bitscore colors: <40, 40-50 , 50-80, 80-200, >200




           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
           164,496 sequences; 82,071,388 total letters



Query=  Eten_1314_orf1
Length=353
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  tgo:TGME49_073090  cell division protein 48, putative (EC:3.4.2...   504    2e-142
  cpv:cgd1_330  CDC48 like AAA ATPase ortholog ; K13525 transitio...   452    1e-126
  bbo:BBOV_IV008360  23.m05756; cell division control protein 48;...   424    2e-118
  ath:AT5G03340  cell division cycle protein 48, putative / CDC48...   424    2e-118
  ath:AT3G09840  CDC48; CDC48 (CELL DIVISION CYCLE 48); ATPase/ i...   423    5e-118
  ath:AT3G53230  cell division cycle protein 48, putative / CDC48...   417    2e-116
  tpv:TP01_0937  cell division cycle protein 48; K13525 transitio...   416    8e-116
  pfa:PFF0940c  cell division cycle protein 48 homologue, putativ...   414    2e-115
  xla:380491  vcp, MGC52611; valosin containing protein; K13525 t...   413    5e-115
  mmu:269523  Vcp, 3110001E05, CDC48, p97, p97/VCP; valosin conta...   413    7e-115
  hsa:7415  VCP, IBMPFD, MGC131997, MGC148092, MGC8560, TERA, p97...   413    7e-115
  dre:327197  vcp, CDC48, wu:fd16d05, wu:fj63d11; valosin contain...   412    1e-114
  dre:563679  MGC136908; zgc:136908                                    396    7e-110
  sce:YDL126C  CDC48; ATPase in ER, nuclear membrane and cytosol ...   382    1e-105
  cel:C06A1.1  cdc-48.1; Cell Division Cycle related family membe...   353    6e-97
  cel:C41C4.8  cdc-48.2; Cell Division Cycle related family membe...   349    7e-96
  tgo:TGME49_121640  cell division protein 48, putative ; K13525 ...   170    8e-42
  bbo:BBOV_IV001700  21.m02769; cell division cycle protein ATPas...   165    3e-40
  pfa:PF07_0047  cell division cycle ATPase, putative                  159    2e-38
  tpv:TP03_0490  cell division cycle protein 48; K13525 transitio...   151    5e-36
  mmu:57815  Spata5, 2510048F20Rik, C78064, Spaf; spermatogenesis...   104    7e-22
  hsa:166378  SPATA5, AFG2, SPAF; spermatogenesis associated 5; K...   103    1e-21
  ath:AT5G58290  RPT3; RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE ...  99.0    2e-20
  ath:AT1G53780  ATP binding / ATPase/ hydrolase/ nucleoside-trip...  99.0    2e-20
  pfa:PF10_0081  26S proteasome regulatory subunit 4, putative; K...  98.6    3e-20
  cpv:cgd4_1170  26S proteasome regulatory subunit S4 like AAA AT...  98.2    4e-20
  pfa:PF13_0063  26S proteasome regulatory subunit 7, putative; K...  97.1    1e-19
  tpv:TP01_0845  26S proteasome regulatory subunit 4; K03062 26S ...  97.1    1e-19
  bbo:BBOV_IV009290  23.m06008; 26S protease regulatory subunit 4...  96.7    1e-19
  tpv:TP04_0152  26S proteasome regulatory subunit; K03064 26S pr...  95.9    2e-19
  tgo:TGME49_067080  26S proteasome subunit 4, putative ; K03062 ...  95.9    2e-19
  sce:YDL007W  RPT2, YHS4, YTA5; One of six ATPases of the 19S re...  95.5    3e-19
  mmu:19179  Psmc1, AI325227, P26s4, S4; protease (prosome, macro...  95.5    3e-19
  hsa:5700  PSMC1, MGC24583, MGC8541, P26S4, S4, p56; proteasome ...  95.5    3e-19
  ath:AT1G53750  RPT1A; RPT1A (REGULATORY PARTICLE TRIPLE-A 1A); ...  94.7    5e-19
  sce:YKL145W  RPT1, CIM5, YTA3; One of six ATPases of the 19S re...  94.4    5e-19
  cel:C52E4.4  rpt-1; proteasome Regulatory Particle, ATPase-like...  94.4    6e-19
  mmu:19181  Psmc2; proteasome (prosome, macropain) 26S subunit, ...  94.0    7e-19
  xla:399327  psmc2, xMSS1; proteasome (prosome, macropain) 26S s...  94.0    8e-19
  tgo:TGME49_077500  26S proteasome AAA-ATPase subunit RPT1, puta...  94.0    8e-19
  dre:393941  psmc2, MGC63995, zgc:63995; proteasome (prosome, ma...  94.0    8e-19
  cpv:cgd6_4350  26S proteasome regulatory subunit 7 (RPT1)-like....  93.6    9e-19
  tgo:TGME49_061010  26S protease regulatory subunit 8, putative ...  93.6    9e-19
  bbo:BBOV_IV009940  23.m06337; 26S protease regulatory subunit 7...  93.6    1e-18
  xla:443908  psmc5, MGC53028, MGC80185, sug-1, sug1, tbp10; prot...  93.2    1e-18
  dre:445285  psmc5, wu:fa14g03, wu:fb23a11, zgc:92464; proteasom...  93.2    1e-18
  mmu:19184  Psmc5, mSUG1; protease (prosome, macropain) 26S subu...  93.2    1e-18
  tpv:TP01_0711  26S proteasome regulatory subunit 7; K03061 26S ...  93.2    1e-18
  hsa:5705  PSMC5, S8, SUG-1, SUG1, TBP10, TRIP1, p45, p45/SUG; p...  93.2    1e-18
  ath:AT2G20140  26S protease regulatory complex subunit 4, putat...  93.2    1e-18


> tgo:TGME49_073090  cell division protein 48, putative (EC:3.4.21.53); 
K13525 transitional endoplasmic reticulum ATPase
Length=811

 Score =  504 bits (1299),  Expect = 2e-142, Method: Compositional matrix adjust.
 Identities = 241/266 (90%), Positives = 254/266 (95%), Gaps = 5/266 (1%)

Query  93   AAANQQPKKKRSPNRLVVEEAINDDNSVVALNPSRMETLQIFRGDTVLLRGKMRHDTVCV  152
            A   ++ +KKRSPNRL+VEEAINDDNSVVALNP++ME LQIFRGDTVLL+GKMRHDTVCV
Sbjct  13   AEKKEESQKKRSPNRLIVEEAINDDNSVVALNPAKMEELQIFRGDTVLLKGKMRHDTVCV  72

Query  153  VLADQDLDEGKIRLNKVVRKNLRVRLGDIVHVSACADCPYGKRIHVLPLDDTIEGITGNL  212
            VLADQDLDEGKIRLNKVVRKNLRV+LGD+VHVSAC DCPYGKRIHVLPLDDTIEGITGNL
Sbjct  73   VLADQDLDEGKIRLNKVVRKNLRVKLGDMVHVSACPDCPYGKRIHVLPLDDTIEGITGNL  132

Query  213  FEIYLKPYFMEAYRPVRKNDLFLVRGGFRPVEFK-----VVGVDPGEFCIVAPDTVIHCE  267
            F+IYLKPYFMEAYRPVRK DLFLVRGGFRPVEFK     VVGVDPGEFCIVAPDTVIHCE
Sbjct  133  FDIYLKPYFMEAYRPVRKGDLFLVRGGFRPVEFKESLKIVVGVDPGEFCIVAPDTVIHCE  192

Query  268  GEPVKREEEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGP  327
            G+PVKREEEERLDE+GY+DIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGP
Sbjct  193  GDPVKREEEERLDEVGYDDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGP  252

Query  328  PGSGKTLIAKAVANETGAFFFLINGP  353
            PGSGKTLIAKAVANETGAFFFLINGP
Sbjct  253  PGSGKTLIAKAVANETGAFFFLINGP  278


 Score = 80.1 bits (196),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 0/92 (0%)

Query  262  TVIHCEGEPVKREEEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRG  321
            + + C      RE    +  + ++DIGG       ++EMI  P+ HP  ++  G+ P RG
Sbjct  460  SALQCCNPSSLRETVVEVPNVKWDDIGGLEDVKRNLQEMILYPIDHPEKYEKFGMSPSRG  519

Query  322  VLLYGPPGSGKTLIAKAVANETGAFFFLINGP  353
            VL YGPPG GKTL+AKAVA+E  A F  I GP
Sbjct  520  VLFYGPPGCGKTLLAKAVASECSANFVSIKGP  551


> cpv:cgd1_330  CDC48 like AAA ATPase ortholog ; K13525 transitional 
endoplasmic reticulum ATPase
Length=820

 Score =  452 bits (1162),  Expect = 1e-126, Method: Compositional matrix adjust.
 Identities = 209/268 (77%), Positives = 240/268 (89%), Gaps = 0/268 (0%)

Query  86   NKKADANAAANQQPKKKRSPNRLVVEEAINDDNSVVALNPSRMETLQIFRGDTVLLRGKM  145
            N  + AN  +  Q +KKR+PNRL+V++AINDDNSVV L+P++ME L++FRGDT+LL+GK 
Sbjct  25   NGDSSANNTSPGQIEKKRAPNRLLVDDAINDDNSVVCLSPAKMEELKLFRGDTILLKGKK  84

Query  146  RHDTVCVVLADQDLDEGKIRLNKVVRKNLRVRLGDIVHVSACADCPYGKRIHVLPLDDTI  205
            R DT+C+VL D DL+EGKIR+NKVVRKNLRV+LGD V V  C D PYGKRIHVLP DD +
Sbjct  85   RRDTICIVLVDPDLEEGKIRMNKVVRKNLRVKLGDTVSVLECGDVPYGKRIHVLPFDDCL  144

Query  206  EGITGNLFEIYLKPYFMEAYRPVRKNDLFLVRGGFRPVEFKVVGVDPGEFCIVAPDTVIH  265
            EGITGNLFE YLKPYF+EAYRPV+K D FLVRGGFRP+EFKVVGVDP E+CIVAPDTVIH
Sbjct  145  EGITGNLFETYLKPYFLEAYRPVKKGDAFLVRGGFRPIEFKVVGVDPEEYCIVAPDTVIH  204

Query  266  CEGEPVKREEEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLY  325
            CEG+P+KRE+EE++D+IGY+DIGGCRKQMAQIREMIELPLRHP LFK LGVKPPRGVLLY
Sbjct  205  CEGDPIKREDEEKMDDIGYDDIGGCRKQMAQIREMIELPLRHPGLFKALGVKPPRGVLLY  264

Query  326  GPPGSGKTLIAKAVANETGAFFFLINGP  353
            GPPGSGKTLIAKAVANETGAFFFLINGP
Sbjct  265  GPPGSGKTLIAKAVANETGAFFFLINGP  292


 Score = 81.6 bits (200),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 0/81 (0%)

Query  273  REEEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGK  332
            RE    +  I ++DIGG  +    ++EMI  P+ HP  F+  G+ P RGVL YGPPG GK
Sbjct  485  RETVVEVPNIKWDDIGGLEEVKRNLQEMILYPIEHPEKFERFGMSPSRGVLFYGPPGCGK  544

Query  333  TLIAKAVANETGAFFFLINGP  353
            TL+AKAVA+E  A F  + GP
Sbjct  545  TLLAKAVASECSANFISVKGP  565


> bbo:BBOV_IV008360  23.m05756; cell division control protein 48; 
K13525 transitional endoplasmic reticulum ATPase
Length=804

 Score =  424 bits (1091),  Expect = 2e-118, Method: Compositional matrix adjust.
 Identities = 207/291 (71%), Positives = 248/291 (85%), Gaps = 11/291 (3%)

Query  65   IPSGNTPAA-GQAGGAPAASAGNKKADANAAANQQPKKKRSPNRLVVEEAINDDNSVVAL  123
            + S N PAA G   G   AS G    D   AA     KK+  NRL+VEEAINDDNSVV+L
Sbjct  1    MASPNEPAALGDIEGRGVASDG----DGLDAA-----KKKYLNRLLVEEAINDDNSVVSL  51

Query  124  NPSRMETLQIFRGDTVLLRGKMRHDTVCVVLADQDLDEGKIRLNKVVRKNLRVRLGDIVH  183
            +P+R+E L +FRGDTV+L+GK RH TVC+VLAD+DLDEGK+R+NK+VRKNLRV LGD V 
Sbjct  52   HPNRIEELGLFRGDTVMLKGKKRHTTVCIVLADKDLDEGKVRMNKIVRKNLRVMLGDFVR  111

Query  184  VSACADCPYGKRIHVLPLDDTIEGITGN-LFEIYLKPYFMEAYRPVRKNDLFLVRGGFRP  242
            ++ C+D PYGK+I VLPLDDT+EG++ + LF++YLKPYF+E+YRPV+K DLFLVRG F+ 
Sbjct  112  IAPCSDVPYGKKIQVLPLDDTVEGLSRDALFDVYLKPYFLESYRPVKKGDLFLVRGAFKA  171

Query  243  VEFKVVGVDPGEFCIVAPDTVIHCEGEPVKREEEERLDEIGYEDIGGCRKQMAQIREMIE  302
            VEFKVV VDPGE+CIVAPDTVI+ EG+P+KR+EEE+LD++GY+DIGGCR+QMAQIREMIE
Sbjct  172  VEFKVVEVDPGEYCIVAPDTVIYHEGDPIKRDEEEKLDDVGYDDIGGCRRQMAQIREMIE  231

Query  303  LPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVANETGAFFFLINGP  353
            LPLRHP LFKTLGVKPPRGVLLYGPPGSGKTLIA+AVANETGA+FFLINGP
Sbjct  232  LPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTLIARAVANETGAYFFLINGP  282


 Score = 83.6 bits (205),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 0/81 (0%)

Query  273  REEEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGK  332
            RE    +  + ++DIGG       +REMI  P+ HP  F+  G+ P RGVL YGPPG GK
Sbjct  475  RETVVEIPNVKWDDIGGLESVKNSLREMILYPIEHPEKFEKFGMSPSRGVLFYGPPGCGK  534

Query  333  TLIAKAVANETGAFFFLINGP  353
            TL+AKAVA+E  A F  I GP
Sbjct  535  TLLAKAVASECSANFISIKGP  555


> ath:AT5G03340  cell division cycle protein 48, putative / CDC48, 
putative; K13525 transitional endoplasmic reticulum ATPase
Length=810

 Score =  424 bits (1091),  Expect = 2e-118, Method: Compositional matrix adjust.
 Identities = 194/274 (70%), Positives = 234/274 (85%), Gaps = 3/274 (1%)

Query  80   PAASAGNKKADANAAANQQPKKKRSPNRLVVEEAINDDNSVVALNPSRMETLQIFRGDTV  139
            P +S    K D + A  +   +K+SPNRLVV+EAINDDNSVV+L+P+ ME LQ+FRGDT+
Sbjct  5    PESSDSKTKKDFSTAILE---RKKSPNRLVVDEAINDDNSVVSLHPTTMEKLQLFRGDTI  61

Query  140  LLRGKMRHDTVCVVLADQDLDEGKIRLNKVVRKNLRVRLGDIVHVSACADCPYGKRIHVL  199
            L++GK R DTVC+ LAD+  +E KIR+NKVVR NLRVRLGD++ V  C D  YGKR+H+L
Sbjct  62   LIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVHIL  121

Query  200  PLDDTIEGITGNLFEIYLKPYFMEAYRPVRKNDLFLVRGGFRPVEFKVVGVDPGEFCIVA  259
            P+DDT+EG+TGNLF+ YLKPYF+EAYRPVRK DLFLVRGG R VEFKV+  DP E+C+VA
Sbjct  122  PVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVVA  181

Query  260  PDTVIHCEGEPVKREEEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPP  319
            PDT I CEGEPVKRE+EERLDE+GY+D+GG RKQMAQIRE++ELPLRHP LFK++GVKPP
Sbjct  182  PDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPP  241

Query  320  RGVLLYGPPGSGKTLIAKAVANETGAFFFLINGP  353
            +G+LLYGPPGSGKTLIA+AVANETGAFFF INGP
Sbjct  242  KGILLYGPPGSGKTLIARAVANETGAFFFCINGP  275


 Score = 82.4 bits (202),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 0/72 (0%)

Query  282  IGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVAN  341
            + +EDIGG      +++E ++ P+ HP  F+  G+ P +GVL YGPPG GKTL+AKA+AN
Sbjct  477  VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN  536

Query  342  ETGAFFFLINGP  353
            E  A F  + GP
Sbjct  537  ECQANFISVKGP  548


> ath:AT3G09840  CDC48; CDC48 (CELL DIVISION CYCLE 48); ATPase/ 
identical protein binding; K13525 transitional endoplasmic 
reticulum ATPase
Length=809

 Score =  423 bits (1087),  Expect = 5e-118, Method: Compositional matrix adjust.
 Identities = 195/277 (70%), Positives = 237/277 (85%), Gaps = 4/277 (1%)

Query  78   GAPAASAGNK-KADANAAANQQPKKKRSPNRLVVEEAINDDNSVVALNPSRMETLQIFRG  136
              PA S+ +K K D + A  +   +K+SPNRLVV+EAINDDNSVV+L+P+ ME LQ+FRG
Sbjct  2    STPAESSDSKSKKDFSTAILE---RKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRG  58

Query  137  DTVLLRGKMRHDTVCVVLADQDLDEGKIRLNKVVRKNLRVRLGDIVHVSACADCPYGKRI  196
            DT+L++GK R DTVC+ LAD+  +E KIR+NKVVR NLRVRLGD++ V  C D  YGKR+
Sbjct  59   DTILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRV  118

Query  197  HVLPLDDTIEGITGNLFEIYLKPYFMEAYRPVRKNDLFLVRGGFRPVEFKVVGVDPGEFC  256
            H+LP+DDT+EG+TGNLF+ YLKPYF+EAYRPVRK DLFLVRGG R VEFKV+  DP E+C
Sbjct  119  HILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYC  178

Query  257  IVAPDTVIHCEGEPVKREEEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGV  316
            +VAPDT I CEGEPVKRE+EERLD++GY+D+GG RKQMAQIRE++ELPLRHP LFK++GV
Sbjct  179  VVAPDTEIFCEGEPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV  238

Query  317  KPPRGVLLYGPPGSGKTLIAKAVANETGAFFFLINGP  353
            KPP+G+LLYGPPGSGKTLIA+AVANETGAFFF INGP
Sbjct  239  KPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGP  275


 Score = 80.1 bits (196),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 0/72 (0%)

Query  282  IGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVAN  341
            + + DIGG      +++E ++ P+ HP  F+  G+ P +GVL YGPPG GKTL+AKA+AN
Sbjct  477  VSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN  536

Query  342  ETGAFFFLINGP  353
            E  A F  + GP
Sbjct  537  ECQANFISVKGP  548


> ath:AT3G53230  cell division cycle protein 48, putative / CDC48, 
putative; K13525 transitional endoplasmic reticulum ATPase
Length=815

 Score =  417 bits (1073),  Expect = 2e-116, Method: Compositional matrix adjust.
 Identities = 189/275 (68%), Positives = 230/275 (83%), Gaps = 0/275 (0%)

Query  79   APAASAGNKKADANAAANQQPKKKRSPNRLVVEEAINDDNSVVALNPSRMETLQIFRGDT  138
            A  A + + K      +    +KK++ NRLVV+EAINDDNSVV+L+P  ME LQ+FRGDT
Sbjct  2    ANQAESSDSKGTKKDFSTAILEKKKAANRLVVDEAINDDNSVVSLHPDTMEKLQLFRGDT  61

Query  139  VLLRGKMRHDTVCVVLADQDLDEGKIRLNKVVRKNLRVRLGDIVHVSACADCPYGKRIHV  198
            +L++GK R DTVC+ LAD+  DE KIR+NKVVR NLRVRLGD++ V  C D  YG R+H+
Sbjct  62   ILIKGKKRKDTVCIALADETCDEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGNRVHI  121

Query  199  LPLDDTIEGITGNLFEIYLKPYFMEAYRPVRKNDLFLVRGGFRPVEFKVVGVDPGEFCIV  258
            LPLDDTIEG++GN+F+ YLKPYF+EAYRPVRK DLFLVRGG R +EFKV+  DP E+C+V
Sbjct  122  LPLDDTIEGVSGNIFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSIEFKVIETDPAEYCVV  181

Query  259  APDTVIHCEGEPVKREEEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKP  318
            APDT I CEGEP+KRE+EERLDE+GY+D+GG RKQMAQIRE++ELPLRHP LFK++GVKP
Sbjct  182  APDTEIFCEGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKP  241

Query  319  PRGVLLYGPPGSGKTLIAKAVANETGAFFFLINGP  353
            P+G+LLYGPPGSGKTLIA+AVANETGAFFF INGP
Sbjct  242  PKGILLYGPPGSGKTLIARAVANETGAFFFCINGP  276


 Score = 82.4 bits (202),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 0/72 (0%)

Query  282  IGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVAN  341
            + +EDIGG      +++E ++ P+ HP  F+  G+ P +GVL YGPPG GKTL+AKA+AN
Sbjct  478  VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN  537

Query  342  ETGAFFFLINGP  353
            E  A F  I GP
Sbjct  538  ECQANFISIKGP  549


> tpv:TP01_0937  cell division cycle protein 48; K13525 transitional 
endoplasmic reticulum ATPase
Length=811

 Score =  416 bits (1069),  Expect = 8e-116, Method: Compositional matrix adjust.
 Identities = 194/257 (75%), Positives = 228/257 (88%), Gaps = 1/257 (0%)

Query  98   QPKKKRSPNRLVVEEAINDDNSVVALNPSRMETLQIFRGDTVLLRGKMRHDTVCVVLADQ  157
            + K++R  NRL+VE+A+NDDNSVVALNP R+E L +FRGDT+LLRGK R  TVC+VLAD 
Sbjct  31   EQKERRYLNRLLVEDALNDDNSVVALNPRRIEELGLFRGDTILLRGKKRRSTVCIVLADN  90

Query  158  DLDEGKIRLNKVVRKNLRVRLGDIVHVSACADCPYGKRIHVLPLDDTIEGITG-NLFEIY  216
            DLDE K R+NK+VRKNLRV LGD V VS C D PYGK+I VLP+DDT+EG++  +LF +Y
Sbjct  91   DLDETKARMNKIVRKNLRVMLGDFVRVSPCPDVPYGKKIQVLPIDDTVEGLSKESLFNVY  150

Query  217  LKPYFMEAYRPVRKNDLFLVRGGFRPVEFKVVGVDPGEFCIVAPDTVIHCEGEPVKREEE  276
            LKPYF+E+YRPV+K DLFLVRG F+ VEFKVV VDPGE+CIVAPDT+I  EG+P+KRE+E
Sbjct  151  LKPYFLESYRPVKKGDLFLVRGAFKAVEFKVVEVDPGEYCIVAPDTIIFHEGDPIKREDE  210

Query  277  ERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIA  336
            E+LD++GY+DIGGCR+QMAQIREMIELPLRHP LFKTLGVKPPRGVLLYGPPGSGKTLIA
Sbjct  211  EKLDDVGYDDIGGCRRQMAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTLIA  270

Query  337  KAVANETGAFFFLINGP  353
            +AVANETGAFFFLINGP
Sbjct  271  RAVANETGAFFFLINGP  287


 Score = 85.5 bits (210),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 0/81 (0%)

Query  273  REEEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGK  332
            RE    +  + ++DIGG  +  A +REMI  P+ HP  F+  G+ P RGVL YGPPG GK
Sbjct  480  RETVVEIPNVKWDDIGGLEQVKASLREMILYPIEHPEKFEKFGMSPSRGVLFYGPPGCGK  539

Query  333  TLIAKAVANETGAFFFLINGP  353
            TL+AKAVA+E  A F  + GP
Sbjct  540  TLLAKAVASECSANFISVKGP  560


> pfa:PFF0940c  cell division cycle protein 48 homologue, putative; 
K13525 transitional endoplasmic reticulum ATPase
Length=828

 Score =  414 bits (1064),  Expect = 2e-115, Method: Compositional matrix adjust.
 Identities = 198/271 (73%), Positives = 234/271 (86%), Gaps = 4/271 (1%)

Query  86   NKKA--DANAAANQQPKKKRSPNRLVVEEAINDDNSVVALNPSRMETLQIFRGDTVLLRG  143
            +KKA  D N   N+ PKKK + +RL+VEEA NDDNSVVALN  RME L  FRGDT++++G
Sbjct  6    DKKALVDENNGENKVPKKK-NLSRLIVEEATNDDNSVVALNTKRMEELNFFRGDTIIIKG  64

Query  144  KMRHDTVCVVLADQDLDEGKIRLNKVVRKNLRVRLGDIVHVSACADCPYGKRIHVLPLDD  203
            K RH T+C++L D DLDEGKIR+NKV RKNLRV LGD+V+V +C + PYGK+I VLP+DD
Sbjct  65   KKRHSTICIILNDNDLDEGKIRINKVARKNLRVCLGDVVYVKSCPEIPYGKKIQVLPIDD  124

Query  204  TIEGITGN-LFEIYLKPYFMEAYRPVRKNDLFLVRGGFRPVEFKVVGVDPGEFCIVAPDT  262
            TIEG+  + LFEI+LKPYF E+YRPV+K DLFLVRGGF  VEFKVV VDP +FCIV+PDT
Sbjct  125  TIEGLAKDTLFEIFLKPYFNESYRPVKKGDLFLVRGGFMSVEFKVVEVDPDDFCIVSPDT  184

Query  263  VIHCEGEPVKREEEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGV  322
            VI+ EG+P+KR++EE+LDEIGY+DIGGC+KQ+AQIREMIELPLRHP LFKTLGVKPPRGV
Sbjct  185  VIYYEGDPIKRDDEEKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGV  244

Query  323  LLYGPPGSGKTLIAKAVANETGAFFFLINGP  353
            LLYGPPGSGKT IA+AVANETGAFFFLINGP
Sbjct  245  LLYGPPGSGKTCIARAVANETGAFFFLINGP  275


 Score = 83.2 bits (204),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 0/72 (0%)

Query  282  IGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVAN  341
            + ++DIGG  +  + +REMI  P+ HP  F+  G+ P RGVL YGPPG GKTL+AKAVA+
Sbjct  477  VKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVAS  536

Query  342  ETGAFFFLINGP  353
            E  A F  I GP
Sbjct  537  ECSANFVSIKGP  548


> xla:380491  vcp, MGC52611; valosin containing protein; K13525 
transitional endoplasmic reticulum ATPase
Length=805

 Score =  413 bits (1062),  Expect = 5e-115, Method: Compositional matrix adjust.
 Identities = 190/273 (69%), Positives = 233/273 (85%), Gaps = 3/273 (1%)

Query  82   ASAGNKKADANAAANQQPKKKRSPNRLVVEEAINDDNSVVALNPSRMETLQIFRGDTVLL  141
            AS  + K+D  + A    K+K  PNRL+V+E+IN+DNSVV+L+ ++M+ LQ+FRGDTVLL
Sbjct  2    ASGSDTKSDDLSTAIL--KQKSRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLL  59

Query  142  RGKMRHDTVCVVLADQDLDEGKIRLNKVVRKNLRVRLGDIVHVSACADCPYGKRIHVLPL  201
            +GK R + VC+VL+D    + KIR+N+VVR NLRVRLGD++ +  C D  YGKR+HVLP+
Sbjct  60   KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRVHVLPI  119

Query  202  DDTIEGITGNLFEIYLKPYFMEAYRPVRKNDLFLVRGGFRPVEFKVVGVDPGEFCIVAPD  261
            DDT+EGITGNLFE+YLKPYF+EAYRP+RK D+FLVRGG R VEFKVV  DP  +CIVAPD
Sbjct  120  DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD  179

Query  262  TVIHCEGEPVKRE-EEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPR  320
            TVIHCEGEP+KRE EEE L+E+GY+DIGGCRKQ+AQI+EM+ELPLRHP LFK +GVKPPR
Sbjct  180  TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR  239

Query  321  GVLLYGPPGSGKTLIAKAVANETGAFFFLINGP  353
            G+LLYGPPG+GKTLIA+AVANETGAFFFLINGP
Sbjct  240  GILLYGPPGTGKTLIARAVANETGAFFFLINGP  272


 Score = 82.0 bits (201),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 0/73 (0%)

Query  281  EIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVA  340
            ++ +EDIGG      +++E+++ P+ HP  F   G+ P +GVL YGPPG GKTL+AKA+A
Sbjct  473  QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIA  532

Query  341  NETGAFFFLINGP  353
            NE  A F  I GP
Sbjct  533  NECQANFISIKGP  545


> mmu:269523  Vcp, 3110001E05, CDC48, p97, p97/VCP; valosin containing 
protein; K13525 transitional endoplasmic reticulum ATPase
Length=806

 Score =  413 bits (1061),  Expect = 7e-115, Method: Compositional matrix adjust.
 Identities = 192/273 (70%), Positives = 231/273 (84%), Gaps = 3/273 (1%)

Query  82   ASAGNKKADANAAANQQPKKKRSPNRLVVEEAINDDNSVVALNPSRMETLQIFRGDTVLL  141
            AS  + K D  + A    K+K  PNRL+V+EAIN+DNSVV+L+  +M+ LQ+FRGDTVLL
Sbjct  2    ASGADSKGDDLSTAIL--KQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLL  59

Query  142  RGKMRHDTVCVVLADQDLDEGKIRLNKVVRKNLRVRLGDIVHVSACADCPYGKRIHVLPL  201
            +GK R + VC+VL+D    + KIR+N+VVR NLRVRLGD++ +  C D  YGKRIHVLP+
Sbjct  60   KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI  119

Query  202  DDTIEGITGNLFEIYLKPYFMEAYRPVRKNDLFLVRGGFRPVEFKVVGVDPGEFCIVAPD  261
            DDT+EGITGNLFE+YLKPYF+EAYRP+RK D+FLVRGG R VEFKVV  DP  +CIVAPD
Sbjct  120  DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD  179

Query  262  TVIHCEGEPVKRE-EEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPR  320
            TVIHCEGEP+KRE EEE L+E+GY+DIGGCRKQ+AQI+EM+ELPLRHP LFK +GVKPPR
Sbjct  180  TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR  239

Query  321  GVLLYGPPGSGKTLIAKAVANETGAFFFLINGP  353
            G+LLYGPPG+GKTLIA+AVANETGAFFFLINGP
Sbjct  240  GILLYGPPGTGKTLIARAVANETGAFFFLINGP  272


 Score = 82.0 bits (201),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 0/81 (0%)

Query  273  REEEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGK  332
            RE    + ++ +EDIGG      +++E+++ P+ HP  F   G+ P +GVL YGPPG GK
Sbjct  465  RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK  524

Query  333  TLIAKAVANETGAFFFLINGP  353
            TL+AKA+ANE  A F  I GP
Sbjct  525  TLLAKAIANECQANFISIKGP  545


> hsa:7415  VCP, IBMPFD, MGC131997, MGC148092, MGC8560, TERA, p97; 
valosin containing protein; K13525 transitional endoplasmic 
reticulum ATPase
Length=806

 Score =  413 bits (1061),  Expect = 7e-115, Method: Compositional matrix adjust.
 Identities = 192/273 (70%), Positives = 231/273 (84%), Gaps = 3/273 (1%)

Query  82   ASAGNKKADANAAANQQPKKKRSPNRLVVEEAINDDNSVVALNPSRMETLQIFRGDTVLL  141
            AS  + K D  + A    K+K  PNRL+V+EAIN+DNSVV+L+  +M+ LQ+FRGDTVLL
Sbjct  2    ASGADSKGDDLSTAIL--KQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLL  59

Query  142  RGKMRHDTVCVVLADQDLDEGKIRLNKVVRKNLRVRLGDIVHVSACADCPYGKRIHVLPL  201
            +GK R + VC+VL+D    + KIR+N+VVR NLRVRLGD++ +  C D  YGKRIHVLP+
Sbjct  60   KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI  119

Query  202  DDTIEGITGNLFEIYLKPYFMEAYRPVRKNDLFLVRGGFRPVEFKVVGVDPGEFCIVAPD  261
            DDT+EGITGNLFE+YLKPYF+EAYRP+RK D+FLVRGG R VEFKVV  DP  +CIVAPD
Sbjct  120  DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD  179

Query  262  TVIHCEGEPVKRE-EEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPR  320
            TVIHCEGEP+KRE EEE L+E+GY+DIGGCRKQ+AQI+EM+ELPLRHP LFK +GVKPPR
Sbjct  180  TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR  239

Query  321  GVLLYGPPGSGKTLIAKAVANETGAFFFLINGP  353
            G+LLYGPPG+GKTLIA+AVANETGAFFFLINGP
Sbjct  240  GILLYGPPGTGKTLIARAVANETGAFFFLINGP  272


 Score = 82.0 bits (201),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 0/81 (0%)

Query  273  REEEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGK  332
            RE    + ++ +EDIGG      +++E+++ P+ HP  F   G+ P +GVL YGPPG GK
Sbjct  465  RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK  524

Query  333  TLIAKAVANETGAFFFLINGP  353
            TL+AKA+ANE  A F  I GP
Sbjct  525  TLLAKAIANECQANFISIKGP  545


> dre:327197  vcp, CDC48, wu:fd16d05, wu:fj63d11; valosin containing 
protein; K13525 transitional endoplasmic reticulum ATPase
Length=806

 Score =  412 bits (1059),  Expect = 1e-114, Method: Compositional matrix adjust.
 Identities = 191/273 (69%), Positives = 232/273 (84%), Gaps = 3/273 (1%)

Query  82   ASAGNKKADANAAANQQPKKKRSPNRLVVEEAINDDNSVVALNPSRMETLQIFRGDTVLL  141
            AS G  K D  + A    K+K  PNRL+V+E+IN+DNSVV+L+ ++M+ LQ+FRGDTVLL
Sbjct  2    ASGGESKNDDLSTAIL--KQKNRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLL  59

Query  142  RGKMRHDTVCVVLADQDLDEGKIRLNKVVRKNLRVRLGDIVHVSACADCPYGKRIHVLPL  201
            +GK R +TVC+VL+D    + K+R+N+VVR NLRVRLGD++ +  C D  YGKRIHVLP+
Sbjct  60   KGKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI  119

Query  202  DDTIEGITGNLFEIYLKPYFMEAYRPVRKNDLFLVRGGFRPVEFKVVGVDPGEFCIVAPD  261
            DDT+EGITGNLFE+YLKPYF+EAYRP+RK D+FLVRGG R VEFKVV  DP  +CIVAPD
Sbjct  120  DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD  179

Query  262  TVIHCEGEPVKRE-EEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPR  320
            TVIHCEGEP+KRE EEE L+E+GY+DIGG RKQ+AQI+EM+ELPLRHP LFK +GVKPPR
Sbjct  180  TVIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPR  239

Query  321  GVLLYGPPGSGKTLIAKAVANETGAFFFLINGP  353
            G+LLYGPPG+GKTLIA+AVANETGAFFFLINGP
Sbjct  240  GILLYGPPGTGKTLIARAVANETGAFFFLINGP  272


 Score = 81.6 bits (200),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 0/72 (0%)

Query  282  IGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVAN  341
            I +EDIGG      +++E+++ P+ HP  F   G+ P +GVL YGPPG GKTL+AKA+AN
Sbjct  474  ITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN  533

Query  342  ETGAFFFLINGP  353
            E  A F  I GP
Sbjct  534  ECQANFISIKGP  545


> dre:563679  MGC136908; zgc:136908
Length=805

 Score =  396 bits (1017),  Expect = 7e-110, Method: Compositional matrix adjust.
 Identities = 184/275 (66%), Positives = 226/275 (82%), Gaps = 3/275 (1%)

Query  80   PAASAGNKKADANAAANQQPKKKRSPNRLVVEEAINDDNSVVALNPSRMETLQIFRGDTV  139
            PA+ A + K +  + A    K+K  PNRL+V+EA N+DNS+V L+  +ME LQ+FRGDTV
Sbjct  2    PASGASDPKTEDFSTAIL--KQKIRPNRLIVDEATNEDNSIVCLSQVKMEELQLFRGDTV  59

Query  140  LLRGKMRHDTVCVVLADQDLDEGKIRLNKVVRKNLRVRLGDIVHVSACADCPYGKRIHVL  199
            +LRG+ R  TVC+VL D      ++R+N+V R NLRVRLGD++ +  C D  YGKRIHVL
Sbjct  60   VLRGRKRRQTVCIVLTDDTCGNERVRMNRVTRNNLRVRLGDVISIHPCPDVKYGKRIHVL  119

Query  200  PLDDTIEGITGNLFEIYLKPYFMEAYRPVRKNDLFLVRGGFRPVEFKVVGVDPGEFCIVA  259
            P+DDTIEG+TGNLF+++LKPYF+EAYRPV K D+FLVRGG R VEFKVV  DP   CIVA
Sbjct  120  PIDDTIEGLTGNLFDVFLKPYFLEAYRPVHKGDIFLVRGGMRAVEFKVVETDPTPHCIVA  179

Query  260  PDTVIHCEGEPVKRE-EEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKP  318
            PDT+IHCEGEP+KRE EEE L++IGY+DIGGCRKQ+AQI+EM+ELPLRHP LFK +GVKP
Sbjct  180  PDTIIHCEGEPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKP  239

Query  319  PRGVLLYGPPGSGKTLIAKAVANETGAFFFLINGP  353
            PRG+LLYGPPG+GKTL+A+AVANETGAFFFLINGP
Sbjct  240  PRGILLYGPPGTGKTLVARAVANETGAFFFLINGP  274


 Score = 80.5 bits (197),  Expect = 9e-15, Method: Compositional matrix adjust.
 Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 0/81 (0%)

Query  273  REEEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGK  332
            RE    +  + +EDIGG  +   +++E+++ P+ +P  F   G+ P RGVL YGPPG GK
Sbjct  467  RETVVEVPHVNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGK  526

Query  333  TLIAKAVANETGAFFFLINGP  353
            TL+AKA+ANE  A F  I GP
Sbjct  527  TLLAKAIANECQANFVSIKGP  547


> sce:YDL126C  CDC48; ATPase in ER, nuclear membrane and cytosol 
with homology to mammalian p97; in a complex with Npl4p and 
Ufd1p participates in retrotranslocation of ubiquitinated 
proteins from the ER into the cytosol for degradation by the 
proteasome; K13525 transitional endoplasmic reticulum ATPase
Length=835

 Score =  382 bits (980),  Expect = 1e-105, Method: Compositional matrix adjust.
 Identities = 171/255 (67%), Positives = 217/255 (85%), Gaps = 1/255 (0%)

Query  100  KKKRSPNRLVVEEAINDDNSVVALNPSRMETLQIFRGDTVLLRGKMRHDTVCVVLADQDL  159
            ++K+  N L+V++AINDDNSV+A+N + M+ L++FRGDTVL++GK R DTV +VL D +L
Sbjct  28   RRKKKDNMLLVDDAINDDNSVIAINSNTMDKLELFRGDTVLVKGKKRKDTVLIVLIDDEL  87

Query  160  DEGKIRLNKVVRKNLRVRLGDIVHVSACADCPYGKRIHVLPLDDTIEGITGNLFEIYLKP  219
            ++G  R+N+VVR NLR+RLGD+V +  C D  Y  RI VLP+ DTIEGITGNLF+++LKP
Sbjct  88   EDGACRINRVVRNNLRIRLGDLVTIHPCPDIKYATRISVLPIADTIEGITGNLFDVFLKP  147

Query  220  YFMEAYRPVRKNDLFLVRGGFRPVEFKVVGVDPGEFCIVAPDTVIHCEGEPVKREEEE-R  278
            YF+EAYRPVRK D F+VRGG R VEFKVV V+P E+ +VA DT+IH EGEP+ RE+EE  
Sbjct  148  YFVEAYRPVRKGDHFVVRGGMRQVEFKVVDVEPEEYAVVAQDTIIHWEGEPINREDEENN  207

Query  279  LDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKA  338
            ++E+GY+DIGGCRKQMAQIREM+ELPLRHP LFK +G+KPPRGVL+YGPPG+GKTL+A+A
Sbjct  208  MNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARA  267

Query  339  VANETGAFFFLINGP  353
            VANETGAFFFLINGP
Sbjct  268  VANETGAFFFLINGP  282


 Score = 79.7 bits (195),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 0/72 (0%)

Query  282  IGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVAN  341
            + ++D+GG  +   +++E +E P+ HP  +   G+ P +GVL YGPPG+GKTL+AKAVA 
Sbjct  484  VTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVAT  543

Query  342  ETGAFFFLINGP  353
            E  A F  + GP
Sbjct  544  EVSANFISVKGP  555


> cel:C06A1.1  cdc-48.1; Cell Division Cycle related family member 
(cdc-48.1); K13525 transitional endoplasmic reticulum ATPase
Length=809

 Score =  353 bits (906),  Expect = 6e-97, Method: Compositional matrix adjust.
 Identities = 155/255 (60%), Positives = 212/255 (83%), Gaps = 1/255 (0%)

Query  100  KKKRSPNRLVVEEAINDDNSVVALNPSRMETLQIFRGDTVLLRGKMRHDTVCVVLADQDL  159
            K K  PNRL+V+++  DDNSV+A++ ++M+ L +FRGD V+L+GK R ++V ++++D+  
Sbjct  24   KDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKESVAIIVSDESC  83

Query  160  DEGKIRLNKVVRKNLRVRLGDIVHVSACADCPYGKRIHVLPLDDTIEGITGNLFEIYLKP  219
               K+R+N+VVR NLR+RLGD+V ++   +  YG RIHVLP+DDTIEG+TGNLF+++LKP
Sbjct  84   PNEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRIHVLPIDDTIEGLTGNLFDVFLKP  143

Query  220  YFMEAYRPVRKNDLFLVRGGFRPVEFKVVGVDPGEFCIVAPDTVIHCEGEPVKREEEER-  278
            YF+EAYRP+ K D+F V+   R VEFKVV  +P   CIV+PDT+IH EG+P+KREEEE  
Sbjct  144  YFLEAYRPLHKGDIFTVQAAMRTVEFKVVETEPAPACIVSPDTMIHYEGDPIKREEEEES  203

Query  279  LDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKA  338
            +++IGY+D+GG RKQ+AQI+EM+ELPLRHP LFK +G+KPPRG+LL+GPPG+GKTLIA+A
Sbjct  204  MNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARA  263

Query  339  VANETGAFFFLINGP  353
            VANETG+FFFLINGP
Sbjct  264  VANETGSFFFLINGP  278


 Score = 80.5 bits (197),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 48/70 (68%), Gaps = 0/70 (0%)

Query  284  YEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVANET  343
            + DIGG +    +++E+++ P+ HP  +   G++P RGVL YGPPG GKTL+AKA+ANE 
Sbjct  482  WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC  541

Query  344  GAFFFLINGP  353
             A F  I GP
Sbjct  542  QANFISIKGP  551


> cel:C41C4.8  cdc-48.2; Cell Division Cycle related family member 
(cdc-48.2); K13525 transitional endoplasmic reticulum ATPase
Length=810

 Score =  349 bits (896),  Expect = 7e-96, Method: Compositional matrix adjust.
 Identities = 165/255 (64%), Positives = 212/255 (83%), Gaps = 2/255 (0%)

Query  100  KKKRSPNRLVVEEAINDDNSVVALNPSRMETLQIFRGDTVLLRGKMRHDTVCVVLADQDL  159
            K K+ PNRL+++++ NDDNS+V L+ ++M+ L +FRGD+V+L+GK R +TV +VL   + 
Sbjct  24   KDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRETVSIVLNADNC  83

Query  160  DEGKIRLNKVVRKNLRVRLGDIVHVSACADCPYGKRIHVLPLDDTIEGITGNLFEIYLKP  219
               KI++NKVVR NLR RLGD+V +S+ A   YGKR+HVLP+DDTIEG+TGNLF+++L+P
Sbjct  84   PNDKIKMNKVVRNNLRSRLGDVVSISS-AQLEYGKRVHVLPIDDTIEGLTGNLFDVFLRP  142

Query  220  YFMEAYRPVRKNDLFLVRGGFRPVEFKVVGVDPGEFCIVAPDTVIHCEGEPVKREEEER-  278
            YF +AYRPV K D+F V+   R VEFKVV  DP   CIVAPDTVIH EG+P+KREEEE  
Sbjct  143  YFTDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGDPIKREEEEEA  202

Query  279  LDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKA  338
            L+E+GY+D+GG RKQ+AQI+EM+ELPLRHP LFK +GVKPPRG+LL+GPPG+GKTLIA+A
Sbjct  203  LNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARA  262

Query  339  VANETGAFFFLINGP  353
            VANETGAFFFLINGP
Sbjct  263  VANETGAFFFLINGP  277


 Score = 80.1 bits (196),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 48/70 (68%), Gaps = 0/70 (0%)

Query  284  YEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVANET  343
            + DIGG +    +++E+++ P+ HP  +   G++P RGVL YGPPG GKTL+AKA+ANE 
Sbjct  481  WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC  540

Query  344  GAFFFLINGP  353
             A F  I GP
Sbjct  541  QANFISIKGP  550


> tgo:TGME49_121640  cell division protein 48, putative ; K13525 
transitional endoplasmic reticulum ATPase
Length=963

 Score =  170 bits (430),  Expect = 8e-42, Method: Compositional matrix adjust.
 Identities = 103/279 (36%), Positives = 150/279 (53%), Gaps = 31/279 (11%)

Query  106  NRLVVEEAINDDNSVVALNPSRMETLQIFRGDTVLLRGKMRHDTVCVVLADQDLDEGKIR  165
            N  VV+ +   D SVV L+P  M  LQ+ RGD VLL G+ + +TV + + D+ L+   + 
Sbjct  164  NLFVVKGSHARDPSVVFLSPRDMAALQVQRGDVVLLSGRRKRETVAIAMPDRSLEARHVV  223

Query  166  LNKVVRKNLRVRLGDIVHVSACADCPYGKRIHVLPLDDTI----EGITGNL---------  212
            L+    KN+++   D + V+     P+ +R+ VLP  DT+    +G  G           
Sbjct  224  LHAHALKNIKLHAQDAIKVTPQRLLPHARRVFVLPFSDTLGDVRDGGAGRSEGRDRDASG  283

Query  213  ----FEIYLKPYFMEAYRPVRKNDLFLV---------RGGFRPVEFKVV-----GVDPGE  254
                 E     +F    RPV+  D F++          G    VE KV+     G D  E
Sbjct  284  EKPSVEAVATKFFRHTSRPVKVGDQFVLEFPVHAKGEHGATGKVEVKVMQIDTDGKDDQE  343

Query  255  FCIVAPDTVIHCEGEPVKREEEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTL  314
              +V   T + CEGEP+ R + +    I Y+D+GG +K++  IRE++ELPLR P +FK +
Sbjct  344  VALVDDATELICEGEPLDRAQFDASSMITYDDVGGLKKELNLIRELVELPLRFPEIFKQV  403

Query  315  GVKPPRGVLLYGPPGSGKTLIAKAVANETGAFFFLINGP  353
            GV+ PRGVLL+G  G GKTL+AKA+ANE GA F  +NGP
Sbjct  404  GVQTPRGVLLHGSSGCGKTLLAKAIANECGANFLTVNGP  442


 Score = 76.6 bits (187),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 0/81 (0%)

Query  273  REEEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGK  332
            RE    + ++ +EDIGG  +   ++ E ++ P+ H   F   G+ P +GVL +GPPG GK
Sbjct  635  RERHVEVPDVRWEDIGGLTEVKEELVETVQYPVEHGEKFHKFGLAPSKGVLFFGPPGCGK  694

Query  333  TLIAKAVANETGAFFFLINGP  353
            TL+AKAVANE  A F  + GP
Sbjct  695  TLLAKAVANECKANFISVKGP  715


> bbo:BBOV_IV001700  21.m02769; cell division cycle protein ATPase; 
K13525 transitional endoplasmic reticulum ATPase
Length=922

 Score =  165 bits (417),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 176/339 (51%), Gaps = 48/339 (14%)

Query  63   EEIPSGNTPAAGQAGGAPAASAGNKKADANAAANQQPKKKRSPNRLVVEEAINDDNSV-V  121
            +++PSG  P + +    P     +     +   +Q+  +   PN  V+    + ++S+ +
Sbjct  91   DDLPSGGNPHSHEDSSEPTLPESDTVERISKGPSQRILEGLIPNLFVLSGVFDGNSSIEI  150

Query  122  ALNPSRMETLQIFRGDTVLLRGKMRHDTVCVVLADQDLDEGKIRLNKVVRKNLRVRLGDI  181
             +       L +  G+ V +RGK R DTVCVV  D ++ + ++ ++   R+NL++R GD+
Sbjct  151  RMGKEPANKLGVAEGNLVRVRGKKRCDTVCVVGIDPNITDNQVLIHSDTRRNLKLRTGDV  210

Query  182  VHVSACADCPYGKRIHVLPLDDTIEGITGNL----------------FEIYLKPYFMEAY  225
            + +   +D P  K + ++P +D++  I   +                 + + +   +   
Sbjct  211  MSIDLISDIPPAKLVKLMPFEDSVGPILAQMPQTLRHTFPKMLMKVILDFFSREIALGRR  270

Query  226  RPVRKNDLFLVRGGFRP--------------------VEFKVV----------GVDPGEF  255
            RPVR  D   ++  F+                     VE K++          G+   E 
Sbjct  271  RPVRLGDHMTLQLKFQDSTKSSLVLLPNDHNETNSFVVELKIMSIKSYKDDYRGIMDVES  330

Query  256  CIVAPDTVIHCEGEPVKREEEE-RLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTL  314
             +++ ++V+ C G  + RE+ +    E+GY++IGG  KQ+++IRE+IELPL HP ++K +
Sbjct  331  GLISGESVLDCSGPSLTREQHDASYGELGYDEIGGMDKQLSKIRELIELPLLHPEVYKAV  390

Query  315  GVKPPRGVLLYGPPGSGKTLIAKAVANETGAFFFLINGP  353
            G+ PP+GV+L+GPPG+GKTLIA+A+A+ETGA   +INGP
Sbjct  391  GISPPKGVILHGPPGTGKTLIARAIASETGAHCVVINGP  429


 Score = 77.8 bits (190),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 0/81 (0%)

Query  273  REEEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGK  332
            RE   ++ E  +EDIGG      ++ E ++ P+ HP  F+  G    +GVL YGPPG GK
Sbjct  624  RERRVQIPETTWEDIGGLEDVKKELIETVQYPVEHPEKFRKFGQASSKGVLFYGPPGCGK  683

Query  333  TLIAKAVANETGAFFFLINGP  353
            TL+AKA+A+E  A F  I GP
Sbjct  684  TLLAKAIAHECNANFISIKGP  704


> pfa:PF07_0047  cell division cycle ATPase, putative
Length=1229

 Score =  159 bits (401),  Expect = 2e-38, Method: Composition-based stats.
 Identities = 86/246 (34%), Positives = 146/246 (59%), Gaps = 7/246 (2%)

Query  115  NDDNSVVALNPSRMETLQIFRGDTVLLRGKMRHDTVCVVLADQDLDEGKIRLNKVVRKNL  174
            N DN  + ++  +M+ L I  G TVLL+GK + + + +   D+ L +  + ++  ++KNL
Sbjct  350  NLDNFDIYMSKEKMDELNINDGATVLLKGKKKREMLGIARLDRSLKKHYVVISFAMKKNL  409

Query  175  RVRLGDIVHVSACADCPYGKRIHVLPLDDTIEGITGNLFE-IYLKPYFMEAYRPVRKNDL  233
            R+   DI+ +    +    + + + P  DTI  ++    E   + PY   +Y+P+R N  
Sbjct  410  RLMHNDIIKIHPFMNAKRIRNVVLSPFSDTIPNLSREELEKAVIHPYLKNSYKPLRVNSN  469

Query  234  FLVRGGFRPVEFKVVGVDPGE-----FCIVAPDTVIHCEGEPVKREE-EERLDEIGYEDI  287
              +      +EFKV+ +   E     F  +   + +    E +KRE+ EE  D+I YED+
Sbjct  470  IYIYYKNNKIEFKVLKIISEESENEEFGCIGEHSQLTLAEEYLKREDYEENNDDITYEDL  529

Query  288  GGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVANETGAFF  347
            GG +KQ+ +IRE+IELPL++P +F ++G+  P+GVL++G PG+GKT IAKA+ANE+ A+ 
Sbjct  530  GGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYC  589

Query  348  FLINGP  353
            ++INGP
Sbjct  590  YIINGP  595


 Score = 74.7 bits (182),  Expect = 5e-13, Method: Composition-based stats.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 0/81 (0%)

Query  273   REEEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGK  332
             RE + ++  + + DIGG  +   Q++E I  PL +  L+        +G+LLYGPPG GK
Sbjct  922   RERQVQIPTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGK  981

Query  333   TLIAKAVANETGAFFFLINGP  353
             TL+AKA+ANE  A F  + GP
Sbjct  982   TLLAKAIANECKANFISVKGP  1002


> tpv:TP03_0490  cell division cycle protein 48; K13525 transitional 
endoplasmic reticulum ATPase
Length=954

 Score =  151 bits (381),  Expect = 5e-36, Method: Compositional matrix adjust.
 Identities = 98/280 (35%), Positives = 155/280 (55%), Gaps = 42/280 (15%)

Query  116  DDNSVVALNPSRMETLQIFRGDTVLLRGKMRHDTVCVVLADQDLDEGKIRLNKVVRKNLR  175
            + N  V +  ++   L +  GD + ++G+ R  TVC V   + + + ++  ++ +R+NLR
Sbjct  154  NSNVNVRIGKAQANKLSVMPGDLLKVKGRRRKVTVCGVDVTESITKNEVSFHEDLRRNLR  213

Query  176  VRLGDIVHVSACADCPYGKRIHVLPLDDTIEGI-----TGNLFEI--YLKPYFMEAY---  225
            +RLGD+V +      P  K +H+LP  DTIE +     T N  E+   +K    E +   
Sbjct  214  LRLGDVVFMEKINTVPEAKFVHILPFKDTIEPLIKQLNTQNTDEVRKVVKNVLYEYFSGE  273

Query  226  ------RPVRKNDLFLV--------------RGGFRPVEFKVVGVDP-----------GE  254
                  RPVR  D F +                 +  +EFK++ +              +
Sbjct  274  VSGGSGRPVRVGDHFTLCVKVTGPGTVKLSDDSDYLKLEFKILKIKAFSKQYADVLVDSD  333

Query  255  FCIVAPDTVIHCEGEPVKRE-EEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKT  313
              ++  ++VI   G  + RE  ++   E+GY+DIGG  KQ+++IRE+IELPL HP LFKT
Sbjct  334  VGLIVGESVIDSSGNYLTRENHDDSYGEVGYDDIGGMNKQLSKIRELIELPLLHPELFKT  393

Query  314  LGVKPPRGVLLYGPPGSGKTLIAKAVANETGAFFFLINGP  353
            +G+ PP+GV+L+GPPGSGKTL+A+A+ANETGA  ++INGP
Sbjct  394  VGINPPKGVILHGPPGSGKTLVARAIANETGAKCYVINGP  433


 Score = 69.7 bits (169),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 0/81 (0%)

Query  273  REEEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGK  332
            RE    + E  + DIGG      ++ E I+ PL+ P  F   G    +GVL YGPPG GK
Sbjct  662  RERIVEIPETTWNDIGGLESVKNELIETIQYPLQFPEKFVKYGQSCNKGVLFYGPPGCGK  721

Query  333  TLIAKAVANETGAFFFLINGP  353
            TL+AKA+A+E  A F  I GP
Sbjct  722  TLLAKAIAHECNANFISIKGP  742


> mmu:57815  Spata5, 2510048F20Rik, C78064, Spaf; spermatogenesis 
associated 5; K14575 AAA family ATPase
Length=893

 Score =  104 bits (259),  Expect = 7e-22, Method: Compositional matrix adjust.
 Identities = 48/99 (48%), Positives = 68/99 (68%), Gaps = 0/99 (0%)

Query  255  FCIVAPDTVIHCEGEPVKREEEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTL  314
            F  ++  T I+        +E++   ++ Y+ IGG   Q+  IRE+IELPL+ P LFK+ 
Sbjct  323  FYFISSTTRINLRKICTNSKEQDSQFKVTYDMIGGLNSQLKAIREIIELPLKQPELFKSY  382

Query  315  GVKPPRGVLLYGPPGSGKTLIAKAVANETGAFFFLINGP  353
            G+  PRG+LLYGPPG+GKT+IA+AVANE GA+  +INGP
Sbjct  383  GIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGP  421


 Score = 87.8 bits (216),  Expect = 6e-17, Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 0/72 (0%)

Query  282  IGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVAN  341
            + + DIGG      ++++ +E PL+HP  F  +G++PP+GVLLYGPPG  KT+IAKA+AN
Sbjct  624  VSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALAN  683

Query  342  ETGAFFFLINGP  353
            E+G  F  I GP
Sbjct  684  ESGLNFLAIKGP  695


> hsa:166378  SPATA5, AFG2, SPAF; spermatogenesis associated 5; 
K14575 AAA family ATPase
Length=893

 Score =  103 bits (257),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 48/99 (48%), Positives = 68/99 (68%), Gaps = 0/99 (0%)

Query  255  FCIVAPDTVIHCEGEPVKREEEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTL  314
            F  ++  T ++        +E++   ++ Y+ IGG   Q+  IRE+IELPL+ P LFK+ 
Sbjct  323  FYFISSTTRVNFTEIDKNSKEQDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKSY  382

Query  315  GVKPPRGVLLYGPPGSGKTLIAKAVANETGAFFFLINGP  353
            G+  PRGVLLYGPPG+GKT+IA+AVANE GA+  +INGP
Sbjct  383  GIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGP  421


 Score = 85.9 bits (211),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 0/72 (0%)

Query  282  IGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVAN  341
            + + DIGG      ++ + +E PL+HP  F  +G++PP+GVLLYGPPG  KT+IAKA+AN
Sbjct  624  VSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALAN  683

Query  342  ETGAFFFLINGP  353
            E+G  F  I GP
Sbjct  684  ESGLNFLAIKGP  695


> ath:AT5G58290  RPT3; RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE 
3); ATPase; K03063 26S proteasome regulatory subunit T3
Length=408

 Score = 99.0 bits (245),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 43/72 (59%), Positives = 54/72 (75%), Gaps = 0/72 (0%)

Query  281  EIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVA  340
            ++ Y DIGGC  Q  +IRE +ELPL H  L+K +G+ PPRGVLLYGPPG+GKT++AKAVA
Sbjct  151  DVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVA  210

Query  341  NETGAFFFLING  352
            N T A F  + G
Sbjct  211  NHTTAAFIRVVG  222


> ath:AT1G53780  ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ 
nucleotide binding / peptidyl-prolyl cis-trans 
isomerase; K03061 26S proteasome regulatory subunit T1
Length=598

 Score = 99.0 bits (245),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 55/69 (79%), Gaps = 0/69 (0%)

Query  284  YEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVANET  343
            Y DIGGC++Q+ +IRE++ELP+ HP  F  LG+ PP+GVL YGPPGSGKTL+A+AVAN T
Sbjct  338  YSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRT  397

Query  344  GAFFFLING  352
            GA F  + G
Sbjct  398  GACFIRVVG  406


> pfa:PF10_0081  26S proteasome regulatory subunit 4, putative; 
K03062 26S proteasome regulatory subunit T2
Length=448

 Score = 98.6 bits (244),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 55/69 (79%), Gaps = 0/69 (0%)

Query  284  YEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVANET  343
            Y DIGG   Q+ +I+E +ELPL HP L++ +G+KPP+GV+LYGPPG+GKTL+AKAVANET
Sbjct  192  YADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANET  251

Query  344  GAFFFLING  352
             A F  + G
Sbjct  252  SATFLRVVG  260


> cpv:cgd4_1170  26S proteasome regulatory subunit S4 like AAA 
ATpase ; K03062 26S proteasome regulatory subunit T2
Length=445

 Score = 98.2 bits (243),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 55/69 (79%), Gaps = 0/69 (0%)

Query  284  YEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVANET  343
            Y DIGG  +Q+ +I+E +E+PL HP L+  +G+KPP+GV+LYGPPG+GKTL+AKAVANET
Sbjct  189  YADIGGLEQQIQEIKEAVEIPLTHPELYDDIGIKPPKGVILYGPPGTGKTLLAKAVANET  248

Query  344  GAFFFLING  352
             A F  + G
Sbjct  249  SATFLRVVG  257


> pfa:PF13_0063  26S proteasome regulatory subunit 7, putative; 
K03061 26S proteasome regulatory subunit T1
Length=420

 Score = 97.1 bits (240),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 56/72 (77%), Gaps = 0/72 (0%)

Query  281  EIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVA  340
            +I Y DIGGC++Q+ ++RE++E+PL  P  F TLG+ PP+GVLLYGPPG+GKTL A+A+A
Sbjct  158  DITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIA  217

Query  341  NETGAFFFLING  352
            N T A F  + G
Sbjct  218  NRTDACFICVIG  229


> tpv:TP01_0845  26S proteasome regulatory subunit 4; K03062 26S 
proteasome regulatory subunit T2
Length=415

 Score = 97.1 bits (240),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 41/70 (58%), Positives = 55/70 (78%), Gaps = 0/70 (0%)

Query  283  GYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVANE  342
             Y+DIGG  +Q+ +I+E +ELPL  P L+  +G+KPP+GV+LYGPPG+GKTL+AKAVANE
Sbjct  158  SYDDIGGLEEQIQEIKEAVELPLTRPELYDDIGIKPPKGVILYGPPGTGKTLLAKAVANE  217

Query  343  TGAFFFLING  352
            T A F  + G
Sbjct  218  TSATFLRVVG  227


> bbo:BBOV_IV009290  23.m06008; 26S protease regulatory subunit 
4; K03062 26S proteasome regulatory subunit T2
Length=438

 Score = 96.7 bits (239),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 41/70 (58%), Positives = 55/70 (78%), Gaps = 0/70 (0%)

Query  283  GYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVANE  342
             Y DIGG   Q+ +I+E +ELPL HP L++ +G++PP+GV+LYGPPG+GKTL+AKAVANE
Sbjct  181  SYSDIGGLEDQIQEIKEAVELPLTHPELYEEVGIRPPKGVILYGPPGTGKTLLAKAVANE  240

Query  343  TGAFFFLING  352
            T A F  + G
Sbjct  241  TCATFLRVVG  250


> tpv:TP04_0152  26S proteasome regulatory subunit; K03064 26S 
proteasome regulatory subunit T4
Length=415

 Score = 95.9 bits (237),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 56/69 (81%), Gaps = 0/69 (0%)

Query  280  DEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAV  339
            D+  Y  IGG  KQ+ ++RE+IELPL++P LFK +G+KPP+GVLLYGPPG+GKTL+A+A+
Sbjct  154  DKDTYNSIGGLNKQIKEMREVIELPLKNPYLFKRIGIKPPKGVLLYGPPGTGKTLLARAL  213

Query  340  ANETGAFFF  348
            AN+ G  F 
Sbjct  214  ANDLGCNFL  222


> tgo:TGME49_067080  26S proteasome subunit 4, putative ; K03062 
26S proteasome regulatory subunit T2
Length=441

 Score = 95.9 bits (237),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 40/69 (57%), Positives = 52/69 (75%), Gaps = 0/69 (0%)

Query  284  YEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVANET  343
            Y DIGG  KQ+ +++E +E PL HP  F  +G+ PP+GV+LYGPPG+GKTL+AKAVANET
Sbjct  185  YADIGGLEKQIQEVKEAVEFPLTHPEFFDDIGISPPKGVILYGPPGTGKTLLAKAVANET  244

Query  344  GAFFFLING  352
             A F  + G
Sbjct  245  SATFLRVVG  253


> sce:YDL007W  RPT2, YHS4, YTA5; One of six ATPases of the 19S 
regulatory particle of the 26S proteasome involved in the degradation 
of ubiquitinated substrates; required for normal peptide 
hydrolysis by the core 20S particle; K03062 26S proteasome 
regulatory subunit T2
Length=437

 Score = 95.5 bits (236),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 0/69 (0%)

Query  284  YEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVANET  343
            Y DIGG   Q+ +I+E +ELPL HP L++ +G+KPP+GV+LYG PG+GKTL+AKAVAN+T
Sbjct  181  YSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT  240

Query  344  GAFFFLING  352
             A F  I G
Sbjct  241  SATFLRIVG  249


> mmu:19179  Psmc1, AI325227, P26s4, S4; protease (prosome, macropain) 
26S subunit, ATPase 1; K03062 26S proteasome regulatory 
subunit T2
Length=440

 Score = 95.5 bits (236),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 40/69 (57%), Positives = 54/69 (78%), Gaps = 0/69 (0%)

Query  284  YEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVANET  343
            Y DIGG   Q+ +I+E +ELPL HP  ++ +G+KPP+GV+LYGPPG+GKTL+AKAVAN+T
Sbjct  184  YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT  243

Query  344  GAFFFLING  352
             A F  + G
Sbjct  244  SATFLRVVG  252


> hsa:5700  PSMC1, MGC24583, MGC8541, P26S4, S4, p56; proteasome 
(prosome, macropain) 26S subunit, ATPase, 1; K03062 26S proteasome 
regulatory subunit T2
Length=440

 Score = 95.5 bits (236),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 40/69 (57%), Positives = 54/69 (78%), Gaps = 0/69 (0%)

Query  284  YEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVANET  343
            Y DIGG   Q+ +I+E +ELPL HP  ++ +G+KPP+GV+LYGPPG+GKTL+AKAVAN+T
Sbjct  184  YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT  243

Query  344  GAFFFLING  352
             A F  + G
Sbjct  244  SATFLRVVG  252


> ath:AT1G53750  RPT1A; RPT1A (REGULATORY PARTICLE TRIPLE-A 1A); 
ATPase; K03061 26S proteasome regulatory subunit T1
Length=426

 Score = 94.7 bits (234),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 56/72 (77%), Gaps = 0/72 (0%)

Query  281  EIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVA  340
            ++ Y D+GGC++Q+ ++RE++ELP+ HP  F  LG+ PP+GVL YGPPG+GKTL+A+AVA
Sbjct  164  DVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVA  223

Query  341  NETGAFFFLING  352
            N T A F  + G
Sbjct  224  NRTDACFIRVIG  235


> sce:YKL145W  RPT1, CIM5, YTA3; One of six ATPases of the 19S 
regulatory particle of the 26S proteasome involved in the degradation 
of ubiquitinated substrates; required for optimal 
CDC20 transcription; interacts with Rpn12p and the E3 ubiquitin-protein 
ligase Ubr1p; K03061 26S proteasome regulatory subunit 
T1
Length=467

 Score = 94.4 bits (233),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 55/72 (76%), Gaps = 0/72 (0%)

Query  281  EIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVA  340
            ++ Y D+GGC+ Q+ ++RE++ELPL  P  F TLG+ PP+G+LLYGPPG+GKTL A+AVA
Sbjct  205  DVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVA  264

Query  341  NETGAFFFLING  352
            N T A F  + G
Sbjct  265  NRTDATFIRVIG  276


> cel:C52E4.4  rpt-1; proteasome Regulatory Particle, ATPase-like 
family member (rpt-1); K03061 26S proteasome regulatory subunit 
T1
Length=435

 Score = 94.4 bits (233),  Expect = 6e-19, Method: Compositional matrix adjust.
 Identities = 48/106 (45%), Positives = 70/106 (66%), Gaps = 4/106 (3%)

Query  248  VGVDPGEFCIVAPDTVIHCEGEP-VKREEEERLDEIGYEDIGGCRKQMAQIREMIELPLR  306
            VGVD  ++ I  P   +  + +P V   + E   ++ Y D+GGC+ Q+ ++RE++E PL 
Sbjct  142  VGVDRNKYQIHLP---LPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLL  198

Query  307  HPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVANETGAFFFLING  352
            HP  +  LG++PP+GVLLYGPPG+GKTL A+AVAN T A F  + G
Sbjct  199  HPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIG  244


> mmu:19181  Psmc2; proteasome (prosome, macropain) 26S subunit, 
ATPase 2; K03061 26S proteasome regulatory subunit T1
Length=475

 Score = 94.0 bits (232),  Expect = 7e-19, Method: Compositional matrix adjust.
 Identities = 48/113 (42%), Positives = 70/113 (61%), Gaps = 18/113 (15%)

Query  248  VGVDPGEFCIVAP--------DTVIHCEGEPVKREEEERLDEIGYEDIGGCRKQMAQIRE  299
            VGVD  ++ I  P         T++  E +P          ++ Y D+GGC++Q+ ++RE
Sbjct  182  VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKP----------DVTYSDVGGCKEQIEKLRE  231

Query  300  MIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVANETGAFFFLING  352
            ++E PL HP  F  LG++PP+GVLL+GPPG+GKTL A+AVAN T A F  + G
Sbjct  232  VVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIG  284


> xla:399327  psmc2, xMSS1; proteasome (prosome, macropain) 26S 
subunit, ATPase, 2; K03061 26S proteasome regulatory subunit 
T1
Length=433

 Score = 94.0 bits (232),  Expect = 8e-19, Method: Compositional matrix adjust.
 Identities = 48/113 (42%), Positives = 70/113 (61%), Gaps = 18/113 (15%)

Query  248  VGVDPGEFCIVAP--------DTVIHCEGEPVKREEEERLDEIGYEDIGGCRKQMAQIRE  299
            VGVD  ++ I  P         T++  E +P          ++ Y D+GGC++Q+ ++RE
Sbjct  140  VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKP----------DVTYSDVGGCKEQIEKLRE  189

Query  300  MIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVANETGAFFFLING  352
            ++E PL HP  F  LG++PP+GVLL+GPPG+GKTL A+AVAN T A F  + G
Sbjct  190  VVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIG  242


> tgo:TGME49_077500  26S proteasome AAA-ATPase subunit RPT1, putative 
; K03061 26S proteasome regulatory subunit T1
Length=476

 Score = 94.0 bits (232),  Expect = 8e-19, Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 59/77 (76%), Gaps = 1/77 (1%)

Query  276  EERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLI  335
            EE+ D + Y D+GG ++Q+ ++RE++ELPL HP  F +LG+ PP+GVLLYGPPG+GKTL 
Sbjct  207  EEKPD-VTYNDVGGAKEQLEKLREVLELPLLHPERFLSLGIDPPKGVLLYGPPGTGKTLT  265

Query  336  AKAVANETGAFFFLING  352
            A+AVAN T A F  + G
Sbjct  266  ARAVANRTDACFICVIG  282


> dre:393941  psmc2, MGC63995, zgc:63995; proteasome (prosome, 
macropain) 26S subunit, ATPase 2; K03061 26S proteasome regulatory 
subunit T1
Length=433

 Score = 94.0 bits (232),  Expect = 8e-19, Method: Compositional matrix adjust.
 Identities = 48/113 (42%), Positives = 70/113 (61%), Gaps = 18/113 (15%)

Query  248  VGVDPGEFCIVAP--------DTVIHCEGEPVKREEEERLDEIGYEDIGGCRKQMAQIRE  299
            VGVD  ++ I  P         T++  E +P          ++ Y D+GGC++Q+ ++RE
Sbjct  140  VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKP----------DVTYSDVGGCKEQIEKLRE  189

Query  300  MIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVANETGAFFFLING  352
            ++E PL HP  F  LG++PP+GVLL+GPPG+GKTL A+AVAN T A F  + G
Sbjct  190  VVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIG  242


> cpv:cgd6_4350  26S proteasome regulatory subunit 7 (RPT1)-like. 
AAA atpase ; K03061 26S proteasome regulatory subunit T1
Length=432

 Score = 93.6 bits (231),  Expect = 9e-19, Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 55/72 (76%), Gaps = 0/72 (0%)

Query  281  EIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVA  340
            ++ Y DIGG ++Q+ ++RE++E+PL HP  F  LG+ PP+GVLLYGPPG+GKTL A+AVA
Sbjct  170  DVTYNDIGGAKEQLERLREVVEMPLLHPERFVQLGIDPPKGVLLYGPPGTGKTLTARAVA  229

Query  341  NETGAFFFLING  352
            N T A F  + G
Sbjct  230  NRTDACFICVIG  241


> tgo:TGME49_061010  26S protease regulatory subunit 8, putative 
; K03066 26S proteasome regulatory subunit T6
Length=409

 Score = 93.6 bits (231),  Expect = 9e-19, Method: Compositional matrix adjust.
 Identities = 39/76 (51%), Positives = 60/76 (78%), Gaps = 0/76 (0%)

Query  277  ERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIA  336
            E++ E  YE +GG  +Q+ +++E+IELP++HP LF++LG+  P+GVLLYGPPG+GKTL+A
Sbjct  145  EKVPESTYEMVGGLEQQVKEVKEVIELPIKHPELFESLGISQPKGVLLYGPPGTGKTLLA  204

Query  337  KAVANETGAFFFLING  352
            +AVA+ T   F  ++G
Sbjct  205  RAVAHHTDCTFIRVSG  220


> bbo:BBOV_IV009940  23.m06337; 26S protease regulatory subunit 
7; K03061 26S proteasome regulatory subunit T1
Length=425

 Score = 93.6 bits (231),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 58/77 (75%), Gaps = 1/77 (1%)

Query  276  EERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLI  335
            EE+ D I Y D+GGC+ Q+ ++RE++E+PL +P  F  LG+ PP+GVLLYGPPG+GKTL 
Sbjct  159  EEKPD-ITYNDVGGCKVQLEKLREVVEMPLLYPERFVELGIDPPKGVLLYGPPGTGKTLT  217

Query  336  AKAVANETGAFFFLING  352
            A+AVAN T A F  + G
Sbjct  218  ARAVANRTDACFICVIG  234


> xla:443908  psmc5, MGC53028, MGC80185, sug-1, sug1, tbp10; proteasome 
(prosome, macropain) 26S subunit, ATPase, 5; K03066 
26S proteasome regulatory subunit T6
Length=415

 Score = 93.2 bits (230),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 41/76 (53%), Positives = 59/76 (77%), Gaps = 0/76 (0%)

Query  277  ERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIA  336
            E++ +  YE IGG  KQ+ +I+E+IELP++HP LF+ LG+  P+GVLLYGPPG+GKTL+A
Sbjct  150  EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA  209

Query  337  KAVANETGAFFFLING  352
            +AVA+ T   F  ++G
Sbjct  210  RAVAHHTDCTFIRVSG  225


> dre:445285  psmc5, wu:fa14g03, wu:fb23a11, zgc:92464; proteasome 
(prosome, macropain) 26S subunit, ATPase, 5; K03066 26S 
proteasome regulatory subunit T6
Length=406

 Score = 93.2 bits (230),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 41/76 (53%), Positives = 59/76 (77%), Gaps = 0/76 (0%)

Query  277  ERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIA  336
            E++ +  YE IGG  KQ+ +I+E+IELP++HP LF+ LG+  P+GVLLYGPPG+GKTL+A
Sbjct  141  EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA  200

Query  337  KAVANETGAFFFLING  352
            +AVA+ T   F  ++G
Sbjct  201  RAVAHHTDCTFIRVSG  216


> mmu:19184  Psmc5, mSUG1; protease (prosome, macropain) 26S subunit, 
ATPase 5; K03066 26S proteasome regulatory subunit T6
Length=406

 Score = 93.2 bits (230),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 41/76 (53%), Positives = 59/76 (77%), Gaps = 0/76 (0%)

Query  277  ERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIA  336
            E++ +  YE IGG  KQ+ +I+E+IELP++HP LF+ LG+  P+GVLLYGPPG+GKTL+A
Sbjct  141  EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA  200

Query  337  KAVANETGAFFFLING  352
            +AVA+ T   F  ++G
Sbjct  201  RAVAHHTDCTFIRVSG  216


> tpv:TP01_0711  26S proteasome regulatory subunit 7; K03061 26S 
proteasome regulatory subunit T1
Length=425

 Score = 93.2 bits (230),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 41/71 (57%), Positives = 52/71 (73%), Gaps = 0/71 (0%)

Query  282  IGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVAN  341
            I Y DIGGC+ Q+ ++RE++E+PL  P  F  LG+ PP GVLLYGPPG+GKTL A+AVAN
Sbjct  164  ITYNDIGGCKDQLEKLREVVEMPLLQPERFVQLGIDPPNGVLLYGPPGTGKTLTARAVAN  223

Query  342  ETGAFFFLING  352
             T A F  + G
Sbjct  224  RTDACFICVIG  234


> hsa:5705  PSMC5, S8, SUG-1, SUG1, TBP10, TRIP1, p45, p45/SUG; 
proteasome (prosome, macropain) 26S subunit, ATPase, 5; K03066 
26S proteasome regulatory subunit T6
Length=398

 Score = 93.2 bits (230),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 41/76 (53%), Positives = 59/76 (77%), Gaps = 0/76 (0%)

Query  277  ERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIA  336
            E++ +  YE IGG  KQ+ +I+E+IELP++HP LF+ LG+  P+GVLLYGPPG+GKTL+A
Sbjct  133  EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA  192

Query  337  KAVANETGAFFFLING  352
            +AVA+ T   F  ++G
Sbjct  193  RAVAHHTDCTFIRVSG  208


> ath:AT2G20140  26S protease regulatory complex subunit 4, putative; 
K03062 26S proteasome regulatory subunit T2
Length=443

 Score = 93.2 bits (230),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 40/69 (57%), Positives = 53/69 (76%), Gaps = 0/69 (0%)

Query  284  YEDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGKTLIAKAVANET  343
            Y DIGG   Q+ +I+E +ELPL HP L++ +G+KPP+GV+LYG PG+GKTL+AKAVAN T
Sbjct  187  YADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANST  246

Query  344  GAFFFLING  352
             A F  + G
Sbjct  247  SATFLRVVG  255



Lambda     K      H
   0.319    0.138    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 15133203716


  Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
    Posted date:  Sep 17, 2011  2:57 PM
  Number of letters in database: 82,071,388
  Number of sequences in database:  164,496



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40