bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_0751_orf1
Length=249
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_073090 cell division protein 48, putative (EC:3.4.2... 497 1e-140
cpv:cgd1_330 CDC48 like AAA ATPase ortholog ; K13525 transitio... 466 3e-131
pfa:PFF0940c cell division cycle protein 48 homologue, putativ... 462 4e-130
tpv:TP01_0937 cell division cycle protein 48; K13525 transitio... 456 3e-128
bbo:BBOV_IV008360 23.m05756; cell division control protein 48;... 433 3e-121
ath:AT5G03340 cell division cycle protein 48, putative / CDC48... 426 4e-119
ath:AT3G53230 cell division cycle protein 48, putative / CDC48... 421 2e-117
cel:C41C4.8 cdc-48.2; Cell Division Cycle related family membe... 398 8e-111
ath:AT3G09840 CDC48; CDC48 (CELL DIVISION CYCLE 48); ATPase/ i... 397 2e-110
dre:327197 vcp, CDC48, wu:fd16d05, wu:fj63d11; valosin contain... 383 3e-106
mmu:269523 Vcp, 3110001E05, CDC48, p97, p97/VCP; valosin conta... 382 7e-106
hsa:7415 VCP, IBMPFD, MGC131997, MGC148092, MGC8560, TERA, p97... 382 7e-106
xla:380491 vcp, MGC52611; valosin containing protein; K13525 t... 380 3e-105
sce:YDL126C CDC48; ATPase in ER, nuclear membrane and cytosol ... 368 9e-102
cel:C06A1.1 cdc-48.1; Cell Division Cycle related family membe... 367 3e-101
dre:563679 MGC136908; zgc:136908 363 2e-100
tgo:TGME49_121640 cell division protein 48, putative ; K13525 ... 345 9e-95
bbo:BBOV_IV001700 21.m02769; cell division cycle protein ATPas... 335 7e-92
tpv:TP03_0490 cell division cycle protein 48; K13525 transitio... 325 8e-89
pfa:PF07_0047 cell division cycle ATPase, putative 292 7e-79
hsa:166378 SPATA5, AFG2, SPAF; spermatogenesis associated 5; K... 266 6e-71
mmu:57815 Spata5, 2510048F20Rik, C78064, Spaf; spermatogenesis... 264 3e-70
bbo:BBOV_III010880 17.m07936; ATPase, AAA family protein 250 3e-66
tgo:TGME49_035610 ATPase, AAA family domain-containing protein 249 9e-66
cpv:cgd4_1730 CDC48 like AAA ATpase 241 1e-63
cpv:cgd5_2010 nuclear VCP like protein with 2 AAA ATpase domai... 236 6e-62
ath:AT1G03000 PEX6; PEX6 (PEROXIN 6); ATP binding / ATPase/ nu... 231 2e-60
cel:K04G2.3 cdc-48.3; Cell Division Cycle related family membe... 230 3e-60
sce:YLR397C AFG2, DRG1; ATPase of the CDC48/PAS1/SEC18 (AAA) f... 230 3e-60
sce:YNL329C PEX6, PAS8; AAA-peroxin that heterodimerizes with ... 227 3e-59
xla:379269 nvl, MGC52979; nuclear VCP-like; K14571 ribosome bi... 225 1e-58
dre:406805 nvl, wu:fa20g10, zgc:55732; nuclear VCP-like; K1457... 225 1e-58
hsa:4931 NVL; nuclear VCP-like; K14571 ribosome biogenesis ATPase 224 2e-58
cel:Y48C3A.7 mac-1; Member of AAA family binding CED-4 family ... 222 1e-57
bbo:BBOV_IV011460 23.m06332; ATPase AAA type domain containing... 221 2e-57
tpv:TP01_1158 AAA family ATPase; K14571 ribosome biogenesis AT... 219 5e-57
sce:YLL034C RIX7; Putative ATPase of the AAA family, required ... 219 8e-57
tpv:TP02_0059 hypothetical protein 217 3e-56
ath:AT3G56690 CIP111; CIP111 (CAM INTERACTING PROTEIN 111); AT... 215 1e-55
mmu:67459 Nvl, 1200009I24Rik; nuclear VCP-like; K14571 ribosom... 215 1e-55
mmu:224824 Pex6, AI132582, D130055I09Rik, KIAA4177, MGC6455, m... 214 3e-55
hsa:5190 PEX6, PAF-2, PAF2, PXAAA1; peroxisomal biogenesis fac... 214 3e-55
pfa:PF14_0126 AAA family ATPase, putative 208 2e-53
dre:792998 si:ch73-197b13.2; K13339 peroxin-6 207 2e-53
mmu:71382 Pex1, 5430414H02Rik, E330005K07Rik, MGC102188, ZWS1;... 202 6e-52
ath:AT2G03670 CDC48B; CDC48B; ATP binding / ATPase/ nucleoside... 202 7e-52
hsa:5189 PEX1, ZWS, ZWS1; peroxisomal biogenesis factor 1; K13... 201 2e-51
pfa:MAL8P1.92 ATPase, putative 199 6e-51
tgo:TGME49_055210 peroxisomal-type ATPase, putative (EC:2.7.1.... 199 9e-51
xla:443867 pex1, MGC79116; peroxisomal biogenesis factor 1; K1... 196 5e-50
> tgo:TGME49_073090 cell division protein 48, putative (EC:3.4.21.53);
K13525 transitional endoplasmic reticulum ATPase
Length=811
Score = 497 bits (1280), Expect = 1e-140, Method: Compositional matrix adjust.
Identities = 236/246 (95%), Positives = 244/246 (99%), Gaps = 0/246 (0%)
Query 4 SSTHGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCN 63
++THGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHF+SALQ CN
Sbjct 407 ANTHGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFTSALQCCN 466
Query 64 PSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPP 123
PSSLRETVVEVPNVKWDDIGGLE+VKRNLQEMILYPIDHPEK+EKFGM PSRGVLFYGPP
Sbjct 467 PSSLRETVVEVPNVKWDDIGGLEDVKRNLQEMILYPIDHPEKYEKFGMSPSRGVLFYGPP 526
Query 124 GCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELD 183
GCGKTLLAKAVASECSANF+SIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELD
Sbjct 527 GCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELD 586
Query 184 SIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLD 243
SIGTQRGNSLGDAGGAGDRVMNQ+LTEIDGVGPMKNLFF+GATNRPELLDEALLRPGRLD
Sbjct 587 SIGTQRGNSLGDAGGAGDRVMNQMLTEIDGVGPMKNLFFIGATNRPELLDEALLRPGRLD 646
Query 244 QLIYIP 249
QLIYIP
Sbjct 647 QLIYIP 652
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 113/181 (62%), Gaps = 3/181 (1%)
Query 68 RETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGK 127
RE + V +DDIGG + ++EMI P+ HP F+ G+ P RGVL YGPPG GK
Sbjct 198 REEEERLDEVGYDDIGGCRKQMAQIREMIELPLRHPTLFKTLGVKPPRGVLLYGPPGSGK 257
Query 128 TLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGT 187
TL+AKAVA+E A F I GPE+++ GE+E+N+R F++A +P ++F DE+DSI
Sbjct 258 TLIAKAVANETGAFFFLINGPEVMSKMAGEAESNLRRAFEEAEKNAPAIIFIDEIDSIAP 317
Query 188 QRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIY 247
+R + G+ RV++QLLT +DG+ + +GATNR +D AL R GR D+ I
Sbjct 318 KREKTNGE---VERRVVSQLLTLMDGLKGRGQVVVIGATNRQNSIDPALRRFGRFDREID 374
Query 248 I 248
I
Sbjct 375 I 375
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 0/27 (0%)
Query 4 SSTHGFVGADLAQLCTEAALSCIREKM 30
T GF GADLA+LC AA + IR+ +
Sbjct 683 QKTAGFSGADLAELCQRAAKAAIRDAI 709
> cpv:cgd1_330 CDC48 like AAA ATPase ortholog ; K13525 transitional
endoplasmic reticulum ATPase
Length=820
Score = 466 bits (1200), Expect = 3e-131, Method: Compositional matrix adjust.
Identities = 219/246 (89%), Positives = 239/246 (97%), Gaps = 0/246 (0%)
Query 4 SSTHGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCN 63
++THGFVGADLAQLCTEAAL CIREKMD+ID+ED+TIDA +L+SMAV+Q+HF+SAL CN
Sbjct 421 ANTHGFVGADLAQLCTEAALCCIREKMDVIDMEDETIDAVILDSMAVSQDHFNSALGVCN 480
Query 64 PSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPP 123
PSSLRETVVEVPN+KWDDIGGLEEVKRNLQEMILYPI+HPEKFE+FGM PSRGVLFYGPP
Sbjct 481 PSSLRETVVEVPNIKWDDIGGLEEVKRNLQEMILYPIEHPEKFERFGMSPSRGVLFYGPP 540
Query 124 GCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELD 183
GCGKTLLAKAVASECSANFIS+KGPELLT+WFGESEANVREVFDKARAA+PCVLFFDELD
Sbjct 541 GCGKTLLAKAVASECSANFISVKGPELLTLWFGESEANVREVFDKARAAAPCVLFFDELD 600
Query 184 SIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLD 243
SIGTQRG+S+GDAGGAGDRVMNQLLTEIDGVG KNLFF+GATNRPE+LDEALLRPGRLD
Sbjct 601 SIGTQRGSSMGDAGGAGDRVMNQLLTEIDGVGVKKNLFFIGATNRPEILDEALLRPGRLD 660
Query 244 QLIYIP 249
QLIYIP
Sbjct 661 QLIYIP 666
Score = 153 bits (387), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 114/181 (62%), Gaps = 3/181 (1%)
Query 68 RETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGK 127
RE ++ ++ +DDIGG + ++EMI P+ HP F+ G+ P RGVL YGPPG GK
Sbjct 212 REDEEKMDDIGYDDIGGCRKQMAQIREMIELPLRHPGLFKALGVKPPRGVLLYGPPGSGK 271
Query 128 TLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGT 187
TL+AKAVA+E A F I GPE+++ GE+E N+R F++A SP ++F DE+DSI
Sbjct 272 TLIAKAVANETGAFFFLINGPEVMSKMAGEAEGNLRRAFEEAEKNSPAIIFIDEIDSIAP 331
Query 188 QRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIY 247
+R + G+ RV++QLLT +DG+ + + ATNRP +D AL R GR D+ I
Sbjct 332 KREKTNGE---VERRVVSQLLTLMDGLKGRGQVVVIAATNRPNSIDPALRRFGRFDREID 388
Query 248 I 248
I
Sbjct 389 I 389
Score = 35.0 bits (79), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 14/73 (19%)
Query 4 SSTHGFVGADLAQLCTEAALSCIREKMDLIDLE-----------DDTIDAQVLNSMAVTQ 52
T GF GADLA+LC AA + IR+ + +L+ +D +D+ + + +
Sbjct 697 QKTEGFSGADLAELCQRAAKAAIRDAIAAEELKKASGDDSAMKIEDEVDSHIYE---IGR 753
Query 53 EHFSSALQSCNPS 65
+HF A S
Sbjct 754 KHFEEAFAGARRS 766
> pfa:PFF0940c cell division cycle protein 48 homologue, putative;
K13525 transitional endoplasmic reticulum ATPase
Length=828
Score = 462 bits (1190), Expect = 4e-130, Method: Compositional matrix adjust.
Identities = 219/246 (89%), Positives = 234/246 (95%), Gaps = 0/246 (0%)
Query 4 SSTHGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCN 63
S+THGFVGADLAQLCTEAAL+CIREKMD+IDLED+ ID +VL SM VTQ+HF+ AL +CN
Sbjct 404 SNTHGFVGADLAQLCTEAALTCIREKMDVIDLEDEIIDKEVLESMCVTQDHFNMALGTCN 463
Query 64 PSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPP 123
PSSLRETVVEVPNVKWDDIGGL+EVK L+EMILYPIDHP+KFEKFGM PSRGVLFYGPP
Sbjct 464 PSSLRETVVEVPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPP 523
Query 124 GCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELD 183
GCGKTLLAKAVASECSANF+SIKGPELLTMWFGESEANVREVFDKARAA+PCVLFFDELD
Sbjct 524 GCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELD 583
Query 184 SIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLD 243
SIGTQRG+SLGD GAGDRVMNQLLTEIDGVGP KNLFF+GATNRPELLDEALLRPGRLD
Sbjct 584 SIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLD 643
Query 244 QLIYIP 249
QLIYIP
Sbjct 644 QLIYIP 649
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 113/181 (62%), Gaps = 3/181 (1%)
Query 68 RETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGK 127
R+ ++ + +DDIGG ++ ++EMI P+ HP F+ G+ P RGVL YGPPG GK
Sbjct 195 RDDEEKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGK 254
Query 128 TLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGT 187
T +A+AVA+E A F I GPE+++ GE+EAN+R F++A SP ++F DE+DSI
Sbjct 255 TCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAP 314
Query 188 QRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIY 247
+R + G+ RV++QLLT +DG+ + + ATNR +D AL R GR D+ I
Sbjct 315 KREKTNGEVER---RVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREID 371
Query 248 I 248
I
Sbjct 372 I 372
> tpv:TP01_0937 cell division cycle protein 48; K13525 transitional
endoplasmic reticulum ATPase
Length=811
Score = 456 bits (1174), Expect = 3e-128, Method: Compositional matrix adjust.
Identities = 211/246 (85%), Positives = 236/246 (95%), Gaps = 0/246 (0%)
Query 4 SSTHGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCN 63
+++HGFVGADLAQLCTE+ALSCIREKM +IDLEDDTID+ +L+S+AVTQEHF++A+ +CN
Sbjct 416 ANSHGFVGADLAQLCTESALSCIREKMGVIDLEDDTIDSSILDSLAVTQEHFNNAMNTCN 475
Query 64 PSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPP 123
PSSLRETVVE+PNVKWDDIGGLE+VK +L+EMILYPI+HPEKFEKFGM PSRGVLFYGPP
Sbjct 476 PSSLRETVVEIPNVKWDDIGGLEQVKASLREMILYPIEHPEKFEKFGMSPSRGVLFYGPP 535
Query 124 GCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELD 183
GCGKTLLAKAVASECSANFIS+KGPELLTMWFGESEANVREVFDKAR ++PCVLFFDELD
Sbjct 536 GCGKTLLAKAVASECSANFISVKGPELLTMWFGESEANVREVFDKARTSAPCVLFFDELD 595
Query 184 SIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLD 243
SIGT RGN++GDAGGAGDRVMNQLLTEIDGVG KN+FF+GATNRP LLDEALLRPGRLD
Sbjct 596 SIGTSRGNNVGDAGGAGDRVMNQLLTEIDGVGAKKNIFFIGATNRPNLLDEALLRPGRLD 655
Query 244 QLIYIP 249
QLIYIP
Sbjct 656 QLIYIP 661
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 112/181 (61%), Gaps = 3/181 (1%)
Query 68 RETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGK 127
RE ++ +V +DDIGG ++EMI P+ HP F+ G+ P RGVL YGPPG GK
Sbjct 207 REDEEKLDDVGYDDIGGCRRQMAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGK 266
Query 128 TLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGT 187
TL+A+AVA+E A F I GPE+++ GE+E+N+R F +A +P ++F DE+DSI
Sbjct 267 TLIARAVANETGAFFFLINGPEVMSKMAGEAESNLRRAFAEAEKNAPSIIFIDEIDSIAP 326
Query 188 QRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIY 247
+R + G+ RV++QLLT +DG+ + + ATNR +D AL R GR D+ I
Sbjct 327 KREKTNGE---VERRVVSQLLTLMDGLKGRGQVVVIAATNRQNSIDPALRRFGRFDKEID 383
Query 248 I 248
I
Sbjct 384 I 384
> bbo:BBOV_IV008360 23.m05756; cell division control protein 48;
K13525 transitional endoplasmic reticulum ATPase
Length=804
Score = 433 bits (1113), Expect = 3e-121, Method: Compositional matrix adjust.
Identities = 204/246 (82%), Positives = 223/246 (90%), Gaps = 0/246 (0%)
Query 4 SSTHGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCN 63
+++HGFVGADLAQLCTEAAL CIREKM IDLE+DTID +L+SMAVTQEHF++A+ +CN
Sbjct 411 ANSHGFVGADLAQLCTEAALGCIREKMGAIDLEEDTIDTAILDSMAVTQEHFNAAIATCN 470
Query 64 PSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPP 123
PSSLRETVVE+PNVKWDDIGGLE VK +L+EMILYPI+HPEKFEKFGM PSRGVLFYGPP
Sbjct 471 PSSLRETVVEIPNVKWDDIGGLESVKNSLREMILYPIEHPEKFEKFGMSPSRGVLFYGPP 530
Query 124 GCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELD 183
GCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKAR ++PCVLFFDELD
Sbjct 531 GCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARTSAPCVLFFDELD 590
Query 184 SIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLD 243
SIG R G+ AGDRVMNQLLTEIDGV KN+FF+GATNRP LLDEALLRPGRLD
Sbjct 591 SIGAARSGGAGEGTVAGDRVMNQLLTEIDGVSAKKNIFFIGATNRPNLLDEALLRPGRLD 650
Query 244 QLIYIP 249
QLIYIP
Sbjct 651 QLIYIP 656
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 112/181 (61%), Gaps = 3/181 (1%)
Query 68 RETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGK 127
R+ ++ +V +DDIGG ++EMI P+ HP F+ G+ P RGVL YGPPG GK
Sbjct 202 RDEEEKLDDVGYDDIGGCRRQMAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGK 261
Query 128 TLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGT 187
TL+A+AVA+E A F I GPE+++ GE+E+N+R F +A +P ++F DE+DSI
Sbjct 262 TLIARAVANETGAYFFLINGPEVMSKMAGEAESNLRRAFAEAEKNAPAIIFIDEVDSIAP 321
Query 188 QRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIY 247
+R + G+ RV++QLLT +DG+ + + ATNR +D AL R GR D+ I
Sbjct 322 KREKTNGE---VERRVVSQLLTLMDGLKGRGQVVVIAATNRQNSIDPALRRFGRFDKEID 378
Query 248 I 248
I
Sbjct 379 I 379
Score = 33.1 bits (74), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query 1 SWLS-STHGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLN-SMAVTQEHFSSA 58
S+L+ T GF GADLA++C AA S IR+ + + T + + + ++HF
Sbjct 683 SYLAQKTAGFSGADLAEMCQIAARSAIRDAIAYEEKHGKTPTEGTPDFTYEIQRKHFQEG 742
Query 59 LQSCNPSSLRETVVEVPNVKWDD 81
L ++ R +V K+D+
Sbjct 743 L-----ANARHSVTSTDLAKFDN 760
> ath:AT5G03340 cell division cycle protein 48, putative / CDC48,
putative; K13525 transitional endoplasmic reticulum ATPase
Length=810
Score = 426 bits (1095), Expect = 4e-119, Method: Compositional matrix adjust.
Identities = 193/244 (79%), Positives = 221/244 (90%), Gaps = 0/244 (0%)
Query 6 THGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCNPS 65
THG+VGADLA LCTEAAL CIREKMD+IDLEDD+IDA++LNSMAV+ EHF +AL + NPS
Sbjct 406 THGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVSNEHFHTALGNSNPS 465
Query 66 SLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGC 125
+LRETVVEVPNV W+DIGGLE VKR LQE + YP++HPEKFEKFGM PS+GVLFYGPPGC
Sbjct 466 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 525
Query 126 GKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSI 185
GKTLLAKA+A+EC ANFIS+KGPELLTMWFGESEANVRE+FDKAR ++PCVLFFDELDSI
Sbjct 526 GKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 585
Query 186 GTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQL 245
TQRGNS GDAGGA DRV+NQLLTE+DG+ K +F +GATNRP+++D ALLRPGRLDQL
Sbjct 586 ATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQL 645
Query 246 IYIP 249
IYIP
Sbjct 646 IYIP 649
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Query 68 RETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGK 127
RE + V +DD+GG+ + ++E++ P+ HP+ F+ G+ P +G+L YGPPG GK
Sbjct 195 REDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 254
Query 128 TLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGT 187
TL+A+AVA+E A F I GPE+++ GESE+N+R+ F++A +P ++F DE+DSI
Sbjct 255 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 314
Query 188 QRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIY 247
+R + G+ R+++QLLT +DG+ ++ +GATNRP +D AL R GR D+ I
Sbjct 315 KREKTNGE---VERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREID 371
Query 248 I 248
I
Sbjct 372 I 372
> ath:AT3G53230 cell division cycle protein 48, putative / CDC48,
putative; K13525 transitional endoplasmic reticulum ATPase
Length=815
Score = 421 bits (1081), Expect = 2e-117, Method: Compositional matrix adjust.
Identities = 191/244 (78%), Positives = 221/244 (90%), Gaps = 0/244 (0%)
Query 6 THGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCNPS 65
THG+VGADLA LCTEAAL CIREKMD+IDL+D+ IDA++LNSMAV+ +HF +AL + NPS
Sbjct 407 THGYVGADLAALCTEAALQCIREKMDVIDLDDEEIDAEILNSMAVSNDHFQTALGNSNPS 466
Query 66 SLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGC 125
+LRETVVEVPNV W+DIGGLE VKR LQE + YP++HPEKFEKFGM PS+GVLFYGPPGC
Sbjct 467 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 526
Query 126 GKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSI 185
GKTLLAKA+A+EC ANFISIKGPELLTMWFGESEANVRE+FDKAR ++PCVLFFDELDSI
Sbjct 527 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
Query 186 GTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQL 245
TQRGNS+GDAGGA DRV+NQLLTE+DG+ K +F +GATNRP+++D ALLRPGRLDQL
Sbjct 587 ATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQL 646
Query 246 IYIP 249
IYIP
Sbjct 647 IYIP 650
Score = 155 bits (393), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 118/181 (65%), Gaps = 3/181 (1%)
Query 68 RETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGK 127
RE + V +DD+GG+ + ++E++ P+ HP+ F+ G+ P +G+L YGPPG GK
Sbjct 196 REDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
Query 128 TLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGT 187
TL+A+AVA+E A F I GPE+++ GESE+N+R+ F++A +P ++F DE+DSI
Sbjct 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
Query 188 QRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIY 247
+R + G+ R+++QLLT +DG+ ++ +GATNRP +D AL R GR D+ I
Sbjct 316 KREKTHGE---VERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREID 372
Query 248 I 248
I
Sbjct 373 I 373
> cel:C41C4.8 cdc-48.2; Cell Division Cycle related family member
(cdc-48.2); K13525 transitional endoplasmic reticulum ATPase
Length=810
Score = 398 bits (1023), Expect = 8e-111, Method: Compositional matrix adjust.
Identities = 183/243 (75%), Positives = 213/243 (87%), Gaps = 0/243 (0%)
Query 7 HGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCNPSS 66
HGFVGADLA LC+EAA+ IREKM+LIDLEDDTIDA+VLNS+AVT E+F A+ +PS+
Sbjct 409 HGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTMENFRFAMGKSSPSA 468
Query 67 LRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCG 126
LRE VVE PN W DIGGL+ VKR LQE++ YP++HPEK+ KFGM PSRGVLFYGPPGCG
Sbjct 469 LREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCG 528
Query 127 KTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIG 186
KTLLAKA+A+EC ANFISIKGPELLTMWFGESEANVR+VFDKARAA+PCVLFFDELDSI
Sbjct 529 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIA 588
Query 187 TQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLI 246
RG S+GDAGGA DRV+NQ+LTE+DG+ KN+F +GATNRP+++D A+LRPGRLDQLI
Sbjct 589 KARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLI 648
Query 247 YIP 249
YIP
Sbjct 649 YIP 651
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 112/172 (65%), Gaps = 3/172 (1%)
Query 77 VKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAVAS 136
V +DD+GG+ + ++EM+ P+ HP+ F+ G+ P RG+L +GPPG GKTL+A+AVA+
Sbjct 206 VGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVAN 265
Query 137 ECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSLGDA 196
E A F I GPE+++ GESE+N+R+ F + SP +LF DE+D+I +R + G+
Sbjct 266 ETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHGE- 324
Query 197 GGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIYI 248
R+++QLLT +DG+ ++ + ATNRP +D AL R GR D+ I I
Sbjct 325 --VEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDI 374
> ath:AT3G09840 CDC48; CDC48 (CELL DIVISION CYCLE 48); ATPase/
identical protein binding; K13525 transitional endoplasmic
reticulum ATPase
Length=809
Score = 397 bits (1020), Expect = 2e-110, Method: Compositional matrix adjust.
Identities = 192/245 (78%), Positives = 219/245 (89%), Gaps = 1/245 (0%)
Query 6 THGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCNPS 65
THG+VGADLA LCTEAAL CIREKMD+IDLEDD+IDA++LNSMAVT EHF +AL + NPS
Sbjct 406 THGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFHTALGNSNPS 465
Query 66 SLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGC 125
+LRETVVEVPNV W+DIGGLE VKR LQE + YP++HPEKFEKFGM PS+GVLFYGPPGC
Sbjct 466 ALRETVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 525
Query 126 GKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSI 185
GKTLLAKA+A+EC ANFIS+KGPELLTMWFGESEANVRE+FDKAR ++PCVLFFDELDSI
Sbjct 526 GKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 585
Query 186 GTQR-GNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQ 244
TQR G S GD GGA DRV+NQLLTE+DG+ K +F +GATNRP+++D ALLRPGRLDQ
Sbjct 586 ATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQ 645
Query 245 LIYIP 249
LIYIP
Sbjct 646 LIYIP 650
Score = 156 bits (394), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 119/181 (65%), Gaps = 3/181 (1%)
Query 68 RETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGK 127
RE + +V +DD+GG+ + ++E++ P+ HP+ F+ G+ P +G+L YGPPG GK
Sbjct 195 REDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 254
Query 128 TLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGT 187
TL+A+AVA+E A F I GPE+++ GESE+N+R+ F++A +P ++F DE+DSI
Sbjct 255 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 314
Query 188 QRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIY 247
+R + G+ R+++QLLT +DG+ ++ +GATNRP +D AL R GR D+ I
Sbjct 315 KREKTNGE---VERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREID 371
Query 248 I 248
I
Sbjct 372 I 372
> dre:327197 vcp, CDC48, wu:fd16d05, wu:fj63d11; valosin containing
protein; K13525 transitional endoplasmic reticulum ATPase
Length=806
Score = 383 bits (984), Expect = 3e-106, Method: Compositional matrix adjust.
Identities = 181/246 (73%), Positives = 216/246 (87%), Gaps = 0/246 (0%)
Query 4 SSTHGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCN 63
+ THG VGADLA LC+EAAL IR+KMDLIDLED+TIDA+V+NS+AVT + F AL N
Sbjct 401 NETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSN 460
Query 64 PSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPP 123
PS+LRETVVEVPN+ W+DIGGL++VKR LQE++ YP++HP+KF KFGM PS+GVLFYGPP
Sbjct 461 PSALRETVVEVPNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPP 520
Query 124 GCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELD 183
GCGKTLLAKA+A+EC ANFISIKGPELLTMWFGESEANVRE+FDKAR A+PCVLFFDELD
Sbjct 521 GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELD 580
Query 184 SIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLD 243
SI RG ++GD GGA DRV+NQ+LTE+DG+ KN+F +GATNRP+++D A+LRPGRLD
Sbjct 581 SIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLD 640
Query 244 QLIYIP 249
QLIYIP
Sbjct 641 QLIYIP 646
Score = 152 bits (385), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 113/172 (65%), Gaps = 3/172 (1%)
Query 77 VKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAVAS 136
V +DDIGG+ + ++EM+ P+ HP F+ G+ P RG+L YGPPG GKTL+A+AVA+
Sbjct 201 VGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query 137 ECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSLGDA 196
E A F I GPE+++ GESE+N+R+ F++A +P ++F DELD+I +R + G+
Sbjct 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEV 320
Query 197 GGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIYI 248
R+++QLLT +DG+ ++ + ATNRP +D AL R GR D+ + I
Sbjct 321 ER---RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDI 369
> mmu:269523 Vcp, 3110001E05, CDC48, p97, p97/VCP; valosin containing
protein; K13525 transitional endoplasmic reticulum ATPase
Length=806
Score = 382 bits (981), Expect = 7e-106, Method: Compositional matrix adjust.
Identities = 182/246 (73%), Positives = 215/246 (87%), Gaps = 0/246 (0%)
Query 4 SSTHGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCN 63
+ THG VGADLA LC+EAAL IR+KMDLIDLED+TIDA+V+NS+AVT + F AL N
Sbjct 401 NETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSN 460
Query 64 PSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPP 123
PS+LRETVVEVP V W+DIGGLE+VKR LQE++ YP++HP+KF KFGM PS+GVLFYGPP
Sbjct 461 PSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPP 520
Query 124 GCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELD 183
GCGKTLLAKA+A+EC ANFISIKGPELLTMWFGESEANVRE+FDKAR A+PCVLFFDELD
Sbjct 521 GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELD 580
Query 184 SIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLD 243
SI RG ++GD GGA DRV+NQ+LTE+DG+ KN+F +GATNRP+++D A+LRPGRLD
Sbjct 581 SIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLD 640
Query 244 QLIYIP 249
QLIYIP
Sbjct 641 QLIYIP 646
Score = 152 bits (383), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 112/172 (65%), Gaps = 3/172 (1%)
Query 77 VKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAVAS 136
V +DDIGG + ++EM+ P+ HP F+ G+ P RG+L YGPPG GKTL+A+AVA+
Sbjct 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query 137 ECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSLGDA 196
E A F I GPE+++ GESE+N+R+ F++A +P ++F DELD+I +R + G+
Sbjct 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEV 320
Query 197 GGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIYI 248
R+++QLLT +DG+ ++ + ATNRP +D AL R GR D+ + I
Sbjct 321 ER---RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDI 369
> hsa:7415 VCP, IBMPFD, MGC131997, MGC148092, MGC8560, TERA, p97;
valosin containing protein; K13525 transitional endoplasmic
reticulum ATPase
Length=806
Score = 382 bits (981), Expect = 7e-106, Method: Compositional matrix adjust.
Identities = 182/246 (73%), Positives = 215/246 (87%), Gaps = 0/246 (0%)
Query 4 SSTHGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCN 63
+ THG VGADLA LC+EAAL IR+KMDLIDLED+TIDA+V+NS+AVT + F AL N
Sbjct 401 NETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSN 460
Query 64 PSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPP 123
PS+LRETVVEVP V W+DIGGLE+VKR LQE++ YP++HP+KF KFGM PS+GVLFYGPP
Sbjct 461 PSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPP 520
Query 124 GCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELD 183
GCGKTLLAKA+A+EC ANFISIKGPELLTMWFGESEANVRE+FDKAR A+PCVLFFDELD
Sbjct 521 GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELD 580
Query 184 SIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLD 243
SI RG ++GD GGA DRV+NQ+LTE+DG+ KN+F +GATNRP+++D A+LRPGRLD
Sbjct 581 SIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLD 640
Query 244 QLIYIP 249
QLIYIP
Sbjct 641 QLIYIP 646
Score = 152 bits (383), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 112/172 (65%), Gaps = 3/172 (1%)
Query 77 VKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAVAS 136
V +DDIGG + ++EM+ P+ HP F+ G+ P RG+L YGPPG GKTL+A+AVA+
Sbjct 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query 137 ECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSLGDA 196
E A F I GPE+++ GESE+N+R+ F++A +P ++F DELD+I +R + G+
Sbjct 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEV 320
Query 197 GGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIYI 248
R+++QLLT +DG+ ++ + ATNRP +D AL R GR D+ + I
Sbjct 321 ER---RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDI 369
> xla:380491 vcp, MGC52611; valosin containing protein; K13525
transitional endoplasmic reticulum ATPase
Length=805
Score = 380 bits (975), Expect = 3e-105, Method: Compositional matrix adjust.
Identities = 181/246 (73%), Positives = 214/246 (86%), Gaps = 0/246 (0%)
Query 4 SSTHGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCN 63
+ THG VGADLA LC+EAAL IR+KMDLIDLED+TIDA+V+NS+AVT + F L N
Sbjct 401 NETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWGLSQSN 460
Query 64 PSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPP 123
PS+LRETVVEVP V W+DIGGLE+VKR LQE++ YP++HP+KF KFGM PS+GVLFYGPP
Sbjct 461 PSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPP 520
Query 124 GCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELD 183
GCGKTLLAKA+A+EC ANFISIKGPELLTMWFGESEANVRE+FDKAR A+PCVLFFDELD
Sbjct 521 GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELD 580
Query 184 SIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLD 243
SI RG ++GD GGA DRV+NQ+LTE+DG+ KN+F +GATNRP+++D A+LRPGRLD
Sbjct 581 SIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLD 640
Query 244 QLIYIP 249
QLIYIP
Sbjct 641 QLIYIP 646
Score = 152 bits (383), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 112/172 (65%), Gaps = 3/172 (1%)
Query 77 VKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAVAS 136
V +DDIGG + ++EM+ P+ HP F+ G+ P RG+L YGPPG GKTL+A+AVA+
Sbjct 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query 137 ECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSLGDA 196
E A F I GPE+++ GESE+N+R+ F++A +P ++F DELD+I +R + G+
Sbjct 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEV 320
Query 197 GGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIYI 248
R+++QLLT +DG+ ++ + ATNRP +D AL R GR D+ + I
Sbjct 321 ER---RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDI 369
> sce:YDL126C CDC48; ATPase in ER, nuclear membrane and cytosol
with homology to mammalian p97; in a complex with Npl4p and
Ufd1p participates in retrotranslocation of ubiquitinated
proteins from the ER into the cytosol for degradation by the
proteasome; K13525 transitional endoplasmic reticulum ATPase
Length=835
Score = 368 bits (945), Expect = 9e-102, Method: Compositional matrix adjust.
Identities = 166/246 (67%), Positives = 210/246 (85%), Gaps = 0/246 (0%)
Query 4 SSTHGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCN 63
+ THG+VGAD+A LC+EAA+ IREKMDLIDL++D IDA+VL+S+ VT ++F AL + N
Sbjct 411 AETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDEIDAEVLDSLGVTMDNFRFALGNSN 470
Query 64 PSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPP 123
PS+LRETVVE NV WDD+GGL+E+K L+E + YP+ HP+++ KFG+ PS+GVLFYGPP
Sbjct 471 PSALRETVVESVNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPP 530
Query 124 GCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELD 183
G GKTLLAKAVA+E SANFIS+KGPELL+MW+GESE+N+R++FDKARAA+P V+F DELD
Sbjct 531 GTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELD 590
Query 184 SIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLD 243
SI RG SLGDAGGA DRV+NQLLTE+DG+ KN+F +GATNRP+ +D A+LRPGRLD
Sbjct 591 SIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLD 650
Query 244 QLIYIP 249
QLIY+P
Sbjct 651 QLIYVP 656
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 113/172 (65%), Gaps = 3/172 (1%)
Query 77 VKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAVAS 136
V +DDIGG + ++EM+ P+ HP+ F+ G+ P RGVL YGPPG GKTL+A+AVA+
Sbjct 211 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVAN 270
Query 137 ECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSLGDA 196
E A F I GPE+++ GESE+N+R+ F++A +P ++F DE+DSI +R + G+
Sbjct 271 ETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTNGEV 330
Query 197 GGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIYI 248
RV++QLLT +DG+ N+ + ATNRP +D AL R GR D+ + I
Sbjct 331 ER---RVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDI 379
> cel:C06A1.1 cdc-48.1; Cell Division Cycle related family member
(cdc-48.1); K13525 transitional endoplasmic reticulum ATPase
Length=809
Score = 367 bits (941), Expect = 3e-101, Method: Compositional matrix adjust.
Identities = 180/244 (73%), Positives = 209/244 (85%), Gaps = 1/244 (0%)
Query 7 HGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCNPSS 66
HGFVGADLA LC+EAAL IREKM+LIDLEDD IDA+VLNS+AVT E+F A +PS+
Sbjct 410 HGFVGADLASLCSEAALQQIREKMELIDLEDDQIDAEVLNSLAVTMENFRFAQGKSSPSA 469
Query 67 LRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCG 126
LRE VVE PN W DIGGL+ VKR LQE++ YP++HPEK+ KFGM PSRGVLFYGPPGCG
Sbjct 470 LREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCG 529
Query 127 KTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSI- 185
KTLLAKA+A+EC ANFISIKGPELLTMWFGESEANVR+VFDKARAA+PCVLFFDELDSI
Sbjct 530 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIA 589
Query 186 GTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQL 245
+ G + GD GGA DRV+NQ+LTE+DG+ KN+F +GATNRP+++D A+LRPGRLDQL
Sbjct 590 KARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQL 649
Query 246 IYIP 249
IYIP
Sbjct 650 IYIP 653
Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 113/173 (65%), Gaps = 3/173 (1%)
Query 76 NVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAVA 135
++ +DD+GG+ + ++EM+ P+ HP+ F+ G+ P RG+L +GPPG GKTL+A+AVA
Sbjct 206 DIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVA 265
Query 136 SECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSLGD 195
+E + F I GPE+++ GESE+N+R+ F++ P +LF DE+D+I +R + G+
Sbjct 266 NETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNGE 325
Query 196 AGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIYI 248
R+++QLLT +DGV NL + ATNRP +D AL R GR D+ I I
Sbjct 326 VER---RIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDI 375
Score = 30.4 bits (67), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 12/69 (17%)
Query 4 SSTHGFVGADLAQLCTEAALSCIREKMDL-IDLEDDTIDAQVLNSM-----------AVT 51
+T GF GADL ++C A IRE ++ I +E + D Q +T
Sbjct 684 KNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQDRQARGEELMEDDAVDPVPEIT 743
Query 52 QEHFSSALQ 60
+ HF A++
Sbjct 744 RAHFEEAMK 752
> dre:563679 MGC136908; zgc:136908
Length=805
Score = 363 bits (933), Expect = 2e-100, Method: Compositional matrix adjust.
Identities = 180/246 (73%), Positives = 213/246 (86%), Gaps = 0/246 (0%)
Query 4 SSTHGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCN 63
+ THG VGADLA LC+EAAL IR+KM LIDLEDD+IDA +LNS+AVT + F AL N
Sbjct 403 AETHGHVGADLAALCSEAALQAIRKKMTLIDLEDDSIDADLLNSLAVTMDDFKWALSQSN 462
Query 64 PSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPP 123
PS+LRETVVEVP+V W+DIGGL+EVKR LQE++ YP+++P+KF KFGM PSRGVLFYGPP
Sbjct 463 PSALRETVVEVPHVNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPP 522
Query 124 GCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELD 183
GCGKTLLAKA+A+EC ANF+SIKGPELLTMWFGESEANVR+VFDKAR A+PC+LFFDELD
Sbjct 523 GCGKTLLAKAIANECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELD 582
Query 184 SIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLD 243
SI RG GDAGGA DRV+NQ+LTE+DG+ KN+F +GATNRP+++D A+LRPGRLD
Sbjct 583 SIAKARGGGAGDAGGAADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLD 642
Query 244 QLIYIP 249
QLIYIP
Sbjct 643 QLIYIP 648
Score = 151 bits (382), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 113/173 (65%), Gaps = 3/173 (1%)
Query 76 NVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAVA 135
++ +DDIGG + ++EM+ P+ HP F+ G+ P RG+L YGPPG GKTL+A+AVA
Sbjct 202 DIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVARAVA 261
Query 136 SECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSLGD 195
+E A F I GPE+++ GESE+N+R+ F++A +P ++F DELD+I +R + G+
Sbjct 262 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGE 321
Query 196 AGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIYI 248
R+++QLLT +DG+ ++ + ATNRP +D AL R GR D+ I I
Sbjct 322 VER---RIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREIDI 371
> tgo:TGME49_121640 cell division protein 48, putative ; K13525
transitional endoplasmic reticulum ATPase
Length=963
Score = 345 bits (885), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 159/244 (65%), Positives = 193/244 (79%), Gaps = 0/244 (0%)
Query 6 THGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCNPS 65
HGFVGAD+AQLC EAA+ C+RE +D + D +D + L V HF AL NPS
Sbjct 573 AHGFVGADMAQLCLEAAMQCVRENCQFVDFDKDEVDPETLAKFQVRMPHFVHALSVVNPS 632
Query 66 SLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGC 125
+LRE VEVP+V+W+DIGGL EVK L E + YP++H EKF KFG+ PS+GVLF+GPPGC
Sbjct 633 ALRERHVEVPDVRWEDIGGLTEVKEELVETVQYPVEHGEKFHKFGLAPSKGVLFFGPPGC 692
Query 126 GKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSI 185
GKTLLAKAVA+EC ANFIS+KGPELLTMWFGESEANVR++FDKARAA+PCV+FFDE+DSI
Sbjct 693 GKTLLAKAVANECKANFISVKGPELLTMWFGESEANVRDLFDKARAAAPCVIFFDEMDSI 752
Query 186 GTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQL 245
RG+ G G A DRV+NQ+LTEIDG+G K +F +GATNRP++LD A+ RPGRLDQL
Sbjct 753 AKARGSGTGGGGEAADRVINQILTEIDGIGKRKPIFVIGATNRPDILDPAVTRPGRLDQL 812
Query 246 IYIP 249
+YIP
Sbjct 813 LYIP 816
Score = 169 bits (427), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 120/173 (69%), Gaps = 3/173 (1%)
Query 77 VKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAVAS 136
+ +DD+GGL++ ++E++ P+ PE F++ G+ RGVL +G GCGKTLLAKA+A+
Sbjct 371 ITYDDVGGLKKELNLIRELVELPLRFPEIFKQVGVQTPRGVLLHGSSGCGKTLLAKAIAN 430
Query 137 ECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSLGDA 196
EC ANF+++ GPE+++ GESEAN+R +F++A A SPC+LF DE+DSI ++R + G+
Sbjct 431 ECGANFLTVNGPEVMSKLAGESEANLRRIFEEAAALSPCLLFIDEIDSIASKREKTQGE- 489
Query 197 GGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIYIP 249
R++ QLLT +DGV K + + ATNRP LD AL R GR D+ I IP
Sbjct 490 --VEKRIVAQLLTLMDGVSSDKGIVVLAATNRPNQLDPALRRFGRFDREIEIP 540
> bbo:BBOV_IV001700 21.m02769; cell division cycle protein ATPase;
K13525 transitional endoplasmic reticulum ATPase
Length=922
Score = 335 bits (860), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 159/248 (64%), Positives = 194/248 (78%), Gaps = 7/248 (2%)
Query 7 HGFVGADLAQLCTEAALSCIREK---MDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCN 63
HG+VGAD+AQLC EAA+ CIRE MD++ ED + +VLN + + HF+ AL+ CN
Sbjct 561 HGYVGADIAQLCFEAAMCCIRENLASMDMLQFED-KVSPEVLNKLVIQNRHFAEALRICN 619
Query 64 PSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPP 123
PS+LRE V++P W+DIGGLE+VK+ L E + YP++HPEKF KFG S+GVLFYGPP
Sbjct 620 PSTLRERRVQIPETTWEDIGGLEDVKKELIETVQYPVEHPEKFRKFGQASSKGVLFYGPP 679
Query 124 GCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELD 183
GCGKTLLAKA+A EC+ANFISIKGPELLTMWFGESEANVRE+FDKARAA+PC+LFFDE+D
Sbjct 680 GCGKTLLAKAIAHECNANFISIKGPELLTMWFGESEANVRELFDKARAAAPCILFFDEID 739
Query 184 SIGTQRGNSLGDAGG---AGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPG 240
SI RG G + A DRV+NQ+LTEIDGV K +F + ATNRP++LD A+ RPG
Sbjct 740 SIAKTRGGPGGGSSSGSEAADRVINQILTEIDGVNVKKPIFIIAATNRPDILDPAICRPG 799
Query 241 RLDQLIYI 248
RLDQLIYI
Sbjct 800 RLDQLIYI 807
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query 57 SALQSCNPSSLRETV-VEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSR 115
S L PS RE + +D+IGG+++ ++E+I P+ HPE ++ G+ P +
Sbjct 337 SVLDCSGPSLTREQHDASYGELGYDEIGGMDKQLSKIRELIELPLLHPEVYKAVGISPPK 396
Query 116 GVLFYGPPGCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPC 175
GV+ +GPPG GKTL+A+A+ASE A+ + I GPE+++ GESEA +R F+KA SP
Sbjct 397 GVILHGPPGTGKTLIARAIASETGAHCVVINGPEIMSKHVGESEAKLRRAFEKASKNSPA 456
Query 176 VLFFDELDSIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEA 235
++F DE+DSI T+R S + R+++QLLT +DG+ P KN+ + ATNR +D A
Sbjct 457 IIFIDEIDSIATKREKSPSE---LERRIVSQLLTLMDGIEPSKNVVVLAATNRINSIDTA 513
Query 236 LLRPGRLDQLIYI 248
L R GR D+ I I
Sbjct 514 LRRFGRFDREIEI 526
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 26/93 (27%)
Query 8 GFVGADLAQLCTEAALSCIREKMD--------LIDLEDDTIDAQVLNSMAVTQEHFSSAL 59
G+ GAD+A++C AA IRE ++ L + E+D + +T EHF A+
Sbjct 843 GYSGADIAEICHRAAREAIRESIEHEIKRGRRLKEGEEDPVP-------YITNEHFRVAM 895
Query 60 QSCNPSSLRETVVEVPNVKWDDIGGLEEVKRNL 92
+ S V+ +DI E+ K+ L
Sbjct 896 ANARKS-----------VRKEDIKRYEQFKKKL 917
> tpv:TP03_0490 cell division cycle protein 48; K13525 transitional
endoplasmic reticulum ATPase
Length=954
Score = 325 bits (834), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 151/247 (61%), Positives = 188/247 (76%), Gaps = 4/247 (1%)
Query 7 HGFVGADLAQLCTEAALSCIREKMDLIDLED----DTIDAQVLNSMAVTQEHFSSALQSC 62
HGFVGAD+AQLC EAA+SCI+E ++ + + I +L+ M V +HF AL C
Sbjct 597 HGFVGADIAQLCFEAAMSCIKENINSPAIHQYYYAEEIPQDILSRMLVRNKHFMEALSVC 656
Query 63 NPSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGP 122
NPS+LRE +VE+P W+DIGGLE VK L E I YP+ PEKF K+G ++GVLFYGP
Sbjct 657 NPSNLRERIVEIPETTWNDIGGLESVKNELIETIQYPLQFPEKFVKYGQSCNKGVLFYGP 716
Query 123 PGCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDEL 182
PGCGKTLLAKA+A EC+ANFISIKGPELLTMWFGESEANVRE+FDKARA++PC+LFFDE+
Sbjct 717 PGCGKTLLAKAIAHECNANFISIKGPELLTMWFGESEANVRELFDKARASAPCILFFDEI 776
Query 183 DSIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRL 242
DSI R ++ A DRV+NQ+LTEIDG+ K +F + ATNRP+++D A+LRPGRL
Sbjct 777 DSIAKTRSSNTSTGSEAADRVINQILTEIDGINVKKPIFIIAATNRPDIIDPAILRPGRL 836
Query 243 DQLIYIP 249
+LIYIP
Sbjct 837 GKLIYIP 843
Score = 129 bits (325), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 109/202 (53%), Gaps = 35/202 (17%)
Query 77 VKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAVAS 136
V +DDIGG+ + ++E+I P+ HPE F+ G+ P +GV+ +GPPG GKTL+A+A+A+
Sbjct 362 VGYDDIGGMNKQLSKIRELIELPLLHPELFKTVGINPPKGVILHGPPGSGKTLVARAIAN 421
Query 137 ECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSLGDA 196
E A I GPE+++ GESE +R+ F+ AR +P ++F DE+DSI +R + +
Sbjct 422 ETGAKCYVINGPEIMSKMVGESEEKLRKTFENARKNAPSIIFIDEIDSIAGKRDKT---S 478
Query 197 GGAGDRVMNQLLTEIDGVGPMKN--------------------------------LFFVG 224
G R+++QLLT +DG+ N L +
Sbjct 479 GELERRLVSQLLTLMDGINQSDNKVIYYLCIYGRYPSWVIRPTLHLLHNIKFPIGLIVLA 538
Query 225 ATNRPELLDEALLRPGRLDQLI 246
ATNR +D AL R GR D+ I
Sbjct 539 ATNRINSIDNALRRFGRFDREI 560
Score = 30.8 bits (68), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query 8 GFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMA-VTQEHFSSALQSCNPS 65
G+ GAD+A++C AA IRE ++ ++ + + +T +HF AL++ S
Sbjct 878 GYSGADIAEICHRAAREAIRESIEEEIKRKRPLEKGEKDPVPFITNKHFQVALRNSRKS 936
> pfa:PF07_0047 cell division cycle ATPase, putative
Length=1229
Score = 292 bits (748), Expect = 7e-79, Method: Composition-based stats.
Identities = 129/218 (59%), Positives = 169/218 (77%), Gaps = 2/218 (0%)
Query 31 DLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCNPSSLRETVVEVPNVKWDDIGGLEEVKR 90
D +D + I A +LN + + +HF AL CNPSSLRE V++P V W+DIGG+ EVK
Sbjct 885 DKLDKNERRIPAYILNKLTIKAKHFQHALNICNPSSLRERQVQIPTVTWNDIGGMNEVKE 944
Query 91 NLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAVASECSANFISIKGPEL 150
L+E ILYP+++ + KF ++G+L YGPPGCGKTLLAKA+A+EC ANFIS+KGPEL
Sbjct 945 QLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPEL 1004
Query 151 LTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSLGDAGGAGDRVMNQLLTE 210
LTMWFGESEANVR++FDKARAASPC++FFDE+DS+ +R ++ + A DRV+NQ+LTE
Sbjct 1005 LTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSNTNN--DASDRVINQILTE 1062
Query 211 IDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIYI 248
IDG+ K +F + ATNRP++LD+AL RPGRLD+LIYI
Sbjct 1063 IDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYI 1100
Score = 146 bits (368), Expect = 7e-35, Method: Composition-based stats.
Identities = 71/174 (40%), Positives = 111/174 (63%), Gaps = 3/174 (1%)
Query 76 NVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAVA 135
++ ++D+GG+++ ++E+I P+ +PE F G+ +GVL +G PG GKT +AKA+A
Sbjct 523 DITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIA 582
Query 136 SECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSLGD 195
+E +A I GPE+++ GESE +R++F KA +PC++F DE+DSI +R S +
Sbjct 583 NESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNE 642
Query 196 AGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIYIP 249
RV++QLLT +DG+ N+ + ATNRP +D AL R GR D+ I IP
Sbjct 643 ---LEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIP 693
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/36 (61%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Query 7 HGFVGADLAQLCTEAALSCIREKMDLIDL-EDDTID 41
HG+VGADLAQLC EAA+ CI+E + +DL E+D I+
Sbjct 727 HGYVGADLAQLCFEAAIQCIKEHIHFLDLDEEDFIE 762
> hsa:166378 SPATA5, AFG2, SPAF; spermatogenesis associated 5;
K14575 AAA family ATPase
Length=893
Score = 266 bits (679), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 120/246 (48%), Positives = 175/246 (71%), Gaps = 4/246 (1%)
Query 4 SSTHGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCN 63
+S HG+VGADL LC EA L +R ++ + + D +V + +T + F A+
Sbjct 554 NSAHGYVGADLKVLCNEAGLCALRR---ILKKQPNLPDVKVAGLVKITLKDFLQAMNDIR 610
Query 64 PSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPP 123
PS++RE ++VPNV W DIGGLE +K L++ + +P+ HPE F + G+ P +GVL YGPP
Sbjct 611 PSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPP 670
Query 124 GCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELD 183
GC KT++AKA+A+E NF++IKGPEL+ + GESE VRE F KARA +P ++FFDELD
Sbjct 671 GCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRKARAVAPSIIFFDELD 730
Query 184 SIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLD 243
++ +RG+SLG AG DRV+ QLLTE+DG+ +K++ + ATNRP+ +D+AL+RPGR+D
Sbjct 731 ALAVERGSSLG-AGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRID 789
Query 244 QLIYIP 249
++IY+P
Sbjct 790 RIIYVP 795
Score = 146 bits (369), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 120/201 (59%), Gaps = 9/201 (4%)
Query 54 HFSSALQSCNPSSLRETVVEVPN---VKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFG 110
+F S+ N + + + E N V +D IGGL + ++E+I P+ PE F+ +G
Sbjct 324 YFISSTTRVNFTEIDKNSKEQDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYG 383
Query 111 MIPSRGVLFYGPPGCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKAR 170
+ RGVL YGPPG GKT++A+AVA+E A I GPE+++ ++GE+EA +R++F +A
Sbjct 384 IPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEAT 443
Query 171 AASPCVLFFDELDSIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKN---LFFVGATN 227
P ++F DELD++ +R G RV+ LLT +DG+G + + +GATN
Sbjct 444 LRHPSIIFIDELDALCPKRE---GAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATN 500
Query 228 RPELLDEALLRPGRLDQLIYI 248
RP LD AL RPGR D+ I I
Sbjct 501 RPHALDAALRRPGRFDKEIEI 521
> mmu:57815 Spata5, 2510048F20Rik, C78064, Spaf; spermatogenesis
associated 5; K14575 AAA family ATPase
Length=893
Score = 264 bits (674), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 117/246 (47%), Positives = 174/246 (70%), Gaps = 4/246 (1%)
Query 4 SSTHGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCN 63
++ HG+VGADL LC EA L +R ++ + + D++V + +T F +
Sbjct 554 NNAHGYVGADLKALCNEAGLHALRR---VLRKQPNLPDSKVAGMVKITLNDFLQGMNDIR 610
Query 64 PSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPP 123
PS++RE ++VPNV W DIGGLE +K L++ + +P+ HP+ F + G+ P +GVL YGPP
Sbjct 611 PSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPP 670
Query 124 GCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELD 183
GC KT++AKA+A+E NF++IKGPEL+ + GESE VRE+F KARA +P ++FFDELD
Sbjct 671 GCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELD 730
Query 184 SIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLD 243
++ +RG+S G AG DRV+ QLLTE+DG+ +KN+ + ATNRP+ +D+AL+RPGR+D
Sbjct 731 ALAVERGSSSG-AGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRIDKALMRPGRID 789
Query 244 QLIYIP 249
++IY+P
Sbjct 790 RIIYVP 795
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 111/176 (63%), Gaps = 6/176 (3%)
Query 76 NVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAVA 135
V +D IGGL + ++E+I P+ PE F+ +G+ RG+L YGPPG GKT++A+AVA
Sbjct 349 KVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVA 408
Query 136 SECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSLGD 195
+E A I GPE+++ ++GE+EA +R++F +A P ++F DELD++ +R G
Sbjct 409 NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKRE---GA 465
Query 196 AGGAGDRVMNQLLTEIDGVGPMKN---LFFVGATNRPELLDEALLRPGRLDQLIYI 248
RV+ LLT +DG+G + + +GATNRP+ LD AL RPGR D+ I I
Sbjct 466 QSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEI 521
> bbo:BBOV_III010880 17.m07936; ATPase, AAA family protein
Length=893
Score = 250 bits (639), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 127/257 (49%), Positives = 173/257 (67%), Gaps = 17/257 (6%)
Query 8 GFVGADLAQLCTEAALSCIRE--------KMDLID-LEDDTIDAQVLNSMAVTQEHF--- 55
GFVGADL QL T AA + I + +D ID L++ +A + M + ++ F
Sbjct 471 GFVGADLKQLVTSAAWARIDKINQEMRGNSIDDIDILKNRDSNAPFVEKMDIPEDAFIDV 530
Query 56 ---SSALQSCNPSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMI 112
AL PS+LRE +EVPNVKWDDIGG E+ KR ++E + YPI + ++++K +
Sbjct 531 DDLKRALTITKPSALRELQIEVPNVKWDDIGGYEDAKRVIKECVEYPIVYADEYKKLQIQ 590
Query 113 PSRGVLFYGPPGCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAA 172
RGVL YGPPGC KTL+AKAVA+E NFIS+KGPE+ M+ GESE +R+VF AR
Sbjct 591 APRGVLLYGPPGCSKTLMAKAVATESHMNFISVKGPEIFNMYVGESERAIRKVFKTARTN 650
Query 173 SPCVLFFDELDSIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELL 232
+PCV+FFDE+DSI R ++ D+ G RV++QLL E+DG+ +K + +GATNRP+L+
Sbjct 651 APCVIFFDEMDSISVSREHA--DSTGVTRRVVSQLLNEMDGISELKQVIVIGATNRPDLM 708
Query 233 DEALLRPGRLDQLIYIP 249
D ALLRPGRLD+L+YIP
Sbjct 709 DSALLRPGRLDRLVYIP 725
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 125/269 (46%), Gaps = 43/269 (15%)
Query 8 GFVGADLAQLCTEAALSCIREKMDLI--DLEDDTIDAQVLNSMAVTQEHFSSALQSCNPS 65
F+ DL Q C+ + I ++I ++ V+N + + H S C+ S
Sbjct 171 AFIKGDLNQYCSNTLWNYILSMNNVIICNIRGVVTRLSVINYVLEDESHVSPL---CSIS 227
Query 66 SLRETVVEV-----------PNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPS 114
+T VE+ P+ + I GL V L + +++P+ ++++K G+ P
Sbjct 228 --LDTKVELRIQRSCDKQSDPSPRETKIAGLSTVLNKLMKYVVHPLVFKDEYKKLGIAPP 285
Query 115 RGVLFYGPPGCGKTLLAKAVAS----------ECSANFISIKGPELLTMWFGESEANVRE 164
RGVL YGPPGCGKT +AKA+ + + + + I+ +L +G + +N+
Sbjct 286 RGVLLYGPPGCGKTSIAKAMKNNMKQLSGFKDDHEVHVMLIQSSDLFNHEYGPTASNIAI 345
Query 165 VFDK-ARAAS--PCVLFFDELDSIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKN-- 219
+F++ A+ A PC+ F DE++ + +R G+ ++ L +DG N
Sbjct 346 IFEQCAKIAKRCPCICFIDEIEILCKKRS-----GYNTGNGILAAFLNYMDGFKLPSNSE 400
Query 220 -----LFFVGATNRPELLDEALLRPGRLD 243
+G TN + +D+AL RPGR D
Sbjct 401 ENDHGFVIIGCTNTIDSIDQALRRPGRFD 429
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 22/27 (81%), Gaps = 0/27 (0%)
Query 5 STHGFVGADLAQLCTEAALSCIREKMD 31
ST+G+ GA++A +C E+A++ +RE ++
Sbjct 760 STNGYSGAEIALICRESAMNALRETIN 786
> tgo:TGME49_035610 ATPase, AAA family domain-containing protein
Length=746
Score = 249 bits (635), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 127/264 (48%), Positives = 171/264 (64%), Gaps = 23/264 (8%)
Query 7 HGFVGADLAQLCTEAALSCIREKMDLI---DL-EDDTIDA---------QVLNSMA---- 49
FV ADL L T AA ++ + + D+ DDT D V ++A
Sbjct 343 QAFVPADLRLLVTTAATQALKAFLPIETSGDMPSDDTRDELQGGEEATESVPGALAFLSK 402
Query 50 ----VTQEHFSSALQSCNPSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEK 105
VT +HF AL+ PS+L+ +EVP VKWD+IGG VK++LQE + +P+ +
Sbjct 403 ENKPVTLKHFRRALRHVKPSALKSVAIEVPQVKWDEIGGYASVKKSLQECVEWPLKYAHL 462
Query 106 FEKFGMIPSRGVLFYGPPGCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREV 165
F + + P RG+L YGPPGC KT++AKAVA+E NFIS+KGPEL + W GESE VREV
Sbjct 463 FRQLKVSPPRGMLLYGPPGCSKTMMAKAVATESKMNFISVKGPELFSKWVGESERAVREV 522
Query 166 FDKARAASPCVLFFDELDSIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGA 225
F KAR +PCV+FFDE+D++G R GDAGG RV++QLL E+DG+GP++ + + A
Sbjct 523 FRKARQNAPCVIFFDEVDAMGGDR--ETGDAGGVDSRVLSQLLNEMDGIGPVREVIVIAA 580
Query 226 TNRPELLDEALLRPGRLDQLIYIP 249
TNRP+LLD ALLRPGRLD+L+Y+P
Sbjct 581 TNRPDLLDAALLRPGRLDRLVYVP 604
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 0/63 (0%)
Query 75 PNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAV 134
P + +GGL V L ++ P+ P+ F+ +G++P +GVL YGPPG GKT LA+A+
Sbjct 5 PRGGLNRVGGLHRVLPELMWSLILPLLRPDLFQAYGVLPPKGVLLYGPPGSGKTHLARAL 64
Query 135 ASE 137
A E
Sbjct 65 AEE 67
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query 176 VLFFDELDSIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEA 235
+LF DE+D++ +R +A G R + LL+ +DG+ +LF + ATN P LLD+A
Sbjct 239 LLFIDEIDAVCPKRE----EATEVGRRAVCALLSCLDGIATDGSLFVLAATNHPYLLDDA 294
Query 236 LLRPGRLDQLIYI 248
+ R GRL++ I +
Sbjct 295 IRRAGRLERDIEV 307
Score = 34.3 bits (77), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 22/30 (73%), Gaps = 0/30 (0%)
Query 1 SWLSSTHGFVGADLAQLCTEAALSCIREKM 30
S S+THG+ GA++ +C EA+++ +RE +
Sbjct 632 SLASATHGYSGAEIVMICREASMAAVREAV 661
> cpv:cgd4_1730 CDC48 like AAA ATpase
Length=891
Score = 241 bits (616), Expect = 1e-63, Method: Composition-based stats.
Identities = 114/248 (45%), Positives = 161/248 (64%), Gaps = 8/248 (3%)
Query 1 SWLSSTHGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQ 60
S + T FVGADL L E+ + + +++D ++ + ++++
Sbjct 493 SLVDETQAFVGADLKMLINESINRFLERTTNTEFVDNDQF-------TLLSFDDIHNSVK 545
Query 61 SCNPSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFY 120
+ PS+LRE +E+P W+DIGG EEVK L+E + +P+ H E FE + P GVL Y
Sbjct 546 NIKPSALRELAIEIPKTDWNDIGGYEEVKEQLKECVEWPLIHSELFEYMKIKPPSGVLLY 605
Query 121 GPPGCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFD 180
GPPGC KTL+AKAVA+E NFIS+KGPEL + W GESE ++RE+F KAR SPC++FFD
Sbjct 606 GPPGCSKTLMAKAVATESKMNFISVKGPELFSKWVGESEKSIREIFRKARQNSPCIIFFD 665
Query 181 ELDSIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPG 240
E+D+IG R S+ + RV++Q+L E+DG+ K + +GATNRP+LLD ALLRPG
Sbjct 666 EIDAIGVNR-ESMSNTSDVSTRVLSQMLNEMDGITTNKQVIVIGATNRPDLLDSALLRPG 724
Query 241 RLDQLIYI 248
RLD++IYI
Sbjct 725 RLDRIIYI 732
Score = 90.5 bits (223), Expect = 5e-18, Method: Composition-based stats.
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 20/188 (10%)
Query 80 DDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAVASEC- 138
D IGG+ +K + + I+ P+ + + FG+ PS+G+L YGPPG GKTL+A+++A E
Sbjct 277 DKIGGMNHLKHEINKCIINPLKFSKIYSSFGIKPSKGILLYGPPGTGKTLIARSIAEEIE 336
Query 139 -------------SANFISIKGPELLTMWFGESE---ANVREVFDKARAAS--PCVLFFD 180
S +FI I G + E ++++V D ++ +LF D
Sbjct 337 LITTFKQDSDLELSVDFIVIDGSNISNNTDDEDNHFFNSIQKVKDNSKKDEFIYTILFID 396
Query 181 ELDSIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPG 240
E+D I R +S + + +L+ +DG + + TN+P +D AL R G
Sbjct 397 EIDLICGSR-DSFSGINDQNKKYLTAILSLLDGFDENNRVTLIATTNKPNEIDPALRRAG 455
Query 241 RLDQLIYI 248
R+D+ I +
Sbjct 456 RIDREIAV 463
> cpv:cgd5_2010 nuclear VCP like protein with 2 AAA ATpase domains
; K14571 ribosome biogenesis ATPase
Length=695
Score = 236 bits (602), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 173/290 (59%), Gaps = 49/290 (16%)
Query 6 THGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQV--------------------- 44
T GFVGADL L EAAL + + L+++ +D+Q
Sbjct 288 TPGFVGADLKTLINEAALIRVNKLYKRFKLDNNAMDSQSTLSFDLQIPDNQAIPEIVETP 347
Query 45 -------------------------LNSMAVTQEHFSSALQSCNPSSLRETVVEVPNVKW 79
L+S V+ E AL++ PSS RE +P++ W
Sbjct 348 SEMTDGGQTNTTLLEKPIPNYSNFDLSSCLVSHEDILEALENVTPSSRREGFTTIPDISW 407
Query 80 DDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAVASECS 139
+++G L E++ +L+ I+ PI + +++FG+ GVL YGPPGCGKTLLAKA+A E
Sbjct 408 ENVGALNELRVDLELRIISPIKNSHIYDRFGLETPSGVLLYGPPGCGKTLLAKAIAKESG 467
Query 140 ANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSLGDAGGA 199
ANFISI+GPELL + GESE VR VF++ARA++PC++FFDELDS+ R + + GA
Sbjct 468 ANFISIRGPELLNKYVGESEKAVRTVFERARASAPCIVFFDELDSLCAARSS---EGNGA 524
Query 200 GDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIYIP 249
+RV+NQLLTE+DGVG + +F V ATNRP+++D A++RPGRLD++IY+P
Sbjct 525 TERVVNQLLTELDGVGERRKVFVVAATNRPDIIDPAMMRPGRLDRIIYVP 574
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 97/175 (55%), Gaps = 4/175 (2%)
Query 75 PNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAV 134
P + DI G+E + R+++E ++ P+ P+ + G+ GVL GPPG GK+ L+ +
Sbjct 85 PKLSLKDIAGIENIIRDIEEFVIRPLKLPDIYRAVGVNSPCGVLLQGPPGTGKSYLSMCI 144
Query 135 ASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSLG 194
A E F + GP ++ G SEA++R++FD A +PC++ DE+D + +R G
Sbjct 145 AGELGLPFFKLSGPNIINGVSGTSEASLRKLFDDAIEMAPCLIIIDEIDIVTPKRE---G 201
Query 195 DAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIYIP 249
R+++Q +D + K + VG T+RP+ +D + R GR+D+ I +P
Sbjct 202 SNREMERRLVSQFANCLDKISG-KFVVVVGTTSRPDSIDPIIRRNGRMDREISMP 255
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query 5 STHGFVGADLAQLCTEA---ALSCIREKMDLIDLEDDTIDAQVLN-SMAVTQEHFSSALQ 60
+T GF GADL+QL EA AL +R I +D ++++ N S VTQ+ S +
Sbjct 606 NTQGFSGADLSQLIREATLKALDKLRTNDSSIFSSNDDFESRISNISGIVTQDLLMSVIS 665
Query 61 SCNPSSLRETVVEVPNVKW 79
PS E + N+K
Sbjct 666 GMKPSVREEQINFFENLKL 684
> ath:AT1G03000 PEX6; PEX6 (PEROXIN 6); ATP binding / ATPase/
nucleoside-triphosphatase/ nucleotide binding; K13339 peroxin-6
Length=941
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/259 (49%), Positives = 174/259 (67%), Gaps = 20/259 (7%)
Query 6 THGFVGADLAQLCTEAA----LSCIREKMDLIDLEDDT--ID----AQVLNSMA--VTQE 53
T GF+ DL L +A +S E + L DD +D +Q+ NS +E
Sbjct 571 TSGFLPRDLQALVADAGANLYISQESETKKINSLSDDLHGVDIHQASQIDNSTEKLTAKE 630
Query 54 HFSSAL---QSCNPSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFG 110
F+ AL + N S+L +VPNVKWDD+GGLE+VK ++ + + P+ H + F G
Sbjct 631 DFTKALDRSKKRNASAL--GAPKVPNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSS-G 687
Query 111 MIPSRGVLFYGPPGCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKAR 170
+ GVL YGPPG GKTLLAKAVA+ECS NF+S+KGPEL+ M+ GESE NVR++F+KAR
Sbjct 688 LRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKAR 747
Query 171 AASPCVLFFDELDSIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVG-PMKNLFFVGATNRP 229
+A PCV+FFDELDS+ RG S GD+GG DRV++Q+L EIDG+ ++LF +GA+NRP
Sbjct 748 SARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRP 806
Query 230 ELLDEALLRPGRLDQLIYI 248
+L+D ALLRPGR D+L+Y+
Sbjct 807 DLIDPALLRPGRFDKLLYV 825
> cel:K04G2.3 cdc-48.3; Cell Division Cycle related family member
(cdc-48.3); K13525 transitional endoplasmic reticulum ATPase
Length=724
Score = 230 bits (587), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 106/243 (43%), Positives = 154/243 (63%), Gaps = 24/243 (9%)
Query 6 THGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCNPS 65
THGF G DL L A + R + E + A + P+
Sbjct 407 THGFTGGDLCSLLKAAKFARGRTHL----------------------ERVNDARKRIRPT 444
Query 66 SLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGC 125
+R+ ++EVPNV W+DIGG EE+K +Q+ +++P HPE FE+FG+ P G+L YGPPGC
Sbjct 445 GIRQFILEVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPGC 504
Query 126 GKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSI 185
KTL+A+A+ASE NF+++KGPEL + W G+SE +R++F +AR +P ++FFDE+D++
Sbjct 505 SKTLIARALASEAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTIVFFDEIDAV 564
Query 186 GTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQL 245
G+ RG+ + G DRV+ QLLTE+DG+ + + ATNRP+ LD ALLRPGRLD+
Sbjct 565 GSSRGSE--KSSGVSDRVLAQLLTELDGLEKSSRVILLAATNRPDQLDSALLRPGRLDRA 622
Query 246 IYI 248
IY+
Sbjct 623 IYV 625
Score = 37.7 bits (86), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 15/139 (10%)
Query 26 IREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCNPSSLRET--VVEVPNVKWDDIG 83
I KM + ++DD + S AV + +Q N S+ T V++ +IG
Sbjct 195 IESKMSAMGIDDDKKRNSKVVSTAVGYK-----IQILNASAEGSTSDVLQTLPTDLSNIG 249
Query 84 GLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAVASECSANFI 143
G K+ L++ ++ P+ E P VL +G PG GKTLL K VA S +
Sbjct 250 GCFTAKQVLEDYVISPVRQKES-------PC-SVLIWGLPGSGKTLLLKEVALVLSGSTT 301
Query 144 SIKGPELLTMWFGESEANV 162
I E L G + N+
Sbjct 302 YIGSCEELMELNGVTTGNI 320
> sce:YLR397C AFG2, DRG1; ATPase of the CDC48/PAS1/SEC18 (AAA)
family, forms a hexameric complex; is essential for pre-60S
maturation and release of several preribosome maturation factors;
may be involved in degradation of aberrant mRNAs; K14575
AAA family ATPase
Length=780
Score = 230 bits (587), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 113/245 (46%), Positives = 158/245 (64%), Gaps = 10/245 (4%)
Query 4 SSTHGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCN 63
S THG+VGADL LC E+ + I+ + D ID S+ VT + SA+
Sbjct 447 SKTHGYVGADLTALCRESVMKTIQRGLG----TDANIDK---FSLKVTLKDVESAMVDIR 499
Query 64 PSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPP 123
PS++RE +E+P V W DIGG EE+K ++EMI P++ E F + G+ +GVL YGPP
Sbjct 500 PSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPP 559
Query 124 GCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELD 183
GC KTL AKA+A+E NF+++KGPE+ + GESE +RE+F KAR+A+P ++FFDE+D
Sbjct 560 GCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEID 619
Query 184 SIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLD 243
++ R G + A + V+ LL EIDGV +K + V ATNRP+ +D ALLRPGRLD
Sbjct 620 ALSPDRD---GSSTSAANHVLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLD 676
Query 244 QLIYI 248
+ IY+
Sbjct 677 RHIYV 681
Score = 151 bits (381), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 117/198 (59%), Gaps = 8/198 (4%)
Query 51 TQEHFSSALQSCNPSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFG 110
T FS Q+ +L E + + +GGL++ +L+ I P+ P F FG
Sbjct 222 THITFSKETQANRKYNLPEPL------SYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFG 275
Query 111 MIPSRGVLFYGPPGCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKAR 170
+ P RG+L +GPPG GKT+L + VA+ +A+ ++I GP +++ + GE+EA +R++F++AR
Sbjct 276 VSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEAR 335
Query 171 AASPCVLFFDELDSIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPE 230
P ++F DE+DSI R N D+G RV+ LLT +DG+G + + ATNRP
Sbjct 336 KYQPSIIFIDEIDSIAPNRAND--DSGEVESRVVATLLTLMDGMGAAGKVVVIAATNRPN 393
Query 231 LLDEALLRPGRLDQLIYI 248
+D AL RPGR DQ + I
Sbjct 394 SVDPALRRPGRFDQEVEI 411
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 0/31 (0%)
Query 6 THGFVGADLAQLCTEAALSCIREKMDLIDLE 36
T G+ GA++ LC EA L+ I E +D+ +E
Sbjct 716 TEGYSGAEVVLLCQEAGLAAIMEDLDVAKVE 746
> sce:YNL329C PEX6, PAS8; AAA-peroxin that heterodimerizes with
AAA-peroxin Pex1p and participates in the recycling of peroxisomal
signal receptor Pex5p from the peroxisomal membrane
to the cystosol; K13339 peroxin-6
Length=1030
Score = 227 bits (579), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 147/204 (72%), Gaps = 4/204 (1%)
Query 47 SMAVTQEHFSSAL-QSCNPSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEK 105
S+ +TQE S A ++ N S+ ++PNV WDDIGG++ VK + + I P+ HPE
Sbjct 698 SILITQEDLSKATSKARNEFSVSIGAPQIPNVTWDDIGGIDFVKGEILDTIDMPLKHPEL 757
Query 106 FEKFGMIPSRGVLFYGPPGCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREV 165
F GM G+LFYGPPG GKTL+AKA+A+ S NF S+KGPELL M+ GESEANVR V
Sbjct 758 FTS-GMKKRSGILFYGPPGTGKTLMAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRV 816
Query 166 FDKARAASPCVLFFDELDSIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGP-MKNLFFVG 224
F KAR A PCV+FFDE+DS+ +RGN GD+GG DR+++QLL E+DG+ +F +G
Sbjct 817 FQKAREAKPCVIFFDEIDSVAPKRGNQ-GDSGGVMDRIVSQLLAELDGMSTDADGVFVIG 875
Query 225 ATNRPELLDEALLRPGRLDQLIYI 248
ATNRP+LLDEALLRPGR D+L+Y+
Sbjct 876 ATNRPDLLDEALLRPGRFDKLLYL 899
> xla:379269 nvl, MGC52979; nuclear VCP-like; K14571 ribosome
biogenesis ATPase
Length=854
Score = 225 bits (574), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 121/286 (42%), Positives = 164/286 (57%), Gaps = 46/286 (16%)
Query 6 THGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQV--------------------- 44
T G+VGADL LC EAA+ + + I + T +A V
Sbjct 462 TPGYVGADLMALCREAAMCAVNRVLIQIKDQQATTEAAVEETDPQPGAVALQAEKQTTAP 521
Query 45 ----------------------LNSMAVTQEHFSSALQSCNPSSLRETVVEVPNVKWDDI 82
L S+ + + F AL PS+ RE VP+V W DI
Sbjct 522 AQNELHRLLALLQEQTPLPEAELLSLCIEMDDFLGALPMVQPSAKREGFATVPDVTWADI 581
Query 83 GGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAVASECSANF 142
G LEE++ L IL P+ +PE+F+ G++ GVL GPPGCGKTLLAKAVA+E NF
Sbjct 582 GALEEIREELTMAILAPVRNPEQFKALGLMAPAGVLLAGPPGCGKTLLAKAVANESGLNF 641
Query 143 ISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSLGDAGGAGDR 202
IS+KGPELL M+ GESE VR+VF +A +SPCV+FFDE+D++ +R G GA R
Sbjct 642 ISVKGPELLNMYVGESERAVRQVFQRATNSSPCVIFFDEIDALCPRRS---GHDSGASVR 698
Query 203 VMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIYI 248
V+NQLLTE+DG+ + +F + ATNRP+++D A+LRPGRLD+ +Y+
Sbjct 699 VVNQLLTEMDGLESRRQVFIMAATNRPDIIDPAILRPGRLDKTLYV 744
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 116/178 (65%), Gaps = 7/178 (3%)
Query 72 VEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLA 131
V+ +++++DIGG E+ + + +M+++ + HPE ++ G++P RG L +GPPGCGKTLLA
Sbjct 253 VQHSSLRFEDIGGNEDTLKEVCKMMIH-MRHPEVYQHLGVVPPRGFLLHGPPGCGKTLLA 311
Query 132 KAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGN 191
+A+A E + + E+++ GESE +RE+FD+A +++PC+LF DE+DSI +R
Sbjct 312 QAIAGELDMPILKVAATEMVSGVSGESEQKLRELFDQAVSSAPCILFIDEIDSITPKREV 371
Query 192 SLGDAGGAGDRVMNQLLTEIDGVGPM---KNLFFVGATNRPELLDEALLRPGRLDQLI 246
+ D R++ QLLT +D + + + +GATNRP+ LD AL R GR D+ I
Sbjct 372 ASKD---MERRIVAQLLTCMDDLNSLAVTTQVLVIGATNRPDSLDPALRRAGRFDREI 426
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query 9 FVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCNPS 65
F GADL+ L EA++S +R++M + E T Q+ V+Q +F A PS
Sbjct 786 FTGADLSALVREASISALRQEM--LVQEPHTNPGQI----KVSQRNFEEAFNKVKPS 836
> dre:406805 nvl, wu:fa20g10, zgc:55732; nuclear VCP-like; K14571
ribosome biogenesis ATPase
Length=796
Score = 225 bits (573), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 114/261 (43%), Positives = 161/261 (61%), Gaps = 21/261 (8%)
Query 6 THGFVGADLAQLCTEAALSCIREKMDLIDLEDD------------------TIDAQVLNS 47
T G+VGADL LC EAA++ + + ED ++ L +
Sbjct 428 TPGYVGADLMALCREAAMNAVNRILLEPTTEDQITPTLALARLLDLLKSSVSLSEDQLAA 487
Query 48 MAVTQEHFSSALQSCNPSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFE 107
+ V FSS+L PS+ RE VP+V W D+G L++V+ L I+ PI +PE+F+
Sbjct 488 LCVLMSDFSSSLVRVQPSAKREGFATVPDVTWADVGALQDVREELHMAIMAPIQNPEQFK 547
Query 108 KFGMIPSRGVLFYGPPGCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFD 167
G+ G+L GPPGCGKTLLAKAVA+ NFIS+KGPELL M+ GESE VR+VF
Sbjct 548 ALGLSAPAGLLLAGPPGCGKTLLAKAVANASGLNFISVKGPELLNMYVGESERAVRQVFQ 607
Query 168 KARAASPCVLFFDELDSIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATN 227
+ R ++PCV+FFDE+D++ +R GA RV+NQLLTE+DG+ + +F + ATN
Sbjct 608 RGRNSAPCVIFFDEIDALCPRRSEH---ESGASVRVVNQLLTEMDGMENRRQVFIMAATN 664
Query 228 RPELLDEALLRPGRLDQLIYI 248
RP+++D A+LRPGRLD+ +Y+
Sbjct 665 RPDIIDPAVLRPGRLDKTLYV 685
Score = 150 bits (378), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 145/251 (57%), Gaps = 10/251 (3%)
Query 2 WLSSTHGFVGAD--LAQLCTEAALSCIREK-MDLIDLEDDTIDAQVLNSMAVTQEHFSSA 58
W+ G G + L LC E + S ++ ++ E ++ + + ++ +SA
Sbjct 146 WIIDKTGDRGQESILIDLCEEESSSTTNQRDSSRLEKEKKSVKQKRQKKNKLEEDSETSA 205
Query 59 LQSCNPSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVL 118
S ++ ++ +VK++D GG +E + +++++ + HPE +++ G++P RG L
Sbjct 206 GVPAKKSKVKGFELQFSSVKFEDFGGSDETLEEVCKLLIH-MRHPEVYQRLGVVPPRGFL 264
Query 119 FYGPPGCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLF 178
+GPPGCGKTLLA+AVA E + + I PEL++ GESE +RE+F++A +++PC+LF
Sbjct 265 LHGPPGCGKTLLAQAVAGETALPLLKISAPELVSGVSGESEQKLRELFEQAISSAPCILF 324
Query 179 FDELDSIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPM---KNLFFVGATNRPELLDEA 235
DE+D+I +R + D R++ QLLT +D + M + +GATNRP+ LD A
Sbjct 325 IDEIDAITPKRETASKD---MERRIVAQLLTCMDDLNSMLEPAQVLVIGATNRPDSLDPA 381
Query 236 LLRPGRLDQLI 246
L R GR D+ I
Sbjct 382 LRRAGRFDREI 392
> hsa:4931 NVL; nuclear VCP-like; K14571 ribosome biogenesis ATPase
Length=856
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/284 (42%), Positives = 167/284 (58%), Gaps = 44/284 (15%)
Query 6 THGFVGADLAQLCTEAALSCI-REKMDLIDLEDDTIDAQVLNSMAVTQEH---------- 54
T GFVGADL LC EAA+ + R M L + + + + L S V +E
Sbjct 466 TPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMEDLPSKGVQEERLGTEPTSETQ 525
Query 55 ------------------------------FSSALQSCNPSSLRETVVEVPNVKWDDIGG 84
F AL S PS+ RE V VPNV W DIG
Sbjct 526 DELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGA 585
Query 85 LEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAVASECSANFIS 144
LE+++ L IL P+ +P++F+ G++ GVL GPPGCGKTLLAKAVA+E NFIS
Sbjct 586 LEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFIS 645
Query 145 IKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSLGDAGGAGDRVM 204
+KGPELL M+ GESE VR+VF +A+ ++PCV+FFDE+D++ +R + GA RV+
Sbjct 646 VKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDR---ETGASVRVV 702
Query 205 NQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIYI 248
NQLLTE+DG+ + +F + ATNRP+++D A+LRPGRLD+ +++
Sbjct 703 NQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFV 746
Score = 142 bits (359), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 114/177 (64%), Gaps = 7/177 (3%)
Query 73 EVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAK 132
++ NVK++D+GG + + + +M+++ + HPE + G++P RGVL +GPPGCGKTLLA
Sbjct 258 QISNVKFEDVGGNDMTLKEVCKMLIH-MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAH 316
Query 133 AVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNS 192
A+A E + + PE+++ GESE +RE+F++A + +PC++F DE+D+I +R +
Sbjct 317 AIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVA 376
Query 193 LGDAGGAGDRVMNQLLT---EIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLI 246
D R++ QLLT +++ V + +GATNRP+ LD AL R GR D+ I
Sbjct 377 SKD---MERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREI 430
> cel:Y48C3A.7 mac-1; Member of AAA family binding CED-4 family
member (mac-1); K14571 ribosome biogenesis ATPase
Length=813
Score = 222 bits (565), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 122/271 (45%), Positives = 170/271 (62%), Gaps = 31/271 (11%)
Query 6 THGFVGADLAQLCTEAA----------------------LSCIREKMDLI----DLEDDT 39
T G+VGADL L EAA + I+E++D + +DD
Sbjct 432 TPGYVGADLQALIREAAKVAIDRVFDTIVVKNEGHKNLTVEQIKEELDRVLAWLQGDDDP 491
Query 40 IDAQVLNS-MAVTQEHFSSALQSCNPSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILY 98
LN + ++ E F AL + P++ RE VP+V WDDIG L EV++ L+ ILY
Sbjct 492 SALSELNGGLQISFEDFERALSTIQPAAKREGFATVPDVSWDDIGALVEVRKQLEWSILY 551
Query 99 PIDHPEKFEKFGM-IPSRGVLFYGPPGCGKTLLAKAVASECSANFISIKGPELLTMWFGE 157
PI + F G+ +G+L GPPGCGKTLLAKAVA+E NFIS+KGPELL M+ GE
Sbjct 552 PIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMYVGE 611
Query 158 SEANVREVFDKARAASPCVLFFDELDSIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPM 217
SE VR VF +AR + PCV+FFDE+D++ +R S G++ G G R++NQLLTE+DGV
Sbjct 612 SERAVRTVFQRARDSQPCVIFFDEIDALVPKR--SHGESSG-GARLVNQLLTEMDGVEGR 668
Query 218 KNLFFVGATNRPELLDEALLRPGRLDQLIYI 248
+ +F +GATNRP+++D A+LRPGRLD+++++
Sbjct 669 QKVFLIGATNRPDIVDAAILRPGRLDKILFV 699
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 33/202 (16%)
Query 76 NVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAVA 135
+VK++ IGG + + + ++ + P+ F G+ P RG + +GPPGCGKT+ A+AVA
Sbjct 202 HVKFEHIGGADRQFLEVCRLAMH-LKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVA 260
Query 136 SECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSLGD 195
E + + + EL++ GE+E +R +FD A+ SPC+L D++D+I +R + +
Sbjct 261 GELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRRETAQRE 320
Query 196 AGGAGDRVMNQLLTEIDGV------GPMKN-----------------------LFFVGAT 226
RV++QL + +D + P+K+ + +G T
Sbjct 321 ---MERRVVSQLCSSLDELVLPPREKPLKDQLTFGDDGSVAIIGDSPTAAGAGVLVIGTT 377
Query 227 NRPELLDEALLRPGRLDQLIYI 248
+RP+ +D L R GR + I +
Sbjct 378 SRPDAVDGGLRRAGRFENEISL 399
> bbo:BBOV_IV011460 23.m06332; ATPase AAA type domain containing
protein; K14571 ribosome biogenesis ATPase
Length=707
Score = 221 bits (563), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/246 (45%), Positives = 156/246 (63%), Gaps = 8/246 (3%)
Query 6 THGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQ--VLNSMAVTQEHFSSALQSCN 63
T GFVGADL + EAA I L D I Q V ++Q F S +
Sbjct 352 TPGFVGADLQAVTREAAACAISR---LFANHGDMITNQSFVHAEACISQSDFISGVSRVQ 408
Query 64 PSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPP 123
PS+ RE +PNV WD++G L +++ ++E I++PI + FG+ G+L YGPP
Sbjct 409 PSAKREGFATIPNVTWDNVGALSNLRKEMEEHIVFPILFKRLYSTFGLTVPAGILLYGPP 468
Query 124 GCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELD 183
GCGKTLLAKAVA+ ANFIS+KGPELL + GESE VR VF +A ++PCV+FFDE+D
Sbjct 469 GCGKTLLAKAVANGSKANFISVKGPELLNKYVGESERAVRLVFQRAAVSAPCVVFFDEID 528
Query 184 SIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLD 243
S+ R N +A +RV+NQLLTE+DG+ +++ + ATNRP+++D A+LRPGRL+
Sbjct 529 SLCPVRNN---EANHTTERVVNQLLTEMDGIHNRADVYVLAATNRPDIIDPAMLRPGRLE 585
Query 244 QLIYIP 249
+ +Y+P
Sbjct 586 RQMYVP 591
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 106/169 (62%), Gaps = 4/169 (2%)
Query 78 KWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAVASE 137
+ DD+GG+E ++ ++ ++++ P+ P+ ++ + P++G+L +GPPG GK+ LA+A+A E
Sbjct 152 RLDDVGGIEAIRGDIIDLVVRPLKFPDIYKYLCVQPTKGILLHGPPGSGKSRLAEAIAGE 211
Query 138 CSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSLGDAG 197
+ F + EL+T GESE+ +R +FD+A+ +P ++F DE+D++ R NS +
Sbjct 212 ANCAFFRVAATELVTGMSGESESRLRGLFDEAKRCAPSIIFLDEIDAVTPHRENS---SR 268
Query 198 GAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLI 246
G R++ QL +D + + +GATNRPE LD + R GR D+ I
Sbjct 269 GFEKRIVAQLGICMDSLAD-HFVIVIGATNRPECLDSMIRRNGRFDREI 316
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query 6 THGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMA-----VTQEHFSSALQ 60
T G+ GADLA L EA +S + EK+ + +++ +D V + A ++ E +SAL
Sbjct 624 TEGYSGADLACLVREAGISAV-EKLRIQYIKEHGLDTYVRSVDAPPGACISAEDLASALL 682
Query 61 SCNPSSLRETV 71
+PS ++ +
Sbjct 683 KVSPSVTQKQI 693
> tpv:TP01_1158 AAA family ATPase; K14571 ribosome biogenesis
ATPase
Length=727
Score = 219 bits (559), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 104/255 (40%), Positives = 165/255 (64%), Gaps = 16/255 (6%)
Query 6 THGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCNPS 65
T GFVGADL + E+A+ I + + ++ ++ ++ + +E F + PS
Sbjct 370 TPGFVGADLQAVLRESAIHSISRLFKSYSIANTDMN-DLMKNLYINREDFLIGINKVQPS 428
Query 66 SLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGC 125
S RE + +P+V W IG L +K L++ I++PI + + +++FG+ S G+L YGPPGC
Sbjct 429 SKREGFITIPDVTWSKIGALSFLKSELEKQIVFPIKYKKLYQRFGIGISAGILLYGPPGC 488
Query 126 GKTLLAKAVASECSANFISIKG-----------PELLTMWFGESEANVREVFDKARAASP 174
GKTLLAKA+++EC+ANFISIKG PE+L + GESE +R +F +A +SP
Sbjct 489 GKTLLAKAISNECNANFISIKGKLTHKLHILPRPEILNKYVGESEKAIRLIFQRAATSSP 548
Query 175 CVLFFDELDSIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDE 234
C++FFDE+DS+ + R D+ +R++NQLLTE+DG+ + ++ + ATNRP+++D
Sbjct 549 CIIFFDEVDSLCSIR----NDSNQVYERIVNQLLTEMDGIQNREYVYIIAATNRPDIIDP 604
Query 235 ALLRPGRLDQLIYIP 249
A+LRPGRL++L Y+P
Sbjct 605 AILRPGRLEKLFYVP 619
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 109/171 (63%), Gaps = 8/171 (4%)
Query 78 KWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAVASE 137
K D+GG++++K ++++++ P+ +P+ ++ G+ P++GVL +GPPG GKT LA+A+A E
Sbjct 170 KLKDVGGIDKIKGEIEDLVINPLKYPQLYKHLGVQPTKGVLLHGPPGSGKTKLAEAIAGE 229
Query 138 CSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSLGDAG 197
F + E++T GESE +R +F++A+A +P ++F DELDSI +R N+ +
Sbjct 230 IGCPFFRVAATEIVTGMSGESENRLRSLFEQAKACAPSIIFLDELDSITPKRENTFREME 289
Query 198 GAGDRVMNQLLTEIDGVGPMKNLF--FVGATNRPELLDEALLRPGRLDQLI 246
R+++QL +D ++N F +GATNR E +D + R GR D+ I
Sbjct 290 K---RIVSQLGICMDS---LQNHFVIVIGATNRQEYVDSMIRRNGRFDREI 334
Score = 32.0 bits (71), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query 11 GADLAQLCTEAALSCIRE-KMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCNPSSLRE 69
GADLA LC EA++ I E +M + + + + EHF AL PS ++
Sbjct 655 GADLASLCREASIIAIDEIRMSMSESSVSDYKLSAPENSVLKMEHFQKALLKVKPSVKQQ 714
Query 70 TV 71
+
Sbjct 715 QI 716
> sce:YLL034C RIX7; Putative ATPase of the AAA family, required
for export of pre-ribosomal large subunits from the nucleus;
distributed between the nucleolus, nucleoplasm, and nuclear
periphery depending on growth conditions; K14571 ribosome
biogenesis ATPase
Length=837
Score = 219 bits (558), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 147/209 (70%), Gaps = 3/209 (1%)
Query 40 IDAQVLNSMAVTQEHFSSALQSCNPSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYP 99
+ + L+ +++ E F AL + P++ RE VP+V W ++G L+ V+ L I+ P
Sbjct 493 LSGEQLSLLSIKYEDFLKALPTIQPTAKREGFATVPDVTWANVGALQRVRLELNMAIVQP 552
Query 100 IDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAVASECSANFISIKGPELLTMWFGESE 159
I PE +EK G+ GVL +GPPGCGKTLLAKAVA+E ANFISIKGPELL + GESE
Sbjct 553 IKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESE 612
Query 160 ANVREVFDKARAASPCVLFFDELDSIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKN 219
++R+VF +ARA+ PCV+FFDELD++ +R SL ++ RV+N LLTE+DG+ +
Sbjct 613 RSIRQVFTRARASVPCVIFFDELDALVPRRDTSLSESSS---RVVNTLLTELDGLNDRRG 669
Query 220 LFFVGATNRPELLDEALLRPGRLDQLIYI 248
+F +GATNRP+++D A+LRPGRLD+ ++I
Sbjct 670 IFVIGATNRPDMIDPAMLRPGRLDKSLFI 698
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 111/179 (62%), Gaps = 12/179 (6%)
Query 75 PNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAV 134
PN +GG+++V L E+I PI HPE F G+ P RGVL +GPPGCGKT +A A+
Sbjct 200 PNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANAL 259
Query 135 ASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSLG 194
A E FISI P +++ GESE +R++FD+AR+ +PC++FFDE+D+I +R
Sbjct 260 AGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKR----- 314
Query 195 DAGGAGD---RVMNQLLTEIDGVGPMKN----LFFVGATNRPELLDEALLRPGRLDQLI 246
D G + R++ QLLT +D + K + +GATNRP+ LD AL R GR D+ I
Sbjct 315 DGGAQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREI 373
> tpv:TP02_0059 hypothetical protein
Length=877
Score = 217 bits (553), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 109/259 (42%), Positives = 158/259 (61%), Gaps = 29/259 (11%)
Query 7 HGFVGADLAQLCTEAALSC----------------IREKMDLIDLEDDTIDAQVLNSMAV 50
FVGADL L T + + C I + +D ++ D+T++ ++
Sbjct 526 QAFVGADLKLLLTNS-MHCKINRLNNSNETSYGMNISDTVDTPEIADNTLNK------SL 578
Query 51 TQEHFSSALQSCNPSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFG 110
T E + L+ PS++RE VEVP V+WDDIGG E++K +++ + YP ++K
Sbjct 579 TYEDMMNGLKITRPSAMRELYVEVPEVRWDDIGGYEDLKTVIKQCVEYPRKFSALYQKLQ 638
Query 111 MIPSRGVLFYGPPGCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKAR 170
+ +G+L YGPPGC KTL+AKA+ +E NFIS+KGPE+ + GESE +R +F KAR
Sbjct 639 IQVPKGILLYGPPGCSKTLMAKAICTESHMNFISVKGPEMFDKYVGESERRLRRLFSKAR 698
Query 171 AASPCVLFFDELDSIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPE 230
SPCV+FFDE+DSI + D+ G RV++ LL E+DGV +K + VGATNRP+
Sbjct 699 LNSPCVIFFDEIDSICCE------DSSSVGKRVLSTLLNELDGVSALKQVLVVGATNRPQ 752
Query 231 LLDEALLRPGRLDQLIYIP 249
L+ +LLRPGR D+LIY+P
Sbjct 753 DLNRSLLRPGRFDRLIYVP 771
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 89/196 (45%), Gaps = 41/196 (20%)
Query 82 IGGLEEVKRNLQEMILYP------IDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAVA 135
I G++E+ ++ P + HP GVL YGPPGCGKTLLA+ +A
Sbjct 309 ISGMDEIIELFNTHVIIPLVLDLDVGHPS-----------GVLLYGPPGCGKTLLARKIA 357
Query 136 SE-----------------CSANFIS-IKGPELLTMWFGESEANVREVFDKAR---AASP 174
+ CS + ++ +L++ + G++E N+ E+F R S
Sbjct 358 TNYTKLFNLSNYKDNSSQSCSELKVKLVQSTDLISEFMGKTERNITELFQSLREESKTSK 417
Query 175 CVLFFDELDSIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGP-MKNLFFVGATNRPELLD 233
+ F DE+D + R +S D RV+ L +DGV N VG TN E +D
Sbjct 418 VICFIDEIDVLCVNRESSGSDLQAR--RVLTTFLNNMDGVNAGSSNFVIVGMTNYLENID 475
Query 234 EALLRPGRLDQLIYIP 249
A+ RPGR D I +P
Sbjct 476 NAMRRPGRFDLEIEVP 491
> ath:AT3G56690 CIP111; CIP111 (CAM INTERACTING PROTEIN 111);
ATPase/ calmodulin binding
Length=1022
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 138/203 (67%), Gaps = 1/203 (0%)
Query 46 NSMAVTQEHFSSALQSCNPSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEK 105
++++V E F +A PS++RE ++EVP V W+D+GG EVK L E + +P H +
Sbjct 690 HTLSVGFEDFENAKTKIRPSAMREVILEVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDA 749
Query 106 FEKFGMIPSRGVLFYGPPGCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREV 165
F++ G P G+L +GPPGC KTL+A+AVASE NF+++KGPEL + W GESE VR +
Sbjct 750 FKRIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSL 809
Query 166 FDKARAASPCVLFFDELDSIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGA 225
F KARA +P ++FFDE+DS+ + RG D DRVM+QLL E+DG+ + + A
Sbjct 810 FAKARANAPSIIFFDEIDSLASIRGKE-NDGVSVSDRVMSQLLVELDGLHQRVGVTVIAA 868
Query 226 TNRPELLDEALLRPGRLDQLIYI 248
TNRP+ +D ALLRPGR D+L+Y+
Sbjct 869 TNRPDKIDSALLRPGRFDRLLYV 891
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 85/142 (59%), Gaps = 7/142 (4%)
Query 109 FGMIPSRGVLFYGPPGCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDK 168
G+ P++GVL +GPPG GKT LA+ A NF S+ GPE+++ + GESE + EVF
Sbjct 413 LGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRS 472
Query 169 ARAASPCVLFFDELDSIGTQRGNSLGDAGGA--GDRVMNQLLTEIDGVGPMKNLFFVGAT 226
A A+P V+F D+LD+I R GG R++ LL +DG+ + + AT
Sbjct 473 ASNATPAVVFIDDLDAIAPARKE-----GGEELSQRMVATLLNLMDGISRTDGVVVIAAT 527
Query 227 NRPELLDEALLRPGRLDQLIYI 248
NRP+ ++ AL RPGRLD+ I I
Sbjct 528 NRPDSIEPALRRPGRLDREIEI 549
Score = 31.6 bits (70), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 26/41 (63%), Gaps = 0/41 (0%)
Query 4 SSTHGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQV 44
S T G+ GAD++ +C EAA++ + E +++ ++ + A +
Sbjct 923 SITKGYTGADISLICREAAIAALEESLEMEEISMRHLKAAI 963
> mmu:67459 Nvl, 1200009I24Rik; nuclear VCP-like; K14571 ribosome
biogenesis ATPase
Length=855
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 163/284 (57%), Gaps = 44/284 (15%)
Query 6 THGFVGADLAQLCTEAALSCIR-------------------------------------- 27
T GFVGADL LC EAA+ +
Sbjct 465 TPGFVGADLMALCREAAMCAVNRVLMKQQAQQKKKPEIEGLPSEGDQEERLGAEPTSETQ 524
Query 28 -EKMDLIDL--EDDTIDAQVLNSMAVTQEHFSSALQSCNPSSLRETVVEVPNVKWDDIGG 84
E L+ L + D + + + + + F AL PS+ RE V VPNV W DIG
Sbjct 525 DELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALAEVQPSAKREGFVTVPNVTWADIGA 584
Query 85 LEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKAVASECSANFIS 144
LE+++ L IL P+ +P++F G+ G+L GPPGCGKTLLAKAVA+E NFIS
Sbjct 585 LEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFIS 644
Query 145 IKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSLGDAGGAGDRVM 204
+KGPELL M+ GESE VR+VF +A+ ++PCV+FFDE+D++ +R + GA RV+
Sbjct 645 VKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDR---ETGASVRVV 701
Query 205 NQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIYI 248
NQLLTE+DG+ + +F + ATNRP+++D A+LRPGRLD+ +++
Sbjct 702 NQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFV 745
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 118/182 (64%), Gaps = 7/182 (3%)
Query 68 RETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGK 127
R T +++ NVK++D+GG + + + +M+++ + HPE ++ G++P RGVL +GPPGCGK
Sbjct 252 RSTELQISNVKFEDVGGNDATLKEVCKMLIH-MRHPEVYQHLGVVPPRGVLLHGPPGCGK 310
Query 128 TLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGT 187
TLLA A+A E + + PE+++ GESE +RE+FD+A + +PC++F DE+D+I
Sbjct 311 TLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITP 370
Query 188 QRGNSLGDAGGAGDRVMNQLLT---EIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQ 244
+R + D R++ QLLT +++ V + +GATNRP+ LD AL R GR D+
Sbjct 371 KREVASKD---MERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDR 427
Query 245 LI 246
+
Sbjct 428 EV 429
> mmu:224824 Pex6, AI132582, D130055I09Rik, KIAA4177, MGC6455,
mKIAA4177; peroxisomal biogenesis factor 6; K13339 peroxin-6
Length=981
Score = 214 bits (544), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/245 (46%), Positives = 158/245 (64%), Gaps = 7/245 (2%)
Query 8 GFVGADLAQLCTE---AALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCNP 64
GFV DL L T AA + IR L ++ + + E F AL
Sbjct 630 GFVVGDLYALLTHTCRAACTRIRASGSAGGLSEEDEGDLCVAGFPLLAEDFGQALDQLQT 689
Query 65 SSLRET-VVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPP 123
+ + +P+V W D+GGL++VK+ + E I P++HPE G+L +GPP
Sbjct 690 AHSQAVGAPRIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLSLGLR--RSGLLLHGPP 747
Query 124 GCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELD 183
G GKTLLAKAVA+ECS F+S+KGPEL+ M+ G+SE NVREVF +ARAA+PC++FFDELD
Sbjct 748 GTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELD 807
Query 184 SIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLD 243
S+ RG S GD+GG DRV++QLL E+DG+ +++F +GATNRP+LLD ALLRPGR D
Sbjct 808 SLAPSRGRS-GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFD 866
Query 244 QLIYI 248
+L+++
Sbjct 867 KLVFV 871
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 44/112 (39%), Gaps = 2/112 (1%)
Query 117 VLFYGPPGCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCV 176
VL GPPG GKT A S + + + L E ++ F +AR P V
Sbjct 467 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRPAV 526
Query 177 LFFDELDSIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNR 228
L +D +G R DA A + LL + D + L V T+R
Sbjct 527 LLLTAVDLLGRDRDGLGEDARVAA--TLRHLLLDEDALSRCPPLMVVATTSR 576
> hsa:5190 PEX6, PAF-2, PAF2, PXAAA1; peroxisomal biogenesis factor
6; K13339 peroxin-6
Length=980
Score = 214 bits (544), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/245 (46%), Positives = 161/245 (65%), Gaps = 7/245 (2%)
Query 8 GFVGADLAQLCTEAA-LSCIREKMDLI--DLEDDTIDAQVLNSMAVTQEHFSSALQSCNP 64
GFV DL L T ++ +C R K + L ++ + E F AL+
Sbjct 629 GFVVGDLYALLTHSSRAACTRIKNSGLAGGLTEEDEGELCAAGFPLLAEDFGQALEQLQT 688
Query 65 SSLRET-VVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPP 123
+ + ++P+V W D+GGL+EVK+ + E I P++HPE G+L +GPP
Sbjct 689 AHSQAVGAPKIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLSLGLR--RSGLLLHGPP 746
Query 124 GCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELD 183
G GKTLLAKAVA+ECS F+S+KGPEL+ M+ G+SE NVREVF +ARAA+PC++FFDELD
Sbjct 747 GTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELD 806
Query 184 SIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLD 243
S+ RG S GD+GG DRV++QLL E+DG+ +++F +GATNRP+LLD ALLRPGR D
Sbjct 807 SLAPSRGRS-GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFD 865
Query 244 QLIYI 248
+L+++
Sbjct 866 KLVFV 870
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 48/115 (41%), Gaps = 8/115 (6%)
Query 117 VLFYGPPGCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCV 176
VL GPPGCGKT + A S + + + L G E ++ +F +AR P V
Sbjct 466 VLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAV 525
Query 177 LFFDELDSIGTQRGNSLGDAGGAGDRVM---NQLLTEIDGVGPMKNLFFVGATNR 228
L +D +G R D G RVM LL D + L V T+R
Sbjct 526 LLLTAVDLLGRDR-----DGLGEDARVMAVLRHLLLNEDPLNSCPPLMVVATTSR 575
> pfa:PF14_0126 AAA family ATPase, putative
Length=1219
Score = 208 bits (529), Expect = 2e-53, Method: Composition-based stats.
Identities = 91/197 (46%), Positives = 133/197 (67%), Gaps = 3/197 (1%)
Query 53 EHFSSALQSCNPSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMI 112
+H AL+ PS ++E +++P ++ DIGG + VKR + E ++YP + ++K+ +
Sbjct 808 KHLLKALKYVKPSGMKELYIDIPKTRFKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIE 867
Query 113 PSRGVLFYGPPGCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAA 172
+G+L YGPPGC KTL AKA+ASE NFIS+KGPE+ + + GESE ++R +F KAR
Sbjct 868 SPKGILLYGPPGCSKTLFAKAIASEIHMNFISVKGPEIFSKYVGESEKSIRNIFKKAREN 927
Query 173 SPCVLFFDELDSIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELL 232
PCV+FFDE+DSI R N + +RV+ QLL EIDG+ N+ + ATNRP+L+
Sbjct 928 HPCVIFFDEIDSIAVNRNN---NQNFVSNRVLCQLLNEIDGIKNRLNVIILAATNRPDLI 984
Query 233 DEALLRPGRLDQLIYIP 249
D AL+RPGR D++IY+P
Sbjct 985 DPALMRPGRFDRIIYVP 1001
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 96/222 (43%), Gaps = 44/222 (19%)
Query 66 SLRETVVEVPNVK-WDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPG 124
+L++ VV K + +GG ++K ++ IL P+ + ++ + + +G+L +GPPG
Sbjct 409 NLKKMVVNKKEKKGLNKLGGYNKIKEDIYYYILIPLIYKHIYDAYHIDIHKGILLHGPPG 468
Query 125 CGKTLLAKAVASECS---ANFISI------------------------KGPELLTMW--- 154
CGKT +A + E S F +I PE+ +
Sbjct 469 CGKTYIALLIKEELSLLKKKFCTITQNKTSKQLNNTKNDNNYNNDDNIIIPEIEILKSTD 528
Query 155 ---FGESEANVREVF----DKARAASPC-VLFFDELDSIGTQRGNSLGDAGGAGDRVMNQ 206
+ + + E+F + + + C ++F DE++ + +R + + +
Sbjct 529 LIDYNNTGYKINELFLRCHKRYQEENKCTIIFIDEIEILCKKR-----EENNNMNIYTSV 583
Query 207 LLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIYI 248
LL +DG+ + +GATN +D AL R GR D+ I +
Sbjct 584 LLNNMDGIKKHTHTILIGATNYINKIDLALRRSGRFDKEIEV 625
> dre:792998 si:ch73-197b13.2; K13339 peroxin-6
Length=956
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 134/175 (76%), Gaps = 3/175 (1%)
Query 74 VPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKA 133
+P V W D+GGL++VK+ + + I P++HPE G+L YGPPG GKTLLAKA
Sbjct 675 IPAVSWQDVGGLQQVKKEILDTIQLPLEHPELLSLGLR--RSGLLLYGPPGTGKTLLAKA 732
Query 134 VASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSL 193
VA+EC+ F+S+KGPEL+ M+ G+SE N+R+V KAR+A+PC++FFDELDS+ RG+S
Sbjct 733 VATECTMTFLSVKGPELINMYVGQSEENIRQVSSKARSAAPCIIFFDELDSLAPNRGHS- 791
Query 194 GDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIYI 248
GD+GG DRV++QLL E+DG+ ++F +GATNRP+LLD++LLRPGR D+L+Y+
Sbjct 792 GDSGGVMDRVVSQLLAELDGLHSSGDVFVIGATNRPDLLDQSLLRPGRFDKLVYV 846
Score = 33.9 bits (76), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query 9 FVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCNPS 65
GADL LC++A + ++ K+ I + +D++ L+S+ + E FS AL PS
Sbjct 885 LTGADLYSLCSDAMMCAVKRKISRI---TEGVDSE-LSSLTLCSEDFSEALSGLQPS 937
> mmu:71382 Pex1, 5430414H02Rik, E330005K07Rik, MGC102188, ZWS1;
peroxisomal biogenesis factor 1; K13338 peroxin-1
Length=1244
Score = 202 bits (515), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 136/203 (66%), Gaps = 4/203 (1%)
Query 48 MAVTQEHFSSALQSCNPSSLRETVVEVP-NVKWDDIGGLEEVKRNLQEMILYPIDHPEKF 106
+ +T F AL+ P+SLR + P ++ WD IGGL EV++ L + I P +PE F
Sbjct 768 LTLTTSDFQKALRGFLPASLRNVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELF 827
Query 107 EKFGMIPSRGVLFYGPPGCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVF 166
+ G+L YGPPG GKTLLA VA E NFISIKGPELL+ + G SE VR+VF
Sbjct 828 ANLPIRQRTGILLYGPPGTGKTLLAGVVARESGMNFISIKGPELLSKYIGASEQAVRDVF 887
Query 167 DKARAASPCVLFFDELDSIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGAT 226
+A+AA PC+LFFDE +SI +RG+ D G DRV+NQLLT++DGV ++ ++ + AT
Sbjct 888 IRAQAAKPCILFFDEFESIAPRRGH---DNTGVTDRVVNQLLTQLDGVEGLQGVYVLAAT 944
Query 227 NRPELLDEALLRPGRLDQLIYIP 249
+RP+L+D ALLRPGRLD+ +Y P
Sbjct 945 SRPDLIDPALLRPGRLDKCVYCP 967
> ath:AT2G03670 CDC48B; CDC48B; ATP binding / ATPase/ nucleoside-triphosphatase/
nucleotide binding
Length=603
Score = 202 bits (515), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 104/246 (42%), Positives = 150/246 (60%), Gaps = 16/246 (6%)
Query 5 STHGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCNP 64
S +G+VGADL LC EA +S + D S+ +T + F A P
Sbjct 226 SCNGYVGADLEALCREATISASKRSSD---------------SLILTSQDFKIAKSVVGP 270
Query 65 SSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPG 124
S R VE+P V WDD+GGL+++K+ LQ+ + +PI H F K G+ P RG+L +GPPG
Sbjct 271 SINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPG 330
Query 125 CGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDS 184
C KT LAKA A+ A+F S+ EL +M+ GE EA +R F +AR ASP ++FFDE D
Sbjct 331 CSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADV 390
Query 185 IGTQRGN-SLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLD 243
+ +RG+ S ++ G+R+++ LLTE+DG+ K + + ATNRP +D AL+RPGR D
Sbjct 391 VACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFD 450
Query 244 QLIYIP 249
++Y+P
Sbjct 451 LVLYVP 456
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 99/184 (53%), Gaps = 16/184 (8%)
Query 76 NVKWD---DIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAK 132
N KW +IGG E + L+E+I++P +P + G+ RG+L YGPPG GKT L +
Sbjct 15 NEKWRAEAEIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVR 74
Query 133 AVASECSANFISIKGPELLTMWFGESEANVREVFDKARAAS----PCVLFFDELDSIGTQ 188
AV EC A+ I + + GESE +RE F +A + + P V+F DE+D + +
Sbjct 75 AVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPR 134
Query 189 RGNSLGDAGGAGD-RVMNQLLTEIDGVGPMKN---LFFVGATNRPELLDEALLRPGRLDQ 244
R DA D R+ +QL T +D P + + V +TNR + +D AL R GR D
Sbjct 135 R-----DARREQDVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDA 189
Query 245 LIYI 248
L+ +
Sbjct 190 LVEV 193
> hsa:5189 PEX1, ZWS, ZWS1; peroxisomal biogenesis factor 1; K13338
peroxin-1
Length=1283
Score = 201 bits (511), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/245 (44%), Positives = 148/245 (60%), Gaps = 15/245 (6%)
Query 6 THGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCNPS 65
T GFV D L A S L +I + + +T F AL+ P+
Sbjct 776 TGGFVARDFTVLVDRAIHS---------RLSRQSISTR--EKLVLTTLDFQKALRGFLPA 824
Query 66 SLRETVVEVP-NVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPG 124
SLR + P ++ WD IGGL EV++ L + I P +PE F + G+L YGPPG
Sbjct 825 SLRSVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPG 884
Query 125 CGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDS 184
GKTLLA +A E NFIS+KGPELL+ + G SE VR++F +A+AA PC+LFFDE +S
Sbjct 885 TGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFES 944
Query 185 IGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQ 244
I +RG+ D G DRV+NQLLT++DGV ++ ++ + AT+RP+L+D ALLRPGRLD+
Sbjct 945 IAPRRGH---DNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDK 1001
Query 245 LIYIP 249
+Y P
Sbjct 1002 CVYCP 1006
> pfa:MAL8P1.92 ATPase, putative
Length=1200
Score = 199 bits (507), Expect = 6e-51, Method: Composition-based stats.
Identities = 88/180 (48%), Positives = 128/180 (71%), Gaps = 2/180 (1%)
Query 69 ETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKT 128
E + EVPN+ D+IG L+++K+ L+ + P+ + ++ G+ S G+L YGPPGCGKT
Sbjct 665 ENICEVPNINLDNIGSLKKIKKILESKFILPVKYSNIYKHLGINKSMGILLYGPPGCGKT 724
Query 129 LLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQ 188
+LAKA+++E ANFI+IKGPE+L + GESE VRE+F A PC++FFDE+DSI
Sbjct 725 MLAKAISNEMKANFIAIKGPEILNKYVGESEKKVREIFSYASVYKPCLIFFDEIDSICIN 784
Query 189 RGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIYI 248
R N+ + A DRV+NQLL+E+DG+ + ++ + TNRP+++D+ALLR GR DQLIYI
Sbjct 785 RSNN--KSVSASDRVVNQLLSEMDGLSQREGVYIIATTNRPDIIDKALLRSGRFDQLIYI 842
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 18/132 (13%)
Query 46 NSMAVTQEHFSSALQSCNPSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEK 105
N + QEH S+ N + + +++ N +D G++ +K++ ILY I +P K
Sbjct 226 NMNHMKQEHNKSSFN--NSNKIINSIIS--NKTLNDFKGIKNIKKD----ILYSIIYPYK 277
Query 106 FEKFGMIPSRGVLFYGPPGCGKTLLAKAVASECSANFISIKGPELLTMWFGESEAN---- 161
F + + + +G G GKT L+ A+A EC F IK PE + +++ N
Sbjct 278 FRLSNL--NCIINIFGTSGTGKTTLSYAIAGECGCPFFYIKLPEYIKYISNDNKNNKLRI 335
Query 162 ----VREVFDKA 169
++ +DKA
Sbjct 336 LFEHIKNEYDKA 347
> tgo:TGME49_055210 peroxisomal-type ATPase, putative (EC:2.7.1.71
2.7.10.2)
Length=705
Score = 199 bits (506), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 128/175 (73%), Gaps = 5/175 (2%)
Query 74 VPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPPGCGKTLLAKA 133
VP V W D+GG+E K+ +++ I P++ PE F+ G+ G+L +GPPG GKTLLAKA
Sbjct 431 VPTVHWQDVGGIETAKQEIRDYISLPLERPELFD--GLKTRGGILLFGPPGTGKTLLAKA 488
Query 134 VASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSL 193
VA+EC NFIS+KGPELL M+ GESE NVR VF KARA P VLFFDELD++ +RG +
Sbjct 489 VATECGVNFISVKGPELLNMYIGESEKNVRMVFQKARACKPSVLFFDELDALLPRRGRT- 547
Query 194 GDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLDQLIYI 248
D+ G DR++ QLL EIDG+ N+F +G+TNR EL+D+A+LR GRLD+ +YI
Sbjct 548 SDSAGVLDRIVAQLLAEIDGLP--SNVFVIGSTNRIELIDKAVLRAGRLDRCVYI 600
> xla:443867 pex1, MGC79116; peroxisomal biogenesis factor 1;
K13338 peroxin-1
Length=1205
Score = 196 bits (499), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 106/250 (42%), Positives = 150/250 (60%), Gaps = 25/250 (10%)
Query 6 THGFVGAD---LAQLCTEAALSCIR--EKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQ 60
T GFV D + + E+++S R K DL+ ++ F AL+
Sbjct 769 TEGFVARDFTIIVERAIESSVSTRRIFRKQDLV----------------LSMTDFQKALK 812
Query 61 SCNPSSLRETVVEVPNVK-WDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLF 119
P SLR + P + W+ +GGL +V++ L++ + P +PE F + GVL
Sbjct 813 GFTPLSLRNAQLHKPKKQGWNMVGGLHDVRQVLKDTVELPAKYPELFANLPIRHRSGVLL 872
Query 120 YGPPGCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFF 179
YG PG GKTLLA +A E NFISIKGPELL+ + G SE VR+VF +A+AA PC+LFF
Sbjct 873 YGAPGTGKTLLAGVIAHESRMNFISIKGPELLSKYIGASEQAVRDVFTRAQAAKPCILFF 932
Query 180 DELDSIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRP 239
DE DSI +RG+ D G DRV+NQ+LT++DGV ++ ++ + AT+RP+L+D ALLRP
Sbjct 933 DEFDSIAPRRGH---DNTGVTDRVVNQMLTQLDGVEGLQGVYVLAATSRPDLIDPALLRP 989
Query 240 GRLDQLIYIP 249
GRLD+ +Y P
Sbjct 990 GRLDECLYCP 999
Lambda K H
0.319 0.137 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 8892779092
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40