bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_0905_orf1
Length=403
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_027360 60S ribosomal protein L3, putative ; K02925 ... 697 0.0
bbo:BBOV_I002850 19.m02168; ribosomal protein L3; K02925 large... 646 0.0
tpv:TP01_0560 60S ribosomal protein L3; K02925 large subunit r... 600 2e-171
pfa:PF10_0272 60S ribosomal protein L3, putative; K02925 large... 586 5e-167
hsa:6122 RPL3, MGC104284, TARBP-B; ribosomal protein L3; K0292... 549 9e-156
mmu:27367 Rpl3, F2, J1, MGC103388; ribosomal protein L3; K0292... 547 3e-155
xla:380033 rpl3, MGC53999; ribosomal protein L3; K02925 large ... 533 4e-151
xla:100037184 hypothetical protein LOC100037184 530 5e-150
ath:AT1G61580 RPL3B; RPL3B (R-PROTEIN L3 B); structural consti... 525 9e-149
dre:322571 rpl3, MGC110350, wu:fa99g02, wu:fb65e09, zgc:110350... 524 2e-148
ath:AT1G43170 ARP1; ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); st... 520 4e-147
mmu:433745 Gm12816, OTTMUSG00000008543; predicted gene 12816 520 4e-147
xla:494722 rpl3l; ribosomal protein L3-like; K02925 large subu... 516 6e-146
xla:447398 MGC84749 protein 514 2e-145
cel:F13B10.2 rpl-3; Ribosomal Protein, Large subunit family me... 504 3e-142
mmu:66211 Rpl3l, 1110057H16Rik; ribosomal protein L3-like; K02... 491 2e-138
hsa:6123 RPL3L; ribosomal protein L3-like; K02925 large subuni... 485 1e-136
sce:YOR063W RPL3, MAK8, TCM1, YOR29-14; Rpl3p; K02925 large su... 480 5e-135
mmu:674810 60S ribosomal protein L3-like 471 2e-132
cpv:cgd5_1580 hypothetical protein 470 4e-132
hsa:653881 60S ribosomal protein L3-like 138 4e-32
xla:494992 mrpl3; mitochondrial ribosomal protein L3 37.7 0.084
hsa:11222 MRPL3, MRL3, RPML3; mitochondrial ribosomal protein L3 35.0 0.52
pfa:PF13_0003 VAR; erythrocyte membrane protein 1, PfEMP1; K13... 33.9 1.0
pfa:PFL1960w VAR; erythrocyte membrane protein 1, PfEMP1; K138... 33.5 1.6
pfa:MAL7P1.176 eba-175, eba_175, eba175; erythrocyte binding a... 33.1 1.7
pfa:PFB1055c erythrocyte membrane protein 1, PfEMP1; K13850 er... 32.7 2.3
pfa:PF08_0140 VAR; erythrocyte membrane protein 1, PfEMP1; K13... 32.7 2.4
pfa:PFD1015c VAR; erythrocyte membrane protein 1, PfEMP1; K138... 32.7 2.9
dre:336283 mrpl3, fj61d01, wu:fj61d01, zgc:66423; mitochondria... 32.3 3.8
mmu:94062 Mrpl3, 2010320L16Rik, 5930422H18Rik, AA407889; mitoc... 32.0 5.0
pfa:MAL7P1.187 VAR; erythrocyte membrane protein 1, PfEMP1; K1... 31.2 6.6
> tgo:TGME49_027360 60S ribosomal protein L3, putative ; K02925
large subunit ribosomal protein L3e
Length=389
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/388 (81%), Positives = 367/388 (94%), Gaps = 0/388 (0%)
Query 16 MSHRKFERPRHGSLGFCPRKRCRRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHIVREV 75
MSHRKFERPRHGSLGF PRKRC+RHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTH+VRE+
Sbjct 1 MSHRKFERPRHGSLGFLPRKRCKRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHVVREL 60
Query 76 ERPGSKLHKKEVVEAVTIVESPPMVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFYK 135
++PGSKLHKKE+VEAVT+V++PPMVCVG+VGYIETP+GLRAL TVWAGHLS+EC+RRFYK
Sbjct 61 DKPGSKLHKKEIVEAVTVVDTPPMVCVGVVGYIETPRGLRALVTVWAGHLSDECKRRFYK 120
Query 136 NWYKSKKKAFTRYSKKYAENNKMQAEIDSIKQHCAVIRAICHTQPSKTPTGLRKAHIMEI 195
NWYKSK+KAFT+Y+K+Y +NNKM+AE+ +K +C+VIRAICHTQPSKTP G +KAH+MEI
Sbjct 121 NWYKSKRKAFTKYAKRYGDNNKMEAELTRMKNYCSVIRAICHTQPSKTPIGSKKAHVMEI 180
Query 196 QVNGGTVADKVDFVTKMFESPVPISAVFEQDEMLDVIGVTKGHGVKGVVSRFGVTRLPRK 255
QVNGG++A+KVDF TKMFE+ VP+ AVF + EM+DVIGVTKGHGVKGVVSR+GVTRLPRK
Sbjct 181 QVNGGSIAEKVDFCTKMFETAVPVKAVFTEGEMIDVIGVTKGHGVKGVVSRWGVTRLPRK 240
Query 256 THRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGSGSDPRNGSTDADLT 315
THRGLRK+ACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYR+G+G+DPRN +T++DLT
Sbjct 241 THRGLRKIACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRVGNGADPRNATTESDLT 300
Query 316 EKRITPMGGFPHYGEVRSDFIMIKGCIVGCKKRPITMRKTLVPRTSRRALENIHLKFIDT 375
EKRITPMGGFPHYG V +DF+++KGCIVGCKKRPIT RKTLVPRT+RRALE ++LKFIDT
Sbjct 301 EKRITPMGGFPHYGTVNNDFLLLKGCIVGCKKRPITFRKTLVPRTTRRALEPVNLKFIDT 360
Query 376 SSKWGHGRFQTSDEKAKFYGPLKRTAAV 403
S+KWGHGRFQTS+EKAKFYGPLK AA
Sbjct 361 SAKWGHGRFQTSEEKAKFYGPLKSRAAA 388
> bbo:BBOV_I002850 19.m02168; ribosomal protein L3; K02925 large
subunit ribosomal protein L3e
Length=393
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 296/387 (76%), Positives = 345/387 (89%), Gaps = 1/387 (0%)
Query 16 MSHRKFERPRHGSLGFCPRKRCRRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHIVREV 75
MSHRKFERPR G+LGF P+KRC+ RGK+++FPKDDP+KPPH TAFMGYKAGMTH+ E
Sbjct 1 MSHRKFERPRSGNLGFFPKKRCKSQRGKIRSFPKDDPTKPPHFTAFMGYKAGMTHVTHEP 60
Query 76 ERPGSKLHKKEVVEAVTIVESPPMVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFYK 135
++PGSKLHKK+ VEAVTI+E+PPM+ VGLVGYIETP+GLR L+TVWAGHLS+ECRRRFYK
Sbjct 61 DKPGSKLHKKDTVEAVTIIETPPMIVVGLVGYIETPRGLRVLTTVWAGHLSDECRRRFYK 120
Query 136 NWYKSKKKAFTRYSKKYAENNKMQAEIDSIKQHCAVIRAICHTQPSKTPTGLRKAHIMEI 195
NWYKSKKKAFT+Y+KK+AE KM +I I +C V+RAICHTQPSKTP ++KA I+EI
Sbjct 121 NWYKSKKKAFTKYAKKFAET-KMSKDISRIVNYCTVVRAICHTQPSKTPLSMKKAFIIEI 179
Query 196 QVNGGTVADKVDFVTKMFESPVPISAVFEQDEMLDVIGVTKGHGVKGVVSRFGVTRLPRK 255
QVNGGTV +KVD+VTKMFE P+P++AVF +EM+DV+GVTKGHG+KGV+SRFGVTRLPRK
Sbjct 180 QVNGGTVQEKVDYVTKMFEQPLPVNAVFASNEMVDVLGVTKGHGMKGVISRFGVTRLPRK 239
Query 256 THRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGSGSDPRNGSTDADLT 315
THRGLRKVACIG+WHPARVQFQVPR GQKGYFHRTE NKK+YR+G GS+PRN STDADLT
Sbjct 240 THRGLRKVACIGSWHPARVQFQVPRSGQKGYFHRTERNKKIYRLGLGSNPRNASTDADLT 299
Query 316 EKRITPMGGFPHYGEVRSDFIMIKGCIVGCKKRPITMRKTLVPRTSRRALENIHLKFIDT 375
EK+ITPMGGFPHYGEV+ DF+MIKGCIVG KKRPI +RKTLVP+ SR AL I+L+FIDT
Sbjct 300 EKQITPMGGFPHYGEVKDDFLMIKGCIVGTKKRPIVIRKTLVPQVSRDALAEINLRFIDT 359
Query 376 SSKWGHGRFQTSDEKAKFYGPLKRTAA 402
SSKWGHGRFQTS EK K+YGPLK+T
Sbjct 360 SSKWGHGRFQTSGEKQKYYGPLKKTVT 386
> tpv:TP01_0560 60S ribosomal protein L3; K02925 large subunit
ribosomal protein L3e
Length=384
Score = 600 bits (1548), Expect = 2e-171, Method: Compositional matrix adjust.
Identities = 288/383 (75%), Positives = 334/383 (87%), Gaps = 1/383 (0%)
Query 16 MSHRKFERPRHGSLGFCPRKRCRRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHIVREV 75
MSHRKFERPR GSLGF P+KR R HR K+++FP DDP+KPPHLTAF+GYKAGMTH+V EV
Sbjct 1 MSHRKFERPRSGSLGFLPKKRSRTHRAKIRSFPSDDPAKPPHLTAFVGYKAGMTHVVTEV 60
Query 76 ERPGSKLHKKEVVEAVTIVESPPMVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFYK 135
+RPGSKLHKKEVVEAVT+VE+PPMVCVGLVGY+ETP+GL+ L TVWAGHLS+E RRRFYK
Sbjct 61 DRPGSKLHKKEVVEAVTVVETPPMVCVGLVGYVETPRGLKVLGTVWAGHLSDELRRRFYK 120
Query 136 NWYKSKKKAFTRYSKKYAENNKMQAEIDSIKQHCAVIRAICHTQPSKTPTGLRKAHIMEI 195
NWYKSKKKAFT+Y+KK+AE M+ E+ I+ + V+RA+ HTQPSKT LRKAH++E+
Sbjct 121 NWYKSKKKAFTKYAKKFAETG-MEQELKRIRNYATVVRALMHTQPSKTSLSLRKAHLLEV 179
Query 196 QVNGGTVADKVDFVTKMFESPVPISAVFEQDEMLDVIGVTKGHGVKGVVSRFGVTRLPRK 255
QVNGGT +KV +V +FE VP+S VF ++EMLDV+GVTKGHGVKGVVSR+GVTRLPRK
Sbjct 180 QVNGGTTDEKVSYVVGLFEKSVPVSTVFGENEMLDVLGVTKGHGVKGVVSRYGVTRLPRK 239
Query 256 THRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGSGSDPRNGSTDADLT 315
THRGLRKVACIG+WHPARVQFQVPRHGQKGY RTE NKK+YR+G GS RNGSTD+DLT
Sbjct 240 THRGLRKVACIGSWHPARVQFQVPRHGQKGYHKRTERNKKIYRLGLGSSARNGSTDSDLT 299
Query 316 EKRITPMGGFPHYGEVRSDFIMIKGCIVGCKKRPITMRKTLVPRTSRRALENIHLKFIDT 375
EK ITPMGGFPHYG VR DF+M+KGCI G +KR IT+RKTLVP+TSR AL ++LKFIDT
Sbjct 300 EKTITPMGGFPHYGVVREDFLMLKGCIPGTRKRVITLRKTLVPQTSRHALAEVNLKFIDT 359
Query 376 SSKWGHGRFQTSDEKAKFYGPLK 398
SSKWGHGRFQTS+EK FYGPLK
Sbjct 360 SSKWGHGRFQTSEEKKSFYGPLK 382
> pfa:PF10_0272 60S ribosomal protein L3, putative; K02925 large
subunit ribosomal protein L3e
Length=386
Score = 586 bits (1511), Expect = 5e-167, Method: Compositional matrix adjust.
Identities = 273/384 (71%), Positives = 325/384 (84%), Gaps = 2/384 (0%)
Query 16 MSHRKFERPRHGSLGFCPRKRCRRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHIVREV 75
MSHRKFERPRHGSLGF PRKRC+R RGK+++FPKDD KPPH TAFMGYKAGMTHIVREV
Sbjct 1 MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDDKEKPPHFTAFMGYKAGMTHIVREV 60
Query 76 ERPGSKLHKKEVVEAVTIVESPPMVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFYK 135
++PGSKLHKKE+VEA TI+E PMV VG+VGY ETP+GLR LSTVWA H+S+E RRR+YK
Sbjct 61 DKPGSKLHKKEIVEACTIIECAPMVVVGIVGYRETPKGLRILSTVWANHVSDEFRRRYYK 120
Query 136 NWYKSKKKAFTRYSKKYAENNKMQAEIDSIKQHCAVIRAICHTQPSKTPTGLRKAHIMEI 195
NWYKS+KKAFT+ S E K + I+++C V+RAICHTQPSKTP ++KAHIME+
Sbjct 121 NWYKSEKKAFTK-SLNVPEATK-NCLLKRIEKYCTVLRAICHTQPSKTPLRMKKAHIMEV 178
Query 196 QVNGGTVADKVDFVTKMFESPVPISAVFEQDEMLDVIGVTKGHGVKGVVSRFGVTRLPRK 255
Q+NGG++ +K++FV +M E +P+S VF +EM+DVI VTKGHG KGVVSR+GV RLPRK
Sbjct 179 QINGGSMKEKLEFVKEMLEKNLPVSTVFNPNEMIDVISVTKGHGTKGVVSRYGVKRLPRK 238
Query 256 THRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGSGSDPRNGSTDADLT 315
THRGLRKVACIGAWHPARVQFQ+PRHGQKGYFHRTE NKK+YRIG +D + STDAD+T
Sbjct 239 THRGLRKVACIGAWHPARVQFQIPRHGQKGYFHRTERNKKIYRIGLKTDKNSASTDADIT 298
Query 316 EKRITPMGGFPHYGEVRSDFIMIKGCIVGCKKRPITMRKTLVPRTSRRALENIHLKFIDT 375
EK+ITPMGGFPHYG V DF+++KGC+ G KKRPIT+RK +VP+ SR AL + LKFIDT
Sbjct 299 EKKITPMGGFPHYGVVNEDFLLLKGCVAGTKKRPITLRKNIVPQVSRDALAQVSLKFIDT 358
Query 376 SSKWGHGRFQTSDEKAKFYGPLKR 399
SSK GHGRFQTS+EK K+YGPLK+
Sbjct 359 SSKIGHGRFQTSEEKVKYYGPLKK 382
> hsa:6122 RPL3, MGC104284, TARBP-B; ribosomal protein L3; K02925
large subunit ribosomal protein L3e
Length=403
Score = 549 bits (1414), Expect = 9e-156, Method: Compositional matrix adjust.
Identities = 267/394 (67%), Positives = 319/394 (80%), Gaps = 10/394 (2%)
Query 16 MSHRKFERPRHGSLGFCPRKRCRRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHIVREV 75
MSHRKF PRHGSLGF PRKR RHRGKVK+FPKDDPSKP HLTAF+GYKAGMTHIVREV
Sbjct 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query 76 ERPGSKLHKKEVVEAVTIVESPPMVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFYK 135
+RPGSK++KKEVVEAVTIVE+PPMV VG+VGY+ETP+GLR TV+A H+S+EC+RRFYK
Sbjct 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query 136 NWYKSKKKAFTRYSKKYA-ENNKMQAEID--SIKQHCAVIRAICHTQPSKTPTGLRKAHI 192
NW+KSKKKAFT+Y KK+ E+ K Q E D S+K++C VIR I HTQ P +KAH+
Sbjct 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180
Query 193 MEIQVNGGTVADKVDFVTKMFESPVPISAVFEQDEMLDVIGVTKGHGVKGVVSRFGVTRL 252
MEIQVNGGTVA+K+D+ + E VP++ VF QDEM+DVIGVTKG G KGV SR+ +L
Sbjct 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240
Query 253 PRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGSGSDPRNG---- 308
PRKTHRGLRKVACIGAWHPARV F V R GQKGY HRTE+NKK+Y+IG G ++G
Sbjct 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300
Query 309 ---STDADLTEKRITPMGGFPHYGEVRSDFIMIKGCIVGCKKRPITMRKTLVPRTSRRAL 365
STD DL++K I P+GGF HYGEV +DF+M+KGC+VG KKR +T+RK+L+ +T RRAL
Sbjct 301 NNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRAL 360
Query 366 ENIHLKFIDTSSKWGHGRFQTSDEKAKFYGPLKR 399
E I LKFIDT+SK+GHGRFQT +EK F GPLK+
Sbjct 361 EKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLKK 394
> mmu:27367 Rpl3, F2, J1, MGC103388; ribosomal protein L3; K02925
large subunit ribosomal protein L3e
Length=403
Score = 547 bits (1409), Expect = 3e-155, Method: Compositional matrix adjust.
Identities = 262/394 (66%), Positives = 319/394 (80%), Gaps = 10/394 (2%)
Query 16 MSHRKFERPRHGSLGFCPRKRCRRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHIVREV 75
MSHRKF PRHGSLGF PRKR RHRGKVK+FPKDD SKP HLTAF+GYKAGMTHIVREV
Sbjct 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60
Query 76 ERPGSKLHKKEVVEAVTIVESPPMVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFYK 135
+RPGSK++KKEVVEAVTIVE+PPMV VG+VGY+ETP+GLR TV+A H+S+EC+RRFYK
Sbjct 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query 136 NWYKSKKKAFTRYSKKYAENN---KMQAEIDSIKQHCAVIRAICHTQPSKTPTGLRKAHI 192
NW+KSKKKAFT+Y KK+ ++ +++ + +S+K++C VIR I HTQ P +KAH+
Sbjct 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLPLRQKKAHL 180
Query 193 MEIQVNGGTVADKVDFVTKMFESPVPISAVFEQDEMLDVIGVTKGHGVKGVVSRFGVTRL 252
MEIQVNGGTVA+K+D+ + E VP++ VF QDEM+DVIGVTKG G KGV SR+ +L
Sbjct 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240
Query 253 PRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGSGSDPRNG---- 308
PRKTHRGLRKVACIGAWHPARV F V R GQKGY HRTE+NKK+Y+IG G ++G
Sbjct 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 300
Query 309 ---STDADLTEKRITPMGGFPHYGEVRSDFIMIKGCIVGCKKRPITMRKTLVPRTSRRAL 365
STD DL++K I P+GGF HYGEV +DFIM+KGC+VG KKR +T+RK+L+ +T RRAL
Sbjct 301 NNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRAL 360
Query 366 ENIHLKFIDTSSKWGHGRFQTSDEKAKFYGPLKR 399
E I LKFIDT+SK+GHGRFQT +EK F GPLK+
Sbjct 361 EKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLKK 394
> xla:380033 rpl3, MGC53999; ribosomal protein L3; K02925 large
subunit ribosomal protein L3e
Length=403
Score = 533 bits (1374), Expect = 4e-151, Method: Compositional matrix adjust.
Identities = 267/394 (67%), Positives = 323/394 (81%), Gaps = 10/394 (2%)
Query 16 MSHRKFERPRHGSLGFCPRKRCRRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHIVREV 75
MSHRKF PRHGSLGF PRKRC+RHRGKVK+FPKDDPSKP HLTAF+GYKAGMTHIVREV
Sbjct 1 MSHRKFSAPRHGSLGFLPRKRCKRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60
Query 76 ERPGSKLHKKEVVEAVTIVESPPMVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFYK 135
+RPGSK++KKEVVEAVT+VE+PPMV VG+VGY++TP+GLR+L T++A H+S+EC+RRFYK
Sbjct 61 DRPGSKVNKKEVVEAVTVVETPPMVIVGIVGYVQTPRGLRSLKTIFAEHISDECKRRFYK 120
Query 136 NWYKSKKKAFTRYSKKYA-ENNKMQAEID--SIKQHCAVIRAICHTQPSKTPTGLRKAHI 192
NWYKSKKKAFT+Y KK+ E+ K Q E D S+K++C VIR I HTQ P +K+H+
Sbjct 121 NWYKSKKKAFTKYCKKWQDEDGKKQLEKDFASMKKYCQVIRVIAHTQMRLLPLRQKKSHL 180
Query 193 MEIQVNGGTVADKVDFVTKMFESPVPISAVFEQDEMLDVIGVTKGHGVKGVVSRFGVTRL 252
MEIQVNGGT+A+KVD+ + E V I VF QDEM+DVIGVTKG G KGV SR+ +L
Sbjct 181 MEIQVNGGTIAEKVDWAREKLEQQVVIGGVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240
Query 253 PRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGSGSDPRNG---- 308
PRKTHRGLRKVACIGAWHPARV F V R GQKGY HRTE+NKK+Y+IG G ++G
Sbjct 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHSKDGKLVK 300
Query 309 ---STDADLTEKRITPMGGFPHYGEVRSDFIMIKGCIVGCKKRPITMRKTLVPRTSRRAL 365
STD DL++K I P+GGF HYGEV++DFIM+KGC++G KKR +T+RK+L+ +TSRRAL
Sbjct 301 NNASTDYDLSDKSINPLGGFVHYGEVKNDFIMLKGCVIGTKKRVLTLRKSLLVQTSRRAL 360
Query 366 ENIHLKFIDTSSKWGHGRFQTSDEKAKFYGPLKR 399
E I LKFIDT+SK+GHGRFQT +EK F GPLK+
Sbjct 361 EKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLKK 394
> xla:100037184 hypothetical protein LOC100037184
Length=405
Score = 530 bits (1364), Expect = 5e-150, Method: Compositional matrix adjust.
Identities = 272/399 (68%), Positives = 316/399 (79%), Gaps = 15/399 (3%)
Query 16 MSHRKFERPRHGSLGFCPRKRCRRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHIVREV 75
MSHRKFE PRHGSLGF PRKR RRHRGKVK+FP+DD SKP HLTAF+GYKAGMTHIVREV
Sbjct 1 MSHRKFEAPRHGSLGFLPRKRTRRHRGKVKSFPRDDASKPCHLTAFLGYKAGMTHIVREV 60
Query 76 ERPGSK-LHKKEVVEAVTIVESPPMVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFY 134
RPGSK LH KE+VEAVTI+E+PPMV VG+VGY+ TP+GLRAL+TVWA +LSEEC+RRFY
Sbjct 61 IRPGSKALHNKEIVEAVTIIETPPMVVVGVVGYVATPRGLRALTTVWAQNLSEECKRRFY 120
Query 135 KNWYKSKKKAFTRYSKKY---AENNKMQAEIDSIKQHCAVIRAICHTQPSKTPTG----L 187
K WYKSKKKAFT+Y+KKY A ++ E++ IK++C+V+R I HTQ SK
Sbjct 121 KTWYKSKKKAFTKYAKKYETDAGKKEIDHELERIKKYCSVVRVIAHTQMSKMRGARADRQ 180
Query 188 RKAHIMEIQVNGGTVADKVDFVTKMFESPVPISAVFEQDEMLDVIGVTKGHGVKGVVSRF 247
RKAHIME+QVNGG+VADKVDF +FE VP+ +VF Q+E +D+I VTKG G +GV R+
Sbjct 181 RKAHIMEVQVNGGSVADKVDFARGLFEQQVPVKSVFGQNENVDIIAVTKGKGFEGVTFRW 240
Query 248 GVTRLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGSGSDPRN 307
GV +L RKTHRGLRKVACIGAWHPARV F VPR GQ GY HRTE+NKK+YRIG G ++
Sbjct 241 GVKKLQRKTHRGLRKVACIGAWHPARVGFTVPRAGQNGYHHRTELNKKIYRIGDGIHTKD 300
Query 308 G-------STDADLTEKRITPMGGFPHYGEVRSDFIMIKGCIVGCKKRPITMRKTLVPRT 360
G STD DLTEK ITPMGGFPHYGEV +DFIMIKGC G KKR IT+RK+L+ T
Sbjct 301 GKVVKNNASTDYDLTEKSITPMGGFPHYGEVNNDFIMIKGCCAGVKKRVITLRKSLMVHT 360
Query 361 SRRALENIHLKFIDTSSKWGHGRFQTSDEKAKFYGPLKR 399
R LE I+LKFIDTSSK+GHGRFQT EK F G LK+
Sbjct 361 KRAHLEEINLKFIDTSSKFGHGRFQTQAEKKAFMGLLKK 399
> ath:AT1G61580 RPL3B; RPL3B (R-PROTEIN L3 B); structural constituent
of ribosome; K02925 large subunit ribosomal protein
L3e
Length=390
Score = 525 bits (1353), Expect = 9e-149, Method: Compositional matrix adjust.
Identities = 264/386 (68%), Positives = 317/386 (82%), Gaps = 7/386 (1%)
Query 16 MSHRKFERPRHGSLGFCPRKRCRRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHIVREV 75
MSHRKFE PRHGSLGF PRKR RHRGKVKAFPKDDP+KP LT+F+GYKAGMTHIVR+V
Sbjct 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60
Query 76 ERPGSKLHKKEVVEAVTIVESPPMVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFYK 135
E+PGSKLHKKE EAVTI+E+PPMV VG+VGY++TP+GLR+L TVWA HLSEE RRRFYK
Sbjct 61 EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120
Query 136 NWYKSKKKAFTRYSKKY-AENNK--MQAEIDSIKQHCAVIRAICHTQPSKTPTGL--RKA 190
NW KSKKKAFTRYSKK+ E K +Q++++ +K++C+VIR + HTQ K GL +KA
Sbjct 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMK-GLKQKKA 179
Query 191 HIMEIQVNGGTVADKVDFVTKMFESPVPISAVFEQDEMLDVIGVTKGHGVKGVVSRFGVT 250
H+ EIQ+NGG +A KVD+ +FE VP+ A+F++DEM+D+IGVTKG G +GVV+R+GVT
Sbjct 180 HLNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
Query 251 RLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGS-GSDPRNGS 309
RLPRKTHRGLRKVACIGAWHPARV + V R GQ GY HRTEMNKKVYR+G G + +
Sbjct 240 RLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAM 299
Query 310 TDADLTEKRITPMGGFPHYGEVRSDFIMIKGCIVGCKKRPITMRKTLVPRTSRRALENIH 369
T+ D TEK ITPMGGFPHYG V+ D++MIKGC VG KKR +T+R+TL+ +TSR A+E I
Sbjct 300 TEYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIK 359
Query 370 LKFIDTSSKWGHGRFQTSDEKAKFYG 395
LKFID +S GHGRFQTS EKAKFYG
Sbjct 360 LKFIDAASNGGHGRFQTSQEKAKFYG 385
> dre:322571 rpl3, MGC110350, wu:fa99g02, wu:fb65e09, zgc:110350;
ribosomal protein L3; K02925 large subunit ribosomal protein
L3e
Length=403
Score = 524 bits (1350), Expect = 2e-148, Method: Compositional matrix adjust.
Identities = 261/394 (66%), Positives = 319/394 (80%), Gaps = 10/394 (2%)
Query 16 MSHRKFERPRHGSLGFCPRKRCRRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHIVREV 75
MSHRKF P HGSLGF PRKRC+RHRGKVK+FPKDDPSKP HLTAF+GYKAGMTHIVREV
Sbjct 1 MSHRKFSAPLHGSLGFLPRKRCKRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query 76 ERPGSKLHKKEVVEAVTIVESPPMVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFYK 135
+RPGSK++KKEVVEAVT+VE+PPM+ VG+VGY+ TP+GLR+ T++A H+S+EC+RRFYK
Sbjct 61 DRPGSKVNKKEVVEAVTVVETPPMIVVGVVGYVMTPRGLRSFKTIFAEHISDECKRRFYK 120
Query 136 NWYKSKKKAFTRYSKKYA-ENNKMQAEID--SIKQHCAVIRAICHTQPSKTPTGLRKAHI 192
NWYKSKKKAFT+Y K++ E K Q E D S+K++C +IR I HTQ P +K+H+
Sbjct 121 NWYKSKKKAFTKYCKRWQDEEGKKQLEKDFSSMKKYCQIIRIIAHTQMRLLPHRQKKSHL 180
Query 193 MEIQVNGGTVADKVDFVTKMFESPVPISAVFEQDEMLDVIGVTKGHGVKGVVSRFGVTRL 252
MEIQ+NGGT++DKVD+ + E +PI+ VF QDEM+DVIGVTKGHG KGV SR+ +L
Sbjct 181 MEIQLNGGTISDKVDWAREKLEQSIPIANVFSQDEMIDVIGVTKGHGCKGVTSRWHTKKL 240
Query 253 PRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGSGSDPRNG---- 308
PRKTHRGLRKVACIGAWHPARV F V R GQKGY HRTE+NKK+Y+IG G ++G
Sbjct 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGVGYHNKDGKLVK 300
Query 309 ---STDADLTEKRITPMGGFPHYGEVRSDFIMIKGCIVGCKKRPITMRKTLVPRTSRRAL 365
STD DL+ K I P+GGF HYGEV +DF+M+KGC+VG KKR +T+RK+L+ +TSRRA
Sbjct 301 NNASTDYDLSNKSINPLGGFVHYGEVTNDFLMLKGCVVGTKKRVLTLRKSLLVQTSRRAQ 360
Query 366 ENIHLKFIDTSSKWGHGRFQTSDEKAKFYGPLKR 399
E I LKFIDT+SK+GHGRFQT +EK F GPLK+
Sbjct 361 EKIDLKFIDTTSKFGHGRFQTIEEKKTFMGPLKK 394
> ath:AT1G43170 ARP1; ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1);
structural constituent of ribosome
Length=389
Score = 520 bits (1339), Expect = 4e-147, Method: Compositional matrix adjust.
Identities = 260/385 (67%), Positives = 314/385 (81%), Gaps = 7/385 (1%)
Query 16 MSHRKFERPRHGSLGFCPRKRCRRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHIVREV 75
MSHRKFE PRHGSLGF PRKR RHRGKVKAFPKDD +KP TAFMGYKAGMTHIVREV
Sbjct 1 MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60
Query 76 ERPGSKLHKKEVVEAVTIVESPPMVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFYK 135
E+PGSKLHKKE EAVTI+E+P MV VG+V Y++TP+GLR+L+TVWA HLSEE RRRFYK
Sbjct 61 EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120
Query 136 NWYKSKKKAFTRYSKKY-AENNK--MQAEIDSIKQHCAVIRAICHTQPSKTPTGL--RKA 190
NW KSKKKAFT Y+K+Y +E+ K +QA+++ +K++ VIR + HTQ K GL +KA
Sbjct 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMK-GLKQKKA 179
Query 191 HIMEIQVNGGTVADKVDFVTKMFESPVPISAVFEQDEMLDVIGVTKGHGVKGVVSRFGVT 250
H+MEIQ+NGGT+A KVDF FE +PI AVF++DEM+D+IGVTKG G +GVV+R+GVT
Sbjct 180 HMMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
Query 251 RLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGS-GSDPRNGS 309
RLPRKTHRGLRKVACIGAWHPARV + V R GQ GY HRTE+NKK+YR+G G++
Sbjct 240 RLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAM 299
Query 310 TDADLTEKRITPMGGFPHYGEVRSDFIMIKGCIVGCKKRPITMRKTLVPRTSRRALENIH 369
T+ D TEK +TPMGGFPHYG V+ D++MIKGC VG KKR +T+R++L+ +TSR ALE I
Sbjct 300 TEYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIK 359
Query 370 LKFIDTSSKWGHGRFQTSDEKAKFY 394
LKFIDT+S +GHGRFQTS EK +FY
Sbjct 360 LKFIDTASIFGHGRFQTSLEKMRFY 384
> mmu:433745 Gm12816, OTTMUSG00000008543; predicted gene 12816
Length=403
Score = 520 bits (1339), Expect = 4e-147, Method: Compositional matrix adjust.
Identities = 253/394 (64%), Positives = 310/394 (78%), Gaps = 10/394 (2%)
Query 16 MSHRKFERPRHGSLGFCPRKRCRRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHIVREV 75
MSH KF PRHGSLGF PRKR RH GKVK+FPKDD SKP HLTAF+GYKAGMTHIVREV
Sbjct 1 MSHGKFSAPRHGSLGFLPRKRSSRHPGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60
Query 76 ERPGSKLHKKEVVEAVTIVESPPMVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFYK 135
+RPGS+++KKEVVEAVTIVE+PPMV VG+VGY+E P+GLR TV+A H+S EC+RRFYK
Sbjct 61 DRPGSEVNKKEVVEAVTIVENPPMVVVGIVGYVENPRGLRTFKTVFAEHISNECKRRFYK 120
Query 136 NWYKSKKKAFTRYSKKYAENN---KMQAEIDSIKQHCAVIRAICHTQPSKTPTGLRKAHI 192
NW+KSKKKAFT+Y KK+ ++ +++ + +S+K++C VIR I HTQ P +KAH
Sbjct 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMHLLPLCQKKAHF 180
Query 193 MEIQVNGGTVADKVDFVTKMFESPVPISAVFEQDEMLDVIGVTKGHGVKGVVSRFGVTRL 252
MEI VNGGTVA+K+D+ + E VP++ VF QDEM+DVIGVTKG G KGV SR+ +L
Sbjct 181 MEIPVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240
Query 253 PRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGSGSDPRNG---- 308
PRKTHRGLRKVACIGAWHPARV F V R GQKGY +RTE+NKK+Y+I G ++G
Sbjct 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHYRTEINKKIYKICQGHLIKDGKLIK 300
Query 309 ---STDADLTEKRITPMGGFPHYGEVRSDFIMIKGCIVGCKKRPITMRKTLVPRTSRRAL 365
STD DL++K I P+GGF HYGEV +DFIM+KGC+VG KKR +T+ K+L+ +T RRAL
Sbjct 301 NNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGAKKRVLTLCKSLLVQTKRRAL 360
Query 366 ENIHLKFIDTSSKWGHGRFQTSDEKAKFYGPLKR 399
E I LKFIDT+SK+GHGRFQT +EK F G LK+
Sbjct 361 EKIDLKFIDTTSKFGHGRFQTMEEKKAFMGSLKK 394
> xla:494722 rpl3l; ribosomal protein L3-like; K02925 large subunit
ribosomal protein L3e
Length=407
Score = 516 bits (1329), Expect = 6e-146, Method: Compositional matrix adjust.
Identities = 248/394 (62%), Positives = 308/394 (78%), Gaps = 10/394 (2%)
Query 16 MSHRKFERPRHGSLGFCPRKRCRRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHIVREV 75
MSHRKF PRHG LGF P KR RHRGKVK +PKDDPSKP HLTAF+GYKAGMTH +RE+
Sbjct 1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPKDDPSKPVHLTAFLGYKAGMTHTLREI 60
Query 76 ERPGSKLHKKEVVEAVTIVESPPMVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFYK 135
RPG K+ K+E VEAVTI+E+PP+V VG+VGY+ETP+GLR+L T++A H+S+EC+RRFY+
Sbjct 61 HRPGLKISKREEVEAVTIIETPPLVVVGIVGYVETPRGLRSLKTIFAEHISDECKRRFYR 120
Query 136 NWYKSKKKAFTRYSKKYA-ENNKMQAEID--SIKQHCAVIRAICHTQPSKTPTGLRKAHI 192
NWYKSKKK+FT+Y KK+ E K Q E D ++K++C VIR I HTQ P +KAH+
Sbjct 121 NWYKSKKKSFTKYCKKWQDEEGKKQLEKDFSAMKKYCKVIRVIIHTQMKLLPLRQKKAHV 180
Query 193 MEIQVNGGTVADKVDFVTKMFESPVPISAVFEQDEMLDVIGVTKGHGVKGVVSRFGVTRL 252
MEIQ+NGGTVA+KVD+ + E VPI+ VF QDEM+DVIGVTKG GV+GV SR+ +L
Sbjct 181 MEIQLNGGTVAEKVDWAHEKLEKQVPINTVFCQDEMIDVIGVTKGKGVRGVTSRWHTKKL 240
Query 253 PRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGSGSD-------P 305
PRKTH+GLRKVACIGAWHPARV + + R GQKGY HRTE+NKK+YRIG G
Sbjct 241 PRKTHKGLRKVACIGAWHPARVAYTIARAGQKGYHHRTEINKKIYRIGKGIHLEDGKVVK 300
Query 306 RNGSTDADLTEKRITPMGGFPHYGEVRSDFIMIKGCIVGCKKRPITMRKTLVPRTSRRAL 365
N +T D+T+K ITP+GGFPHYG+V +D++M+KGC++G KKR +T+RK+L+ TSRRAL
Sbjct 301 NNAATQYDITDKSITPLGGFPHYGQVNNDYVMLKGCVMGTKKRVLTLRKSLLVHTSRRAL 360
Query 366 ENIHLKFIDTSSKWGHGRFQTSDEKAKFYGPLKR 399
E I LKFIDT+SK+GHG FQT EK F G K+
Sbjct 361 EAIELKFIDTTSKFGHGCFQTDQEKRAFMGSQKK 394
> xla:447398 MGC84749 protein
Length=420
Score = 514 bits (1324), Expect = 2e-145, Method: Compositional matrix adjust.
Identities = 256/410 (62%), Positives = 305/410 (74%), Gaps = 27/410 (6%)
Query 16 MSHRKFERPRHGSLGFCPRKRCRRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHIVREV 75
MSHRKF PRHGS+GF P+KR RR RGK KAFPKD S PPHLTAF+GYKAGMTH+VREV
Sbjct 1 MSHRKFSAPRHGSMGFTPKKRSRRIRGKCKAFPKDRRSLPPHLTAFLGYKAGMTHVVREV 60
Query 76 ERPGSKLHKKEVVEAVTIVESPPMVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFYK 135
+RPGSK+HK+E+VE VTI+E PPMV VG+VGY T +GLR TVWA HL+EECRRRFYK
Sbjct 61 DRPGSKVHKREIVEPVTILECPPMVIVGMVGYAPTARGLRTFKTVWAEHLTEECRRRFYK 120
Query 136 NWYKSKKKAFTRYSKKYAEN---NKMQAEIDSIKQHCAVIRAICHTQPSKTPTGLRKAHI 192
+W KSK+KAFT+ SKK+A+ ++ ++ IK++C V+RAI HTQ +KAHI
Sbjct 121 DWCKSKRKAFTKASKKWADEAGLKEINRDLRKIKKYCTVVRAIAHTQMRLMKHRQKKAHI 180
Query 193 MEIQVNGGTVADKVDFVTKMFESPVPISAVFEQDEMLDVIGVTKGHGVKGVVSRFGVTRL 252
MEIQVNGGTVA KVD++ + FE +P+ VF QDEM+DVIGVTKG G KGV SR+ +L
Sbjct 181 MEIQVNGGTVAQKVDWIRQHFEKQIPVMNVFAQDEMIDVIGVTKGKGFKGVTSRWHTKKL 240
Query 253 PRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGSGSDPR------ 306
PRKTH+GLRKVACIG+WHPARV V R GQKGYFHRTE+NKK+YRIG G +
Sbjct 241 PRKTHKGLRKVACIGSWHPARVGSTVARAGQKGYFHRTELNKKIYRIGLGLQAQLEVAKS 300
Query 307 ------------------NGSTDADLTEKRITPMGGFPHYGEVRSDFIMIKGCIVGCKKR 348
N ST+ DLT K ITPMGGFPHYGEVR+D++MIKGC +G KKR
Sbjct 301 EAAKEDNKDKAALIKPKGNASTEFDLTAKNITPMGGFPHYGEVRNDYVMIKGCCMGPKKR 360
Query 349 PITMRKTLVPRTSRRALENIHLKFIDTSSKWGHGRFQTSDEKAKFYGPLK 398
IT+RKT++ + SRR+ E I LKFIDTSSK+GHGRFQT EK GPLK
Sbjct 361 VITLRKTILAQVSRRSKEKILLKFIDTSSKFGHGRFQTRAEKKAVMGPLK 410
> cel:F13B10.2 rpl-3; Ribosomal Protein, Large subunit family
member (rpl-3); K02925 large subunit ribosomal protein L3e
Length=401
Score = 504 bits (1297), Expect = 3e-142, Method: Compositional matrix adjust.
Identities = 241/391 (61%), Positives = 301/391 (76%), Gaps = 7/391 (1%)
Query 16 MSHRKFERPRHGSLGFCPRKRCRRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHIVREV 75
MSHRKF PRHG +GF P+KR R +RG++KAFPKDD SKP HLTAF+GYKAGMTHIVR+V
Sbjct 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query 76 ERPGSKLHKKEVVEAVTIVESPPMVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFYK 135
++PGSK++KKEVVEAVTIVE+PPMV G+ GY++TPQG RAL+T+WA HLSEE RRRFY
Sbjct 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query 136 NWYKSKKKAFTRYSKKYAENNK---MQAEIDSIKQHCAVIRAICHTQPSKTPTGLRKAHI 192
NW KSKKKAFT+Y+KK+ + + ++A+ +K++C+ IR I HTQ +KAH+
Sbjct 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHL 180
Query 193 MEIQVNGGTVADKVDFVTKMFESPVPISAVFEQDEMLDVIGVTKGHGVKGVVSRFGVTRL 252
+EIQVNGGT+ KVD+ + E V + VF QDEM+D IGVT+GHG KGV SR+ +L
Sbjct 181 VEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKL 240
Query 253 PRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGSGS----DPRNG 308
PRKTH+GLRKVACIGAWHP+RV F V R GQKG+ HRT +N K+YRIG + NG
Sbjct 241 PRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNG 300
Query 309 STDADLTEKRITPMGGFPHYGEVRSDFIMIKGCIVGCKKRPITMRKTLVPRTSRRALENI 368
ST+ DLT+K ITPMGGFP YG V D+IM++G ++G KKR IT+RK+L+ +T R A E I
Sbjct 301 STEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKI 360
Query 369 HLKFIDTSSKWGHGRFQTSDEKAKFYGPLKR 399
+LK+IDTSSK GHGRFQT+ EK F G LKR
Sbjct 361 NLKWIDTSSKTGHGRFQTTAEKRAFMGKLKR 391
> mmu:66211 Rpl3l, 1110057H16Rik; ribosomal protein L3-like; K02925
large subunit ribosomal protein L3e
Length=407
Score = 491 bits (1264), Expect = 2e-138, Method: Compositional matrix adjust.
Identities = 249/394 (63%), Positives = 307/394 (77%), Gaps = 10/394 (2%)
Query 16 MSHRKFERPRHGSLGFCPRKRCRRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHIVREV 75
MSHRKF PRHG LGF P KR RRHRGKVK++P+DDPS+P HLTAF+GYKAGMTH +REV
Sbjct 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKSWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query 76 ERPGSKLHKKEVVEAVTIVESPPMVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFYK 135
RPG K+ K+E VEAVTIVE+PP+V VG+VGY+ TP+GLR+ T++A HLS+ECRRRFYK
Sbjct 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query 136 NWYKSKKKAFTRYSKKYAENN---KMQAEIDSIKQHCAVIRAICHTQPSKTPTGLRKAHI 192
+W+KSKKKAFT+ K++ + + ++Q + ++K++C VIR I HTQ P +KAHI
Sbjct 121 DWHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180
Query 193 MEIQVNGGTVADKVDFVTKMFESPVPISAVFEQDEMLDVIGVTKGHGVKGVVSRFGVTRL 252
MEIQ+NGGTVA+KV +V E VP+ +VF Q E++DVI VTKG GVKGV SR+ +L
Sbjct 181 MEIQLNGGTVAEKVAWVQARMEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 240
Query 253 PRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGSG---SDPR--- 306
PRKTH+GLRKVACIGAWHPARV + R GQKGY HRTE+NKK+YRIG G D +
Sbjct 241 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKMVR 300
Query 307 -NGSTDADLTEKRITPMGGFPHYGEVRSDFIMIKGCIVGCKKRPITMRKTLVPRTSRRAL 365
N ST D+T+K ITP+GGFPHYGEV +DFIM+KGCI G KKR IT+RK+L+ SRRAL
Sbjct 301 NNASTSYDVTDKSITPLGGFPHYGEVNNDFIMLKGCIAGTKKRVITLRKSLLVHHSRRAL 360
Query 366 ENIHLKFIDTSSKWGHGRFQTSDEKAKFYGPLKR 399
ENI LKFIDT+SK+GHG FQT+ EK F GP K+
Sbjct 361 ENIELKFIDTTSKFGHGCFQTAQEKRAFMGPQKK 394
> hsa:6123 RPL3L; ribosomal protein L3-like; K02925 large subunit
ribosomal protein L3e
Length=407
Score = 485 bits (1248), Expect = 1e-136, Method: Compositional matrix adjust.
Identities = 243/394 (61%), Positives = 302/394 (76%), Gaps = 10/394 (2%)
Query 16 MSHRKFERPRHGSLGFCPRKRCRRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHIVREV 75
MSHRKF PRHG LGF P KR RHRGKVK +P+DDPS+P HLTAF+GYKAGMTH +REV
Sbjct 1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query 76 ERPGSKLHKKEVVEAVTIVESPPMVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFYK 135
RPG K+ K+E VEAVTIVE+PP+V VG+VGY+ TP+GLR+ T++A HLS+ECRRRFYK
Sbjct 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query 136 NWYKSKKKAFTRYSKKYAENN---KMQAEIDSIKQHCAVIRAICHTQPSKTPTGLRKAHI 192
+W+KSKKKAFT+ K++ + + ++Q + ++K++C VIR I HTQ P +KAHI
Sbjct 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180
Query 193 MEIQVNGGTVADKVDFVTKMFESPVPISAVFEQDEMLDVIGVTKGHGVKGVVSRFGVTRL 252
MEIQ+NGGTVA+KV + E VP+ +VF Q E++DVI VTKG GVKGV SR+ +L
Sbjct 181 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 240
Query 253 PRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGSGSD-------P 305
PRKTH+GLRKVACIGAWHPARV + R GQKGY HRTE+NKK++RIG G
Sbjct 241 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRGPHMEDGKLVK 300
Query 306 RNGSTDADLTEKRITPMGGFPHYGEVRSDFIMIKGCIVGCKKRPITMRKTLVPRTSRRAL 365
N ST D+T K ITP+GGFPHYGEV +DF+M+KGCI G KKR IT+RK+L+ SR+A+
Sbjct 301 NNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAV 360
Query 366 ENIHLKFIDTSSKWGHGRFQTSDEKAKFYGPLKR 399
ENI LKFIDT+SK+GHGRFQT+ EK F GP K+
Sbjct 361 ENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQKK 394
> sce:YOR063W RPL3, MAK8, TCM1, YOR29-14; Rpl3p; K02925 large
subunit ribosomal protein L3e
Length=387
Score = 480 bits (1235), Expect = 5e-135, Method: Compositional matrix adjust.
Identities = 239/385 (62%), Positives = 306/385 (79%), Gaps = 1/385 (0%)
Query 16 MSHRKFERPRHGSLGFCPRKRCRRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHIVREV 75
MSHRK+E PRHG LGF PRKR R +VKAFPKDD SKP LT+F+GYKAGMT IVR++
Sbjct 1 MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDL 60
Query 76 ERPGSKLHKKEVVEAVTIVESPPMVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFYK 135
+RPGSK HK+EVVEAVT+V++PP+V VG+VGY+ETP+GLR+L+TVWA HLS+E +RRFYK
Sbjct 61 DRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query 136 NWYKSKKKAFTRYSKKYAENNK-MQAEIDSIKQHCAVIRAICHTQPSKTPTGLRKAHIME 194
NWYKSKKKAFT+YS KYA++ ++ E+ IK++ +V+R + HTQ KTP +KAH+ E
Sbjct 121 NWYKSKKKAFTKYSAKYAQDGAGIERELARIKKYASVVRVLVHTQIRKTPLAQKKAHLAE 180
Query 195 IQVNGGTVADKVDFVTKMFESPVPISAVFEQDEMLDVIGVTKGHGVKGVVSRFGVTRLPR 254
IQ+NGG++++KVD+ + FE V + +VFEQ+EM+D I VTKGHG +GV R+G +LPR
Sbjct 181 IQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPR 240
Query 255 KTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGSGSDPRNGSTDADL 314
KTHRGLRKVACIGAWHPA V + V R GQ+GY RT +N K+YR+G G D NG+T D
Sbjct 241 KTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGATSFDR 300
Query 315 TEKRITPMGGFPHYGEVRSDFIMIKGCIVGCKKRPITMRKTLVPRTSRRALENIHLKFID 374
T+K ITPMGGF HYGE+++DFIM+KGCI G +KR +T+RK+L TSR+ALE + LK+ID
Sbjct 301 TKKTITPMGGFVHYGEIKNDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKWID 360
Query 375 TSSKWGHGRFQTSDEKAKFYGPLKR 399
T+SK+G GRFQT EK F G LK+
Sbjct 361 TASKFGKGRFQTPAEKHAFMGTLKK 385
> mmu:674810 60S ribosomal protein L3-like
Length=385
Score = 471 bits (1213), Expect = 2e-132, Method: Compositional matrix adjust.
Identities = 246/394 (62%), Positives = 299/394 (75%), Gaps = 28/394 (7%)
Query 16 MSHRKFERPRHGSLGFCPRKRCRRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHIVREV 75
MSHRKF PRHGSLGF PRKR RHRGKVK+FPKDD SKP HLTAF+GYKAGMTHIVREV
Sbjct 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60
Query 76 ERPGSKLHKKEVVEAVTIVESPPMVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFYK 135
+RPGSK++KKEVVE VTIVE+PPMV VG+VGY+ETP+GLR TV+A H+S+EC+RRFYK
Sbjct 61 DRPGSKVNKKEVVEVVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query 136 NWYKSKKKAFTRYSKKYAENN---KMQAEIDSIKQHCAVIRAICHTQPSKTPTGLRKAHI 192
NW+KSKKKAFT+Y KK+ ++ +++ + +S+K++C VIR I HTQ P +K
Sbjct 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLPLRQKKG-- 178
Query 193 MEIQVNGGTVADKVDFVTKMFESPVPISAVFEQDEMLDVIGVTKGHGVKGVVSRFGVTRL 252
+ E VP++ VF QDEM+DVIGVTKG G KGV SR+ +L
Sbjct 179 ----------------ARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 222
Query 253 PRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGSGSDPRNG---- 308
PRKTHRGLRKVACIGAWHPARV F V R GQKGY HRTE+NKK+Y+IG G ++G
Sbjct 223 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 282
Query 309 ---STDADLTEKRITPMGGFPHYGEVRSDFIMIKGCIVGCKKRPITMRKTLVPRTSRRAL 365
STD DL++K I P+GGF HYGEV +DFIM+KGC+VG KKR +T+RK+L+ +T RRAL
Sbjct 283 NNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRAL 342
Query 366 ENIHLKFIDTSSKWGHGRFQTSDEKAKFYGPLKR 399
E I LKFIDT+SK+GHGRFQT +EK F GPLK+
Sbjct 343 EKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLKK 376
> cpv:cgd5_1580 hypothetical protein
Length=305
Score = 470 bits (1210), Expect = 4e-132, Method: Compositional matrix adjust.
Identities = 213/302 (70%), Positives = 258/302 (85%), Gaps = 0/302 (0%)
Query 99 MVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFYKNWYKSKKKAFTRYSKKYAENNKM 158
M+CVG VGYIETP GLRAL+TV+AG+LSEEC+RRFYKN+Y+SK+KAFT+Y++ YAEN +M
Sbjct 1 MICVGFVGYIETPNGLRALTTVFAGYLSEECKRRFYKNYYRSKRKAFTKYARNYAENQRM 60
Query 159 QAEIDSIKQHCAVIRAICHTQPSKTPTGLRKAHIMEIQVNGGTVADKVDFVTKMFESPVP 218
+AEI KQ+C VIRA+CHTQ SKT +KA IMEIQVNGGTV+DK+DF + FE P+P
Sbjct 61 EAEIARCKQYCTVIRALCHTQVSKTGLNKKKADIMEIQVNGGTVSDKIDFCVRCFEQPIP 120
Query 219 ISAVFEQDEMLDVIGVTKGHGVKGVVSRFGVTRLPRKTHRGLRKVACIGAWHPARVQFQV 278
+S +F ++EM+D+IG++KG G KGV+SR+GVT+LPRKT RG+RKV+CIGAWHPARVQFQV
Sbjct 121 VSTIFNENEMIDIIGISKGKGYKGVISRWGVTKLPRKTRRGVRKVSCIGAWHPARVQFQV 180
Query 279 PRHGQKGYFHRTEMNKKVYRIGSGSDPRNGSTDADLTEKRITPMGGFPHYGEVRSDFIMI 338
PR GQKGY RTE NKK+YRIG G DPRN ST ADLTEK ITPMGGFP YG V DF+M+
Sbjct 181 PRAGQKGYGQRTETNKKIYRIGRGDDPRNASTSADLTEKTITPMGGFPRYGVVNQDFLML 240
Query 339 KGCIVGCKKRPITMRKTLVPRTSRRALENIHLKFIDTSSKWGHGRFQTSDEKAKFYGPLK 398
KGC VGCKKR +T+RK+LVP +R ALE ++LKFIDTSSK+GHGRFQTS EKAK+YGP K
Sbjct 241 KGCTVGCKKRLLTLRKSLVPPVTRSALEVVNLKFIDTSSKFGHGRFQTSAEKAKYYGPCK 300
Query 399 RT 400
R+
Sbjct 301 RS 302
> hsa:653881 60S ribosomal protein L3-like
Length=102
Score = 138 bits (347), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 77/93 (82%), Gaps = 0/93 (0%)
Query 307 NGSTDADLTEKRITPMGGFPHYGEVRSDFIMIKGCIVGCKKRPITMRKTLVPRTSRRALE 366
N STD DL++K I P+GGF HYGEV +DF+M+KGC+VG KKR +T+RK+L+ +T RRALE
Sbjct 1 NASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALE 60
Query 367 NIHLKFIDTSSKWGHGRFQTSDEKAKFYGPLKR 399
I LKFIDT+SK+GHGRFQT +EK F GPLK+
Sbjct 61 KIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLKK 93
> xla:494992 mrpl3; mitochondrial ribosomal protein L3
Length=341
Score = 37.7 bits (86), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query 220 SAVFEQDEMLDVIGVTKGHGVKGVVSRFGVTRLP-----RKTHRGLRKVACIGAWHPARV 274
+A F + +DV T G G +GV+ R+G P KTH R+ I + PARV
Sbjct 190 AAHFRPGQFVDVTAKTIGKGFQGVMKRWGYKGQPASHGQTKTH---RRPGAISSGDPARV 246
Query 275 QFQVPRHGQKGYFHRTEMNKKVYRIGS 301
G+ G +RT KV+R+ +
Sbjct 247 FPGTKMPGRMGNIYRTSYALKVWRVNT 273
> hsa:11222 MRPL3, MRL3, RPML3; mitochondrial ribosomal protein
L3
Length=348
Score = 35.0 bits (79), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query 220 SAVFEQDEMLDVIGVTKGHGVKGVVSRFGVTRLP-----RKTHRGLRKVACIGAWHPARV 274
+A F + +DV T G G +GV+ R+G P KTH R+ + RV
Sbjct 195 AAHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTH---RRPGAVATGDIGRV 251
Query 275 QFQVPRHGQKGYFHRTEMNKKVYRIGS 301
G+ G +RTE KV+RI +
Sbjct 252 WPGTKMPGKMGNIYRTEYGLKVWRINT 278
> pfa:PF13_0003 VAR; erythrocyte membrane protein 1, PfEMP1; K13850
erythrocyte membrane protein 1
Length=3346
Score = 33.9 bits (76), Expect = 1.0, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
Query 132 RFYKNWYKSKKKAFTRYSKKYAENNKMQAEIDSIKQH 168
RFYK W KK+ F + SKKY + EID +K +
Sbjct 1891 RFYKKWISRKKEEFDKQSKKY------ENEIDDVKHN 1921
> pfa:PFL1960w VAR; erythrocyte membrane protein 1, PfEMP1; K13850
erythrocyte membrane protein 1
Length=2359
Score = 33.5 bits (75), Expect = 1.6, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query 114 LRALSTVWAGHLSEECRRR--FYKNWYKSKKKAFT-RYSKKYAENNKMQAEIDSIKQHCA 170
L A T+ L C R FYK W + KK+ FT +Y+ + K Q E ++ K+ C
Sbjct 1425 LDADPTIVRDFLCSTCGRHCSFYKKWIQRKKEEFTEQYNAYGGQKTKCQTESETAKEFCG 1484
Query 171 VI 172
+
Sbjct 1485 TL 1486
> pfa:MAL7P1.176 eba-175, eba_175, eba175; erythrocyte binding
antigen 175; K13847 erythrocyte-binding antigen 175
Length=1502
Score = 33.1 bits (74), Expect = 1.7, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
Query 127 EECRRR--FYKNWYKSKKKAFTRYSKKYAE-----NNKMQAEIDSIK 166
+ C+R+ YK W KK+ + + +K+Y E N KM +E SIK
Sbjct 660 DNCKRKCNSYKEWISKKKEEYNKQAKQYQEYQKGNNYKMYSEFKSIK 706
> pfa:PFB1055c erythrocyte membrane protein 1, PfEMP1; K13850
erythrocyte membrane protein 1
Length=2177
Score = 32.7 bits (73), Expect = 2.3, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query 125 LSEECRR--RFYKNWYKSKKKAFTRYSKKYAEN-NKMQAEIDSIKQHCAV 171
L C R RFYK W +K+ F + S Y+E K + E DS +++ V
Sbjct 1313 LCPTCARHCRFYKKWINTKRDEFNKQSNAYSEQKKKYEEENDSAQKNNGV 1362
> pfa:PF08_0140 VAR; erythrocyte membrane protein 1, PfEMP1; K13850
erythrocyte membrane protein 1
Length=2980
Score = 32.7 bits (73), Expect = 2.4, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query 127 EECRRRFYKNWYKSKKKAFTRYSKKYAENN-KMQAE 161
EECR+ YK W + KK FT++S Y + K QA+
Sbjct 2079 EECRK--YKKWIERKKDEFTKHSNAYGDQKAKCQAK 2112
> pfa:PFD1015c VAR; erythrocyte membrane protein 1, PfEMP1; K13850
erythrocyte membrane protein 1
Length=2193
Score = 32.7 bits (73), Expect = 2.9, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query 129 CRR--RFYKNWYKSKKKAFTRYSKKYA-ENNKMQAEIDSIKQHCAVIR 173
C R RFYK W + KK FT Y+ + K + +S KQ C ++
Sbjct 1295 CARHCRFYKKWIERKKDEFTEQKNAYSKQKEKCKEGSESSKQFCGTLK 1342
> dre:336283 mrpl3, fj61d01, wu:fj61d01, zgc:66423; mitochondrial
ribosomal protein L3
Length=319
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Query 220 SAVFEQDEMLDVIGVTKGHGVKGVVSRFGVTRLP-----RKTHRGLRKVACIGAWHPARV 274
+A F + +DV T G G +GV+ R+G P KTHR R A PA+V
Sbjct 169 AAHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPASHGQTKTHR--RPGALGPGGDPAKV 226
Query 275 QFQVPRHGQKGYFHRTEMNKKVYRIGS 301
G+ G + T K++R+ +
Sbjct 227 FKGTKMPGRMGNVYNTNFGLKIWRVNT 253
> mmu:94062 Mrpl3, 2010320L16Rik, 5930422H18Rik, AA407889; mitochondrial
ribosomal protein L3
Length=348
Score = 32.0 bits (71), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query 220 SAVFEQDEMLDVIGVTKGHGVKGVVSRFGVTRLP-----RKTHRGLRKVACIGAWHPARV 274
+A F + +DV T G G +GV+ R+G P KTH R+ I ARV
Sbjct 195 AAHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPASHGQTKTH---RRPGAISTGDIARV 251
Query 275 QFQVPRHGQKGYFHRTEMNKKVYRIGS 301
G+ G +RT KV+R+ +
Sbjct 252 WPGTKMPGRMGNQNRTVYGLKVWRVNT 278
> pfa:MAL7P1.187 VAR; erythrocyte membrane protein 1, PfEMP1;
K13850 erythrocyte membrane protein 1
Length=2595
Score = 31.2 bits (69), Expect = 6.6, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 9/66 (13%)
Query 128 ECRRRFYKNWYKSKKKAFTRYSKKY------AENNKMQAEIDSIKQHCAVIRAICHT-QP 180
ECR+ YKNW K K+K F ++Y AE N E + + C ++ +P
Sbjct 1305 ECRK--YKNWIKGKRKEFEEQKQEYSKQKTDAEGNNNGNEFYTKLEECPEVKDFLQKLEP 1362
Query 181 SKTPTG 186
K G
Sbjct 1363 CKKDNG 1368
Lambda K H
0.322 0.137 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 18188452224
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40