bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_2573_orf1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_062670 60S ribosomal protein L18a, putative ; K0288... 197 1e-50
tpv:TP02_0803 60S ribosomal protein L18; K02882 large subunit ... 149 3e-36
xla:779107 rpl18a, MGC64263; ribosomal protein L18a; K02882 la... 149 7e-36
hsa:6142 RPL18A; ribosomal protein L18a; K02882 large subunit ... 147 2e-35
mmu:100041686 Gm15427, OTTMUSG00000021609; predicted pseudogen... 145 6e-35
mmu:76808 Rpl18a, 2510019J09Rik; ribosomal protein L18A; K0288... 145 7e-35
dre:394035 rpl18a, MGC56546, rpl-20Co, zgc:56546; ribosomal pr... 145 9e-35
sce:YOR312C RPL20B, RPL18A1; L20B; L18B; K02882 large subunit ... 143 4e-34
sce:YMR242C RPL20A, RPL18A2; L20A; L18A; K02882 large subunit ... 143 4e-34
mmu:669021 60S ribosomal protein L18a-like 142 5e-34
ath:AT1G29965 60S ribosomal protein L18A (RPL18aA) 140 3e-33
ath:AT1G29970 RPL18AA (60S RIBOSOMAL PROTEIN L18A-1); structur... 139 6e-33
ath:AT2G34480 60S ribosomal protein L18A (RPL18aB); K02882 lar... 139 6e-33
bbo:BBOV_III004630 17.m07414; 60S ribosomal protein L18ae; K02... 134 1e-31
ath:AT3G14600 60S ribosomal protein L18A (RPL18aC); K02882 lar... 132 6e-31
mmu:233075 Gm4883, EG233075; predicted gene 4883 132 6e-31
pfa:PF13_0224 60S ribosomal protein L18, putative; K02882 larg... 132 9e-31
cpv:cgd7_320 60S ribosomal protein L18A ; K02882 large subunit... 130 2e-30
cel:E04A4.8 rpl-20; Ribosomal Protein, Large subunit family me... 130 3e-30
cel:Y59A8B.6 hypothetical protein; K12855 pre-mRNA-processing ... 34.7 0.19
dre:336260 MGC110077, fj59h09, wu:fj59h09; zgc:110077 31.2 2.0
mmu:16769 Dsg4, CDHF13, MGC124398, lah; desmoglein 4; K07599 d... 30.4 3.7
cel:Y73C8B.3 hypothetical protein 28.9 8.9
bbo:BBOV_IV004260 23.m06088; bromodomain containing protein 28.9 9.2
> tgo:TGME49_062670 60S ribosomal protein L18a, putative ; K02882
large subunit ribosomal protein L18Ae
Length=183
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/156 (62%), Positives = 124/156 (79%), Gaps = 4/156 (2%)
Query 25 MKADKTLQQPIRQFQVVGRQRPAAAAAAAAAATPAYRLRLFAANEVLAVSRFWYLLRQLR 84
MKAD TLQQ I Q+QVVGR++P A + +R+RLFA N+VLAVS+FWYLL++++
Sbjct 1 MKADPTLQQKISQYQVVGRKQPTEAEPNPSL----FRMRLFARNKVLAVSKFWYLLKKMK 56
Query 85 KIKRAHGEVLEVVEINPKRATNPKNFGVWLRYDSRTGSHNMYKEVRDISENAAAAQVLAE 144
K+K++ GE+L V EI KR T KNFGVWLRYDSRTG+HNMYKEVRDIS+N A +Q+ AE
Sbjct 57 KVKKSTGEILAVNEIREKRPTFVKNFGVWLRYDSRTGTHNMYKEVRDISQNGAVSQLYAE 116
Query 145 MAGRHRALASNIQIIRIVQLKGSECRRPHVQQMLSS 180
MAGRHRAL SNIQIIR+ ++K S+CRR H+QQ+ S
Sbjct 117 MAGRHRALPSNIQIIRVAEIKASQCRRAHMQQLFDS 152
> tpv:TP02_0803 60S ribosomal protein L18; K02882 large subunit
ribosomal protein L18Ae
Length=191
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 96/148 (64%), Gaps = 4/148 (2%)
Query 30 TLQQPIRQFQVVGRQRPAAAAAAAAAATPAYRLRLFAANEVLAVSRFWYLLRQLRKIKRA 89
+L Q + Q+ +VGR AA YR+ +FA N VLA SRFWY +++L K KR+
Sbjct 15 SLGQNLVQYHIVGR----AAPTKKNPNPNTYRMSVFAKNSVLAKSRFWYFMKRLNKAKRS 70
Query 90 HGEVLEVVEINPKRATNPKNFGVWLRYDSRTGSHNMYKEVRDISENAAAAQVLAEMAGRH 149
GE+L +N + KNFGV LRY SRTG+HNMYKE RD++ A +Q+ +MAGRH
Sbjct 71 GGEILACNRLNEPKKGQVKNFGVLLRYKSRTGTHNMYKEYRDLTRTGAVSQMYGDMAGRH 130
Query 150 RALASNIQIIRIVQLKGSECRRPHVQQM 177
RA AS IQIIR+ ++ S+C++P V QM
Sbjct 131 RARASCIQIIRVAEISDSDCKKPKVTQM 158
> xla:779107 rpl18a, MGC64263; ribosomal protein L18a; K02882
large subunit ribosomal protein L18Ae
Length=176
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 101/156 (64%), Gaps = 8/156 (5%)
Query 25 MKADKTLQQPIRQFQVVGRQRPAAAAAAAAAATPAYRLRLFAANEVLAVSRFWYLLRQLR 84
MKA TL R+++V+GR P A + P YR+R+FA N V+A SRFWY + QL+
Sbjct 1 MKASGTL----REYKVIGRSLPTPKAPSP----PLYRMRIFAPNHVVAKSRFWYFVSQLK 52
Query 85 KIKRAHGEVLEVVEINPKRATNPKNFGVWLRYDSRTGSHNMYKEVRDISENAAAAQVLAE 144
K+K+A GE++ ++ K KNFG+WLRYDSR+G+HNMY+E RD++ AA Q +
Sbjct 53 KMKKASGEIVYCGQVFEKTPLKVKNFGIWLRYDSRSGTHNMYREYRDLTTAAAVTQCYRD 112
Query 145 MAGRHRALASNIQIIRIVQLKGSECRRPHVQQMLSS 180
M RHRA A IQI+++ + S+CRRP ++Q S
Sbjct 113 MGARHRARAHAIQIMKVEVIPASKCRRPAIKQFHDS 148
> hsa:6142 RPL18A; ribosomal protein L18a; K02882 large subunit
ribosomal protein L18Ae
Length=176
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 100/156 (64%), Gaps = 8/156 (5%)
Query 25 MKADKTLQQPIRQFQVVGRQRPAAAAAAAAAATPAYRLRLFAANEVLAVSRFWYLLRQLR 84
MKA TL R+++VVGR P P YR+R+FA N V+A SRFWY + QL+
Sbjct 1 MKASGTL----REYKVVGRCLPTPKCHTP----PLYRMRIFAPNHVVAKSRFWYFVSQLK 52
Query 85 KIKRAHGEVLEVVEINPKRATNPKNFGVWLRYDSRTGSHNMYKEVRDISENAAAAQVLAE 144
K+K++ GE++ ++ K KNFG+WLRYDSR+G+HNMY+E RD++ A Q +
Sbjct 53 KMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRD 112
Query 145 MAGRHRALASNIQIIRIVQLKGSECRRPHVQQMLSS 180
M RHRA A +IQI+++ ++ S+CRRP V+Q S
Sbjct 113 MGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDS 148
> mmu:100041686 Gm15427, OTTMUSG00000021609; predicted pseudogene
15427; K02882 large subunit ribosomal protein L18Ae
Length=191
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 99/156 (63%), Gaps = 8/156 (5%)
Query 25 MKADKTLQQPIRQFQVVGRQRPAAAAAAAAAATPAYRLRLFAANEVLAVSRFWYLLRQLR 84
MKA TL R+++VVGR P P YR+R+FA N V+A SRFWY + QL+
Sbjct 16 MKASGTL----REYKVVGRCLPTPKCHTP----PLYRMRIFAPNHVVAKSRFWYFVSQLK 67
Query 85 KIKRAHGEVLEVVEINPKRATNPKNFGVWLRYDSRTGSHNMYKEVRDISENAAAAQVLAE 144
K+K++ GE++ ++ K KNFG+WLRYDSR+G+HNMY+E RD++ A Q +
Sbjct 68 KMKKSSGEIVYCRQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRD 127
Query 145 MAGRHRALASNIQIIRIVQLKGSECRRPHVQQMLSS 180
M RHRA A +IQI+++ ++ +CRRP V+Q S
Sbjct 128 MGARHRARAHSIQIMKVEEIAAGKCRRPAVKQFHDS 163
> mmu:76808 Rpl18a, 2510019J09Rik; ribosomal protein L18A; K02882
large subunit ribosomal protein L18Ae
Length=176
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 99/156 (63%), Gaps = 8/156 (5%)
Query 25 MKADKTLQQPIRQFQVVGRQRPAAAAAAAAAATPAYRLRLFAANEVLAVSRFWYLLRQLR 84
MKA TL R+++VVGR P P YR+R+FA N V+A SRFWY + QL+
Sbjct 1 MKASGTL----REYKVVGRCLPTPKCHTP----PLYRMRIFAPNHVVAKSRFWYFVSQLK 52
Query 85 KIKRAHGEVLEVVEINPKRATNPKNFGVWLRYDSRTGSHNMYKEVRDISENAAAAQVLAE 144
K+K++ GE++ ++ K KNFG+WLRYDSR+G+HNMY+E RD++ A Q +
Sbjct 53 KMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRD 112
Query 145 MAGRHRALASNIQIIRIVQLKGSECRRPHVQQMLSS 180
M RHRA A +IQI+++ ++ +CRRP V+Q S
Sbjct 113 MGARHRARAHSIQIMKVEEIAAGKCRRPAVKQFHDS 148
> dre:394035 rpl18a, MGC56546, rpl-20Co, zgc:56546; ribosomal
protein L18a; K02882 large subunit ribosomal protein L18Ae
Length=176
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 100/156 (64%), Gaps = 8/156 (5%)
Query 25 MKADKTLQQPIRQFQVVGRQRPAAAAAAAAAATPAYRLRLFAANEVLAVSRFWYLLRQLR 84
MKA TL R+++VVGR P+ A P YR+R+FA N V+A SRFWY + QLR
Sbjct 1 MKASGTL----REYKVVGRLLPSVKNPAP----PLYRMRIFAPNHVVAKSRFWYFVSQLR 52
Query 85 KIKRAHGEVLEVVEINPKRATNPKNFGVWLRYDSRTGSHNMYKEVRDISENAAAAQVLAE 144
K+K+A GE++ + K KNFG+WLRYDSR+G+HNMY+E RD++ + A Q +
Sbjct 53 KMKKASGEIVYCGLVFEKSPLKVKNFGIWLRYDSRSGTHNMYREYRDLTTSGAVTQCYRD 112
Query 145 MAGRHRALASNIQIIRIVQLKGSECRRPHVQQMLSS 180
M RHRA A IQI+++ + ++CRRP ++Q S
Sbjct 113 MGARHRARAHAIQIMKVQVIAANKCRRPAIKQFHDS 148
> sce:YOR312C RPL20B, RPL18A1; L20B; L18B; K02882 large subunit
ribosomal protein L18Ae
Length=172
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 102/146 (69%), Gaps = 5/146 (3%)
Query 35 IRQFQVVGRQRPAAAAAAAAAATPAYRLRLFAANEVLAVSRFWYLLRQLRKIKRAHGEVL 94
+++QV+GR+ P + +R+R+FA+NEV+A SR+WY L++L K+K+A GE++
Sbjct 4 FKEYQVIGRRLPTESVPEPKL----FRMRIFASNEVIAKSRYWYFLQKLHKVKKASGEIV 59
Query 95 EVVEINPKRATNPKNFGVWLRYDSRTGSHNMYKEVRDISENAAAAQVLAEMAGRHRALAS 154
+ +IN T KNFGVW+RYDSR+G+HNMYKE+RD+S AA + +MA RHRA
Sbjct 60 SINQINEAHPTKVKNFGVWVRYDSRSGTHNMYKEIRDVSRVAAVETLYQDMAARHRARFR 119
Query 155 NIQIIRIVQL-KGSECRRPHVQQMLS 179
+I I+++ ++ K ++ +R +V+Q L+
Sbjct 120 SIHILKVAEIEKTADVKRQYVKQFLT 145
> sce:YMR242C RPL20A, RPL18A2; L20A; L18A; K02882 large subunit
ribosomal protein L18Ae
Length=172
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 102/146 (69%), Gaps = 5/146 (3%)
Query 35 IRQFQVVGRQRPAAAAAAAAAATPAYRLRLFAANEVLAVSRFWYLLRQLRKIKRAHGEVL 94
+++QV+GR+ P + +R+R+FA+NEV+A SR+WY L++L K+K+A GE++
Sbjct 4 FKEYQVIGRRLPTESVPEPKL----FRMRIFASNEVIAKSRYWYFLQKLHKVKKASGEIV 59
Query 95 EVVEINPKRATNPKNFGVWLRYDSRTGSHNMYKEVRDISENAAAAQVLAEMAGRHRALAS 154
+ +IN T KNFGVW+RYDSR+G+HNMYKE+RD+S AA + +MA RHRA
Sbjct 60 SINQINEAHPTKVKNFGVWVRYDSRSGTHNMYKEIRDVSRVAAVETLYQDMAARHRARFR 119
Query 155 NIQIIRIVQL-KGSECRRPHVQQMLS 179
+I I+++ ++ K ++ +R +V+Q L+
Sbjct 120 SIHILKVAEIEKTADVKRQYVKQFLT 145
> mmu:669021 60S ribosomal protein L18a-like
Length=217
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 98/156 (62%), Gaps = 8/156 (5%)
Query 25 MKADKTLQQPIRQFQVVGRQRPAAAAAAAAAATPAYRLRLFAANEVLAVSRFWYLLRQLR 84
MKA TL R+++VVGR P P YR+R+FA N V+A SRFWY + QL+
Sbjct 42 MKASGTL----REYKVVGRCLPTPKCHTP----PLYRMRIFAPNHVVAKSRFWYFVSQLK 93
Query 85 KIKRAHGEVLEVVEINPKRATNPKNFGVWLRYDSRTGSHNMYKEVRDISENAAAAQVLAE 144
K+K++ GE++ ++ K KNFG+WLRYDSR+G+HNMY+E RD++ A Q +
Sbjct 94 KMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYLD 153
Query 145 MAGRHRALASNIQIIRIVQLKGSECRRPHVQQMLSS 180
M RHRA A +IQI+++ ++ +CRR V+Q S
Sbjct 154 MGARHRARAHSIQIMKVEEIAAGKCRRTAVKQFHDS 189
> ath:AT1G29965 60S ribosomal protein L18A (RPL18aA)
Length=178
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 91/146 (62%), Gaps = 4/146 (2%)
Query 35 IRQFQVVGRQRPAAAAAAAAAATPAYRLRLFAANEVLAVSRFWYLLRQLRKIKRAHGEVL 94
+ Q+QVVGR P YR++L+A NEVLA S+FWY LR+ +K+K+++G++L
Sbjct 6 LHQYQVVGRALPTEKDEQPKI----YRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQML 61
Query 95 EVVEINPKRATNPKNFGVWLRYDSRTGSHNMYKEVRDISENAAAAQVLAEMAGRHRALAS 154
+ EI K T KNFG+WLRY SRTG HNMYKE RD + N A Q+ EMA RHR
Sbjct 62 AINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFP 121
Query 155 NIQIIRIVQLKGSECRRPHVQQMLSS 180
IQII+ + S C+R +Q +S
Sbjct 122 CIQIIKTATVPASLCKRESTKQFHNS 147
> ath:AT1G29970 RPL18AA (60S RIBOSOMAL PROTEIN L18A-1); structural
constituent of ribosome
Length=312
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 91/146 (62%), Gaps = 4/146 (2%)
Query 35 IRQFQVVGRQRPAAAAAAAAAATPAYRLRLFAANEVLAVSRFWYLLRQLRKIKRAHGEVL 94
+ Q+QVVGR P YR++L+A NEVLA S+FWY LR+ +K+K+++G++L
Sbjct 140 LHQYQVVGRALPTEKDEQPKI----YRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQML 195
Query 95 EVVEINPKRATNPKNFGVWLRYDSRTGSHNMYKEVRDISENAAAAQVLAEMAGRHRALAS 154
+ EI K T KNFG+WLRY SRTG HNMYKE RD + N A Q+ EMA RHR
Sbjct 196 AINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFP 255
Query 155 NIQIIRIVQLKGSECRRPHVQQMLSS 180
IQII+ + S C+R +Q +S
Sbjct 256 CIQIIKTATVPASLCKRESTKQFHNS 281
> ath:AT2G34480 60S ribosomal protein L18A (RPL18aB); K02882 large
subunit ribosomal protein L18Ae
Length=178
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 4/146 (2%)
Query 35 IRQFQVVGRQRPAAAAAAAAAATPAYRLRLFAANEVLAVSRFWYLLRQLRKIKRAHGEVL 94
Q+QVVGR P YR++L+A NEV A S+FWY LR+L+K+K+++G++L
Sbjct 6 FHQYQVVGRALPTEKDVQPKI----YRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQML 61
Query 95 EVVEINPKRATNPKNFGVWLRYDSRTGSHNMYKEVRDISENAAAAQVLAEMAGRHRALAS 154
+ EI K T KNFG+WLRY SRTG HNMYKE RD + N A Q+ EMA RHR
Sbjct 62 AINEIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFP 121
Query 155 NIQIIRIVQLKGSECRRPHVQQMLSS 180
IQII+ + C+R +Q +S
Sbjct 122 CIQIIKTATVPAKLCKRESTKQFHNS 147
> bbo:BBOV_III004630 17.m07414; 60S ribosomal protein L18ae; K02882
large subunit ribosomal protein L18Ae
Length=188
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 93/149 (62%), Gaps = 6/149 (4%)
Query 30 TLQQPIRQFQVVGRQRPAAAAAAAAAATP-AYRLRLFAANEVLAVSRFWYLLRQLRKIKR 88
+L+Q + + VVGR AA + P YR+ +FA N VLA RFWY +R+L+K KR
Sbjct 12 SLKQNLTHYHVVGR-----AAPSKKNPNPLIYRMNIFAKNSVLAKGRFWYFMRKLQKAKR 66
Query 89 AHGEVLEVVEINPKRATNPKNFGVWLRYDSRTGSHNMYKEVRDISENAAAAQVLAEMAGR 148
+ GE+L +N + T KN+GV LRY+ RTG+HNMYKE RD + A +Q+ EMAGR
Sbjct 67 SGGEILACNVLNEVKPTQAKNYGVLLRYECRTGTHNMYKEYRDTTLTGAISQMYGEMAGR 126
Query 149 HRALASNIQIIRIVQLKGSECRRPHVQQM 177
A AS IQIIR Q+ ++CRR Q+
Sbjct 127 DHARASCIQIIRARQIADADCRRTRTTQL 155
> ath:AT3G14600 60S ribosomal protein L18A (RPL18aC); K02882 large
subunit ribosomal protein L18Ae
Length=178
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 4/146 (2%)
Query 35 IRQFQVVGRQRPAAAAAAAAAATPAYRLRLFAANEVLAVSRFWYLLRQLRKIKRAHGEVL 94
Q+QVVGR P YR++L+ NEV A S+FWY +R+L+K+K+++G++L
Sbjct 6 FHQYQVVGRALPTENDEHPKI----YRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQML 61
Query 95 EVVEINPKRATNPKNFGVWLRYDSRTGSHNMYKEVRDISENAAAAQVLAEMAGRHRALAS 154
+ EI K T KN+G+WLRY SRTG HNMYKE RD + N Q+ EMA RHR
Sbjct 62 AINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFP 121
Query 155 NIQIIRIVQLKGSECRRPHVQQMLSS 180
IQII+ + C+R +Q +S
Sbjct 122 CIQIIKTATVPAKLCKREITKQFHNS 147
> mmu:233075 Gm4883, EG233075; predicted gene 4883
Length=175
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 92/155 (59%), Gaps = 8/155 (5%)
Query 25 MKADKTLQQPIRQFQVVGRQRPAAAAAAAAAATPAYRLRLFAANEVLAVSRFWYLLRQLR 84
MKA TL + +VVGR PA P YR+R+FA N V+A S FWY + QL+
Sbjct 1 MKASGTLWE----CKVVGRCLPAPTCHTP----PLYRMRIFAPNHVVAKSHFWYFVLQLK 52
Query 85 KIKRAHGEVLEVVEINPKRATNPKNFGVWLRYDSRTGSHNMYKEVRDISENAAAAQVLAE 144
K+K++ GE++ ++ K KNFG+WL YDSR+G+HNMY+E RD++ A Q +
Sbjct 53 KMKKSSGEIVYCGKVFEKSPLRVKNFGIWLHYDSRSGTHNMYQEYRDLTTAGAVTQCYLD 112
Query 145 MAGRHRALASNIQIIRIVQLKGSECRRPHVQQMLS 179
M RH A A +IQ ++ ++ +C RP V+Q S
Sbjct 113 MGARHCAHAHSIQFTKVKEIATGKCHRPAVKQFHS 147
> pfa:PF13_0224 60S ribosomal protein L18, putative; K02882 large
subunit ribosomal protein L18Ae
Length=184
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 101/153 (66%), Gaps = 4/153 (2%)
Query 26 KADKTLQQPIRQFQVVGRQRPAAAAAAAAAATPAYRLRLFAANEVLAVSRFWYLLRQLRK 85
K D +L I Q+ +VGR P A YR+ +FA N+ A SRFWY ++++ K
Sbjct 4 KIDNSLNTNIHQYHIVGRAIPTAKDKNPNV----YRMCIFAKNDTNAKSRFWYFMKKINK 59
Query 86 IKRAHGEVLEVVEINPKRATNPKNFGVWLRYDSRTGSHNMYKEVRDISENAAAAQVLAEM 145
+K+++GE+L +I + KN+GV LRYDSRTG+HNMYKE RD ++ A AQ+ +EM
Sbjct 60 LKKSNGELLACEQIKERFPLRVKNYGVLLRYDSRTGTHNMYKEFRDTTKEGAIAQLYSEM 119
Query 146 AGRHRALASNIQIIRIVQLKGSECRRPHVQQML 178
AGRHRA AS+I IIRI ++ S RRPH++Q+L
Sbjct 120 AGRHRARASSINIIRISEISSSLVRRPHIKQLL 152
> cpv:cgd7_320 60S ribosomal protein L18A ; K02882 large subunit
ribosomal protein L18Ae
Length=185
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 93/153 (60%), Gaps = 4/153 (2%)
Query 28 DKTLQQPIRQFQVVGRQRPAAAAAAAAAATPAYRLRLFAANEVLAVSRFWYLLRQLRKIK 87
D +LQ + Q+ V+GR +P +R+ +FA NEV+A SRF+Y + +L K+K
Sbjct 6 DPSLQMKVNQYMVIGRGKPTELNPHPKV----FRVCIFAPNEVVAKSRFFYFMSRLNKVK 61
Query 88 RAHGEVLEVVEINPKRATNPKNFGVWLRYDSRTGSHNMYKEVRDISENAAAAQVLAEMAG 147
+A+GE+L V I KR T KNF + L+Y SRT MYKE RDIS+ A +Q+ E+AG
Sbjct 62 KANGEILSVTRIFEKRPTYVKNFAILLQYRSRTNVVYMYKEYRDISKTGAVSQMYEELAG 121
Query 148 RHRALASNIQIIRIVQLKGSECRRPHVQQMLSS 180
HRA S+IQIIR+ Q+ +RP Q +S
Sbjct 122 SHRAQRSSIQIIRVSQIDAKLAKRPKTTQFFNS 154
> cel:E04A4.8 rpl-20; Ribosomal Protein, Large subunit family
member (rpl-20); K02882 large subunit ribosomal protein L18Ae
Length=180
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 89/143 (62%), Gaps = 4/143 (2%)
Query 29 KTLQQPIRQFQVVGRQRPAAAAAAAAAATPAYRLRLFAANEVLAVSRFWYLLRQLRKIKR 88
K L + + ++ VVGR+ P TP +++++FA N V+A SRFWY + LR++K+
Sbjct 4 KALGETLNEYVVVGRKIPTEKEPV----TPIWKMQIFATNHVIAKSRFWYFVSMLRRVKK 59
Query 89 AHGEVLEVVEINPKRATNPKNFGVWLRYDSRTGSHNMYKEVRDISENAAAAQVLAEMAGR 148
A+GE+L + ++ K KN+GVWL+YDSRTG HNMY+E RD + A Q +M R
Sbjct 60 ANGEILSIKQVFEKNPGTVKNYGVWLKYDSRTGHHNMYREYRDTTVAGAVTQCYRDMGAR 119
Query 149 HRALASNIQIIRIVQLKGSECRR 171
HRA A I I+++ +K + +R
Sbjct 120 HRAQADRIHILKVQTVKAEDTKR 142
> cel:Y59A8B.6 hypothetical protein; K12855 pre-mRNA-processing
factor 6
Length=968
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query 76 FWYLLRQLRKIKRAHGEVLEV-VEINPKRATNPKNFGVWL---RYDSRTGSHNMYKE--V 129
W LL +L + G++++ V++ R NPKN +WL R++ R G M KE
Sbjct 772 LWILLVRLEE---KAGQIVKARVDLEKARLRNPKNDDLWLESVRFEQRVGCPEMAKERMS 828
Query 130 RDISENAAAAQVLAE---MAGRHRALASNIQIIRIVQLKGSECRRPHV 174
R + E + ++ AE M G H A +I ++ + PHV
Sbjct 829 RALQECEGSGKLWAEAIWMEGPHGRRAKSIDALKKCE------HNPHV 870
> dre:336260 MGC110077, fj59h09, wu:fj59h09; zgc:110077
Length=717
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query 74 SRFWYLLRQLRKIKRAHGEVLEVVEINPKRATNPKNFGVWLRYDSRTGSHNMYKEVRD 131
+++++L + +K A +VL + NP TNPK+ +RY G H++ ++V D
Sbjct 573 TKYFHLTTVEQHMKVAFSKVLRHTKKNP---TNPKDKSTSIRYLKGVGPHHVGQKVTD 627
> mmu:16769 Dsg4, CDHF13, MGC124398, lah; desmoglein 4; K07599
desmoglein 4
Length=1041
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query 111 GVWLRYDSRTGSHNMYKEV----RDISENAAAAQVLAEMAGRHRALASNIQI 158
G WL+ DSRTG +E + I++ AAQ+LA G R I I
Sbjct 434 GSWLKVDSRTGEIQFSREFDMKSKYITDGIYAAQILAIDDGSGRTATGTICI 485
> cel:Y73C8B.3 hypothetical protein
Length=308
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 0/52 (0%)
Query 79 LLRQLRKIKRAHGEVLEVVEINPKRATNPKNFGVWLRYDSRTGSHNMYKEVR 130
L R+L K + G+ +E+ + T+ FG + + GSHN +K +R
Sbjct 6 LCRKLVKFETESGKKVELDAVYEDSLTSGSPFGTVVAFHGSPGSHNDFKYIR 57
> bbo:BBOV_IV004260 23.m06088; bromodomain containing protein
Length=1857
Score = 28.9 bits (63), Expect = 9.2, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 53/129 (41%), Gaps = 15/129 (11%)
Query 29 KTLQQPIRQFQVVGRQRPAAAAAAAAAATPAYRLRLFAANEVLAVSRFWYLLRQLRKIKR 88
K + + +R + R RP A+ + A Y++ + W L + + +
Sbjct 1712 KAVSKAVRLIEKEARFRPFASRIPESVAPNYYQI---------IKTPMWLSLLKSKCKTQ 1762
Query 89 AHGEVLEV------VEINPKRATNPKNFGVWLRYDSRTGSHNMYKEVRDISENAAAAQVL 142
+ +++ V +E+N K+ + + WLR S + ++ ++ + + V+
Sbjct 1763 CYSDMVNVLDDLALIELNCKKYNSETSPNAWLRKMSEVLVDELLMRIQQLTSHLVSPSVI 1822
Query 143 AEMAGRHRA 151
E A HRA
Sbjct 1823 EEWAREHRA 1831
Lambda K H
0.323 0.132 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 4859948100
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40