bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_0394_orf3
Length=157
Score E
Sequences producing significant alignments: (Bits) Value
mmu:12831 Col5a1, AI413331; collagen, type V, alpha 1; K06236 ... 300 1e-81
hsa:1289 COL5A1; collagen, type V, alpha 1; K06236 collagen, t... 287 1e-77
dre:100322205 si:dkey-87m23.1 270 1e-72
mmu:12814 Col11a1, C530001D20Rik, cho; collagen, type XI, alph... 242 4e-64
hsa:1301 COL11A1, CO11A1, COLL6, STL2; collagen, type XI, alph... 239 4e-63
dre:565402 col11a1a, wu:fb34e11, wu:fc11b03, zgc:158335; colla... 236 2e-62
dre:555202 col11a1b; collagen type XI alpha-1b 232 5e-61
dre:100334307 novel collagen protein-like 229 3e-60
dre:561679 col11a2, col11a1; collagen type XI alpha-2; K06236 ... 194 7e-50
dre:100330457 collagen alpha-1(V) chain-like 188 7e-48
dre:100330523 col5a3a; collagen type V alpha-3a 186 2e-47
dre:100463515 col5a3b; collagen type V alpha-3b 164 8e-41
hsa:50509 COL5A3; collagen, type V, alpha 3; K06236 collagen, ... 161 9e-40
mmu:53867 Col5a3; collagen, type V, alpha 3; K06236 collagen, ... 150 1e-36
mmu:12815 Col11a2; collagen, type XI, alpha 2; K06236 collagen... 122 6e-28
xla:397738 col2a1, MGC132344, col2a1a; collagen, type II, alph... 109 4e-24
xla:397739 col2a1b; collagen, type II, alpha 1; K06236 collage... 107 1e-23
mmu:12824 Col2a1, Col2, Col2a, Col2a-1, Del1, Dmm, MGC90638; c... 107 2e-23
mmu:12842 Col1a1, Col1a-1, Cola-1, Cola1, Mov-13, Mov13; colla... 105 4e-23
hsa:1277 COL1A1, OI4; collagen, type I, alpha 1; K06236 collag... 103 3e-22
dre:562496 col2a1a, col2a1, coll2a1, fb38c06, fc10c01, wu:fb38... 102 4e-22
hsa:1280 COL2A1, ANFH, AOM, COL11A3, MGC131516, SEDC; collagen... 102 5e-22
hsa:1281 COL3A1, EDS4A, FLJ34534; collagen, type III, alpha 1;... 102 7e-22
dre:337158 col1a1a, alpha1(I), cb21, col1a1, sb:cb21, sb:cb384... 101 1e-21
dre:336471 col1a2, alpha2(I), hm:zehn2357, wu:fa98d05, wu:fa99... 100 3e-21
xla:398983 col3a1, MGC69046; collagen, type III, alpha 1 (Ehle... 99.8 3e-21
mmu:12825 Col3a1, AW550625, Col3a-1, KIAA4231, MMS10-W, Ms10w,... 99.0 6e-21
dre:100333692 Col2a1-like 98.6 7e-21
mmu:12832 Col5a2, 1110014L14Rik, D230017N05; collagen, type V,... 98.6 8e-21
hsa:1290 COL5A2, MGC105115; collagen, type V, alpha 2; K06236 ... 97.8 1e-20
xla:380515 col1a1, MGC52532; collagen, type I, alpha 1; K06236... 97.4 2e-20
dre:325675 col1a1b, alpha3(I), col1a3, hm:zeh0348, wu:fa95h05,... 97.1 2e-20
dre:564821 col5a2l, COL5A2, im:7038599, si:by143e18.1, si:dz16... 96.3 4e-20
mmu:12843 Col1a2, AA960264, AI325291, Col1a-2, Cola-2, Cola2, ... 94.0 2e-19
hsa:1278 COL1A2, OI4; collagen, type I, alpha 2; K06236 collag... 89.4 5e-18
xla:380419 col1a2, MGC52958; collagen, type 1, alpha 2; K06236... 85.9 5e-17
dre:100006366 procollagen, type V, alpha 2-like 84.3 2e-16
mmu:373864 Col27a1, 5730512J02Rik, AI449266, mKIAA1870; collag... 60.1 3e-09
hsa:85301 COL27A1, FLJ11895, KIAA1870, MGC11337; collagen, typ... 59.7 4e-09
dre:564099 novel collagen protein-like 55.5 7e-08
dre:100004431 si:dkey-61l1.4 51.2 1e-06
hsa:255631 COL24A1, MGC142214; collagen, type XXIV, alpha 1 48.1
dre:100004688 col27a1a, sb:cb221; collagen, type XXVII, alpha 1a 44.3 1e-04
dre:560145 col27a1b, col27a1; collagen, type XXVII, alpha 1b 43.9 2e-04
mmu:71355 Col24a1, 5430404K19Rik, MGC107332; collagen, type XX... 42.4 6e-04
cel:Y65B4A.1 hypothetical protein; K13093 HIV Tat-specific fac... 31.2 1.5
dre:100332483 collagen, type XI, alpha 2-like 30.8 1.8
cpv:cgd6_4080 hypothetical protein 30.0 3.4
ath:AT5G23960 TPS21; TPS21 (TERPENE SYNTHASE 21); (-)-E-beta-c... 29.3 5.5
cel:C36E8.4 hypothetical protein 29.3 6.2
> mmu:12831 Col5a1, AI413331; collagen, type V, alpha 1; K06236
collagen, type I/II/III/V/XI, alpha
Length=1838
Score = 300 bits (769), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 134/149 (89%), Positives = 144/149 (96%), Gaps = 0/149 (0%)
Query 9 SKMARWPKEQPSTWYSQYKRGSLLSYVDAEGNPVGVVQMTFLRLLSASAHQNITYNCYQS 68
+++ WPKE P +W+S++KRG LLSYVDAEGNPVGVVQMTFLRLLSASAHQN+TYNCYQS
Sbjct 1690 ARITSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQNVTYNCYQS 1749
Query 69 VAWQDAATGSYDKAMRFLGSNDEEMSYDNSPYIRALVDGCATKKGYQKTVLEIDTPKVEQ 128
VAWQDAATGSYDKA+RFLGSNDEEMSYDN+PYIRALVDGCATKKGYQKTVLEIDTPKVEQ
Sbjct 1750 VAWQDAATGSYDKAIRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKTVLEIDTPKVEQ 1809
Query 129 VPIVDIMFNDFGEASQKFGFEVGPACFLG 157
VPIVDIMFNDFGEASQKFGFEVGPACFLG
Sbjct 1810 VPIVDIMFNDFGEASQKFGFEVGPACFLG 1838
> hsa:1289 COL5A1; collagen, type V, alpha 1; K06236 collagen,
type I/II/III/V/XI, alpha
Length=1838
Score = 287 bits (734), Expect = 1e-77, Method: Composition-based stats.
Identities = 132/149 (88%), Positives = 144/149 (96%), Gaps = 0/149 (0%)
Query 9 SKMARWPKEQPSTWYSQYKRGSLLSYVDAEGNPVGVVQMTFLRLLSASAHQNITYNCYQS 68
+++ WPKE P +W+S++KRG LLSYVDAEGNPVGVVQMTFLRLLSASAHQN+TY+CYQS
Sbjct 1690 ARITSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQNVTYHCYQS 1749
Query 69 VAWQDAATGSYDKAMRFLGSNDEEMSYDNSPYIRALVDGCATKKGYQKTVLEIDTPKVEQ 128
VAWQDAATGSYDKA+RFLGSNDEEMSYDN+PYIRALVDGCATKKGYQKTVLEIDTPKVEQ
Sbjct 1750 VAWQDAATGSYDKALRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKTVLEIDTPKVEQ 1809
Query 129 VPIVDIMFNDFGEASQKFGFEVGPACFLG 157
VPIVDIMFNDFGEASQKFGFEVGPACF+G
Sbjct 1810 VPIVDIMFNDFGEASQKFGFEVGPACFMG 1838
> dre:100322205 si:dkey-87m23.1
Length=349
Score = 270 bits (690), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 123/149 (82%), Positives = 137/149 (91%), Gaps = 0/149 (0%)
Query 9 SKMARWPKEQPSTWYSQYKRGSLLSYVDAEGNPVGVVQMTFLRLLSASAHQNITYNCYQS 68
SKMARWPK+ P TWYS+YKRGS+LSYVDAEGN +GVVQMTFLRLLSA+A QN+TYNCYQS
Sbjct 201 SKMARWPKDSPGTWYSRYKRGSMLSYVDAEGNAIGVVQMTFLRLLSATARQNLTYNCYQS 260
Query 69 VAWQDAATGSYDKAMRFLGSNDEEMSYDNSPYIRALVDGCATKKGYQKTVLEIDTPKVEQ 128
VAW D SYDKA+RFLGSNDEEMSYDN+PYIRA+VDGCA KKGY+KT+LEI+TPKVEQ
Sbjct 261 VAWHDQDQDSYDKAIRFLGSNDEEMSYDNNPYIRAVVDGCALKKGYEKTILEINTPKVEQ 320
Query 129 VPIVDIMFNDFGEASQKFGFEVGPACFLG 157
VP VDIMFNDFG A+QKFGFEVGPACF+G
Sbjct 321 VPFVDIMFNDFGGATQKFGFEVGPACFIG 349
> mmu:12814 Col11a1, C530001D20Rik, cho; collagen, type XI, alpha
1; K06236 collagen, type I/II/III/V/XI, alpha
Length=1804
Score = 242 bits (617), Expect = 4e-64, Method: Composition-based stats.
Identities = 103/148 (69%), Positives = 133/148 (89%), Gaps = 0/148 (0%)
Query 10 KMARWPKEQPSTWYSQYKRGSLLSYVDAEGNPVGVVQMTFLRLLSASAHQNITYNCYQSV 69
+++ WPKE+P +WYS++KRG LLSY+D EGN + +VQMTFL+LL+ASA QN TYNC+QS
Sbjct 1657 RISSWPKEKPGSWYSEFKRGKLLSYLDVEGNSINMVQMTFLKLLTASARQNFTYNCHQSA 1716
Query 70 AWQDAATGSYDKAMRFLGSNDEEMSYDNSPYIRALVDGCATKKGYQKTVLEIDTPKVEQV 129
AW D +GSYDKA+RFLGSNDEEMSY+N+P+I+AL DGCA++KGY+KTV+EI+TPK++QV
Sbjct 1717 AWYDVLSGSYDKALRFLGSNDEEMSYENNPHIKALYDGCASRKGYEKTVIEINTPKIDQV 1776
Query 130 PIVDIMFNDFGEASQKFGFEVGPACFLG 157
PI+D+M NDFG+ +QKFGFEVGPACFLG
Sbjct 1777 PIIDVMINDFGDQNQKFGFEVGPACFLG 1804
> hsa:1301 COL11A1, CO11A1, COLL6, STL2; collagen, type XI, alpha
1; K06236 collagen, type I/II/III/V/XI, alpha
Length=1767
Score = 239 bits (609), Expect = 4e-63, Method: Composition-based stats.
Identities = 101/148 (68%), Positives = 132/148 (89%), Gaps = 0/148 (0%)
Query 10 KMARWPKEQPSTWYSQYKRGSLLSYVDAEGNPVGVVQMTFLRLLSASAHQNITYNCYQSV 69
+++ WPKE+P +W+S++KRG LLSY+D EGN + +VQMTFL+LL+ASA QN TY+C+QS
Sbjct 1620 RISSWPKEKPGSWFSEFKRGKLLSYLDVEGNSINMVQMTFLKLLTASARQNFTYHCHQSA 1679
Query 70 AWQDAATGSYDKAMRFLGSNDEEMSYDNSPYIRALVDGCATKKGYQKTVLEIDTPKVEQV 129
AW D ++GSYDKA+RFLGSNDEEMSYDN+P+I+ L DGCA++KGY+KTV+EI+TPK++QV
Sbjct 1680 AWYDVSSGSYDKALRFLGSNDEEMSYDNNPFIKTLYDGCASRKGYEKTVIEINTPKIDQV 1739
Query 130 PIVDIMFNDFGEASQKFGFEVGPACFLG 157
PIVD+M NDFG+ +QKFGFEVGP CFLG
Sbjct 1740 PIVDVMINDFGDQNQKFGFEVGPVCFLG 1767
> dre:565402 col11a1a, wu:fb34e11, wu:fc11b03, zgc:158335; collagen,
type XI, alpha 1a; K06236 collagen, type I/II/III/V/XI,
alpha
Length=1736
Score = 236 bits (603), Expect = 2e-62, Method: Composition-based stats.
Identities = 103/148 (69%), Positives = 130/148 (87%), Gaps = 0/148 (0%)
Query 10 KMARWPKEQPSTWYSQYKRGSLLSYVDAEGNPVGVVQMTFLRLLSASAHQNITYNCYQSV 69
+++ WPKE P +W+S++KRG +LSYVDAEGN + +VQMTFL+LL+ASA QN+TY+C+QSV
Sbjct 1589 RISSWPKEVPGSWFSEFKRGKILSYVDAEGNSINMVQMTFLKLLTASARQNLTYSCHQSV 1648
Query 70 AWQDAATGSYDKAMRFLGSNDEEMSYDNSPYIRALVDGCATKKGYQKTVLEIDTPKVEQV 129
AW DA T SYD+A+ FLGSNDEE+SYDN+PYI+AL DGCA +KGY KTVLEI+TPK++QV
Sbjct 1649 AWHDATTDSYDRALHFLGSNDEEISYDNNPYIKALSDGCAVRKGYGKTVLEINTPKIDQV 1708
Query 130 PIVDIMFNDFGEASQKFGFEVGPACFLG 157
PIVD+ F DFG+ +QKFGFEVGP CFLG
Sbjct 1709 PIVDVKFTDFGDPNQKFGFEVGPVCFLG 1736
> dre:555202 col11a1b; collagen type XI alpha-1b
Length=1815
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 98/148 (66%), Positives = 127/148 (85%), Gaps = 0/148 (0%)
Query 10 KMARWPKEQPSTWYSQYKRGSLLSYVDAEGNPVGVVQMTFLRLLSASAHQNITYNCYQSV 69
+++ WPKE P +W+S++KRG +LSYVD E + + VQMTFL+LLS+SA QN TY C+QSV
Sbjct 1668 RISNWPKESPGSWFSEFKRGKILSYVDVEESSINSVQMTFLKLLSSSARQNFTYICHQSV 1727
Query 70 AWQDAATGSYDKAMRFLGSNDEEMSYDNSPYIRALVDGCATKKGYQKTVLEIDTPKVEQV 129
AW DA +YDKA+RFLGSNDEEMSYDN+P+I+AL DGC+ K+GY K+V+EI+TP++EQV
Sbjct 1728 AWYDAKADNYDKALRFLGSNDEEMSYDNNPFIKALSDGCSLKQGYSKSVMEINTPRIEQV 1787
Query 130 PIVDIMFNDFGEASQKFGFEVGPACFLG 157
PI+D+M NDFGE+SQ+FGFEVGP CFLG
Sbjct 1788 PIIDVMLNDFGESSQRFGFEVGPVCFLG 1815
> dre:100334307 novel collagen protein-like
Length=128
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 105/126 (83%), Positives = 116/126 (92%), Gaps = 0/126 (0%)
Query 32 LSYVDAEGNPVGVVQMTFLRLLSASAHQNITYNCYQSVAWQDAATGSYDKAMRFLGSNDE 91
LSYVDAEGN +GVVQMTFLRLLSA+A QN+TYNCYQSVAW D SYDKA+RFLGSNDE
Sbjct 3 LSYVDAEGNAIGVVQMTFLRLLSATARQNLTYNCYQSVAWHDQDQDSYDKAIRFLGSNDE 62
Query 92 EMSYDNSPYIRALVDGCATKKGYQKTVLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVG 151
EMSYDN+PYIRA+VDGCA KKGY+KT+LEI+TPKVEQVP VDIMFNDFG A+QKFGFEVG
Sbjct 63 EMSYDNNPYIRAVVDGCALKKGYEKTILEINTPKVEQVPFVDIMFNDFGGATQKFGFEVG 122
Query 152 PACFLG 157
PACF+G
Sbjct 123 PACFIG 128
> dre:561679 col11a2, col11a1; collagen type XI alpha-2; K06236
collagen, type I/II/III/V/XI, alpha
Length=1695
Score = 194 bits (494), Expect = 7e-50, Method: Composition-based stats.
Identities = 88/149 (59%), Positives = 117/149 (78%), Gaps = 1/149 (0%)
Query 10 KMARWPKEQPSTWYSQYKRGSLLSYVDAEGNPVGVVQMTFLRLLSASAHQNITYNCYQSV 69
KM W KE+P + +SQ+ +G+ SYVD+ G VGVVQ+ FLRLLS A QN+TY+C +SV
Sbjct 1547 KMNSWIKEKPGSLFSQFAKGNKFSYVDSVGEAVGVVQLGFLRLLSVQARQNLTYHCQRSV 1606
Query 70 AWQDAAT-GSYDKAMRFLGSNDEEMSYDNSPYIRALVDGCATKKGYQKTVLEIDTPKVEQ 128
AW D T G Y +A+R G+NDEE+SY+ SPYI+AL+DGC+ +KG +TVLE++TP+VEQ
Sbjct 1607 AWTDQTTDGGYKRALRLQGANDEEISYETSPYIKALIDGCSYRKGLDRTVLEVNTPQVEQ 1666
Query 129 VPIVDIMFNDFGEASQKFGFEVGPACFLG 157
+P++DI +DFGE +QKFGFEVGP CFLG
Sbjct 1667 LPLLDIRISDFGEDNQKFGFEVGPVCFLG 1695
> dre:100330457 collagen alpha-1(V) chain-like
Length=586
Score = 188 bits (477), Expect = 7e-48, Method: Composition-based stats.
Identities = 82/153 (53%), Positives = 110/153 (71%), Gaps = 0/153 (0%)
Query 5 RILQSKMARWPKEQPSTWYSQYKRGSLLSYVDAEGNPVGVVQMTFLRLLSASAHQNITYN 64
R K+A W KE+P +WYSQY++G SY+D EGNPV VVQMTFL+LLSA+A Q T++
Sbjct 434 RFETVKLAAWNKEKPGSWYSQYRKGKQFSYIDTEGNPVPVVQMTFLKLLSATAMQTFTFS 493
Query 65 CYQSVAWQDAATGSYDKAMRFLGSNDEEMSYDNSPYIRALVDGCATKKGYQKTVLEIDTP 124
C S+ W D + ++ A+RF GSNDEEM+ D SP+I AL DGC T+KG TVL+I++P
Sbjct 494 CQNSIGWYDMSNHNHQHALRFRGSNDEEMTQDKSPFITALYDGCQTRKGLDTTVLQINSP 553
Query 125 KVEQVPIVDIMFNDFGEASQKFGFEVGPACFLG 157
+ E +P++D+ +DFG +QKFGF VG CF G
Sbjct 554 RSELLPLIDVAISDFGSNNQKFGFHVGTVCFSG 586
> dre:100330523 col5a3a; collagen type V alpha-3a
Length=1887
Score = 186 bits (473), Expect = 2e-47, Method: Composition-based stats.
Identities = 82/153 (53%), Positives = 110/153 (71%), Gaps = 0/153 (0%)
Query 5 RILQSKMARWPKEQPSTWYSQYKRGSLLSYVDAEGNPVGVVQMTFLRLLSASAHQNITYN 64
R K+A W KE+P +WYSQY++G SY+D EGNPV VVQMTFL+LLSA+A Q T++
Sbjct 1735 RFETVKLAAWNKEKPGSWYSQYRKGKQFSYIDTEGNPVPVVQMTFLKLLSATAMQTFTFS 1794
Query 65 CYQSVAWQDAATGSYDKAMRFLGSNDEEMSYDNSPYIRALVDGCATKKGYQKTVLEIDTP 124
C S+ W D + ++ A+RF GSNDEEM+ D SP+I AL DGC T+KG TVL+I++P
Sbjct 1795 CQNSIGWYDMSNHNHQHALRFRGSNDEEMTQDKSPFITALYDGCQTRKGLDTTVLQINSP 1854
Query 125 KVEQVPIVDIMFNDFGEASQKFGFEVGPACFLG 157
+ E +P++D+ +DFG +QKFGF VG CF G
Sbjct 1855 RSELLPLIDVAISDFGSNNQKFGFHVGTVCFSG 1887
> dre:100463515 col5a3b; collagen type V alpha-3b
Length=1723
Score = 164 bits (416), Expect = 8e-41, Method: Composition-based stats.
Identities = 75/148 (50%), Positives = 102/148 (68%), Gaps = 0/148 (0%)
Query 10 KMARWPKEQPSTWYSQYKRGSLLSYVDAEGNPVGVVQMTFLRLLSASAHQNITYNCYQSV 69
KMA W KE+P TW+S +K+GS SYVD +GNPV VVQ+ FL+LLSA+A Q+ TY C S
Sbjct 1576 KMASWSKEKPGTWFSTFKKGSQFSYVDVDGNPVHVVQLGFLKLLSATARQSFTYVCQNSA 1635
Query 70 AWQDAATGSYDKAMRFLGSNDEEMSYDNSPYIRALVDGCATKKGYQKTVLEIDTPKVEQV 129
W D +T SY A+RF GSN +E++ N+ YI+ DGC + G ++TVL++D P + +
Sbjct 1636 GWLDGSTRSYTHALRFRGSNGDELTQRNTHYIQPTHDGCQWRSGQERTVLQLDAPLPDVL 1695
Query 130 PIVDIMFNDFGEASQKFGFEVGPACFLG 157
P++D+ +DFG QKFGF VG CF G
Sbjct 1696 PLLDVSVSDFGSLKQKFGFSVGQVCFSG 1723
> hsa:50509 COL5A3; collagen, type V, alpha 3; K06236 collagen,
type I/II/III/V/XI, alpha
Length=1745
Score = 161 bits (407), Expect = 9e-40, Method: Composition-based stats.
Identities = 73/148 (49%), Positives = 100/148 (67%), Gaps = 2/148 (1%)
Query 10 KMARWPKEQPSTWYSQYKRGSLLSYVDAEGNPVGVVQMTFLRLLSASAHQNITYNCYQSV 69
K+A W KE+P WYS ++RG SYVDA+G+PV VVQ+ FL+LLSA+A QN TY+C +
Sbjct 1596 KLASWSKEKPGGWYSTFRRGKKFSYVDADGSPVNVVQLNFLKLLSATARQNFTYSCQNAA 1655
Query 70 AWQDAATGSYDKAMRFLGSNDEEMSYDNSPYIRALV--DGCATKKGYQKTVLEIDTPKVE 127
AW D ATG Y + RFLG+N EE+S++ + V DGC +KG KT+ E + +
Sbjct 1656 AWLDEATGDYSHSARFLGTNGEELSFNQTTAATVSVPQDGCRLRKGQTKTLFEFSSSRAG 1715
Query 128 QVPIVDIMFNDFGEASQKFGFEVGPACF 155
+P+ D+ DFG+ +QKFGFE+GP CF
Sbjct 1716 FLPLWDVAATDFGQTNQKFGFELGPVCF 1743
> mmu:53867 Col5a3; collagen, type V, alpha 3; K06236 collagen,
type I/II/III/V/XI, alpha
Length=1739
Score = 150 bits (380), Expect = 1e-36, Method: Composition-based stats.
Identities = 72/148 (48%), Positives = 101/148 (68%), Gaps = 3/148 (2%)
Query 10 KMARWPKEQPSTWYSQYKRGSLLSYVDAEGNPVGVVQMTFLRLLSASAHQNITYNCYQSV 69
K+A W +E+P WYS ++RG SYVDA+G+PV VVQ+TFL+LLSA+AHQ TY C SV
Sbjct 1591 KLASWSREKPGGWYSTFRRGKKFSYVDADGSPVNVVQLTFLKLLSAAAHQRFTYICQNSV 1650
Query 70 AWQDAATGSYDKAMRFLGSNDEEMSYDNS--PYIRALVDGCATKKGYQKTVLEIDTPKVE 127
AW D A G + ++RF G+N EE+S++ + I+ DGC +KG KT+ E + V
Sbjct 1651 AWLDEAAGDHRHSIRFQGTNWEELSFNQTTAATIKVSHDGCRVRKGQAKTLFEFSS-SVG 1709
Query 128 QVPIVDIMFNDFGEASQKFGFEVGPACF 155
+P+ D+ +DFG+ +QKFGFE+G CF
Sbjct 1710 FLPLWDVAASDFGQTNQKFGFELGSICF 1737
> mmu:12815 Col11a2; collagen, type XI, alpha 2; K06236 collagen,
type I/II/III/V/XI, alpha
Length=1650
Score = 122 bits (305), Expect = 6e-28, Method: Composition-based stats.
Identities = 58/126 (46%), Positives = 87/126 (69%), Gaps = 11/126 (8%)
Query 32 LSYVDAEGNPVGVVQMTFLRLLSASAHQNITYNCYQSVAWQDAATGSYDKAMRFLGSNDE 91
SYVD+EG+PVGVVQ+TFLRLLS SAHQ+++Y C + S D ++ G+N++
Sbjct 1536 FSYVDSEGSPVGVVQLTFLRLLSVSAHQDVSYPC---------SGVSQDGPLKLRGANED 1586
Query 92 EMSYDNSPYIRALVDGCATKKGYQKTVLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVG 151
E+S + SPY++ DGC T++G +TVLE+ TP +EQ+P++D F D G +++ G +G
Sbjct 1587 ELSPETSPYVKEFRDGCQTQQG--RTVLEVRTPVLEQLPVLDASFADLGAPTRRGGVLLG 1644
Query 152 PACFLG 157
P CF+G
Sbjct 1645 PVCFMG 1650
> xla:397738 col2a1, MGC132344, col2a1a; collagen, type II, alpha
1; K06236 collagen, type I/II/III/V/XI, alpha
Length=1486
Score = 109 bits (272), Expect = 4e-24, Method: Composition-based stats.
Identities = 66/146 (45%), Positives = 86/146 (58%), Gaps = 5/146 (3%)
Query 16 KEQPSTWYSQYKRGSL-LSYVDAEGNP-VGVVQMTFLRLLSASAHQNITYNCYQSVAWQD 73
KE+ W+ + G SY D P +QMTFLRLLS A QNITY+C S+A+ D
Sbjct 1341 KEKKHIWFGETINGGFQFSYGDDSSAPNTANIQMTFLRLLSTDASQNITYHCKNSIAFMD 1400
Query 74 AATGSYDKAMRFLGSNDEEMSYD-NSPYI-RALVDGCATKKG-YQKTVLEIDTPKVEQVP 130
A+G+ KA+ GSND E+ + NS + AL DGC G + KTV+E T K ++P
Sbjct 1401 EASGNLKKAVLLQGSNDVEIRAEGNSRFTYNALEDGCKKHTGKWSKTVIEYRTQKTSRLP 1460
Query 131 IVDIMFNDFGEASQKFGFEVGPACFL 156
IVDI D G A Q+FG ++GP CFL
Sbjct 1461 IVDIAPMDIGGADQEFGVDIGPVCFL 1486
> xla:397739 col2a1b; collagen, type II, alpha 1; K06236 collagen,
type I/II/III/V/XI, alpha
Length=1491
Score = 107 bits (268), Expect = 1e-23, Method: Composition-based stats.
Identities = 65/146 (44%), Positives = 86/146 (58%), Gaps = 5/146 (3%)
Query 16 KEQPSTWYSQYKRGSL-LSYVDAEGNP-VGVVQMTFLRLLSASAHQNITYNCYQSVAWQD 73
KE+ W+ + G SY D P +Q+TFLRLLS A QNITY+C S+A+ D
Sbjct 1346 KEKKHIWFGETINGGFQFSYGDDSSAPNTANIQLTFLRLLSTDASQNITYHCKNSIAFMD 1405
Query 74 AATGSYDKAMRFLGSNDEEMSYD-NSPYI-RALVDGCATKKG-YQKTVLEIDTPKVEQVP 130
A+G+ KA+ GSND E+ + NS + AL DGC G + KTV+E T K ++P
Sbjct 1406 EASGNLKKAVLLQGSNDVEIRAEGNSRFTYNALEDGCKKHTGKWSKTVIEYRTQKTSRLP 1465
Query 131 IVDIMFNDFGEASQKFGFEVGPACFL 156
IVDI D G A Q+FG ++GP CFL
Sbjct 1466 IVDIAPMDIGGADQEFGVDIGPVCFL 1491
> mmu:12824 Col2a1, Col2, Col2a, Col2a-1, Del1, Dmm, MGC90638;
collagen, type II, alpha 1; K06236 collagen, type I/II/III/V/XI,
alpha
Length=1419
Score = 107 bits (267), Expect = 2e-23, Method: Composition-based stats.
Identities = 65/146 (44%), Positives = 84/146 (57%), Gaps = 5/146 (3%)
Query 16 KEQPSTWYSQYKRGSL-LSYVDAEGNP-VGVVQMTFLRLLSASAHQNITYNCYQSVAWQD 73
KE+ W+ + G SY D P VQMTFLRLLS QNITY+C S+A+ D
Sbjct 1274 KEKKHIWFGETMNGGFHFSYGDGNLAPNTANVQMTFLRLLSTEGSQNITYHCKNSIAYLD 1333
Query 74 AATGSYDKAMRFLGSNDEEMSYD-NSPYI-RALVDGCATKKG-YQKTVLEIDTPKVEQVP 130
A G+ KA+ GSND EM + NS + AL DGC G + KTV+E + K ++P
Sbjct 1334 EAAGNLKKALLIQGSNDVEMRAEGNSRFTYTALKDGCTKHTGKWGKTVIEYRSQKTSRLP 1393
Query 131 IVDIMFNDFGEASQKFGFEVGPACFL 156
I+DI D G A Q+FG ++GP CFL
Sbjct 1394 IIDIAPMDIGGAEQEFGVDIGPVCFL 1419
> mmu:12842 Col1a1, Col1a-1, Cola-1, Cola1, Mov-13, Mov13; collagen,
type I, alpha 1; K06236 collagen, type I/II/III/V/XI,
alpha
Length=1453
Score = 105 bits (263), Expect = 4e-23, Method: Composition-based stats.
Identities = 61/147 (41%), Positives = 88/147 (59%), Gaps = 5/147 (3%)
Query 15 PKEQPSTWYSQ-YKRGSLLSYVDAEGNPVGV-VQMTFLRLLSASAHQNITYNCYQSVAWQ 72
PKE+ W+ + G Y +P V +Q+TFLRL+S A QNITY+C SVA+
Sbjct 1307 PKEKKHVWFGESMTDGFPFEYGSEGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYM 1366
Query 73 DAATGSYDKAMRFLGSNDEEMSYD-NSPYIRA-LVDGCATKKG-YQKTVLEIDTPKVEQV 129
D TG+ KA+ GSN+ E+ + NS + + LVDGC + G + KTV+E T K ++
Sbjct 1367 DQQTGNLKKALLLQGSNEIELRGEGNSRFTYSTLVDGCTSHTGTWGKTVIEYKTTKTSRL 1426
Query 130 PIVDIMFNDFGEASQKFGFEVGPACFL 156
PI+D+ D G Q+FG ++GPACF+
Sbjct 1427 PIIDVAPLDIGAPDQEFGLDIGPACFV 1453
> hsa:1277 COL1A1, OI4; collagen, type I, alpha 1; K06236 collagen,
type I/II/III/V/XI, alpha
Length=1464
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 76/116 (65%), Gaps = 3/116 (2%)
Query 44 VVQMTFLRLLSASAHQNITYNCYQSVAWQDAATGSYDKAMRFLGSNDEEMSYD-NSPYIR 102
+Q+TFLRL+S A QNITY+C SVA+ D TG+ KA+ GSN+ E+ + NS +
Sbjct 1349 AIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTGNLKKALLLQGSNEIEIRAEGNSRFTY 1408
Query 103 AL-VDGCATKKG-YQKTVLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFL 156
++ VDGC + G + KTV+E T K ++PI+D+ D G Q+FGF+VGP CFL
Sbjct 1409 SVTVDGCTSHTGAWGKTVIEYKTTKTSRLPIIDVAPLDVGAPDQEFGFDVGPVCFL 1464
> dre:562496 col2a1a, col2a1, coll2a1, fb38c06, fc10c01, wu:fb38c06,
wu:fc10c01; collagen type II, alpha-1a; K06236 collagen,
type I/II/III/V/XI, alpha
Length=1491
Score = 102 bits (255), Expect = 4e-22, Method: Composition-based stats.
Identities = 61/146 (41%), Positives = 82/146 (56%), Gaps = 5/146 (3%)
Query 16 KEQPSTWYSQYKRGSL-LSYVDAEGNP-VGVVQMTFLRLLSASAHQNITYNCYQSVAWQD 73
K Q W+ + G SY D P +Q+ FLRLLS A Q ITY+C SVA+ D
Sbjct 1346 KAQKHVWFGESMNGGFHFSYADGSQTPSTTTIQLNFLRLLSTEATQTITYHCKNSVAYMD 1405
Query 74 AATGSYDKAMRFLGSNDEEMSYD-NSPYIRALV-DGCATKKG-YQKTVLEIDTPKVEQVP 130
ATG+ KA+ GSND E+ + NS + ++ DGC G + KTV+E T K ++P
Sbjct 1406 QATGNLKKAILLQGSNDVEIRAEGNSRFTYGVLEDGCKKHTGQWAKTVIEYKTQKTSRLP 1465
Query 131 IVDIMFNDFGEASQKFGFEVGPACFL 156
I+DI D G A Q+FG ++G CFL
Sbjct 1466 IMDIAPMDIGGADQEFGVDIGAVCFL 1491
> hsa:1280 COL2A1, ANFH, AOM, COL11A3, MGC131516, SEDC; collagen,
type II, alpha 1; K06236 collagen, type I/II/III/V/XI, alpha
Length=1487
Score = 102 bits (254), Expect = 5e-22, Method: Composition-based stats.
Identities = 63/146 (43%), Positives = 83/146 (56%), Gaps = 5/146 (3%)
Query 16 KEQPSTWYSQYKRGSL-LSYVDAEGNP-VGVVQMTFLRLLSASAHQNITYNCYQSVAWQD 73
KE+ W+ + G SY D P VQMTFLRLLS QNITY+C S+A+ D
Sbjct 1342 KEKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRLLSTEGSQNITYHCKNSIAYLD 1401
Query 74 AATGSYDKAMRFLGSNDEEMSYD-NSPYI-RALVDGCATKKG-YQKTVLEIDTPKVEQVP 130
A G+ KA+ GSND E+ + NS + AL DGC G + KTV+E + K ++P
Sbjct 1402 EAAGNLKKALLIQGSNDVEIRAEGNSRFTYTALKDGCTKHTGKWGKTVIEYRSQKTSRLP 1461
Query 131 IVDIMFNDFGEASQKFGFEVGPACFL 156
I+DI D G Q+FG ++GP CFL
Sbjct 1462 IIDIAPMDIGGPEQEFGVDIGPVCFL 1487
> hsa:1281 COL3A1, EDS4A, FLJ34534; collagen, type III, alpha
1; K06236 collagen, type I/II/III/V/XI, alpha
Length=1466
Score = 102 bits (253), Expect = 7e-22, Method: Composition-based stats.
Identities = 64/149 (42%), Positives = 85/149 (57%), Gaps = 13/149 (8%)
Query 17 EQPSTWYSQYKRGSL-LSYVDAEGNP-----VGVVQMTFLRLLSASAHQNITYNCYQSVA 70
E+ W+ + G SY GNP V VQ+ FLRLLS+ A QNITY+C S+A
Sbjct 1322 EKKHVWFGESMDGGFQFSY----GNPELPEDVLDVQLAFLRLLSSRASQNITYHCKNSIA 1377
Query 71 WQDAATGSYDKAMRFLGSNDEEMSYD-NSPYI-RALVDGCATKKG-YQKTVLEIDTPKVE 127
+ D A+G+ KA++ +GSN+ E + NS + L DGC G + KTV E T K
Sbjct 1378 YMDQASGNVKKALKLMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWSKTVFEYRTRKAV 1437
Query 128 QVPIVDIMFNDFGEASQKFGFEVGPACFL 156
++PIVDI D G Q+FG +VGP CFL
Sbjct 1438 RLPIVDIAPYDIGGPDQEFGVDVGPVCFL 1466
> dre:337158 col1a1a, alpha1(I), cb21, col1a1, sb:cb21, sb:cb384,
wu:fa99c12, wu:fb02c06; collagen, type I, alpha 1a; K06236
collagen, type I/II/III/V/XI, alpha
Length=1447
Score = 101 bits (251), Expect = 1e-21, Method: Composition-based stats.
Identities = 59/146 (40%), Positives = 86/146 (58%), Gaps = 5/146 (3%)
Query 16 KEQPSTWYSQ-YKRGSLLSYVDAEGNPVGV-VQMTFLRLLSASAHQNITYNCYQSVAWQD 73
KE+ W+ + G Y P V +Q+TFLRL+S A QNITY+C S+A+ D
Sbjct 1302 KEKKHVWFGEAMTDGFQFEYGSEGSKPEDVNIQLTFLRLMSTEASQNITYHCKNSIAYMD 1361
Query 74 AATGSYDKAMRFLGSNDEEMSYD-NSPYIRALV-DGCATKKG-YQKTVLEIDTPKVEQVP 130
A+G+ KA+ GSN+ E+ + NS + ++ DGC + G + KTV++ T K ++P
Sbjct 1362 QASGNLKKALLLQGSNEIEIRAEGNSRFTYSVTEDGCTSHTGAWGKTVIDYKTTKTSRLP 1421
Query 131 IVDIMFNDFGEASQKFGFEVGPACFL 156
I+DI D G +Q+FG EVGP CFL
Sbjct 1422 IIDIAPMDVGAPNQEFGIEVGPVCFL 1447
> dre:336471 col1a2, alpha2(I), hm:zehn2357, wu:fa98d05, wu:fa99g10,
wu:fb04c08, wu:fb11d06, zehn2357; collagen, type I, alpha
2; K06236 collagen, type I/II/III/V/XI, alpha
Length=1352
Score = 100 bits (248), Expect = 3e-21, Method: Composition-based stats.
Identities = 61/158 (38%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query 3 PFRILQSKMARWPKEQPSTWYSQ-YKRGSLLSYVDAEGNPVGV-VQMTFLRLLSASAHQN 60
P I + R +E+ TW+ + G+ +Y D +P + Q+ F+RLL+ A QN
Sbjct 1194 PESIPRKNWYRSSQEKKHTWFGETINSGTEFAYNDETLSPQSMATQLAFMRLLANQAVQN 1253
Query 61 ITYNCYQSVAWQDAATGSYDKAMRFLGSNDEEMSYD-NSPY-IRALVDGCATKKG-YQKT 117
ITY+C S+A+ DA G+ KA+ GSND E+ + NS + L DGC+ G + KT
Sbjct 1254 ITYHCKNSIAYMDAENGNLKKAVLLQGSNDVELRAEGNSRFTFSVLEDGCSRHTGQWSKT 1313
Query 118 VLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACF 155
V+E T K ++PI+DI D G A Q+FG ++GP CF
Sbjct 1314 VIEYRTNKPSRLPILDIAPLDIGGADQEFGLDIGPVCF 1351
> xla:398983 col3a1, MGC69046; collagen, type III, alpha 1 (Ehlers-Danlos
syndrome type IV, autosomal dominant); K06236 collagen,
type I/II/III/V/XI, alpha
Length=1464
Score = 99.8 bits (247), Expect = 3e-21, Method: Composition-based stats.
Identities = 58/140 (41%), Positives = 82/140 (58%), Gaps = 5/140 (3%)
Query 22 WYSQYKRGSL-LSYVDAE-GNPVGVVQMTFLRLLSASAHQNITYNCYQSVAWQDAATGSY 79
W+ + G SY DAE V VQM+F+R+LS+ A QNITY+C S+A+ D G+
Sbjct 1325 WFGESMNGGFQFSYGDAELPEDVSEVQMSFIRILSSRASQNITYHCKNSIAYMDGENGNV 1384
Query 80 DKAMRFLGSNDEEMSYD-NSPYI-RALVDGCATKKG-YQKTVLEIDTPKVEQVPIVDIMF 136
K+++F+ S + E+ + NS + L DGC G + KTV E T K ++PI+DI
Sbjct 1385 KKSLKFMSSTESEIKAEGNSKFTYTVLEDGCTKHTGEWGKTVFEYRTRKAMRLPIIDIAP 1444
Query 137 NDFGEASQKFGFEVGPACFL 156
D G Q+FG +VGP CFL
Sbjct 1445 MDVGGPDQEFGVDVGPVCFL 1464
> mmu:12825 Col3a1, AW550625, Col3a-1, KIAA4231, MMS10-W, Ms10w,
mKIAA4231; collagen, type III, alpha 1; K06236 collagen,
type I/II/III/V/XI, alpha
Length=1464
Score = 99.0 bits (245), Expect = 6e-21, Method: Composition-based stats.
Identities = 57/145 (39%), Positives = 81/145 (55%), Gaps = 5/145 (3%)
Query 17 EQPSTWYSQYKRGSLLSYVDAEGNPVGVV--QMTFLRLLSASAHQNITYNCYQSVAWQDA 74
E+ W+ + G P VV Q+ FLRLLS+ A QNITY+C S+A+ D
Sbjct 1320 EKKHVWFGESMNGGFQFSYGPPDLPEDVVDVQLAFLRLLSSRASQNITYHCKNSIAYMDQ 1379
Query 75 ATGSYDKAMRFLGSNDEEMSYD-NSPYI-RALVDGCATKKG-YQKTVLEIDTPKVEQVPI 131
A+G+ K+++ +GSN+ E + NS + L DGC G + KTV E T K ++PI
Sbjct 1380 ASGNVKKSLKLMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWSKTVFEYQTRKAMRLPI 1439
Query 132 VDIMFNDFGEASQKFGFEVGPACFL 156
+DI D G Q+FG ++GP CFL
Sbjct 1440 IDIAPYDIGGPDQEFGVDIGPVCFL 1464
> dre:100333692 Col2a1-like
Length=838
Score = 98.6 bits (244), Expect = 7e-21, Method: Composition-based stats.
Identities = 57/140 (40%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Query 22 WYSQYKRGSL-LSYVDAEGNP-VGVVQMTFLRLLSASAHQNITYNCYQSVAWQDAATGSY 79
W+ + G +Y D +P +QMTFLRLLS A QN+TY+C S+A+ D ++G+
Sbjct 699 WFGEAMNGGFHFNYGDENLSPNTASIQMTFLRLLSTEASQNLTYHCRNSIAYMDESSGNL 758
Query 80 DKAMRFLGSNDEEMSYD-NSPYIRALV-DGCATKKG-YQKTVLEIDTPKVEQVPIVDIMF 136
KA+ GSND E+ + NS + +++ DGC G + KTV+E + K ++P+VDI
Sbjct 759 KKALLLRGSNDVEIRAEGNSRFTYSVLEDGCKKHTGQWSKTVIEYKSQKTSRLPLVDIAP 818
Query 137 NDFGEASQKFGFEVGPACFL 156
D G A Q+FG +VG CFL
Sbjct 819 VDIGGAHQEFGVDVGAVCFL 838
> mmu:12832 Col5a2, 1110014L14Rik, D230017N05; collagen, type
V, alpha 2; K06236 collagen, type I/II/III/V/XI, alpha
Length=1497
Score = 98.6 bits (244), Expect = 8e-21, Method: Composition-based stats.
Identities = 56/149 (37%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query 12 ARWPKEQPSTWYS-QYKRGSLLSYVDAEGNPVGVVQMTFLRLLSASAHQNITYNCYQSVA 70
++ P +P WY RGS +Y D + + QMTFLRLLS A QN+TY C +V
Sbjct 1350 SKSPDNKP-VWYGLDMNRGSQFTYGDYQSPNTAITQMTFLRLLSKEASQNLTYICRNTVG 1408
Query 71 WQDAATGSYDKAMRFLGSNDEEMSYDNSPYIR--ALVDGCATKKG-YQKTVLEIDTPKVE 127
+ D + KA+ GSND E+ + + R L D C+ + G KT+ E T V
Sbjct 1409 YMDDQAKNLKKAVVLKGSNDLEIKGEGNIRFRYTVLQDTCSKRNGNVGKTIFEYRTQNVA 1468
Query 128 QVPIVDIMFNDFGEASQKFGFEVGPACFL 156
++PI+D+ D G A Q+FG ++GP CF+
Sbjct 1469 RLPIIDVGPVDIGNADQEFGLDIGPVCFM 1497
> hsa:1290 COL5A2, MGC105115; collagen, type V, alpha 2; K06236
collagen, type I/II/III/V/XI, alpha
Length=1499
Score = 97.8 bits (242), Expect = 1e-20, Method: Composition-based stats.
Identities = 57/149 (38%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query 12 ARWPKEQPSTWYS-QYKRGSLLSYVDAEGNPVGVVQMTFLRLLSASAHQNITYNCYQSVA 70
++ P +P WY RGS +Y D + + QMTFLRLLS A QNITY C SV
Sbjct 1352 SKSPDNKP-VWYGLDMNRGSQFAYGDHQSPNTAITQMTFLRLLSKEASQNITYICKNSVG 1410
Query 71 WQDAATGSYDKAMRFLGSNDEEMSYDNSPYIRALV--DGCATKKG-YQKTVLEIDTPKVE 127
+ D + KA+ G+ND ++ + + R +V D C+ + G KTV E T V
Sbjct 1411 YMDDQAKNLKKAVVLKGANDLDIKAEGNIRFRYIVLQDTCSKRNGNVGKTVFEYRTQNVA 1470
Query 128 QVPIVDIMFNDFGEASQKFGFEVGPACFL 156
++PI+D+ D G Q+FG E+GP CF+
Sbjct 1471 RLPIIDLAPVDVGGTDQEFGVEIGPVCFV 1499
> xla:380515 col1a1, MGC52532; collagen, type I, alpha 1; K06236
collagen, type I/II/III/V/XI, alpha
Length=1449
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 74/116 (63%), Gaps = 3/116 (2%)
Query 44 VVQMTFLRLLSASAHQNITYNCYQSVAWQDAATGSYDKAMRFLGSNDEEMSYD-NSPYIR 102
+Q+TFLRL++ A QNITY+C SVA+ D ATG+ KA+ GSN+ E+ + NS +
Sbjct 1334 TIQLTFLRLMATEASQNITYHCKNSVAYMDQATGNLKKALLLQGSNEIEIRAEGNSRFTY 1393
Query 103 ALV-DGCATKKG-YQKTVLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFL 156
++V DGC G + KTV++ T K ++PI D+ D G Q+FG ++GP CF+
Sbjct 1394 SVVEDGCTQHTGEWGKTVIDYKTTKTSRLPITDVAPMDIGAPDQEFGIDIGPVCFV 1449
> dre:325675 col1a1b, alpha3(I), col1a3, hm:zeh0348, wu:fa95h05,
wu:fd02a10, wu:fj59a10; collagen, type I, alpha 1b; K06236
collagen, type I/II/III/V/XI, alpha
Length=1449
Score = 97.1 bits (240), Expect = 2e-20, Method: Composition-based stats.
Identities = 57/146 (39%), Positives = 83/146 (56%), Gaps = 5/146 (3%)
Query 16 KEQPSTWYSQ-YKRGSLLSYVDAEGNPVGV-VQMTFLRLLSASAHQNITYNCYQSVAWQD 73
+E+ W+ + G Y +P V +Q+TF+RL+S QNITY+C S+A+ D
Sbjct 1304 REKKHVWFGESMPNGFQFQYGSDGSDPEDVNIQLTFMRLMSNQGSQNITYHCKNSIAYMD 1363
Query 74 AATGSYDKAMRFLGSNDEEMSYD-NSPYI-RALVDGCATKKG-YQKTVLEIDTPKVEQVP 130
+G+ KA+ GSND E+ + NS + R DGC + G + KTV++ T K ++P
Sbjct 1364 ETSGNLKKALLLQGSNDIEIRAEGNSRFTYRVSEDGCTSHTGTWGKTVIDYKTTKTSRLP 1423
Query 131 IVDIMFNDFGEASQKFGFEVGPACFL 156
I+DI D G Q+FG EVGP CFL
Sbjct 1424 IIDIAPMDIGAPDQEFGVEVGPVCFL 1449
> dre:564821 col5a2l, COL5A2, im:7038599, si:by143e18.1, si:dz167c3.3,
wu:fa13f03, wu:fa98d01, wu:fj05e03; collagen, type
V, alpha 2-like; K06236 collagen, type I/II/III/V/XI, alpha
Length=1491
Score = 96.3 bits (238), Expect = 4e-20, Method: Composition-based stats.
Identities = 58/147 (39%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Query 15 PKEQPSTWYSQYKRGSLLSY--VDAEGNPVGVVQMTFLRLLSASAHQNITYNCYQSVAWQ 72
P +P + + G+ +Y D N V VQMTF+RLLS A Q ITY+C +V ++
Sbjct 1346 PGNKPVWFGANMNGGTYFTYGNKDQPANTV-TVQMTFIRLLSKEASQTITYHCKNTVGYK 1404
Query 73 DAATGSYDKAMRFLGSNDEEMSYDNSPYIR--ALVDGCATKKG-YQKTVLEIDTPKVEQV 129
D +TG+ KA+ SND E+ + + R L D C+ G + KTV E T K ++
Sbjct 1405 DESTGNLKKAVILKASNDLELKAEGNNRFRYTVLEDSCSQANGNWGKTVFEYRTQKTARL 1464
Query 130 PIVDIMFNDFGEASQKFGFEVGPACFL 156
PIVDI D G + Q+FG ++GP CFL
Sbjct 1465 PIVDIAPVDIGGSDQEFGIDIGPVCFL 1491
> mmu:12843 Col1a2, AA960264, AI325291, Col1a-2, Cola-2, Cola2,
oim; collagen, type I, alpha 2; K06236 collagen, type I/II/III/V/XI,
alpha
Length=1372
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 71/115 (61%), Gaps = 3/115 (2%)
Query 44 VVQMTFLRLLSASAHQNITYNCYQSVAWQDAATGSYDKAMRFLGSNDEEM-SYDNSPYI- 101
Q+ F+RLL+ A QNITY+C S+A+ D TGS +KA+ GSND E+ + NS +
Sbjct 1257 ATQLAFMRLLANRASQNITYHCKNSIAYLDEETGSLNKAVLLQGSNDVELVAEGNSRFTY 1316
Query 102 RALVDGCATKKG-YQKTVLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACF 155
LVDGC+ K + KT++E T K ++P +DI D G A Q+F EVGP CF
Sbjct 1317 SVLVDGCSKKTNEWGKTIIEYKTNKPSRLPFLDIAPLDIGGADQEFRVEVGPVCF 1371
> hsa:1278 COL1A2, OI4; collagen, type I, alpha 2; K06236 collagen,
type I/II/III/V/XI, alpha
Length=1366
Score = 89.4 bits (220), Expect = 5e-18, Method: Composition-based stats.
Identities = 58/159 (36%), Positives = 85/159 (53%), Gaps = 5/159 (3%)
Query 2 RPFRILQSKMARWPKEQPSTWYSQ-YKRGSLLSY-VDAEGNPVGVVQMTFLRLLSASAHQ 59
+P I R K++ W + GS Y V+ + Q+ F+RLL+ A Q
Sbjct 1207 QPENIPAKNWYRSSKDKKHVWLGETINAGSQFEYNVEGVTSKEMATQLAFMRLLANYASQ 1266
Query 60 NITYNCYQSVAWQDAATGSYDKAMRFLGSNDEEMSYD-NSPYI-RALVDGCATKKG-YQK 116
NITY+C S+A+ D TG+ KA+ GSND E+ + NS + LVDGC+ K + K
Sbjct 1267 NITYHCKNSIAYMDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSKKTNEWGK 1326
Query 117 TVLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACF 155
T++E T K ++P +DI D G A Q+F ++GP CF
Sbjct 1327 TIIEYKTNKPSRLPFLDIAPLDIGGADQEFFVDIGPVCF 1365
> xla:380419 col1a2, MGC52958; collagen, type 1, alpha 2; K06236
collagen, type I/II/III/V/XI, alpha
Length=1346
Score = 85.9 bits (211), Expect = 5e-17, Method: Composition-based stats.
Identities = 48/113 (42%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query 46 QMTFLRLLSASAHQNITYNCYQSVAWQDAATGSYDKAMRFLGSNDEEMSYD-NSPY-IRA 103
Q F+RLL+ A QNITY+C S+A+ D TG+ KA+ GSND E+ + NS +
Sbjct 1233 QFAFMRLLANHASQNITYHCKNSIAYMDGQTGNLKKAILLQGSNDVELRAEGNSRFTFSV 1292
Query 104 LVDGCATKKG-YQKTVLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACF 155
L D C G + +TV+E T K ++PI+DI D G Q+FG ++GP CF
Sbjct 1293 LEDSCTQHTGEWGRTVIEYRTNKPSRLPILDIAPLDIGGDDQEFGLDIGPVCF 1345
> dre:100006366 procollagen, type V, alpha 2-like
Length=1432
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/143 (34%), Positives = 80/143 (55%), Gaps = 5/143 (3%)
Query 18 QPSTWY-SQYKRGSLLSYVDAEGNPVGV-VQMTFLRLLSASAHQNITYNCYQSVAWQDAA 75
Q W+ + RG+ +Y + E + V VQ+ FLRLLS A Q++TY+C +VA++D
Sbjct 1289 QKPVWFGATMNRGTKFTYGNKEASANAVSVQLRFLRLLSKEASQSVTYHCKNTVAYKDEK 1348
Query 76 TGSYDKAMRFLGSNDEEMSYDNSPYIRALV--DGCATKKG-YQKTVLEIDTPKVEQVPIV 132
+ KA+ S+ +++ NS ++ V DGC+ G + +TV E T + ++PIV
Sbjct 1349 NSNLKKALILKASDGQDIKAYNSNRLKYTVTADGCSKPNGEWGRTVFEYRTQTLSRLPIV 1408
Query 133 DIMFNDFGEASQKFGFEVGPACF 155
D+ D G Q+FG ++G CF
Sbjct 1409 DLAAVDVGGRDQEFGIDIGHVCF 1431
> mmu:373864 Col27a1, 5730512J02Rik, AI449266, mKIAA1870; collagen,
type XXVII, alpha 1
Length=1845
Score = 60.1 bits (144), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query 42 VGVVQMTFLRLLSASAHQNITYNCYQSVAWQDA-ATGSYDKAMRFLGSNDEEMSYDNSPY 100
V VQM FL LLS+ Q+IT +C WQ+ S +A+RF N +
Sbjct 1729 VSRVQMNFLHLLSSEGTQHITIHCLNMTVWQEGPGRSSARQAVRFRAWNGQVFEAGGQFR 1788
Query 101 IRALVDGCATKKG-YQKTVLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFL 156
+DGC G + +T+ T +Q+PIV + + +++ EVGPACFL
Sbjct 1789 PEVSMDGCKVHDGRWHQTLFTFRTQDPQQLPIVSVDNLPPVSSGKQYRLEVGPACFL 1845
> hsa:85301 COL27A1, FLJ11895, KIAA1870, MGC11337; collagen, type
XXVII, alpha 1
Length=1860
Score = 59.7 bits (143), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Query 45 VQMTFLRLLSASAHQNITYNCYQSVAWQDAATGSYDK-AMRFLGSNDEEMSYDNSPYIRA 103
VQM FL LLS+ Q+IT +C WQ+ + K A+RF N +
Sbjct 1747 VQMNFLHLLSSEVTQHITIHCLNMTVWQEGTGQTPAKQAVRFRAWNGQIFEAGGQFRPEV 1806
Query 104 LVDGCATKKG-YQKTVLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFL 156
+DGC + G + +T+ T +Q+PI+ + + +++ EVGPACFL
Sbjct 1807 SMDGCKVQDGRWHQTLFTFRTQDPQQLPIISVDNLPPASSGKQYRLEVGPACFL 1860
> dre:564099 novel collagen protein-like
Length=1733
Score = 55.5 bits (132), Expect = 7e-08, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 23/137 (16%)
Query 22 WYSQYKRGSLLSYVDAEGNPVGVVQMTFLRLLSASAHQNITYNCYQSVAWQDAATGSYDK 81
W S + G Y + VVQ+ FLRL S A Q +TY+CY G +
Sbjct 1616 WLSSLEGGFKFEY-----PALSVVQLRFLRLQSNRAEQRVTYSCYPG-----HRLGETQR 1665
Query 82 AMRFLGSNDEEMSYDNSPYIRALVDGCATKK---GYQKTVLEIDTPKVEQVPIVDIMFND 138
++FL ++ Y+ AL D + K+ G +++V + + ++ +P+ DI
Sbjct 1666 QVQFLTDAAKQ------SYLGALQDCVSAKEVDPGPRESVFQFE--DMDLLPLRDIGI-- 1715
Query 139 FGEASQKFGFEVGPACF 155
FG +SQ+FGF +GP CF
Sbjct 1716 FGNSSQEFGFTIGPVCF 1732
> dre:100004431 si:dkey-61l1.4
Length=1808
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query 8 QSKMARWPKEQPS---TWYSQYKRGSLLSYVDAEGNPVGVVQMTFLRLLSASAHQNITYN 64
Q + W K+ S TW S G Y + VVQM FLRL S QNIT++
Sbjct 1670 QMPIRSWLKDGTSDSFTWLSTIDGGFQFDYTETS-----VVQMRFLRLNSRIVKQNITFS 1724
Query 65 CYQSVAWQDAATGSYDKAMRFLGSNDEEMSYDNSPYIRALVD---GCATKKGYQKTVLEI 121
C QS + Q G ++ ++FL + + ++ L+D G +++V +
Sbjct 1725 C-QSNSHQ----GFNERDIKFLADSRRQ------SFLGTLLDCEPSGPLDSGPRESVFQF 1773
Query 122 DTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACF 155
+T ++ +PI D+ E +++F F VG CF
Sbjct 1774 ETEDLDLLPIRDLALFGHRETAEEFWFTVGDVCF 1807
> hsa:255631 COL24A1, MGC142214; collagen, type XXIV, alpha 1
Length=1714
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Query 42 VGVVQMTFLRLLSASAHQNITYNCYQSVAWQDAATGSYDKAMRFLGSNDEEMSYDNSPYI 101
VG VQM FL LLS+ A IT +C + W T + F G N + +
Sbjct 1599 VGKVQMNFLHLLSSEATHIITIHCLNTPRWTSTQTSGPGLPIGFKGWNGQIFKVNTLLEP 1658
Query 102 RALVDGCATKKG-YQKTVLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFL 156
+ L D C + G + K T + Q+P++++ + +K+ + CFL
Sbjct 1659 KVLSDDCKIQDGSWHKATFLFHTQEPNQLPVIEVQKLPHLKTERKYYIDSSSVCFL 1714
> dre:100004688 col27a1a, sb:cb221; collagen, type XXVII, alpha
1a
Length=1783
Score = 44.3 bits (103), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 48/117 (41%), Gaps = 8/117 (6%)
Query 42 VGVVQMTFLRLLSASAHQNITYNCYQSVAWQDAATGSYDK-AMRFLGSNDEEMSYDNSPY 100
VG VQM FL LLSA A Q IT +C W A + A++F E + D
Sbjct 1673 VGRVQMNFLHLLSAGAEQRITIHCLNVTIWSHAPNQPPSQNAVQFHSWIGEVLEPD---- 1728
Query 101 IRALVDGCATKKG-YQKTVLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFL 156
L D C G +Q +P+V I S +F EVGP CFL
Sbjct 1729 --VLEDTCWQLNGRWQHADFLFRVLDPALLPVVRISNLPKVMPSSRFHLEVGPVCFL 1783
> dre:560145 col27a1b, col27a1; collagen, type XXVII, alpha 1b
Length=1658
Score = 43.9 bits (102), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query 42 VGVVQMTFLRLLSASAHQNITYNCYQSVAWQDAATGSYDKAMRFLGSNDEEMSYDNSPYI 101
V ++QM F+ LLS+ A Q IT +C W + + +M + + D ++ + +I
Sbjct 1542 VSLIQMNFIHLLSSEAVQIITVHCLNVSVWASEDSKTPSSSMVYFKAWDGQI-IEAGGFI 1600
Query 102 RA--LVDGCATKKG-YQKTVLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFL 156
L D C G + +T T +PIV+I + + EVGP CFL
Sbjct 1601 EPDLLKDECWITDGRWHQTQFIFRTQDPNLLPIVEIYNLPSTKPGSHYHLEVGPVCFL 1658
> mmu:71355 Col24a1, 5430404K19Rik, MGC107332; collagen, type
XXIV, alpha 1
Length=1733
Score = 42.4 bits (98), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 45/116 (38%), Gaps = 1/116 (0%)
Query 42 VGVVQMTFLRLLSASAHQNITYNCYQSVAWQDAATGSYDKAMRFLGSNDEEMSYDNSPYI 101
V VQM FL LLS+ A IT +C + W + + F G N + +
Sbjct 1618 VSKVQMNFLHLLSSEATHTITIHCLNTPRWSSTWADGPELPISFKGWNGQIFEENTLLEP 1677
Query 102 RALVDGCATKKG-YQKTVLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFL 156
+ L D C + G + K T Q+P+ ++ QK E CFL
Sbjct 1678 QVLSDDCKIQDGSWHKAKFLFHTQNPNQLPVTEVQNLPHLGTEQKRYIESNSVCFL 1733
> cel:Y65B4A.1 hypothetical protein; K13093 HIV Tat-specific factor
1
Length=442
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query 20 STWYSQY-KRGSLLSYVDAEGNPVGVVQMTFLRLL 53
+ WY +Y + G LL ++D + PVG+ ++ FL L
Sbjct 42 NKWYGKYGEDGDLLEHIDEDWEPVGLDEVEFLSQL 76
> dre:100332483 collagen, type XI, alpha 2-like
Length=305
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 14/115 (12%)
Query 42 VGVVQMTFLRLLSASAHQNITYNCYQSVAWQDAATGSYDKAMRFLGSNDEEMSYDNSPYI 101
VG VQM FL LLS+S Q+++ + A D + +R G N +S
Sbjct 205 VGKVQMKFLHLLSSSVSQSVSICSSEP-AVTDTHSTHAPHTLRLHGWNGHVFQESSSAGP 263
Query 102 RALVDGCATKKGYQKTVLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFL 156
++ C + + + T +Q+P+V I GE + EVGP CFL
Sbjct 264 DEILHNCES--------VFLQTQHTQQLPLVGI--EGLGEQRR---VEVGPVCFL 305
> cpv:cgd6_4080 hypothetical protein
Length=506
Score = 30.0 bits (66), Expect = 3.4, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query 26 YKRGSLLSYVDAEGNPVGVVQMTFLRLLSASAHQNITYNCYQ--SVAWQDAATGSYDKAM 83
+ +GS + + + N ++QM + LL S +N +Q S +W + T +YD
Sbjct 133 FSQGSKCNTENLDNNCFNIIQMLKIELLKHSGDKNNELKNFQVSSHSWNNEITTNYDIKY 192
Query 84 RFLGSNDEEMSY 95
G +D+E +
Sbjct 193 EEKGKSDKENEF 204
> ath:AT5G23960 TPS21; TPS21 (TERPENE SYNTHASE 21); (-)-E-beta-caryophyllene
synthase/ alpha-humulene synthase; K14184 beta-caryophyllene/alpha-humulene
synthase [EC:4.2.3.57 4.2.3.-]
Length=547
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query 64 NCYQSVAWQDAATGSYDKAMRFLGSNDEEMSYDNSPYIRALVDGCATKKGYQKTVLEIDT 123
+ Y++ W D+A+ F S+ EE+S +SP++ + A K Y K + I+T
Sbjct 148 SLYEAAQWGTHGEDIIDEALAFSRSHLEEISSRSSPHLAIRIKN-ALKHPYHKGISRIET 206
> cel:C36E8.4 hypothetical protein
Length=548
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query 67 QSVAWQDAATGSYDKAMRFLGSNDEEMSYDNSPYIRALVDGCATKKGYQKTVLEIDTPKV 126
Q +A A G Y + + LG N +M +S + VD + Y +T+ + T V
Sbjct 251 QRLAHCQTALGRYKRKIETLGPNLRQMFERHSNNLELAVDSVP--EDYIQTI-QPSTSAV 307
Query 127 EQVPIVDIMFNDFGEA 142
+ ++D+ +FGE
Sbjct 308 NHITLIDLHAENFGEV 323
Lambda K H
0.318 0.133 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 3516928200
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40