bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
           164,496 sequences; 82,071,388 total letters



Query=  Eten_1045_orf2
Length=141
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  tgo:TGME49_085230  PRP38 family domain-containing protein ; K12...  69.3    4e-12
  pfa:PF14_0070  pre-mRNA splicing factor, putative; K12850 pre-m...  57.4    1e-08
  bbo:BBOV_III008900  17.m07776; PRP38 family protein; K12850 pre...  49.7    3e-06
  tpv:TP04_0792  hypothetical protein                                 42.4    5e-04


> tgo:TGME49_085230  PRP38 family domain-containing protein ; K12850 
pre-mRNA-splicing factor 38B
Length=614

 Score = 69.3 bits (168),  Expect = 4e-12, Method: Compositional matrix adjust.
 Identities = 33/38 (86%), Positives = 36/38 (94%), Gaps = 0/38 (0%)

Query  29   AKTQQQLLQEFRRKEQEKALATGKDYARRPTSYKSALS  66
            AKTQ  LL+EFRRKE+EKALATGKDYARRPTSYKS+LS
Sbjct  470  AKTQHDLLKEFRRKEREKALATGKDYARRPTSYKSSLS  507


> pfa:PF14_0070  pre-mRNA splicing factor, putative; K12850 pre-mRNA-splicing 
factor 38B
Length=690

 Score = 57.4 bits (137),  Expect = 1e-08, Method: Composition-based stats.
 Identities = 27/40 (67%), Positives = 35/40 (87%), Gaps = 0/40 (0%)

Query  30   KTQQQLLQEFRRKEQEKALATGKDYARRPTSYKSALSLKM  69
            KT+ +L+  F++ E +KALATGKDYARRPTSYKS+LSLK+
Sbjct  576  KTEDELISRFKKLESQKALATGKDYARRPTSYKSSLSLKV  615


> bbo:BBOV_III008900  17.m07776; PRP38 family protein; K12850 pre-mRNA-splicing 
factor 38B
Length=483

 Score = 49.7 bits (117),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 1/72 (1%)

Query  2    PKAKRSRNRDGDKERRRSRSRSAERSAAKTQQQLLQEFRRKEQEKALATGKDYARRPTSY  61
            P  KR R+   D   R+    S+ R   ++++ L +E++R+E ++ LA GKDY +RP+S+
Sbjct  411  PGNKRHRDESIDDRDRKGTGNSSVRHG-ESREALFREYKRRESDRVLAVGKDYGKRPSSF  469

Query  62   KSALSLKMTSSR  73
             ++L  KM ++R
Sbjct  470  NASLPSKMHTNR  481


> tpv:TP04_0792  hypothetical protein
Length=211

 Score = 42.4 bits (98),  Expect = 5e-04, Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 24/27 (88%), Gaps = 0/27 (0%)

Query  32   QQQLLQEFRRKEQEKALATGKDYARRP  58
            ++ L++EF+R+E+EKALA GKDY +RP
Sbjct  169  KEDLIREFKRREREKALAVGKDYGKRP  195



Lambda     K      H
   0.309    0.120    0.321 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 2618291680


  Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
    Posted date:  Sep 17, 2011  2:57 PM
  Number of letters in database: 82,071,388
  Number of sequences in database:  164,496



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40