bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_2198_orf1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
tpv:TP02_0370 60S acidic ribosomal protein P2; K02943 large su... 94.0 1e-19
cpv:cgd2_130 60S acidic ribosomal protein LP2 ; K02943 large s... 89.7 2e-18
pfa:PFC0400w 60S Acidic ribosomal protein P2, putative; K02943... 87.0 1e-17
tgo:TGME49_109810 60S acidic ribosomal protein P2, putative ; ... 85.1 5e-17
bbo:BBOV_III006260 17.m07556; 60S acidic ribosomal protein P2 ... 78.2 6e-15
dre:335629 rplp2, RpP1, wu:fb05g05, wu:fj30h02, zgc:73372; rib... 75.1 5e-14
cel:Y62E10A.1 rla-2; Ribosomal protein, Large subunit, Acidic ... 68.6 5e-12
ath:AT3G44590 60S acidic ribosomal protein P2 (RPP2D); K02943 ... 67.0 1e-11
hsa:6181 RPLP2, D11S2243E, MGC71408, P2, RPP2; ribosomal prote... 65.1 5e-11
mmu:67186 Rplp2, 2700049I22Rik; ribosomal protein, large P2; K... 64.7 7e-11
ath:AT3G28500 60S acidic ribosomal protein P2 (RPP2C); K02943 ... 64.7 7e-11
dre:558312 rplp2l; ribosomal protein, large P2, like; K02943 l... 64.3 8e-11
sce:YDR382W RPP2B, RPL45, YPA1; Rpp2bp; K02943 large subunit r... 63.9 1e-10
cel:C37A2.7 hypothetical protein; K02943 large subunit ribosom... 62.4 4e-10
xla:443901 MGC80163 protein; K02943 large subunit ribosomal pr... 62.0 4e-10
xla:100049136 hypothetical protein LOC100049136 59.7 2e-09
xla:779230 rplp2, MGC154377; ribosomal protein, large, P2; K02... 58.2 7e-09
ath:AT5G40040 60S acidic ribosomal protein P2 (RPP2E); K02943 ... 56.2 3e-08
ath:AT2G27710 60S acidic ribosomal protein P2 (RPP2B) 54.3 9e-08
ath:AT2G27720 60S acidic ribosomal protein P2 (RPP2A); K02943 ... 41.2 8e-04
sce:YOL039W RPP2A, RPL44, RPLA2; Ribosomal protein P2 alpha, a... 38.9 0.005
mmu:244668 Sipa1l2, BC058408, mKIAA1389; signal-induced prolif... 33.1 0.25
ath:AT4G00810 60S acidic ribosomal protein P1 (RPP1B) 30.8 1.1
tgo:TGME49_049680 hypothetical protein 30.8 1.2
ath:AT5G24510 60s acidic ribosomal protein P1, putative; K0294... 30.4 1.6
ath:AT1G01100 60S acidic ribosomal protein P1 (RPP1A) 29.6 2.5
ath:AT5G47700 60S acidic ribosomal protein P1 (RPP1C); K02942 ... 29.6 2.7
mmu:319565 Syne2, 6820443O06Rik, AW546258, D12Ertd777e, MGC966... 29.3 3.3
tgo:TGME49_105230 hypothetical protein 28.1 7.3
> tpv:TP02_0370 60S acidic ribosomal protein P2; K02943 large
subunit ribosomal protein LP2
Length=110
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 76/116 (65%), Gaps = 6/116 (5%)
Query 2 MAMKYVAAYLMTVLGGNEAPTAADVSRVLEAVGAEVNPEVLKTLIDAMQGKAAHEVISAG 61
M++KYVA+YL+ V GN++P+ DV VL +VG+EV+ + L A+ GK+ HE ISAG
Sbjct 1 MSLKYVASYLLAVTCGNDSPSKDDVRDVLNSVGSEVDEDALNAFFSAVSGKSVHETISAG 60
Query 62 LEKLQKVPCGGGAAAAAPAAAAAAGGGDSSSAAKETKKEEPEEEEEDGDMGLSLFD 117
L KLQ +P GGG A A+ A+ SS +E K+EPE EEE+ DMG SLFD
Sbjct 61 LSKLQTLPAGGGVAVASTVQASG------SSEKQEESKKEPEPEEEEDDMGFSLFD 110
> cpv:cgd2_130 60S acidic ribosomal protein LP2 ; K02943 large
subunit ribosomal protein LP2
Length=112
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 78/116 (67%), Gaps = 4/116 (3%)
Query 2 MAMKYVAAYLMTVLGGNEAPTAADVSRVLEAVGAEVNPEVLKTLIDAMQGKAAHEVISAG 61
M MKYVAAYL+ V G E PTA+D+ +VLE+VG E + ++ LI M GK +HEVI++G
Sbjct 1 MGMKYVAAYLLCVSSGKEQPTASDIKKVLESVGIEYDQSIIDVLISNMSGKLSHEVIASG 60
Query 62 LEKLQKVPCGGGAAAAAPAAAAAAGGGDSSSAAKETKKEEPEEEEEDGDMGLSLFD 117
L KLQ VP GG A + AAA+ DS+ A K+ + EEEEE+GD+G SLFD
Sbjct 61 LSKLQSVPTGGVAVSGGAAAASGGAAQDSAPAEKKKE----EEEEEEGDLGFSLFD 112
> pfa:PFC0400w 60S Acidic ribosomal protein P2, putative; K02943
large subunit ribosomal protein LP2
Length=112
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 51/67 (76%), Gaps = 0/67 (0%)
Query 2 MAMKYVAAYLMTVLGGNEAPTAADVSRVLEAVGAEVNPEVLKTLIDAMQGKAAHEVISAG 61
MAMKYVAAYLM VLGGNE P+ +V VL AV A+V EVL ID+++GK+ HE+I+ G
Sbjct 1 MAMKYVAAYLMCVLGGNENPSTKEVKNVLGAVNADVEDEVLNNFIDSLKGKSCHELITDG 60
Query 62 LEKLQKV 68
L+KLQ +
Sbjct 61 LKKLQNI 67
> tgo:TGME49_109810 60S acidic ribosomal protein P2, putative
; K02943 large subunit ribosomal protein LP2
Length=113
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 51/71 (71%), Gaps = 0/71 (0%)
Query 2 MAMKYVAAYLMTVLGGNEAPTAADVSRVLEAVGAEVNPEVLKTLIDAMQGKAAHEVISAG 61
MAMKYVAAYLM VL G +APT V + L +VG +V +++ A++GK HE+I+AG
Sbjct 1 MAMKYVAAYLMVVLSGTDAPTKKQVEKTLSSVGIDVEDDIMDAFFKAVEGKTPHELIAAG 60
Query 62 LEKLQKVPCGG 72
+EKLQKVP GG
Sbjct 61 MEKLQKVPSGG 71
> bbo:BBOV_III006260 17.m07556; 60S acidic ribosomal protein P2
(L12EI); K02943 large subunit ribosomal protein LP2
Length=112
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 50/65 (76%), Gaps = 0/65 (0%)
Query 2 MAMKYVAAYLMTVLGGNEAPTAADVSRVLEAVGAEVNPEVLKTLIDAMQGKAAHEVISAG 61
MA+KYV++YL+ V GNE P+ D+ ++L+AVG++V+ E L+ L+D+M GK HE I+AG
Sbjct 1 MALKYVSSYLLAVAAGNENPSVDDLKKILDAVGSDVDEECLQGLVDSMSGKTVHETIAAG 60
Query 62 LEKLQ 66
+ KLQ
Sbjct 61 MTKLQ 65
> dre:335629 rplp2, RpP1, wu:fb05g05, wu:fj30h02, zgc:73372; ribosomal
protein, large P2; K02943 large subunit ribosomal protein
LP2
Length=115
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 70/115 (60%), Gaps = 1/115 (0%)
Query 4 MKYVAAYLMTVLGGNEAPTAADVSRVLEAVGAEVNPEVLKTLIDAMQGKAAHEVISAGLE 63
M+YVAAYL+ VLGGN P+A D+ +L +VG E + E L ++ + GK +EV++AGL
Sbjct 1 MRYVAAYLLAVLGGNTNPSAKDIKNILGSVGIEADDERLNKVVSELNGKDINEVMNAGLS 60
Query 64 KLQKVPCGGGAAAAA-PAAAAAAGGGDSSSAAKETKKEEPEEEEEDGDMGLSLFD 117
KL VP GG A + A ++ +A ++ ++++ E EE D DMG LFD
Sbjct 61 KLASVPAGGAVAVSTASAGGGGGAPAEAPAAEEKKEEKKEESEESDEDMGFGLFD 115
> cel:Y62E10A.1 rla-2; Ribosomal protein, Large subunit, Acidic
(P1) family member (rla-2); K02943 large subunit ribosomal
protein LP2
Length=110
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
Query 4 MKYVAAYLMTVLGGNEAPTAADVSRVLEAVGAEVNPEVLKTLIDAMQGKAAHEVISAGLE 63
M+YV+AYL+ VLGGN P D+ +L AVG + + E K ++ + GK E+I+ G
Sbjct 1 MRYVSAYLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSA 60
Query 64 KLQKVPCGGGAAAAAPAAAAAAGGGDSSSAAKETKKEEPEEEEEDGDMGLSLFD 117
L V G AAAA AA A S K KKEEP+EE +D DMG LFD
Sbjct 61 GLVSVSGGAAPAAAAAPAAGGAAPAADS---KPAKKEEPKEESDD-DMGFGLFD 110
> ath:AT3G44590 60S acidic ribosomal protein P2 (RPP2D); K02943
large subunit ribosomal protein LP2
Length=111
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 75/114 (65%), Gaps = 3/114 (2%)
Query 4 MKYVAAYLMTVLGGNEAPTAADVSRVLEAVGAEVNPEVLKTLIDAMQGKAAHEVISAGLE 63
MK AA+L+ VLGGN P+A ++ ++ AVGA+V+ E ++ L+ + GK E+I++G E
Sbjct 1 MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGRE 60
Query 64 KLQKVPCGGGAAAAAPAAAAAAGGGDSSSAAKETKKEEPEEEEEDGDMGLSLFD 117
KL VP GGG A +A ++ G +++ A++ + ++ E+EE D DMG SLF+
Sbjct 61 KLASVPSGGGVAVSAAPSSGGGG---AAAPAEKKEAKKEEKEESDDDMGFSLFE 111
> hsa:6181 RPLP2, D11S2243E, MGC71408, P2, RPP2; ribosomal protein,
large, P2; K02943 large subunit ribosomal protein LP2
Length=115
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 45/66 (68%), Gaps = 0/66 (0%)
Query 4 MKYVAAYLMTVLGGNEAPTAADVSRVLEAVGAEVNPEVLKTLIDAMQGKAAHEVISAGLE 63
M+YVA+YL+ LGGN +P+A D+ ++L++VG E + + L +I + GK +VI+ G+
Sbjct 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query 64 KLQKVP 69
KL VP
Sbjct 61 KLASVP 66
> mmu:67186 Rplp2, 2700049I22Rik; ribosomal protein, large P2;
K02943 large subunit ribosomal protein LP2
Length=115
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 45/66 (68%), Gaps = 0/66 (0%)
Query 4 MKYVAAYLMTVLGGNEAPTAADVSRVLEAVGAEVNPEVLKTLIDAMQGKAAHEVISAGLE 63
M+YVA+YL+ LGGN +P+A D+ ++L++VG E + + L +I + GK +VI+ G+
Sbjct 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGVG 60
Query 64 KLQKVP 69
KL VP
Sbjct 61 KLASVP 66
> ath:AT3G28500 60S acidic ribosomal protein P2 (RPP2C); K02943
large subunit ribosomal protein LP2
Length=115
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query 4 MKYVAAYLMTVLGGNEAPTAADVSRVLEAVGAEVNPEVLKTLIDAMQGKAAHEVISAGLE 63
MK +AA+L+ LGGNE PT+ D+ ++LE+VGAE++ + L ++ E+I+AG E
Sbjct 1 MKVIAAFLLAKLGGNENPTSNDLKKILESVGAEIDETKIDLLFSLIKDHDVTELIAAGRE 60
Query 64 KLQKVPCGGGAAAAAPAAAAAAGGGDSSSAAKETKKEEPEEEEEDGDMG-LSLFD 117
K+ + GG A A + A+ KK E ++E D G + LFD
Sbjct 61 KMSALSSGGPAVAMVAGGGGGGAASAAEPVAESKKKVEEVKDESSDDAGMMGLFD 115
> dre:558312 rplp2l; ribosomal protein, large P2, like; K02943
large subunit ribosomal protein LP2
Length=114
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 71/114 (62%), Gaps = 0/114 (0%)
Query 4 MKYVAAYLMTVLGGNEAPTAADVSRVLEAVGAEVNPEVLKTLIDAMQGKAAHEVISAGLE 63
M+YVAAYL+ LGG ++P+ D+ ++LE+VG E + + ++ + GK EVI+ G
Sbjct 1 MRYVAAYLLAALGGKDSPSTGDIKKILESVGIEADDVRMSKVVAELNGKNVEEVIAQGFS 60
Query 64 KLQKVPCGGGAAAAAPAAAAAAGGGDSSSAAKETKKEEPEEEEEDGDMGLSLFD 117
KL VP GG A ++ AA ++ G + +A ++ ++++ E EE D DMG LFD
Sbjct 61 KLASVPSGGAVAVSSAAAPSSGGSAAAPAAEEKKEEKKEESEESDDDMGFGLFD 114
> sce:YDR382W RPP2B, RPL45, YPA1; Rpp2bp; K02943 large subunit
ribosomal protein LP2
Length=110
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query 4 MKYVAAYLMTVLGGNEAPTAADVSRVLEAVGAEVNPEVLKTLIDAMQGKAA-HEVISAGL 62
MKY+AAYL+ V GGN AP+AAD+ V+E+VGAEV+ + L+ +++GK + E+I+ G
Sbjct 1 MKYLAAYLLLVQGGNAAPSAADIKAVVESVGAEVDEARINELLSSLEGKGSLEEIIAEGQ 60
Query 63 EKLQKVPC 70
+K VP
Sbjct 61 KKFATVPT 68
> cel:C37A2.7 hypothetical protein; K02943 large subunit ribosomal
protein LP2
Length=107
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 0/65 (0%)
Query 4 MKYVAAYLMTVLGGNEAPTAADVSRVLEAVGAEVNPEVLKTLIDAMQGKAAHEVISAGLE 63
MKY+ AYL+ LGGN +P+A DV +VLEA G + + E +++DA++GK EVI+ G
Sbjct 1 MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60
Query 64 KLQKV 68
KL V
Sbjct 61 KLSSV 65
> xla:443901 MGC80163 protein; K02943 large subunit ribosomal
protein LP2
Length=115
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%), Gaps = 0/62 (0%)
Query 4 MKYVAAYLMTVLGGNEAPTAADVSRVLEAVGAEVNPEVLKTLIDAMQGKAAHEVISAGLE 63
M+YVAAYL+ VLGG+E PT AD++++L +VG E + + + ++ ++GK+ EVI+ G
Sbjct 1 MRYVAAYLLAVLGGSECPTIADLTKILNSVGIETDQQRAEKVVGELKGKSIDEVIAQGNS 60
Query 64 KL 65
KL
Sbjct 61 KL 62
> xla:100049136 hypothetical protein LOC100049136
Length=111
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 0/65 (0%)
Query 4 MKYVAAYLMTVLGGNEAPTAADVSRVLEAVGAEVNPEVLKTLIDAMQGKAAHEVISAGLE 63
M+YVAAYL+ LGG +P+A D+ +L++VG + + E +K +I + GK +V+++GL
Sbjct 1 MRYVAAYLLAALGGKTSPSAGDIKSILKSVGIDADDERVKKVIGELGGKDLDDVVNSGLA 60
Query 64 KLQKV 68
KL V
Sbjct 61 KLSSV 65
> xla:779230 rplp2, MGC154377; ribosomal protein, large, P2; K02943
large subunit ribosomal protein LP2
Length=115
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 43/62 (69%), Gaps = 0/62 (0%)
Query 4 MKYVAAYLMTVLGGNEAPTAADVSRVLEAVGAEVNPEVLKTLIDAMQGKAAHEVISAGLE 63
M+YVAAYL+ LGG E+PT AD++++L +VG E + + ++ ++GK+ E+I+ G
Sbjct 1 MRYVAAYLLAALGGTESPTIADLTKILNSVGIETDQHRAEKVVGELKGKSIDEIIAQGNT 60
Query 64 KL 65
KL
Sbjct 61 KL 62
> ath:AT5G40040 60S acidic ribosomal protein P2 (RPP2E); K02943
large subunit ribosomal protein LP2
Length=114
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 0/62 (0%)
Query 4 MKYVAAYLMTVLGGNEAPTAADVSRVLEAVGAEVNPEVLKTLIDAMQGKAAHEVISAGLE 63
MK VAAYL+ L GNE P+ AD+ +++E+VGAE++ E + ++ + E+I+ G E
Sbjct 1 MKVVAAYLLAKLSGNENPSVADLKKIVESVGAEIDQEKIDLFFSLIKDRDVTELIAVGRE 60
Query 64 KL 65
K+
Sbjct 61 KM 62
> ath:AT2G27710 60S acidic ribosomal protein P2 (RPP2B)
Length=115
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 0/65 (0%)
Query 4 MKYVAAYLMTVLGGNEAPTAADVSRVLEAVGAEVNPEVLKTLIDAMQGKAAHEVISAGLE 63
MK VAAYL+ VL G +PT+AD+ +L +VGAE ++ L+ ++GK E+I+AG E
Sbjct 1 MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60
Query 64 KLQKV 68
KL V
Sbjct 61 KLASV 65
> ath:AT2G27720 60S acidic ribosomal protein P2 (RPP2A); K02943
large subunit ribosomal protein LP2
Length=130
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Query 4 MKYVAAYLMTVLGGNEAPTAADVSRVL---------------EAVGAEVNPEVLKTLIDA 48
MK VAA+L+ VL G +PT D+ +L + GAE ++ L+
Sbjct 1 MKVVAAFLLAVLSGKASPTTGDIKDILGSGIMVLVLDCVVIGDCFGAETEDSQIELLLKE 60
Query 49 MQGKAAHEVISAGLEKLQKV 68
++GK E+I+AG EKL V
Sbjct 61 VKGKDLAELIAAGREKLASV 80
> sce:YOL039W RPP2A, RPL44, RPLA2; Ribosomal protein P2 alpha,
a component of the ribosomal stalk, which is involved in the
interaction between translational elongation factors and the
ribosome; regulates the accumulation of P1 (Rpp1Ap and Rpp1Bp)
in the cytoplasm; K02943 large subunit ribosomal protein
LP2
Length=106
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query 17 GNEAPTAADVSRVLEAVGAEVNPEVLKTLIDAMQGKAAHEVISAGLEKLQKV 68
GN P A + +LE+VG E+ E + +++ A++GK+ E+I+ G EKL V
Sbjct 14 GN-TPDATKIKAILESVGIEIEDEKVSSVLSALEGKSVDELITEGNEKLAAV 64
> mmu:244668 Sipa1l2, BC058408, mKIAA1389; signal-induced proliferation-associated
1 like 2
Length=1722
Score = 33.1 bits (74), Expect = 0.25, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query 60 AGLEKLQKVPCGGGAAAAAPAAAAAAGGGDSSSAAKE--TKKEEPEEEEEDG 109
A + K + + G AA+ P AGG +S +KE KE P+ +E DG
Sbjct 350 ASVGKRKNITTGASAASQTPVPVGPAGGCESPLGSKEDLNSKENPDADEGDG 401
> ath:AT4G00810 60S acidic ribosomal protein P1 (RPP1B)
Length=113
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Query 95 KETKKEEPEEEEEDGDMGLSLFD 117
KE KK+EP EE DGD+G LFD
Sbjct 92 KEEKKDEPAEES-DGDLGFGLFD 113
> tgo:TGME49_049680 hypothetical protein
Length=578
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 0/30 (0%)
Query 83 AAAGGGDSSSAAKETKKEEPEEEEEDGDMG 112
A+ GGGDSS ++ +++ PE E DG+ G
Sbjct 499 ASDGGGDSSETGRKRRRQSPEAAEPDGESG 528
> ath:AT5G24510 60s acidic ribosomal protein P1, putative; K02942
large subunit ribosomal protein LP1
Length=111
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query 72 GGAAAAAPAAAAAAGGGDSSSAAKETKKE-EPEEEEEDGDMGLSLFD 117
GG A P AA S S +E K E E +EE + DM + LFD
Sbjct 65 GGCGVARPVTTAAPTASQSVSIPEEKKNEMEVIKEESEDDMIIGLFD 111
> ath:AT1G01100 60S acidic ribosomal protein P1 (RPP1A)
Length=96
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Query 95 KETKKEEPEEEEEDGDMGLSLFD 117
+E KK+EP EE DGD+G LFD
Sbjct 75 EEKKKDEPAEES-DGDLGFGLFD 96
> ath:AT5G47700 60S acidic ribosomal protein P1 (RPP1C); K02942
large subunit ribosomal protein LP1
Length=113
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Query 95 KETKKEEPEEEEEDGDMGLSLFD 117
+E KK+EP EE DGD+G LFD
Sbjct 92 EEKKKDEPAEES-DGDLGFGLFD 113
> mmu:319565 Syne2, 6820443O06Rik, AW546258, D12Ertd777e, MGC96690,
NUA, Nesp2g, mKIAA1011; synaptic nuclear envelope 2
Length=6874
Score = 29.3 bits (64), Expect = 3.3, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query 62 LEKLQKVPCG--GGAAAAAPAAAAAAGGGDSSSAAKETKKEEPEEEEEDGDM 111
L K+Q P G G + + +A AA GG K +K+E E+EE G +
Sbjct 674 LVKIQDQPPGNSSGTSLSKESAMAAEPGGSRGEDVKAAEKQEVEDEESAGQL 725
> tgo:TGME49_105230 hypothetical protein
Length=1727
Score = 28.1 bits (61), Expect = 7.3, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query 42 LKTLIDAMQGKAAHEVISAGLEKLQKVPCGGGAAAAAPAAAAAAGGGDSSSAAKETKKEE 101
L L+ + A V S + K Q++P G +A +P+ G G++ A + + EE
Sbjct 895 LVCLLQCFCQETASSVFSRQVGKRQQLP-GLPPSALSPSKGERGGAGENEGTAADPRPEE 953
Query 102 PEEEEEDGDMG 112
EE++ + G
Sbjct 954 GEEKDAESKNG 964
Lambda K H
0.306 0.124 0.330
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2032807080
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40