bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_2269_orf1
Length=134
Score E
Sequences producing significant alignments: (Bits) Value
bbo:BBOV_II007250 18.m06603; translation initiation factor IF-... 220 1e-57
tgo:TGME49_048250 pre-mRNA-splicing factor, putative ; K12834 ... 214 5e-56
pfa:PF10_0179a PHF5-like protein, putative; K12834 PHD finger-... 200 8e-52
ath:AT1G07170 hypothetical protein; K12834 PHD finger-like dom... 198 5e-51
ath:AT2G30000 hypothetical protein 198 5e-51
cel:Y54F10BM.14 phf-5; PHd Finger family member (phf-5); K1283... 191 4e-49
tpv:TP02_0180 hypothetical protein; K12834 PHD finger-like dom... 191 5e-49
dre:286774 phf5a, chunp6910; PHD finger protein 5A; K12834 PHD... 187 9e-48
xla:496306 phf5a, MGC131360; PHD finger protein 5A; K12834 PHD... 187 9e-48
mmu:68479 Phf5a, 1110007B08Rik; PHD finger protein 5A; K12834 ... 187 9e-48
hsa:84844 PHF5A, INI, MGC1346, Rds3, SAP14b, SF3b14b, bK223H9.... 187 9e-48
cpv:cgd6_2400 hypothetical protein ; K12834 PHD finger-like do... 153 2e-37
sce:YPR094W RDS3; Component of the SF3b subcomplex of the U2 s... 129 4e-30
mmu:53883 Celsr2, EGFL2, Flamingo1, KIAA0279, mKIAA0279, mfmi1... 34.3 0.095
hsa:1952 CELSR2, CDHF10, EGFL2, FLJ34118, FLJ42737, FLJ45143, ... 34.3 0.10
hsa:22798 LAMB4; laminin, beta 4; K06245 laminin, beta 4 32.7
tgo:TGME49_044910 MIZ zinc finger protein, putative 31.6 0.80
cpv:cgd8_4620 ISWI related chromatinic protein with an apicomp... 30.0 2.0
xla:100127258 trim8; tripartite motif containing 8; K12001 tri... 29.6 2.9
mmu:16774 Lama3, Lama3B, [a]3B; laminin, alpha 3; K06240 lamin... 29.3 3.3
xla:100037206 dnaja3, tid1; DnaJ (Hsp40) homolog, subfamily A,... 29.3 3.6
mmu:93679 Trim8, AA408830, BB006755, GERP, Rnf27; tripartite m... 29.3 3.9
hsa:81603 TRIM8, GERP, RNF27; tripartite motif containing 8; K... 29.3 3.9
mmu:83945 Dnaja3, 1200003J13Rik, 1810053A11Rik, C81173, Tid-1,... 28.9 5.0
dre:559967 trim8, fc90g07, si:ch211-208d15.5, wu:fc90g07; trip... 28.5 6.0
dre:797338 similar to tripartite motif-containing 8; K12001 tr... 28.5 6.2
cel:K04F10.4 bli-4; BLIstered cuticle family member (bli-4) 28.1 8.3
> bbo:BBOV_II007250 18.m06603; translation initiation factor IF-2;
K12834 PHD finger-like domain-containing protein 5A
Length=1033
Score = 220 bits (560), Expect = 1e-57, Method: Composition-based stats.
Identities = 92/109 (84%), Positives = 102/109 (93%), Gaps = 0/109 (0%)
Query 24 MAAKHHPDLIMCRKQPGIAIGRLCERCDGKCPICDSYVRPHTLVRICDECNYGSFQGRCV 83
M +KHHPDLIMCRKQPGIAIGRLC++CDGKCPICDSYVRP+TLVRICDECNYG+ QGRCV
Sbjct 1 MGSKHHPDLIMCRKQPGIAIGRLCDKCDGKCPICDSYVRPYTLVRICDECNYGTNQGRCV 60
Query 84 ICGGQGISDAFYCKECCQMEKDRDGCPKIVNLGSAKSDLFYARKQFGAK 132
IC G GISDA+YCKECCQ EKDRDGCPKI+NLGSAK+DLFY RK++G K
Sbjct 61 ICSGPGISDAYYCKECCQCEKDRDGCPKIINLGSAKTDLFYERKKYGYK 109
> tgo:TGME49_048250 pre-mRNA-splicing factor, putative ; K12834
PHD finger-like domain-containing protein 5A
Length=112
Score = 214 bits (546), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 101/110 (91%), Positives = 107/110 (97%), Gaps = 0/110 (0%)
Query 24 MAAKHHPDLIMCRKQPGIAIGRLCERCDGKCPICDSYVRPHTLVRICDECNYGSFQGRCV 83
MAAKHHPDLIMCRKQPGIAIGRLCE+CDGKCPICDSYVRPHTLVRICDECNYGS+QGRCV
Sbjct 1 MAAKHHPDLIMCRKQPGIAIGRLCEKCDGKCPICDSYVRPHTLVRICDECNYGSYQGRCV 60
Query 84 ICGGQGISDAFYCKECCQMEKDRDGCPKIVNLGSAKSDLFYARKQFGAKR 133
ICGG GISDA+YCKECCQMEKDRDGCPKIVNLGSAK+DLFY RK++G KR
Sbjct 61 ICGGPGISDAYYCKECCQMEKDRDGCPKIVNLGSAKTDLFYERKKYGFKR 110
> pfa:PF10_0179a PHF5-like protein, putative; K12834 PHD finger-like
domain-containing protein 5A
Length=111
Score = 200 bits (509), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 93/111 (83%), Positives = 103/111 (92%), Gaps = 0/111 (0%)
Query 24 MAAKHHPDLIMCRKQPGIAIGRLCERCDGKCPICDSYVRPHTLVRICDECNYGSFQGRCV 83
MAAKHHPDLIMCRKQPGIAIGRLCE+CDGKCPICDSYVRP+TLVRICDECNYGS+QGRC+
Sbjct 1 MAAKHHPDLIMCRKQPGIAIGRLCEKCDGKCPICDSYVRPYTLVRICDECNYGSYQGRCI 60
Query 84 ICGGQGISDAFYCKECCQMEKDRDGCPKIVNLGSAKSDLFYARKQFGAKRN 134
ICGG GISDA+YCKECC EKDRDGCPKIVNLGSAK+D+FY K++ K+
Sbjct 61 ICGGTGISDAYYCKECCLCEKDRDGCPKIVNLGSAKTDVFYENKKYEFKKQ 111
> ath:AT1G07170 hypothetical protein; K12834 PHD finger-like domain-containing
protein 5A
Length=110
Score = 198 bits (503), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 95/108 (87%), Positives = 101/108 (93%), Gaps = 0/108 (0%)
Query 26 AKHHPDLIMCRKQPGIAIGRLCERCDGKCPICDSYVRPHTLVRICDECNYGSFQGRCVIC 85
AKHHPDLIMCRKQPGIAIGRLCE+CDGKC ICDSYVRP TLVRICDECNYGSFQGRCVIC
Sbjct 2 AKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVIC 61
Query 86 GGQGISDAFYCKECCQMEKDRDGCPKIVNLGSAKSDLFYARKQFGAKR 133
GG GISDA+YCKEC Q EKDRDGCPKIVNLGSAK+DLFY RK++G K+
Sbjct 62 GGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKK 109
> ath:AT2G30000 hypothetical protein
Length=110
Score = 198 bits (503), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 95/108 (87%), Positives = 101/108 (93%), Gaps = 0/108 (0%)
Query 26 AKHHPDLIMCRKQPGIAIGRLCERCDGKCPICDSYVRPHTLVRICDECNYGSFQGRCVIC 85
AKHHPDLIMCRKQPGIAIGRLCE+CDGKC ICDSYVRP TLVRICDECNYGSFQGRCVIC
Sbjct 2 AKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVIC 61
Query 86 GGQGISDAFYCKECCQMEKDRDGCPKIVNLGSAKSDLFYARKQFGAKR 133
GG GISDA+YCKEC Q EKDRDGCPKIVNLGSAK+DLFY RK++G K+
Sbjct 62 GGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKK 109
> cel:Y54F10BM.14 phf-5; PHd Finger family member (phf-5); K12834
PHD finger-like domain-containing protein 5A
Length=110
Score = 191 bits (486), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 89/109 (81%), Positives = 102/109 (93%), Gaps = 0/109 (0%)
Query 26 AKHHPDLIMCRKQPGIAIGRLCERCDGKCPICDSYVRPHTLVRICDECNYGSFQGRCVIC 85
AKHHPDLI CRKQPGIAIGRLCE+CDG+C ICDS+VRP TLVRIC+ECNYGS+QGRCVIC
Sbjct 2 AKHHPDLIFCRKQPGIAIGRLCEKCDGRCVICDSHVRPCTLVRICEECNYGSYQGRCVIC 61
Query 86 GGQGISDAFYCKECCQMEKDRDGCPKIVNLGSAKSDLFYARKQFGAKRN 134
GG G+SDA+YCKEC +EKDRDGCPKIVNLGSAK+DLFY RK+FG+K++
Sbjct 62 GGAGVSDAYYCKECTILEKDRDGCPKIVNLGSAKTDLFYERKKFGSKKS 110
> tpv:TP02_0180 hypothetical protein; K12834 PHD finger-like domain-containing
protein 5A
Length=113
Score = 191 bits (485), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 88/110 (80%), Positives = 99/110 (90%), Gaps = 0/110 (0%)
Query 24 MAAKHHPDLIMCRKQPGIAIGRLCERCDGKCPICDSYVRPHTLVRICDECNYGSFQGRCV 83
M +KHHPDL+MCRKQPGIAIGRLCE+CDGKCPICDSYVRP+ LVRICDECNYG QGRCV
Sbjct 1 MGSKHHPDLVMCRKQPGIAIGRLCEKCDGKCPICDSYVRPNLLVRICDECNYGINQGRCV 60
Query 84 ICGGQGISDAFYCKECCQMEKDRDGCPKIVNLGSAKSDLFYARKQFGAKR 133
IC G GISDA+YCK CCQ EKDRDGCPKI+NLGSAK+DLFY +K++G +
Sbjct 61 ICNGPGISDAYYCKSCCQCEKDRDGCPKIINLGSAKTDLFYEKKKYGQTK 110
> dre:286774 phf5a, chunp6910; PHD finger protein 5A; K12834 PHD
finger-like domain-containing protein 5A
Length=110
Score = 187 bits (474), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 88/108 (81%), Positives = 98/108 (90%), Gaps = 0/108 (0%)
Query 26 AKHHPDLIMCRKQPGIAIGRLCERCDGKCPICDSYVRPHTLVRICDECNYGSFQGRCVIC 85
AKHHPDLI CRKQ G+AIGRLCE+CDGKC ICDSYVRP TLVRICDECNYGS+QGRCVIC
Sbjct 2 AKHHPDLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVIC 61
Query 86 GGQGISDAFYCKECCQMEKDRDGCPKIVNLGSAKSDLFYARKQFGAKR 133
GG G+SDA+YCKEC EKDRDGCPKIVNLGS+K+DLFY RK++G K+
Sbjct 62 GGPGVSDAYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKK 109
> xla:496306 phf5a, MGC131360; PHD finger protein 5A; K12834 PHD
finger-like domain-containing protein 5A
Length=110
Score = 187 bits (474), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 88/108 (81%), Positives = 98/108 (90%), Gaps = 0/108 (0%)
Query 26 AKHHPDLIMCRKQPGIAIGRLCERCDGKCPICDSYVRPHTLVRICDECNYGSFQGRCVIC 85
AKHHPDLI CRKQ G+AIGRLCE+CDGKC ICDSYVRP TLVRICDECNYGS+QGRCVIC
Sbjct 2 AKHHPDLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVIC 61
Query 86 GGQGISDAFYCKECCQMEKDRDGCPKIVNLGSAKSDLFYARKQFGAKR 133
GG G+SDA+YCKEC EKDRDGCPKIVNLGS+K+DLFY RK++G K+
Sbjct 62 GGPGVSDAYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKK 109
> mmu:68479 Phf5a, 1110007B08Rik; PHD finger protein 5A; K12834
PHD finger-like domain-containing protein 5A
Length=110
Score = 187 bits (474), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 88/108 (81%), Positives = 98/108 (90%), Gaps = 0/108 (0%)
Query 26 AKHHPDLIMCRKQPGIAIGRLCERCDGKCPICDSYVRPHTLVRICDECNYGSFQGRCVIC 85
AKHHPDLI CRKQ G+AIGRLCE+CDGKC ICDSYVRP TLVRICDECNYGS+QGRCVIC
Sbjct 2 AKHHPDLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVIC 61
Query 86 GGQGISDAFYCKECCQMEKDRDGCPKIVNLGSAKSDLFYARKQFGAKR 133
GG G+SDA+YCKEC EKDRDGCPKIVNLGS+K+DLFY RK++G K+
Sbjct 62 GGPGVSDAYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKK 109
> hsa:84844 PHF5A, INI, MGC1346, Rds3, SAP14b, SF3b14b, bK223H9.2;
PHD finger protein 5A; K12834 PHD finger-like domain-containing
protein 5A
Length=110
Score = 187 bits (474), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 88/108 (81%), Positives = 98/108 (90%), Gaps = 0/108 (0%)
Query 26 AKHHPDLIMCRKQPGIAIGRLCERCDGKCPICDSYVRPHTLVRICDECNYGSFQGRCVIC 85
AKHHPDLI CRKQ G+AIGRLCE+CDGKC ICDSYVRP TLVRICDECNYGS+QGRCVIC
Sbjct 2 AKHHPDLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVIC 61
Query 86 GGQGISDAFYCKECCQMEKDRDGCPKIVNLGSAKSDLFYARKQFGAKR 133
GG G+SDA+YCKEC EKDRDGCPKIVNLGS+K+DLFY RK++G K+
Sbjct 62 GGPGVSDAYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKK 109
> cpv:cgd6_2400 hypothetical protein ; K12834 PHD finger-like
domain-containing protein 5A
Length=100
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 69/100 (69%), Positives = 84/100 (84%), Gaps = 0/100 (0%)
Query 29 HPDLIMCRKQPGIAIGRLCERCDGKCPICDSYVRPHTLVRICDECNYGSFQGRCVICGGQ 88
P L+MCRKQPG+AIGRLC RC+G+CPICDS V P T+VRIC+ECNYGS +GRC+ICG +
Sbjct 1 EPGLLMCRKQPGVAIGRLCVRCEGRCPICDSLVHPETVVRICNECNYGSQKGRCIICGSE 60
Query 89 GISDAFYCKECCQMEKDRDGCPKIVNLGSAKSDLFYARKQ 128
G+SDA+YC+EC EKDRDGCPKI+NLGS+K D Y K+
Sbjct 61 GVSDAYYCRECTICEKDRDGCPKIINLGSSKIDSLYQHKK 100
> sce:YPR094W RDS3; Component of the SF3b subcomplex of the U2
snRNP, zinc cluster protein involved in pre-mRNA splicing and
cycloheximide resistance; K12834 PHD finger-like domain-containing
protein 5A
Length=107
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 78/104 (75%), Gaps = 1/104 (0%)
Query 26 AKHHPDLIMCRKQPGIAIGRLCERCDGKCPICDSYVRPHTLVRICDECNYGSFQGRCVIC 85
++H DLIMC KQPG+ G LCE+CDGKCPICDSYVRP VR+C+ C++G C+IC
Sbjct 2 SRHQFDLIMCLKQPGVQTGLLCEKCDGKCPICDSYVRPKRKVRVCENCSFGKQAKNCIIC 61
Query 86 G-GQGISDAFYCKECCQMEKDRDGCPKIVNLGSAKSDLFYARKQ 128
G++DAFYC ECC++ KD+DGCP+I+NLGS + D + +K+
Sbjct 62 NLNVGVNDAFYCWECCRLGKDKDGCPRILNLGSNRLDRHFEKKK 105
> mmu:53883 Celsr2, EGFL2, Flamingo1, KIAA0279, mKIAA0279, mfmi1;
cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo
homolog, Drosophila); K04601 cadherin EGF LAG seven-pass G-type
receptor 2 (flamingo)
Length=2917
Score = 34.3 bits (77), Expect = 0.095, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 27/101 (26%)
Query 30 PDLIMCRKQPGIAIGRLCERCDGKCPICDSYVRPHTLVRICDECNYGSFQGRCVICGGQG 89
P ++C P ++ R+C+ DG+CP +P + R CD C+
Sbjct 1919 PTCLLCDCYPTGSLSRVCDPEDGQCP-----CKPGVIGRQCDRCD--------------- 1958
Query 90 ISDAFYCKECCQMEKDRDGCPKIVNLGSAKSDLFYARKQFG 130
+ F E + D CP+ + G +++ R +FG
Sbjct 1959 --NPFAEVTTNGCEVNYDSCPRAIEAG-----IWWPRTRFG 1992
> hsa:1952 CELSR2, CDHF10, EGFL2, FLJ34118, FLJ42737, FLJ45143,
FLJ45845, Flamingo1, KIAA0279, MEGF3; cadherin, EGF LAG seven-pass
G-type receptor 2 (flamingo homolog, Drosophila); K04601
cadherin EGF LAG seven-pass G-type receptor 2 (flamingo)
Length=2923
Score = 34.3 bits (77), Expect = 0.10, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 27/101 (26%)
Query 30 PDLIMCRKQPGIAIGRLCERCDGKCPICDSYVRPHTLVRICDECNYGSFQGRCVICGGQG 89
P ++C P ++ R+C+ DG+CP +P + R CD C+
Sbjct 1919 PTCLLCDCYPTGSLSRVCDPEDGQCP-----CKPGVIGRQCDRCD--------------- 1958
Query 90 ISDAFYCKECCQMEKDRDGCPKIVNLGSAKSDLFYARKQFG 130
+ F E + D CP+ + G +++ R +FG
Sbjct 1959 --NPFAEVTTNGCEVNYDSCPRAIEAG-----IWWPRTRFG 1992
> hsa:22798 LAMB4; laminin, beta 4; K06245 laminin, beta 4
Length=1761
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query 24 MAAKHHPDLIMCRKQPGIAIGRLCERCDGKCPICDSYVRPHTLVRICDECNYGSF 78
M+AK H + C+ P ++G C R G+C +P + R CD C+ GS+
Sbjct 758 MSAKLHDGAVACKCHPQGSVGSSCSRLGGQC-----QCKPLVVGRCCDRCSTGSY 807
> tgo:TGME49_044910 MIZ zinc finger protein, putative
Length=1140
Score = 31.6 bits (70), Expect = 0.80, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 0/22 (0%)
Query 45 RLCERCDGKCPICDSYVRPHTL 66
R C R KCP+C+ Y PH L
Sbjct 1064 RHCARSSWKCPLCEEYAFPHEL 1085
> cpv:cgd8_4620 ISWI related chromatinic protein with an apicomplexan
specific domain architecture composed of 3x PHD+SNF2
ATpase+2xPHD ; K01509 adenosinetriphosphatase [EC:3.6.1.3]
Length=2140
Score = 30.0 bits (66), Expect = 2.0, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 29/82 (35%), Gaps = 31/82 (37%)
Query 66 LVRICDECNYGSFQGRCVICG----------------GQGISDAFYCKEC------CQME 103
L R CD C G RC CG I D+F C +C C +
Sbjct 8 LRRYCDICRDGDTDLRCSQCGKVFHFDCLRNCNLIGSDAEIDDSFCCPDCKNNEDFCYIC 67
Query 104 KDR---------DGCPKIVNLG 116
+D DGCPK +LG
Sbjct 68 RDNETGDVMLYCDGCPKSAHLG 89
> xla:100127258 trim8; tripartite motif containing 8; K12001 tripartite
motif-containing protein 8
Length=551
Score = 29.6 bits (65), Expect = 2.9, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query 33 IMCRKQPGIAIGRLCERCDGKCPICDSYVRPH 64
+ CR+ P + ++C RC+ C C S+V+ H
Sbjct 93 VFCRRGPPLPAQKICLRCEAPC--CQSHVQTH 122
> mmu:16774 Lama3, Lama3B, [a]3B; laminin, alpha 3; K06240 laminin,
alpha 3/5
Length=3330
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 7/74 (9%)
Query 7 SFNFCPQAS--LAKVAAAKMAAKHHPDLIMCRKQPGIAIGRLCERCDGKCPICDSYVRPH 64
SF PQA+ K +A + A +H I C P G C G+CP RP+
Sbjct 1233 SFYIDPQAASGFCKNSARSLVAFYHNGAIPCECDPAGTAGHHCSPEGGQCP-----CRPN 1287
Query 65 TLVRICDECNYGSF 78
+ R C C G +
Sbjct 1288 VIGRQCSRCATGYY 1301
> xla:100037206 dnaja3, tid1; DnaJ (Hsp40) homolog, subfamily
A, member 3; K09504 DnaJ homolog subfamily A member 3
Length=457
Score = 29.3 bits (64), Expect = 3.6, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 16/73 (21%)
Query 37 KQPGIAIGRLCERCDGKCPICDSYVRPHTLVRICDEC--------NYGSFQGR--CVICG 86
K+ + I C RCDGK P T ++ C C N G F R C CG
Sbjct 201 KEISVNITDTCHRCDGKGN------EPGTKLQHCHYCNGTGMETINTGPFVMRSTCRRCG 254
Query 87 GQGISDAFYCKEC 99
G+G + C C
Sbjct 255 GKGSTMTNPCLSC 267
> mmu:93679 Trim8, AA408830, BB006755, GERP, Rnf27; tripartite
motif-containing 8; K12001 tripartite motif-containing protein
8
Length=551
Score = 29.3 bits (64), Expect = 3.9, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query 33 IMCRKQPGIAIGRLCERCDGKCPICDSYVRPH 64
+ CR+ P + ++C RC+ C C S+V+ H
Sbjct 93 VFCRRGPPLPAQKVCLRCEAPC--CQSHVQTH 122
> hsa:81603 TRIM8, GERP, RNF27; tripartite motif containing 8;
K12001 tripartite motif-containing protein 8
Length=551
Score = 29.3 bits (64), Expect = 3.9, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query 33 IMCRKQPGIAIGRLCERCDGKCPICDSYVRPH 64
+ CR+ P + ++C RC+ C C S+V+ H
Sbjct 93 VFCRRGPPLPAQKVCLRCEAPC--CQSHVQTH 122
> mmu:83945 Dnaja3, 1200003J13Rik, 1810053A11Rik, C81173, Tid-1,
Tid1l; DnaJ (Hsp40) homolog, subfamily A, member 3; K09504
DnaJ homolog subfamily A member 3
Length=453
Score = 28.9 bits (63), Expect = 5.0, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 16/63 (25%)
Query 37 KQPGIAIGRLCERCDGKCPICDSYVRPHTLVRICDEC--------NYGSFQGR--CVICG 86
K+ + I CERCDGK P T V+ C C N G F R C CG
Sbjct 226 KEFTVNIMDTCERCDGKGN------EPGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCG 279
Query 87 GQG 89
G+G
Sbjct 280 GRG 282
> dre:559967 trim8, fc90g07, si:ch211-208d15.5, wu:fc90g07; tripartite
motif-containing 8
Length=564
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query 33 IMCRKQPGIAIGRLCERCDGKCPICDSYVRPH 64
I+CR+ P + ++C RC+ C C S+V+ H
Sbjct 93 ILCRRGPPLQAQKVCLRCNAPC--CHSHVQTH 122
> dre:797338 similar to tripartite motif-containing 8; K12001
tripartite motif-containing protein 8
Length=564
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query 33 IMCRKQPGIAIGRLCERCDGKCPICDSYVRPH 64
I+CR+ P + ++C RC+ C C S+V+ H
Sbjct 93 ILCRRGPPLQAQKVCLRCNAPC--CHSHVQTH 122
> cel:K04F10.4 bli-4; BLIstered cuticle family member (bli-4)
Length=942
Score = 28.1 bits (61), Expect = 8.3, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query 52 GKCPICDSYVRPHTL--VRICDECNYGSFQGR---CVICGGQGISDAFYCKECCQ 101
GKC +CDS T C++C+ G +G C C +G + ++ C++C +
Sbjct 804 GKCDLCDSSCETCTAPGPMSCEKCSKGYGKGSIGYCRPCCPEGSTKSWQCEDCSK 858
Lambda K H
0.327 0.141 0.473
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2231140792
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40