270362 60S acidic ribosomal protein P1-like 56.6 3e-08
mmu:56040 Rplp1, 2410042H16Rik, Arpp1, C430017H15Rik, MGC10313... 56.2 4e-08
mmu:665298 Gm11942, OTTMUSG00000004999; predicted gene 11942 55.5
hsa:6176 RPLP1, FLJ27448, MGC5215, P1, RPP1; ribosomal protein... 55.1 1e-07
mmu:384081 Gm13249, OTTMUSG00000011077; predicted gene 13249 54.7
mmu:666574 Gm13144, OTTMUSG00000010663; predicted gene 13144 53.9
mmu:100502641 60S acidic ribosomal protein P1-like 53.9 2e-07
mmu:279067 Gm13777, OTTMUSG00000014339; predicted gene 13777 53.1
xla:399029 rplp1, MGC68562; ribosomal protein, large, P1; K029... 52.8 4e-07
mmu:100042734 Gm10073; predicted pseudogene 10073 52.8
mmu:666445 Gm13035, OTTMUSG00000010106; predicted gene 13035 52.4
dre:336719 rplp1, MGC77776, fa93f02, wu:fa93f02, zgc:77776; ri... 51.6 1e-06
xla:734491 hypothetical protein MGC114621; K02942 large subuni... 51.2 1e-06
sce:YDL081C RPP1A, RPLA1; Ribosomal stalk protein P1 alpha, in... 49.7 4e-06
sce:YDL130W RPP1B, RPL44', RPLA3; Rpp1bp; K02942 large subunit... 48.5 9e-06
mmu:195576 Gm13229, OTTMUSG00000011032; predicted gene 13229 48.1
mmu:666498 Gm13149, OTTMUSG00000010668; predicted gene 13149 45.8
cel:Y62E10A.1 rla-2; Ribosomal protein, Large subunit, Acidic ... 45.1 1e-04
tgo:TGME49_119860 DNA polymerase epsilon catalytic subunit, pu... 31.6 1.1
ath:AT3G44590 60S acidic ribosomal protein P2 (RPP2D); K02943 ... 30.4 2.2
xla:379826 rplp0, MGC53408, arbp; ribosomal protein, large, P0... 30.4 2.2
ath:AT3G49460 60S acidic ribosomal protein-related 30.4 2.4
> tgo:TGME49_060260 60S acidic ribosomal protein P1, putative
; K02942 large subunit ribosomal protein LP1
Length=179
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 63/74 (85%), Gaps = 0/74 (0%)
Query 33 AKMAAVPTSSLPDGQRQELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFA 92
+ MAAV TS+LP+ Q+QELLCTYA+LILSD+ M+++AENI+KLV A+G +VE YMP LFA
Sbjct 60 STMAAVATSALPEAQKQELLCTYAALILSDDKMDVTAENIQKLVVASGNTVEPYMPTLFA 119
Query 93 RALKGHNITDLLAG 106
RAL+G NI DL++
Sbjct 120 RALQGQNIADLISN 133
> cpv:cgd5_2370 60S acidic ribosomal protein LP1 like protein
of possible plant origin ; K02942 large subunit ribosomal protein
LP1
Length=122
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 85/122 (69%), Gaps = 0/122 (0%)
Query 35 MAAVPTSSLPDGQRQELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARA 94
MAAV + LP Q QEL+C+YA+L+LSD G+ +++ENI+K++SAAG SVE Y PGLFA+A
Sbjct 1 MAAVSMNELPQSQVQELICSYAALVLSDGGVPVTSENIKKIISAAGGSVEPYFPGLFAQA 60
Query 95 LKGHNITDLLAGAGTVAAAPAAAPAAAPAAAADNAADKGGKPAKQEEPEEEEDADMGFSL 154
L N++D++AG G + A A A AA D+ A K++E EEEE+ D+GFSL
Sbjct 61 LSTTNVSDIVAGCGAASVAVPVAGGAGAGAAQDSGASAAADDKKKKEEEEEEEGDLGFSL 120
Query 155 FD 156
FD
Sbjct 121 FD 122
> pfa:PF11_0043 60S ribosomal protein P1, putative; K02942 large
subunit ribosomal protein LP1
Length=118
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query 35 MAAVPTSSLPDGQRQELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARA 94
MA++P S LP+ ++QELLCTYA+LIL +E M I+++NI KL+ + +V Y+P LF RA
Sbjct 1 MASIPASELPECEKQELLCTYAALILHEEKMSITSDNILKLIKNSNNTVLPYLPMLFERA 60
Query 95 LKGHNITDLLAGAGTVAAAPAAA 117
LKG +I LL+ +V +APAAA
Sbjct 61 LKGKDIQSLLSNL-SVGSAPAAA 82
> bbo:BBOV_III008120 17.m07710; 60S acidic ribosomal protein p1;
K02942 large subunit ribosomal protein LP1
Length=118
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 52/69 (75%), Gaps = 0/69 (0%)
Query 35 MAAVPTSSLPDGQRQELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARA 94
M++VP S+L QR ELLC Y+SLIL DEG++ISAENI KL+ A +V+ + P LFA+A
Sbjct 1 MSSVPMSALSAEQRDELLCIYSSLILYDEGLDISAENITKLIKAVDINVQPFRPMLFAKA 60
Query 95 LKGHNITDL 103
L+G NI +L
Sbjct 61 LQGKNIAEL 69
> ath:AT5G24510 60s acidic ribosomal protein P1, putative; K02942
large subunit ribosomal protein LP1
Length=111
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 60/107 (56%), Gaps = 0/107 (0%)
Query 50 ELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARALKGHNITDLLAGAGT 109
EL CTYA+LIL D+G+EI+AENI KLV A +VESY P LFA+ + NI DL+ G
Sbjct 5 ELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIMNVGA 64
Query 110 VAAAPAAAPAAAPAAAADNAADKGGKPAKQEEPEEEEDADMGFSLFD 156
A A A+ + + K + E +EE + DM LFD
Sbjct 65 GGCGVARPVTTAAPTASQSVSIPEEKKNEMEVIKEESEDDMIIGLFD 111
> ath:AT1G01100 60S acidic ribosomal protein P1 (RPP1A)
Length=96
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 59/107 (55%), Gaps = 16/107 (14%)
Query 50 ELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARALKGHNITDLLAGAGT 109
EL C+YA +IL DEG+ I+A+ I LV AAG S+ESY P LFA+ + N+TDL+ G
Sbjct 6 ELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLIMNVGA 65
Query 110 VAAAPAAAPAAAPAAAADNAADKGGKPAKQEEPEEEEDADMGFSLFD 156
A A + K++EP EE D D+GF LFD
Sbjct 66 GGGGAAPAA----------------EEKKKDEPAEESDGDLGFGLFD 96
> ath:AT4G00810 60S acidic ribosomal protein P1 (RPP1B)
Length=113
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Query 50 ELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARALKGHNITDLLAGA-G 108
EL C+YA +IL DEG+ I+++ I LV AAG +ESY P LFA+ + N+TDL+
Sbjct 6 ELACSYAVMILEDEGIAITSDKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLIMNVGA 65
Query 109 TVAAAPAAAPAAAPAAAADNAADKGGKPAKQEEPEEEEDADMGFSLFD 156
A AAAPAAA AA K K++EP EE D D+GF LFD
Sbjct 66 GGGGGGAPVSAAAPAAAGGAAAAAPAKEEKKDEPAEESDGDLGFGLFD 113
> ath:AT5G47700 60S acidic ribosomal protein P1 (RPP1C); K02942
large subunit ribosomal protein LP1
Length=113
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Query 50 ELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARALKGHNITDLLAG-AG 108
EL C+YA +IL DEG+ I+A+ I LV AAG ++ESY P LFA+ + N+TDL+
Sbjct 6 ELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLIMNVGA 65
Query 109 TVAAAPAAAPAAAPAAAADNAADKGGKPAKQEEPEEEEDADMGFSLFD 156
A AA A AA + K++EP EE D D+GF LFD
Sbjct 66 GGGGGAPVAAAAPAAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113
> tpv:TP04_0711 60S acidic ribosomal protein P1; K02942 large
subunit ribosomal protein LP1
Length=117
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 50/70 (71%), Gaps = 0/70 (0%)
Query 35 MAAVPTSSLPDGQRQELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARA 94
M+ VP S L QR+EL+C Y+SL+L D+G++++ +NI KLV AA ++ + P LFARA
Sbjct 1 MSTVPVSELTKEQREELMCVYSSLVLYDDGLDVTQDNILKLVKAAKGDMQPFTPMLFARA 60
Query 95 LKGHNITDLL 104
LKG ++ LL
Sbjct 61 LKGKDLGSLL 70
> cel:Y37E3.7 rla-1; Ribosomal protein, Large subunit, Acidic
(P1) family member (rla-1); K02942 large subunit ribosomal protein
LP1
Length=111
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Query 48 RQELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARALKGHNITDLLAGA 107
QEL C YA+LIL D+ + I+ E I L+ AA E Y PGLFA+AL+G ++ +L+
Sbjct 4 NQELACVYAALILQDDEVAITGEKIATLLKAANVEFEPYWPGLFAKALEGVDVKNLITSV 63
Query 108 GTVAAAPAAAPAAAPAAAADNAADKGGKPAKQEEPEEEEDADMGFSLFD 156
+ A + A AAA A AA AA K+E EE +D DMGF LFD
Sbjct 64 SSGAGSGPAPAAAAAAPAAGGAAPAAETKKKEEPKEESDD-DMGFGLFD 111
> mmu:635756 Gm7166; predicted gene 7166
Length=135
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query 53 CTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARALKGHNITDLLAG--AGTV 110
C Y LIL D+ +++ + I L+ A +VES+ PGLF +AL I + AG
Sbjct 30 CIYFVLILHDQEVKVMKDEINALIKDADFNVESFWPGLFPKALANIKIERFICHLGAGAP 89
Query 111 AAAPAAAPAAAPAAAADNA-ADKGGKPAKQEEPEEEEDADMGFSLFD 156
+A A PA +P ++ N ++ AK EEP+E D D+GF +FD
Sbjct 90 GSAAGAMPAGSPDSSTTNVPVEERKVEAKNEEPKESVD-DIGFGIFD 135
> mmu:270362 60S acidic ribosomal protein P1-like
Length=111
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query 49 QELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARALKGHNITDLLAGAG 108
EL C Y++LIL D + + I L+ AAG S+E + PG FA+AL N L+ G
Sbjct 5 SELACIYSALILEDNEVMVMEVKINALIKAAGVSIEPFWPGSFAKALANVNTGSLICNVG 64
Query 109 TVAAAPAA--APAAAPA 123
T AP A AP+ PA
Sbjct 65 TGGPAPLAGGAPSGGPA 81
> mmu:56040 Rplp1, 2410042H16Rik, Arpp1, C430017H15Rik, MGC103133;
ribosomal protein, large, P1; K02942 large subunit ribosomal
protein LP1
Length=114
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 0/59 (0%)
Query 49 QELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARALKGHNITDLLAGA 107
EL C Y++LIL D+ + ++ + I L+ AAG SVE + PGLFA+AL NI L+
Sbjct 5 SELACIYSALILHDDEVTVTEDKINALIKAAGVSVEPFWPGLFAKALANVNIGSLICNV 63
> mmu:665298 Gm11942, OTTMUSG00000004999; predicted gene 11942
Length=114
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 0/59 (0%)
Query 49 QELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARALKGHNITDLLAGA 107
EL C Y++LIL D+ + ++ + I L+ AAG SVE + PGLFA+AL NI L+
Sbjct 5 SELACIYSALILHDDEVTVTEDKINALIKAAGVSVEPFWPGLFAKALANVNIGCLICNV 63
> hsa:6176 RPLP1, FLJ27448, MGC5215, P1, RPP1; ribosomal protein,
large, P1; K02942 large subunit ribosomal protein LP1
Length=114
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 0/59 (0%)
Query 49 QELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARALKGHNITDLLAGA 107
EL C Y++LIL D+ + ++ + I L+ AAG +VE + PGLFA+AL NI L+
Sbjct 5 SELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNV 63
> mmu:384081 Gm13249, OTTMUSG00000011077; predicted gene 13249
Length=114
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query 49 QELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARALKGHNITDLLAGAG 108
EL C Y++LIL D + + I L+ AAG S+E + PG FA+AL N L+ G
Sbjct 5 SELACIYSALILQDNKVMVMDVKINALIKAAGVSIEPFWPGSFAKALANVNTGSLICNVG 64
Query 109 TVAAAPAAAPAAAPA 123
AA P A AAP+
Sbjct 65 --AAEPTPAAGAAPS 77
> mmu:666574 Gm13144, OTTMUSG00000010663; predicted gene 13144
Length=114
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query 49 QELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARALKGHNITDLLAGAG 108
+L C Y++LIL D+ + ++ I L+ AAG S+E + PG FA+AL N L+ G
Sbjct 5 SKLTCIYSALILQDKEVMVTEVKINALIKAAGVSIEPFWPGSFAKALANVNTGSLICNVG 64
Query 109 TVAAAP--AAAPAAAPAAAADNAADKGGKPAKQEEPEEEEDADMGFSLFD 156
P AAP+ PA + A + K ++E EE + D GF LFD
Sbjct 65 AAGPTPPAGAAPSGGPAPSTAAAPAEEKKVEAKKEEPEESEDDRGFGLFD 114
> mmu:100502641 60S acidic ribosomal protein P1-like
Length=114
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 0/59 (0%)
Query 49 QELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARALKGHNITDLLAGA 107
EL C Y++LIL D+ + ++ + I L+ AAG SVE + PG FA+AL NI L+
Sbjct 5 SELACIYSTLILHDDEVTVTEDKISALIKAAGVSVEPFWPGSFAKALANVNIGSLICNV 63
> mmu:279067 Gm13777, OTTMUSG00000014339; predicted gene 13777
Length=114
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query 54 TYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARALKGHNITDLLAGAG----T 109
Y++LIL D+ + ++ + I L+ +AG SVE + PGLFA+AL NI L+ G
Sbjct 10 IYSALILHDDELTVTEDKINALIKSAGVSVEPFWPGLFAKALANVNIRSLICNVGANGLV 69
Query 110 VAAAPAAAPAAAPAAAADNAADKGGKPAKQEEPEEEEDADMGFSLFD 156
AA A A P+ AA A +K + K+E E E+ DMGF LFD
Sbjct 70 PAAGAAPAGGPTPSTAAAPAEEKKVEAKKEESEEPED--DMGFGLFD 114
> xla:399029 rplp1, MGC68562; ribosomal protein, large, P1; K02942
large subunit ribosomal protein LP1
Length=113
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 0/59 (0%)
Query 49 QELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARALKGHNITDLLAGA 107
EL C Y++LIL D+ + I+ + I L+ AG +VE + P LFA+AL NI L++
Sbjct 5 SELACIYSALILHDDEVSITEDKISTLIKTAGVTVEPFWPSLFAKALANINIGSLISNV 63
> mmu:100042734 Gm10073; predicted pseudogene 10073
Length=114
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 0/57 (0%)
Query 49 QELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARALKGHNITDLLA 105
EL C Y++LIL + + ++ + I L+ AAG SVE + PGLFA+AL NI L+
Sbjct 5 SELACIYSALILHGDEVTVTEDKINALIKAAGVSVEPFWPGLFAKALANVNIGSLIC 61
> mmu:666445 Gm13035, OTTMUSG00000010106; predicted gene 13035
Length=114
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query 49 QELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARALKGHNITDLLAGAG 108
EL C Y++LIL D + ++ I L+ AAG S+E + PG FA+AL N L+
Sbjct 5 SELACIYSALILQDNKVIVTEVKINALIKAAGVSIEPFWPGSFAKALANVNTGSLICNVE 64
Query 109 TVAAAPAAAPAAAPA 123
AA P A AAP+
Sbjct 65 --AAEPTPAAGAAPS 77
> dre:336719 rplp1, MGC77776, fa93f02, wu:fa93f02, zgc:77776;
ribosomal protein, large, P1; K02942 large subunit ribosomal
protein LP1
Length=113
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 0/59 (0%)
Query 49 QELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARALKGHNITDLLAGA 107
EL C Y++LIL D+ + ++ + + L+ AAG ++E + PGLFA+AL +I L+
Sbjct 5 SELACIYSALILHDDEVTVTEDKLNALIKAAGVTIEPFWPGLFAKALASVDIGSLICNV 63
> xla:734491 hypothetical protein MGC114621; K02942 large subunit
ribosomal protein LP1
Length=113
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Query 50 ELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARALKGHNITDLLAGAGT 109
EL C Y++LIL D+ + I+ + I L+ AG +VE + P LFA+AL +I L++ G
Sbjct 6 ELACIYSALILHDDEVSITEDKISTLIKTAGVTVEPFWPSLFAKALANIDIGSLISNVGA 65
Query 110 VAAAPAAAPAAAPAAAADNAAD-KGGKPAKQEEPEEEEDADMGFSLFD 156
APAA AA AA+A AA + K +++E EE D DMGF LFD
Sbjct 66 GGGAPAAGGAAPAAASAGGAAQVEEKKVEEKKEESEESDDDMGFGLFD 113
> sce:YDL081C RPP1A, RPLA1; Ribosomal stalk protein P1 alpha,
involved in the interaction between translational elongation
factors and the ribosome; accumulation of P1 in the cytoplasm
is regulated by phosphorylation and interaction with the
P2 stalk component; K02942 large subunit ribosomal protein LP1
Length=106
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 0/54 (0%)
Query 53 CTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARALKGHNITDLLAG 106
+YA+LIL+D +EIS+E + L +AA VE+ +FA+AL G N+ DLL
Sbjct 7 LSYAALILADSEIEISSEKLLTLTNAANVPVENIWADIFAKALDGQNLKDLLVN 60
> sce:YDL130W RPP1B, RPL44', RPLA3; Rpp1bp; K02942 large subunit
ribosomal protein LP1
Length=106
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 42/55 (76%), Gaps = 0/55 (0%)
Query 52 LCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARALKGHNITDLLAG 106
+ ++A+ IL+D G+EI+++N+ + AAGA+V++ ++A+AL+G ++ ++L+G
Sbjct 5 IISFAAFILADAGLEITSDNLLTITKAAGANVDNVWADVYAKALEGKDLKEILSG 59
> mmu:195576 Gm13229, OTTMUSG00000011032; predicted gene 13229
Length=119
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 0/57 (0%)
Query 49 QELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARALKGHNITDLLA 105
EL C Y++LIL D + ++ I L+ AAG S+E + PGL A+AL N L+
Sbjct 5 SELTCIYSALILQDNEVMVTEVKINALIKAAGVSIEPFWPGLSAKALANVNTGSLIC 61
> mmu:666498 Gm13149, OTTMUSG00000010668; predicted gene 13149
Length=119
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 0/57 (0%)
Query 49 QELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGLFARALKGHNITDLLA 105
EL C Y++LIL + + ++ I L+ AAG S+E + PG FA+AL N L+
Sbjct 5 SELACMYSALILQNNEVMVTEVKINALIKAAGVSIEPFWPGSFAKALANVNTGSLIC 61
> cel:Y62E10A.1 rla-2; Ribosomal protein, Large subunit, Acidic
(P1) family member (rla-2); K02943 large subunit ribosomal
protein LP2
Length=110
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query 69 AENIEKLVSAAGASVESYMPGLFARALKGHNITDLLA--GAGTVAAAPAAAPAAAPAAAA 126
++++ ++SA G ++ L L G + +L+A AG V+ + AAPAAA A AA
Sbjct 20 VDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSAGLVSVSGGAAPAAAAAPAA 79
Query 127 DNAADK-GGKPAKQEEPEEEEDADMGFSLFD 156
AA KPAK+EEP+EE D DMGF LFD
Sbjct 80 GGAAPAADSKPAKKEEPKEESDDDMGFGLFD 110
> tgo:TGME49_119860 DNA polymerase epsilon catalytic subunit,
putative (EC:2.7.11.12 2.7.7.7); K02324 DNA polymerase epsilon
subunit 1 [EC:2.7.7.7]
Length=3124
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 0/32 (0%)
Query 118 PAAAPAAAADNAADKGGKPAKQEEPEEEEDAD 149
P P AA + +GG+ AKQ E E+E+D D
Sbjct 2447 PVDGPGVAASESRRQGGRQAKQSEEEDEKDYD 2478
> ath:AT3G44590 60S acidic ribosomal protein P2 (RPP2D); K02943
large subunit ribosomal protein LP2
Length=111
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query 68 SAENIEKLVSAAGASVESYMPGLFARALKGHNITDLLA-GAGTVAAAPAAAPAAA---PA 123
SA+NI+ ++ A GA V+ L + + G +I +L+A G +A+ P+ A P+
Sbjct 19 SADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGREKLASVPSGGGVAVSAAPS 78
Query 124 AAADNAADKGGKPAKQEEPEEEEDADMGFSLFD 156
+ AA K ++E +EE D DMGFSLF+
Sbjct 79 SGGGGAAAPAEKKEAKKEEKEESDDDMGFSLFE 111
> xla:379826 rplp0, MGC53408, arbp; ribosomal protein, large,
P0; K02941 large subunit ribosomal protein LP0
Length=315
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/22 (68%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query 135 KPAKQEEPEEEEDADMGFSLFD 156
K KQEE EE +D DMGF LFD
Sbjct 295 KDEKQEESEESDD-DMGFGLFD 315
> ath:AT3G49460 60S acidic ribosomal protein-related
Length=46
Score = 30.4 bits (67), Expect = 2.4, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
Query 50 ELLCTYASLILSDEGMEISAENIEKLVSAAGASVESYMPGL 90
EL CTYA+L+L D + LV A ++ESY P L
Sbjct 5 ELACTYAALLLHDH------VTMSTLVKTANLNIESYWPSL 39
Lambda K H
0.313 0.130 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 3451799900
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40