bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 164,496 sequences; 82,071,388 total letters Query= Eten_0452_orf2 Length=169 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_064460 SIN-like domain-containing protein (EC:3.2.1... 105 9e-23 cpv:cgd8_1460 Sex-lethal interacting like 34.3 0.21 ath:AT5G49530 SIN-like family protein; K14721 DNA-directed RNA... 32.7 0.62 mmu:26939 Polr3e, RPC5, Sin; polymerase (RNA) III (DNA directe... 32.0 1.0 hsa:55718 POLR3E, RPC5, SIN; polymerase (RNA) III (DNA directe... 30.8 2.2 mmu:19684 Rdx, AA516625; radixin; K05762 radixin 29.6 4.7 hsa:5962 RDX, DFNB24; radixin; K05762 radixin 29.6 5.5 hsa:23338 PHF15, JADE2, KIAA0239; PHD finger protein 15 29.3 hsa:22985 ACIN1, ACINUS, ACN, DKFZp667N107, KIAA0670, fSAP152;... 29.3 7.2 > tgo:TGME49_064460 SIN-like domain-containing protein (EC:3.2.1.3); K14721 DNA-directed RNA polymerase III subunit RPC5 Length=836 Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 64/169 (37%), Positives = 92/169 (54%), Gaps = 39/169 (23%) Query 25 HVLKSKVVKGTSCSYAVGLIKEKNLFIIPIHSLLQFKPDFAAFEALQQQQQ-----QQLS 79 HVLKS+ CSYAVG++K+ ++I P+ +LQF+PDF+ + LQQ+ ++LS Sbjct 233 HVLKSQRALAGDCSYAVGILKKDKIYITPVDHVLQFRPDFSQVDQLQQKASSCPAGRRLS 292 Query 80 SSG----------RRAAHHAD---AAAAAAAEQQQQQ--------------QQQLVQPL- 111 +SG RR D A + AAE Q + Q+ +P Sbjct 293 ASGDPRASGPGVRRRNEEEKDEKSEAPSGAAEPPQGESAAGGRDPQRPGVPQRSGERPAT 352 Query 112 ------GETRARISHSKQRDIEESEPWLPIDAFYDADSPEAYDLINSLV 154 GE R +ISHS+QRDIEESE W+P++ FYDA++PEA D+I +L Sbjct 353 VVASSPGEGRGKISHSRQRDIEESEHWIPLETFYDAETPEALDIIRTLC 401 > cpv:cgd8_1460 Sex-lethal interacting like Length=895 Score = 34.3 bits (77), Expect = 0.21, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 28/130 (21%) Query 47 KNLFIIPIHSLLQFKPDFAAFEALQQQQQQQLSSSGRRAAHHADAAAAAAAEQQQQQQQQ 106 K L+I PI S+ QF+P+F++ + Q S+ + +A +++ Q Sbjct 122 KKLYITPISSVQQFRPNFSSID--------QKRSASMNVGMVERLSESADKDERNQSLDD 173 Query 107 LVQPLGETRARISHSKQRDIEES-------------------EPWLPIDAFYDADSPEAY 147 LV G A + H + E W+ I Y ++S E+ Sbjct 174 LVLNHGNN-ATLDHDMNSSSNNNPLYSGNFPLDSGRLYTTGFENWIKIPCIYPSNSYESL 232 Query 148 DLINSLVDNY 157 ++I L+D Y Sbjct 233 EIIKMLMDVY 242 > ath:AT5G49530 SIN-like family protein; K14721 DNA-directed RNA polymerase III subunit RPC5 Length=689 Score = 32.7 bits (73), Expect = 0.62, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 38/78 (48%), Gaps = 0/78 (0%) Query 24 QHVLKSKVVKGTSCSYAVGLIKEKNLFIIPIHSLLQFKPDFAAFEALQQQQQQQLSSSGR 83 + LK+ + + YAVG++ L + P+H++ Q +P + + ++++Q++ + Sbjct 191 KQTLKTTWKQPPTLDYAVGVLSGDKLHLNPVHAVAQLRPSMQSLSSDKKKKQEESTEESV 250 Query 84 RAAHHADAAAAAAAEQQQ 101 + + A+ Q+ Sbjct 251 GTSKKQNKGVQQASTDQK 268 > mmu:26939 Polr3e, RPC5, Sin; polymerase (RNA) III (DNA directed) polypeptide E; K14721 DNA-directed RNA polymerase III subunit RPC5 Length=684 Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust. Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 22/115 (19%) Query 39 YAVGLIKEKNLFIIPIHSLLQFKPDFAAFEALQQQQQQQLSSSGRRAAHHA-DAAAAAAA 97 YA L ++ L + P+H +LQ +P F+ + + ++ R AA+ A D++ A Sbjct 88 YAAALYRQGELHLTPLHGILQLRPSFSYLDKADAKHRE------REAANEAGDSSQDEAE 141 Query 98 EQQQQQQQQLVQPLGETRARISHSKQRDIEE---------SEPWLPIDAFYDADS 143 E +Q + +P E ++QR ++ EPW+ + + DS Sbjct 142 EDVKQITVRFSRPESE------QARQRRVQSYEFLQKKHAEEPWVHLHYYGMRDS 190 > hsa:55718 POLR3E, RPC5, SIN; polymerase (RNA) III (DNA directed) polypeptide E (80kD); K14721 DNA-directed RNA polymerase III subunit RPC5 Length=708 Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust. Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Query 24 QHVLKSKVVKGTSCSYAVGLIKEKNLFIIPIHSLLQFKPDFAAFE 68 Q S+ TS YA L ++ L + P+H +LQ +P F+ + Sbjct 100 QTFCSSQTTSNTS-RYAAALYRQGELHLTPLHGILQLRPSFSYLD 143 > mmu:19684 Rdx, AA516625; radixin; K05762 radixin Length=583 Score = 29.6 bits (65), Expect = 4.7, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 7/58 (12%) Query 68 EALQQQQQQQLSSSG-------RRAAHHADAAAAAAAEQQQQQQQQLVQPLGETRARI 118 +AL+ +Q++Q + RRAA A +A A A Q + Q+QL L E A+I Sbjct 371 KALELEQERQRAKEEAERLDRERRAAEEAKSAIAKQAADQMKNQEQLAAELAEFTAKI 428 > hsa:5962 RDX, DFNB24; radixin; K05762 radixin Length=583 Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 0/51 (0%) Query 68 EALQQQQQQQLSSSGRRAAHHADAAAAAAAEQQQQQQQQLVQPLGETRARI 118 E + +++ + RRAA A +A A A Q + Q+QL L E A+I Sbjct 378 ERKRAKEEAERLEKERRAAEEAKSAIAKQAADQMKNQEQLAAELAEFTAKI 428 > hsa:23338 PHF15, JADE2, KIAA0239; PHD finger protein 15 Length=790 Score = 29.3 bits (64), Expect = 5.9, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 2/72 (2%) Query 95 AAAEQQQQQQQQLVQPLGETRARISHSKQRDIEESEPWLPIDAFYDADSPEAY--DLINS 152 A AE + +++ PL A+ S S E S+P P + YD D +AY +LINS Sbjct 93 AGAEAIPEPVVRILPPLEGPPAQASPSSTMLGEGSQPDWPGGSRYDLDEIDAYWLELINS 152 Query 153 LVDNYEAPAADD 164 + E P D+ Sbjct 153 ELKEMERPELDE 164 > hsa:22985 ACIN1, ACINUS, ACN, DKFZp667N107, KIAA0670, fSAP152; apoptotic chromatin condensation inducer 1; K12875 apoptotic chromatin condensation inducer in the nucleus Length=1328 Score = 29.3 bits (64), Expect = 7.2, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 0/64 (0%) Query 71 QQQQQQQLSSSGRRAAHHADAAAAAAAEQQQQQQQQLVQPLGETRARISHSKQRDIEESE 130 + Q+Q+ L GR +A + A QQQ+++ + PL E I S+ + Sbjct 327 RSQEQEVLERGGRFTRSQEEARKSHLARQQQEKEMKTTSPLEEEEREIKSSQGLKEKSKS 386 Query 131 PWLP 134 P P Sbjct 387 PSPP 390 Lambda K H 0.314 0.126 0.350 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 4222647260 Database: egene_temp_file_orthology_annotation_similarity_blast_database_866 Posted date: Sep 17, 2011 2:57 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40