bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_0313_orf2
Length=222
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_048340 GTP-binding nuclear protein RAN/TC4, putativ... 394 2e-109
cpv:cgd7_220 GTP-binding nuclear protein ran/tc4 ; K07936 GTP-... 389 3e-108
tpv:TP01_0757 GTP-binding nuclear protein ran; K07936 GTP-bind... 366 3e-101
pfa:PF11_0183 ran; GTP-binding nuclear protein ran/tc4; K07936... 353 3e-97
bbo:BBOV_IV010920 23.m06098; GTP-binding nuclear protein Ran; ... 352 4e-97
xla:100189578 ran, ara24, gsp1, ran-1, tc4, xran; RAN, member ... 329 4e-90
xla:379874 ran-1, MGC53579, ran; RAN, member RAS oncogene fami... 328 6e-90
mmu:19384 Ran; RAN, member RAS oncogene family; K07936 GTP-bin... 327 2e-89
mmu:100045999 GTP-binding nuclear protein Ran-like; K07936 GTP... 327 2e-89
hsa:5901 RAN, ARA24, Gsp1, TC4; RAN, member RAS oncogene famil... 327 2e-89
dre:30572 ran, fc16b04, wu:fc16b04; ras-related nuclear protei... 323 3e-88
mmu:75471 1700009N14Rik, AI429145; RIKEN cDNA 1700009N14 gene;... 323 4e-88
sce:YOR185C GSP2, CNR2; GTP binding protein (mammalian Ranp ho... 321 1e-87
mmu:19428 Rasl2-9-ps, M2, Ran, Ran/M2, Rasl2-9; RAS-like, fami... 313 3e-85
cel:K01G5.4 ran-1; associated with RAN (nuclear import/export)... 312 5e-85
sce:YLR293C GSP1, CNR1, CST17; Gsp1p; K07936 GTP-binding nucle... 311 1e-84
ath:AT5G55190 RAN3; RAN3 (RAN GTPASE 3); GTP binding / GTPase/... 309 5e-84
ath:AT5G20010 RAN-1; RAN-1; GTP binding / GTPase/ protein bind... 303 3e-82
ath:AT5G20020 RAN2; RAN2; GTP binding / GTPase/ protein bindin... 294 1e-79
ath:AT5G55080 AtRAN4; AtRAN4 (Ras-related nuclear protein 4); ... 244 1e-64
mmu:56382 Rab9, 2410064E05Rik, AI195561, Rab9a, Sid6061p; RAB9... 115 1e-25
mmu:75985 Rab30, 5033421K01Rik, AI323892, Rsb30; RAB30, member... 114 3e-25
hsa:27314 RAB30; RAB30, member RAS oncogene family; K07917 Ras... 114 3e-25
xla:398880 rab7a, MGC68523, rab7; RAB7A, member RAS oncogene f... 114 4e-25
xla:443930 rab9a-b, MGC85096; RAB9A, member RAS oncogene family 112 7e-25
mmu:19349 Rab7, MGC102153, Rab7a; RAB7, member RAS oncogene fa... 112 9e-25
hsa:7879 RAB7A, FLJ20819, PRO2706, RAB7; RAB7A, member RAS onc... 112 9e-25
xla:446841 rab7, MGC80674; RAB7, member RAS oncogene family; K... 112 1e-24
dre:393902 rab7, MGC64058, rab-7, zgc:64058; RAB7, member RAS ... 112 1e-24
hsa:9367 RAB9A, RAB9; RAB9A, member RAS oncogene family; K0789... 112 1e-24
dre:431725 wu:fj84g10; zgc:91909; K07897 Ras-related protein R... 111 2e-24
xla:414631 rab9a-a; RAB9A, member RAS oncogene family; K07899 ... 110 3e-24
xla:432259 rab30, MGC83515; RAB30, member RAS oncogene family;... 110 3e-24
dre:449549 zgc:100918; K07897 Ras-related protein Rab-7A 110 5e-24
xla:398835 rab10, MGC68629; RAB10, member RAS oncogene family;... 109 7e-24
bbo:BBOV_III007360 17.m10679; Rab1a 108 1e-23
dre:436839 zgc:92757; K07903 Ras-related protein Rab-10 108 1e-23
dre:437023 rab30, zgc:100889; RAB30, member RAS oncogene famil... 108 2e-23
bbo:BBOV_III000780 17.m07097; Rab1b 108 2e-23
hsa:51209 RAB9B, RAB9L, Rab-9L; RAB9B, member RAS oncogene fam... 107 4e-23
cel:C39F7.4 rab-1; RAB family member (rab-1); K07874 Ras-relat... 107 4e-23
cel:W03C9.3 rab-7; RAB family member (rab-7); K07897 Ras-relat... 107 4e-23
mmu:319642 Rab9b, 9330195C02Rik, MGC130383; RAB9B, member RAS ... 107 4e-23
dre:751756 rab9a, MGC153391, zgc:153391; RAB9A, member RAS onc... 107 4e-23
mmu:19325 Rab10, AW107754; RAB10, member RAS oncogene family; ... 107 4e-23
hsa:10890 RAB10; RAB10, member RAS oncogene family; K07903 Ras... 107 4e-23
dre:100124616 zgc:171927 106 5e-23
dre:373105 rab13, cb764, hm:zeh0455; RAB13, member RAS oncogen... 105 1e-22
ath:AT5G39620 AtRABG1 (Arabidopsis Rab GTPase homolog G1); GTP... 105 2e-22
xla:446683 rabl2b, MGC83481; RAB, member of RAS oncogene famil... 105 2e-22
> tgo:TGME49_048340 GTP-binding nuclear protein RAN/TC4, putative
(EC:3.1.4.12); K07936 GTP-binding nuclear protein Ran
Length=216
Score = 394 bits (1011), Expect = 2e-109, Method: Compositional matrix adjust.
Identities = 186/208 (89%), Positives = 198/208 (95%), Gaps = 0/208 (0%)
Query 15 VPEFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTA 74
VPEFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEV PL+F TNFG I FNVWDTA
Sbjct 9 VPEFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVHPLKFQTNFGMITFNVWDTA 68
Query 75 GQEKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCENIPIVLVGNKVDVK 134
GQEKFGGLRDGYYIKGQCAIMMFDVT+RITY+NIPNW+RDI RVCENIPIVLVGNKVDVK
Sbjct 69 GQEKFGGLRDGYYIKGQCAIMMFDVTARITYKNIPNWYRDITRVCENIPIVLVGNKVDVK 128
Query 135 DRQVKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQASLTFTGEHAKAPEIM 194
DRQVKAR IQFHRK+NLQYYDISARSNYNFEKPFLWLARRLTNQ +L+F GEHAKAPEI
Sbjct 129 DRQVKARQIQFHRKRNLQYYDISARSNYNFEKPFLWLARRLTNQPALSFVGEHAKAPEIQ 188
Query 195 IDPSLVQQAERELQEAVNTAIEDDDDDL 222
IDP+LVQ+AERELQ AV+TAI+DDD+DL
Sbjct 189 IDPNLVQEAERELQAAVSTAIDDDDEDL 216
> cpv:cgd7_220 GTP-binding nuclear protein ran/tc4 ; K07936 GTP-binding
nuclear protein Ran
Length=212
Score = 389 bits (1000), Expect = 3e-108, Method: Compositional matrix adjust.
Identities = 180/212 (84%), Positives = 196/212 (92%), Gaps = 0/212 (0%)
Query 11 MTEQVPEFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNV 70
M Q PEFKL LVGDGGVGKTTLVKRHLTGEFEKKYIPT+GVEV PL+F+T+FGP++FNV
Sbjct 1 MAAQAPEFKLALVGDGGVGKTTLVKRHLTGEFEKKYIPTIGVEVHPLKFNTDFGPLIFNV 60
Query 71 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCENIPIVLVGNK 130
WDTAGQEKFGGLRDGYYIKGQCAI+MFDVTSRITY+N+PNWHRDIVRVCENIPIVLVGNK
Sbjct 61 WDTAGQEKFGGLRDGYYIKGQCAIIMFDVTSRITYKNVPNWHRDIVRVCENIPIVLVGNK 120
Query 131 VDVKDRQVKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQASLTFTGEHAKA 190
VDVKDRQVKAR IQ+HRK+NLQYYDISARSNYNFEKPFLWLARRLTNQ +L G+HAKA
Sbjct 121 VDVKDRQVKARQIQYHRKRNLQYYDISARSNYNFEKPFLWLARRLTNQPALQLVGQHAKA 180
Query 191 PEIMIDPSLVQQAERELQEAVNTAIEDDDDDL 222
PE+ IDP+LV QAEREL EA N IEDDD+DL
Sbjct 181 PEVNIDPTLVAQAERELSEAANAPIEDDDEDL 212
> tpv:TP01_0757 GTP-binding nuclear protein ran; K07936 GTP-binding
nuclear protein Ran
Length=211
Score = 366 bits (940), Expect = 3e-101, Method: Compositional matrix adjust.
Identities = 170/210 (80%), Positives = 188/210 (89%), Gaps = 0/210 (0%)
Query 11 MTEQVPEFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNV 70
M E+VP+FKL+LVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEV PL+F TN G + FN
Sbjct 1 MAEEVPQFKLLLVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVHPLKFRTNCGTVQFNA 60
Query 71 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCENIPIVLVGNK 130
WDTAGQEK+GGLRDGYYIKG+CAI+MFDVTSRITYRN+PNWHRDIVRVCENIP+VLVGNK
Sbjct 61 WDTAGQEKYGGLRDGYYIKGECAIIMFDVTSRITYRNVPNWHRDIVRVCENIPMVLVGNK 120
Query 131 VDVKDRQVKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQASLTFTGEHAKA 190
DVK+RQVKA IQFHRK+NLQYYD+SARSNYNFE+PFLWLARRL N+ L F GE AKA
Sbjct 121 ADVKERQVKAAHIQFHRKRNLQYYDLSARSNYNFERPFLWLARRLLNKPQLVFVGECAKA 180
Query 191 PEIMIDPSLVQQAERELQEAVNTAIEDDDD 220
PEI IDP LVQQ+EREL+ A N AI+DD D
Sbjct 181 PEIAIDPMLVQQSERELEAAANVAIDDDGD 210
> pfa:PF11_0183 ran; GTP-binding nuclear protein ran/tc4; K07936
GTP-binding nuclear protein Ran
Length=214
Score = 353 bits (906), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 161/207 (77%), Positives = 186/207 (89%), Gaps = 0/207 (0%)
Query 13 EQVPEFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWD 72
E +P++KLILVGDGGVGKTT VKRHLTGEFEKKYIPTLGVEV PL+F TNFG FNVWD
Sbjct 5 EYIPQYKLILVGDGGVGKTTFVKRHLTGEFEKKYIPTLGVEVHPLKFQTNFGKTQFNVWD 64
Query 73 TAGQEKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCENIPIVLVGNKVD 132
TAGQEKFGGLRDGYYIK CAI+MFDV+SRITY+N+PNW+RDI RVCE IP+VLVGNKVD
Sbjct 65 TAGQEKFGGLRDGYYIKSDCAIIMFDVSSRITYKNVPNWYRDITRVCETIPMVLVGNKVD 124
Query 133 VKDRQVKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQASLTFTGEHAKAPE 192
VKDRQVK+R IQFHRK+NLQYYD+SARSNYNFEKPFLWLARRL+NQ +L F GEHAKAPE
Sbjct 125 VKDRQVKSRQIQFHRKRNLQYYDLSARSNYNFEKPFLWLARRLSNQPNLVFVGEHAKAPE 184
Query 193 IMIDPSLVQQAERELQEAVNTAIEDDD 219
ID ++V++AE+EL++A AI+++D
Sbjct 185 FQIDLNIVREAEKELEQAAAVAIDEED 211
> bbo:BBOV_IV010920 23.m06098; GTP-binding nuclear protein Ran;
K07936 GTP-binding nuclear protein Ran
Length=211
Score = 352 bits (904), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 163/210 (77%), Positives = 182/210 (86%), Gaps = 0/210 (0%)
Query 11 MTEQVPEFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNV 70
M E++P+FKL+LVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEV PL+F TN G I FN
Sbjct 1 MAEEMPQFKLLLVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVHPLKFRTNCGGIQFNA 60
Query 71 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCENIPIVLVGNK 130
WDTAGQEK+GGLRDGYYIKG+CAI+MFDVTSRITYRN+PNWHRDIVRVC+NIP+VL GNK
Sbjct 61 WDTAGQEKYGGLRDGYYIKGECAIIMFDVTSRITYRNVPNWHRDIVRVCDNIPMVLCGNK 120
Query 131 VDVKDRQVKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQASLTFTGEHAKA 190
DVK+RQVKA IQFHRK+NLQYYD+SARSN+NFE+PFLWLARRL NQ L F GE AK
Sbjct 121 ADVKERQVKAGHIQFHRKRNLQYYDLSARSNFNFERPFLWLARRLLNQPQLVFVGECAKE 180
Query 191 PEIMIDPSLVQQAERELQEAVNTAIEDDDD 220
PE IDP L Q+ ER L+ A N AI+DD D
Sbjct 181 PEFRIDPQLAQECERNLEAAANVAIDDDGD 210
> xla:100189578 ran, ara24, gsp1, ran-1, tc4, xran; RAN, member
RAS oncogene family; K07936 GTP-binding nuclear protein Ran
Length=216
Score = 329 bits (844), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 154/207 (74%), Positives = 177/207 (85%), Gaps = 1/207 (0%)
Query 17 EFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQ 76
+FKL+LVGDGG GKTT VKRHLTGEFEKKY+ TLGVEV PL F TN GPI FNVWDTAGQ
Sbjct 10 QFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQ 69
Query 77 EKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCENIPIVLVGNKVDVKDR 136
EKFGGLRDGYYI+ QCAI+MFDVTSR+TY+N+PNWHRD+VRVCENIPIVL GNKVD+KDR
Sbjct 70 EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDR 129
Query 137 QVKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQASLTFTGEHAKA-PEIMI 195
+VKA+ I FHRKKNLQYYDISA+SNYNFEKPFLWLAR+L +L F A A PE+++
Sbjct 130 KVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEVVM 189
Query 196 DPSLVQQAERELQEAVNTAIEDDDDDL 222
DP+L Q E++LQ A TA+ D+DDDL
Sbjct 190 DPALAAQYEQDLQNAQATALPDEDDDL 216
> xla:379874 ran-1, MGC53579, ran; RAN, member RAS oncogene family;
K07936 GTP-binding nuclear protein Ran
Length=216
Score = 328 bits (842), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 154/207 (74%), Positives = 176/207 (85%), Gaps = 1/207 (0%)
Query 17 EFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQ 76
+FKL+LVGDGG GKTT VKRHLTGEFEKKY+ TLGVEV PL F TN GPI FNVWDTAGQ
Sbjct 10 QFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQ 69
Query 77 EKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCENIPIVLVGNKVDVKDR 136
EKFGGLRDGYYI+ QCAI+MFDVTSR+TY+N+PNWHRD+VRVCENIPIVL GNKVD+KDR
Sbjct 70 EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDR 129
Query 137 QVKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQASLTFTGEHAKA-PEIMI 195
+VKA+ I FHRKKNLQYYDISA+SNYNFEKPFLWLAR+L +L F A A PE+++
Sbjct 130 KVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEVVM 189
Query 196 DPSLVQQAERELQEAVNTAIEDDDDDL 222
DP+L Q E +LQ A TA+ D+DDDL
Sbjct 190 DPALAAQYEADLQNAQATALPDEDDDL 216
> mmu:19384 Ran; RAN, member RAS oncogene family; K07936 GTP-binding
nuclear protein Ran
Length=216
Score = 327 bits (839), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 153/207 (73%), Positives = 176/207 (85%), Gaps = 1/207 (0%)
Query 17 EFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQ 76
+FKL+LVGDGG GKTT VKRHLTGEFEKKY+ TLGVEV PL F TN GPI FNVWDTAGQ
Sbjct 10 QFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQ 69
Query 77 EKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCENIPIVLVGNKVDVKDR 136
EKFGGLRDGYYI+ QCAI+MFDVTSR+TY+N+PNWHRD+VRVCENIPIVL GNKVD+KDR
Sbjct 70 EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDR 129
Query 137 QVKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQASLTFTGEHAKA-PEIMI 195
+VKA+ I FHRKKNLQYYDISA+SNYNFEKPFLWLAR+L +L F A A PE+++
Sbjct 130 KVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEVVM 189
Query 196 DPSLVQQAERELQEAVNTAIEDDDDDL 222
DP+L Q E +L+ A TA+ D+DDDL
Sbjct 190 DPALAAQYEHDLEVAQTTALPDEDDDL 216
> mmu:100045999 GTP-binding nuclear protein Ran-like; K07936 GTP-binding
nuclear protein Ran
Length=216
Score = 327 bits (839), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 153/207 (73%), Positives = 176/207 (85%), Gaps = 1/207 (0%)
Query 17 EFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQ 76
+FKL+LVGDGG GKTT VKRHLTGEFEKKY+ TLGVEV PL F TN GPI FNVWDTAGQ
Sbjct 10 QFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQ 69
Query 77 EKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCENIPIVLVGNKVDVKDR 136
EKFGGLRDGYYI+ QCAI+MFDVTSR+TY+N+PNWHRD+VRVCENIPIVL GNKVD+KDR
Sbjct 70 EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDR 129
Query 137 QVKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQASLTFTGEHAKA-PEIMI 195
+VKA+ I FHRKKNLQYYDISA+SNYNFEKPFLWLAR+L +L F A A PE+++
Sbjct 130 KVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEVVM 189
Query 196 DPSLVQQAERELQEAVNTAIEDDDDDL 222
DP+L Q E +L+ A TA+ D+DDDL
Sbjct 190 DPALAAQYEHDLEVAQTTALPDEDDDL 216
> hsa:5901 RAN, ARA24, Gsp1, TC4; RAN, member RAS oncogene family;
K07936 GTP-binding nuclear protein Ran
Length=216
Score = 327 bits (839), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 153/207 (73%), Positives = 176/207 (85%), Gaps = 1/207 (0%)
Query 17 EFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQ 76
+FKL+LVGDGG GKTT VKRHLTGEFEKKY+ TLGVEV PL F TN GPI FNVWDTAGQ
Sbjct 10 QFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQ 69
Query 77 EKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCENIPIVLVGNKVDVKDR 136
EKFGGLRDGYYI+ QCAI+MFDVTSR+TY+N+PNWHRD+VRVCENIPIVL GNKVD+KDR
Sbjct 70 EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDR 129
Query 137 QVKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQASLTFTGEHAKA-PEIMI 195
+VKA+ I FHRKKNLQYYDISA+SNYNFEKPFLWLAR+L +L F A A PE+++
Sbjct 130 KVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEVVM 189
Query 196 DPSLVQQAERELQEAVNTAIEDDDDDL 222
DP+L Q E +L+ A TA+ D+DDDL
Sbjct 190 DPALAAQYEHDLEVAQTTALPDEDDDL 216
> dre:30572 ran, fc16b04, wu:fc16b04; ras-related nuclear protein;
K07936 GTP-binding nuclear protein Ran
Length=215
Score = 323 bits (828), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 155/215 (72%), Positives = 177/215 (82%), Gaps = 3/215 (1%)
Query 11 MTEQVPE--FKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVF 68
M E P+ FKL+LVGDGG GKTT VKRHLTGEFEKKY+ TLGVEV PL F TN G I +
Sbjct 1 MAENEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKY 60
Query 69 NVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCENIPIVLVG 128
NVWDTAGQEKFGGLRDGYYI+ QCAI+MFDVTSR+TY+N+PNWHRD+VRVCENIPIVL G
Sbjct 61 NVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCG 120
Query 129 NKVDVKDRQVKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQASLTFTGEHA 188
NKVD+KDR+VKA+ I FHRKKNLQYYDISA+SNYNFEKPFLWLAR+L +L F A
Sbjct 121 NKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVEMPA 180
Query 189 KA-PEIMIDPSLVQQAERELQEAVNTAIEDDDDDL 222
A PEI +DP+L Q E +L+ A TA+ D+DDDL
Sbjct 181 LAPPEIAMDPTLAAQYEHDLKVASETALPDEDDDL 215
> mmu:75471 1700009N14Rik, AI429145; RIKEN cDNA 1700009N14 gene;
K07936 GTP-binding nuclear protein Ran
Length=216
Score = 323 bits (827), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 152/207 (73%), Positives = 177/207 (85%), Gaps = 1/207 (0%)
Query 17 EFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQ 76
+FKL+LVGDGG GKT VKRHLTGEFEKKY+ TLGVEV PL F T+ GPI FNVWDTAGQ
Sbjct 10 QFKLVLVGDGGTGKTAFVKRHLTGEFEKKYVATLGVEVHPLMFHTSRGPIKFNVWDTAGQ 69
Query 77 EKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCENIPIVLVGNKVDVKDR 136
EKFGGLRDGYYI+ Q AI+MFDVTSRITY+N+PNWHRD+VRVCENIPIVL GNKVDVKDR
Sbjct 70 EKFGGLRDGYYIQAQGAIIMFDVTSRITYKNVPNWHRDLVRVCENIPIVLCGNKVDVKDR 129
Query 137 QVKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQASLTFTGEHAKA-PEIMI 195
+VKA+ I FHRKKNLQYYDISA+SNYNFEKPFLWL+RRLT ++L F A A PE+++
Sbjct 130 KVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLSRRLTGDSNLEFVAMPALAPPEVVM 189
Query 196 DPSLVQQAERELQEAVNTAIEDDDDDL 222
DP+L ++ E +L+ A TA+ D+DDDL
Sbjct 190 DPALAKKYEHDLEVAQATALPDEDDDL 216
> sce:YOR185C GSP2, CNR2; GTP binding protein (mammalian Ranp
homolog) involved in the maintenance of nuclear organization,
RNA processing and transport; interacts with Kap121p, Kap123p
and Pdr6p (karyophilin betas); Gsp1p homolog that is not
required for viability; K07936 GTP-binding nuclear protein
Ran
Length=220
Score = 321 bits (823), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 149/208 (71%), Positives = 171/208 (82%), Gaps = 1/208 (0%)
Query 14 QVPEFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDT 73
+VP FKL+LVGDGG GKTT VKRHLTGEFEKKYI T+GVEV PL F TNFG I F+VWDT
Sbjct 10 EVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDT 69
Query 74 AGQEKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCENIPIVLVGNKVDV 133
AGQEKFGGLRDGYYI QCAI+MFDVTSRITY+N+PNWHRD+VRVCENIPIVL GNKVDV
Sbjct 70 AGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRVCENIPIVLCGNKVDV 129
Query 134 KDRQVKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQASLTFTGEHAKA-PE 192
K+R+VKA+ I FHRKKNLQYYDISA+SNYNFEKPFLWLAR+L L F A A PE
Sbjct 130 KERKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAGNPQLEFVASPALAPPE 189
Query 193 IMIDPSLVQQAERELQEAVNTAIEDDDD 220
+ +D L+ Q ++E+ +A + D+DD
Sbjct 190 VQVDEQLMHQYQQEMDQATALPLPDEDD 217
> mmu:19428 Rasl2-9-ps, M2, Ran, Ran/M2, Rasl2-9; RAS-like, family
2, locus 9, pseudogene; K07936 GTP-binding nuclear protein
Ran
Length=216
Score = 313 bits (802), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 146/207 (70%), Positives = 173/207 (83%), Gaps = 1/207 (0%)
Query 17 EFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQ 76
+FK++LVGDGG GKTT +KRHLTGEFEK+Y+ TLGVEV L F TN GPI FNVWDTAGQ
Sbjct 10 QFKVVLVGDGGTGKTTFMKRHLTGEFEKEYVATLGVEVHTLVFHTNRGPIKFNVWDTAGQ 69
Query 77 EKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCENIPIVLVGNKVDVKDR 136
EKFGGLRDGYYI+ QCAI+MFDVTSR+TY+N+P+WH+D+VRVCENIPIVL GNKVDVKD
Sbjct 70 EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPSWHKDLVRVCENIPIVLCGNKVDVKDM 129
Query 137 QVKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQASLTFTGEHAKA-PEIMI 195
+VKA+ I FHRKKNLQYYDISARSNYNFEKPF WLAR+L +L F A A PE+++
Sbjct 130 KVKAKPILFHRKKNLQYYDISARSNYNFEKPFFWLARKLIGDPNLEFVAMPALAPPEVVM 189
Query 196 DPSLVQQAERELQEAVNTAIEDDDDDL 222
DP+L Q E +L+ A TA+ D++DDL
Sbjct 190 DPALAAQYEHDLEVAQTTALPDEEDDL 216
> cel:K01G5.4 ran-1; associated with RAN (nuclear import/export)
function family member (ran-1); K07936 GTP-binding nuclear
protein Ran
Length=215
Score = 312 bits (800), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 144/200 (72%), Positives = 168/200 (84%), Gaps = 1/200 (0%)
Query 13 EQVPEFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWD 72
+ +P FKL+LVGDGG GKTT VKRHLTGEFEKKY+ TLGVEV PL F TN G I FNVWD
Sbjct 5 DGIPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWD 64
Query 73 TAGQEKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCENIPIVLVGNKVD 132
TAGQEKFGGLRDGYYI+GQCAI+MFDVT+R+TY+N+PNWHRD+ RVCENIPIVL GNKVD
Sbjct 65 TAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDLARVCENIPIVLCGNKVD 124
Query 133 VKDRQVKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQASLTFTGEHAKA-P 191
VKDR+VKA+ I FHRKKNLQYYDISA+SNYNFEKPFLWLAR+L +L F A A P
Sbjct 125 VKDRKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLLGDPNLEFVAMPALAPP 184
Query 192 EIMIDPSLVQQAERELQEAV 211
E+ +DP+++ + E++L A
Sbjct 185 EVQMDPAMIAEYEKDLDNAA 204
> sce:YLR293C GSP1, CNR1, CST17; Gsp1p; K07936 GTP-binding nuclear
protein Ran
Length=219
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 150/208 (72%), Positives = 173/208 (83%), Gaps = 1/208 (0%)
Query 14 QVPEFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDT 73
+VP FKL+LVGDGG GKTT VKRHLTGEFEKKYI T+GVEV PL F TNFG I F+VWDT
Sbjct 9 EVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDT 68
Query 74 AGQEKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCENIPIVLVGNKVDV 133
AGQEKFGGLRDGYYI QCAI+MFDVTSRITY+N+PNWHRD+VRVCENIPIVL GNKVDV
Sbjct 69 AGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRVCENIPIVLCGNKVDV 128
Query 134 KDRQVKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQASLTFTGEHAKA-PE 192
K+R+VKA+ I FHRKKNLQYYDISA+SNYNFEKPFLWLAR+L L F A A PE
Sbjct 129 KERKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAGNPQLEFVASPALAPPE 188
Query 193 IMIDPSLVQQAERELQEAVNTAIEDDDD 220
+ +D L+QQ ++E+++A + D+DD
Sbjct 189 VQVDEQLMQQYQQEMEQATALPLPDEDD 216
> ath:AT5G55190 RAN3; RAN3 (RAN GTPASE 3); GTP binding / GTPase/
protein binding; K07936 GTP-binding nuclear protein Ran
Length=221
Score = 309 bits (791), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 147/213 (69%), Positives = 169/213 (79%), Gaps = 1/213 (0%)
Query 10 KMTEQVPEFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFN 69
+ T P FKL++VGDGG GKTT VKRHLTGEFEKKY PT+GVEV PL F TN G I F
Sbjct 6 QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFY 65
Query 70 VWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCENIPIVLVGN 129
WDTAGQEKFGGLRDGYYI GQCAI+MFDVT+R+TY+N+P WHRD+ RVCENIPIVL GN
Sbjct 66 CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGN 125
Query 130 KVDVKDRQVKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQASLTFTGEHAK 189
KVDVK+RQVKA+ + FHRKKNLQYY+ISA+SNYNFEKPFL+LAR+L A+L F A
Sbjct 126 KVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPAL 185
Query 190 A-PEIMIDPSLVQQAERELQEAVNTAIEDDDDD 221
A PE+ ID + QQ E EL A + + DDDDD
Sbjct 186 APPEVQIDLAAQQQHEAELAAAASQPLPDDDDD 218
> ath:AT5G20010 RAN-1; RAN-1; GTP binding / GTPase/ protein binding;
K07936 GTP-binding nuclear protein Ran
Length=221
Score = 303 bits (776), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 145/214 (67%), Positives = 169/214 (78%), Gaps = 1/214 (0%)
Query 10 KMTEQVPEFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFN 69
+ T P FKL++VGDGG GKTT VKRHLTGEFEKKY PT+GVEV PL F TN G I F
Sbjct 6 QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFY 65
Query 70 VWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCENIPIVLVGN 129
WDTAGQEKFGGLRDGYYI GQCAI+MFDVT+R+TY+N+P WHRD+ RVCENIPIVL GN
Sbjct 66 CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGN 125
Query 130 KVDVKDRQVKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQASLTFTGEHAK 189
KVDVK+RQVKA+ + FHRKKNLQYY+ISA+SNYNFEKPFL+LAR+L +L F A
Sbjct 126 KVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFVETPAL 185
Query 190 A-PEIMIDPSLVQQAERELQEAVNTAIEDDDDDL 222
A PE+ ID + Q+ E EL +A + DDDDD+
Sbjct 186 APPEVHIDIADQQKNEAELLQAAAQPLPDDDDDI 219
> ath:AT5G20020 RAN2; RAN2; GTP binding / GTPase/ protein binding;
K07936 GTP-binding nuclear protein Ran
Length=221
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 167/213 (78%), Gaps = 1/213 (0%)
Query 10 KMTEQVPEFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFN 69
+ T P FKL++VGDGG GKTT VKRHLTGEFEKKY PT+GVEV PL F TN G I F
Sbjct 6 QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFY 65
Query 70 VWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCENIPIVLVGN 129
WDTAGQEKFGGLRDGYYI GQCAI+MFDVT+R+TY+N+P WHRD+ RVCENIPIVL GN
Sbjct 66 CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGN 125
Query 130 KVDVKDRQVKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQASLTFTGEHAK 189
KVDVK+RQVKA+ + FHRKKNLQYY+ISA+SNYNFEKPFL+LAR+L +L F A
Sbjct 126 KVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFVESPAL 185
Query 190 A-PEIMIDPSLVQQAERELQEAVNTAIEDDDDD 221
A PE+ +D + QQ E +L A + DDDDD
Sbjct 186 APPEVHLDIAAQQQNEADLAAAAAQPLPDDDDD 218
> ath:AT5G55080 AtRAN4; AtRAN4 (Ras-related nuclear protein 4);
GTP binding / GTPase/ protein binding; K07936 GTP-binding
nuclear protein Ran
Length=222
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 118/196 (60%), Positives = 143/196 (72%), Gaps = 10/196 (5%)
Query 1 FPNPPPTDLKMTEQVPEFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFS 60
PN DL P FKL++VGDGG GKTT +KRHLTGEFE PTLGV++ PL F
Sbjct 3 LPNQQNVDL------PTFKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFF 56
Query 61 TNFGPIVFNVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCE 120
TN G I F WDTAGQEK+ GL+D YYI GQCAI+MFDVT+R TY NI W+RD+ RVC+
Sbjct 57 TNRGKIRFECWDTAGQEKYSGLKDAYYIHGQCAIIMFDVTARHTYMNIDRWYRDLRRVCK 116
Query 121 NIPIVLVGNKVDVKDRQVKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQAS 180
NIPIVL GNKVDV RQ+K + + +HRKK LQYY++SA++N NFEKPFL+LARR+ A
Sbjct 117 NIPIVLCGNKVDVPSRQIKPKHVSYHRKKCLQYYEMSAKNNCNFEKPFLYLARRIAGDAK 176
Query 181 LTFTGEHAKAPEIMID 196
L+F ++PE ID
Sbjct 177 LSF----VESPEAQID 188
> mmu:56382 Rab9, 2410064E05Rik, AI195561, Rab9a, Sid6061p; RAB9,
member RAS oncogene family; K07899 Ras-related protein Rab-9A
Length=201
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 94/172 (54%), Gaps = 7/172 (4%)
Query 11 MTEQVPEFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNV 70
M + FK+IL+GDGGVGK++L+ R++T +F+ + T+GVE + + +
Sbjct 1 MAGKSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQI 60
Query 71 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVC-----ENIPIV 125
WDTAGQE+F LR +Y C ++ F V +++N+ NW ++ + E+ P V
Sbjct 61 WDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFV 120
Query 126 LVGNKVDVKDRQVKARVIQFHRKKN--LQYYDISARSNYNFEKPFLWLARRL 175
++GNK D+K+RQV Q K N Y++ SA+ + N F RR+
Sbjct 121 ILGNKTDIKERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRI 172
> mmu:75985 Rab30, 5033421K01Rik, AI323892, Rsb30; RAB30, member
RAS oncogene family; K07917 Ras-related protein Rab-30
Length=203
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 94/165 (56%), Gaps = 3/165 (1%)
Query 18 FKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQE 77
FK++L+G+ GVGKT LV+R G F T+GV+ N + +WDTAGQE
Sbjct 10 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQE 69
Query 78 KFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCEN-IPIVLVGNKVDVKDR 136
+F + YY I+ +D+T ++R +P W R+I + N + VLVGNK+D+ +R
Sbjct 70 RFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAER 129
Query 137 Q--VKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQA 179
+ + R +F +++ Y + SA+ + N EK FL LA RL ++A
Sbjct 130 REVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEA 174
> hsa:27314 RAB30; RAB30, member RAS oncogene family; K07917 Ras-related
protein Rab-30
Length=203
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 94/165 (56%), Gaps = 3/165 (1%)
Query 18 FKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQE 77
FK++L+G+ GVGKT LV+R G F T+GV+ N + +WDTAGQE
Sbjct 10 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQE 69
Query 78 KFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCEN-IPIVLVGNKVDVKDR 136
+F + YY I+ +D+T ++R +P W R+I + N + VLVGNK+D+ +R
Sbjct 70 RFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAER 129
Query 137 Q--VKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQA 179
+ + R +F +++ Y + SA+ + N EK FL LA RL ++A
Sbjct 130 REVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEA 174
> xla:398880 rab7a, MGC68523, rab7; RAB7A, member RAS oncogene
family; K07897 Ras-related protein Rab-7A
Length=207
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 97/170 (57%), Gaps = 7/170 (4%)
Query 18 FKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQE 77
K+I++GD GVGKT+L+ +++ +F +Y T+G + + + +WDTAGQE
Sbjct 9 LKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68
Query 78 KFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIV-----RVCENIPIVLVGNKVD 132
+F L +Y C ++++DVT+ T++ + +W + + R EN P V++GNKVD
Sbjct 69 RFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKVD 128
Query 133 VKDRQVKARVIQF--HRKKNLQYYDISARSNYNFEKPFLWLARRLTNQAS 180
+++RQV + Q H K N+ Y++ SA+ N E+ F +AR Q +
Sbjct 129 LENRQVTTKRAQVWCHSKNNIPYFETSAKEAINVEQAFQTIARNALKQET 178
> xla:443930 rab9a-b, MGC85096; RAB9A, member RAS oncogene family
Length=201
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 95/172 (55%), Gaps = 7/172 (4%)
Query 11 MTEQVPEFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNV 70
M+ + K+IL+GDGGVGK++L+ R++T +F+ + T+GVE + + +
Sbjct 1 MSTKSSLLKIILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKELEVDGHMVTMQI 60
Query 71 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDI-----VRVCENIPIV 125
WDTAGQE+F LR +Y C ++ F V +++N+ NW ++ V+ +N P+V
Sbjct 61 WDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLTNWKKEFIFYADVKDPDNFPLV 120
Query 126 LVGNKVDVKDRQVKARVIQFHRKKNLQ--YYDISARSNYNFEKPFLWLARRL 175
++GNK+D+ DRQV Q + N Y++ SA+ N F RR+
Sbjct 121 VLGNKIDMTDRQVTVEEAQAWCRDNGNHPYFETSAKDATNVAAAFEEAVRRV 172
> mmu:19349 Rab7, MGC102153, Rab7a; RAB7, member RAS oncogene
family; K07897 Ras-related protein Rab-7A
Length=207
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 97/170 (57%), Gaps = 7/170 (4%)
Query 18 FKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQE 77
K+I++GD GVGKT+L+ +++ +F +Y T+G + + + +WDTAGQE
Sbjct 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68
Query 78 KFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIV-----RVCENIPIVLVGNKVD 132
+F L +Y C +++FDVT+ T++ + +W + + R EN P V++GNK+D
Sbjct 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128
Query 133 VKDRQVKARVIQ--FHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQAS 180
+++RQV + Q + K N+ Y++ SA+ N E+ F +AR Q +
Sbjct 129 LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQET 178
> hsa:7879 RAB7A, FLJ20819, PRO2706, RAB7; RAB7A, member RAS oncogene
family; K07897 Ras-related protein Rab-7A
Length=207
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 97/170 (57%), Gaps = 7/170 (4%)
Query 18 FKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQE 77
K+I++GD GVGKT+L+ +++ +F +Y T+G + + + +WDTAGQE
Sbjct 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68
Query 78 KFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIV-----RVCENIPIVLVGNKVD 132
+F L +Y C +++FDVT+ T++ + +W + + R EN P V++GNK+D
Sbjct 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128
Query 133 VKDRQVKARVIQ--FHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQAS 180
+++RQV + Q + K N+ Y++ SA+ N E+ F +AR Q +
Sbjct 129 LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQET 178
> xla:446841 rab7, MGC80674; RAB7, member RAS oncogene family;
K07897 Ras-related protein Rab-7A
Length=207
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 97/170 (57%), Gaps = 7/170 (4%)
Query 18 FKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQE 77
K+I++GD GVGKT+L+ +++ +F +Y T+G + + + +WDTAGQE
Sbjct 9 LKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68
Query 78 KFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIV-----RVCENIPIVLVGNKVD 132
+F L +Y C ++++DVT+ T++ + +W + + R EN P V++GNKVD
Sbjct 69 RFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKVD 128
Query 133 VKDRQV--KARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQAS 180
+++RQV K + H K N+ Y++ SA+ N E+ F +AR Q +
Sbjct 129 LENRQVTTKRAHVWCHSKNNIPYFETSAKEAINVEQAFQTIARNALKQET 178
> dre:393902 rab7, MGC64058, rab-7, zgc:64058; RAB7, member RAS
oncogene family; K07897 Ras-related protein Rab-7A
Length=207
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 96/170 (56%), Gaps = 7/170 (4%)
Query 18 FKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQE 77
K+I++GD GVGKT+L+ +++ +F +Y T+G + + + +WDTAGQE
Sbjct 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68
Query 78 KFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIV-----RVCENIPIVLVGNKVD 132
+F L +Y C +++FDVT+ T++ + +W + + R EN P V++GNK+D
Sbjct 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128
Query 133 VKDRQVKARVIQ--FHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQAS 180
+++RQV + Q K N+ Y++ SA+ N E+ F +AR Q +
Sbjct 129 LENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQET 178
> hsa:9367 RAB9A, RAB9; RAB9A, member RAS oncogene family; K07899
Ras-related protein Rab-9A
Length=201
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 7/172 (4%)
Query 11 MTEQVPEFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNV 70
M + FK+IL+GDGGVGK++L+ R++T +F+ + T+GVE + + +
Sbjct 1 MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQI 60
Query 71 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVC-----ENIPIV 125
WDTAGQE+F LR +Y C ++ F V +++N+ NW ++ + E+ P V
Sbjct 61 WDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFV 120
Query 126 LVGNKVDVKDRQVKARVIQFHRKKN--LQYYDISARSNYNFEKPFLWLARRL 175
++GNK+D+ +RQV Q + N Y++ SA+ N F RR+
Sbjct 121 ILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRV 172
> dre:431725 wu:fj84g10; zgc:91909; K07897 Ras-related protein
Rab-7A
Length=204
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 95/171 (55%), Gaps = 7/171 (4%)
Query 18 FKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQE 77
K+I++GD GVGKT+L+ +++ +F +Y T+G + + + +WDTAGQE
Sbjct 9 LKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68
Query 78 KFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVC-----ENIPIVLVGNKVD 132
+F L +Y C ++++DVT+ T++ + +W + + EN P V++GNK+D
Sbjct 69 RFQSLGVAFYRGADCCVLVYDVTAPTTFKTLDSWRDEFLIQASTSDPENFPFVVLGNKID 128
Query 133 VKDRQVKARVIQ--FHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQASL 181
+ +RQV + Q K N+ Y++ SA+ N E+ F +AR Q S+
Sbjct 129 LDNRQVSTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQESV 179
> xla:414631 rab9a-a; RAB9A, member RAS oncogene family; K07899
Ras-related protein Rab-9A
Length=201
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 93/172 (54%), Gaps = 7/172 (4%)
Query 11 MTEQVPEFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNV 70
M+ + K+IL+GDGGVGK++L+ R++T +F+ + T+GVE + + +
Sbjct 1 MSTKSSLLKIILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKELEVDGHLVTMQI 60
Query 71 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVC-----ENIPIV 125
WDTAGQE+F LR +Y C ++ F V +++N+ NW ++ + ++ P V
Sbjct 61 WDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLNNWKKEFIYYADVKDPDSFPFV 120
Query 126 LVGNKVDVKDRQVKARVIQFHRKKNLQ--YYDISARSNYNFEKPFLWLARRL 175
++GNK+D+ DRQV Q + N Y++ SA+ N F RR+
Sbjct 121 ILGNKIDITDRQVSVEEAQAWCRDNGNHPYFETSAKDATNVAAAFEEAVRRV 172
> xla:432259 rab30, MGC83515; RAB30, member RAS oncogene family;
K07917 Ras-related protein Rab-30
Length=203
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 93/165 (56%), Gaps = 3/165 (1%)
Query 18 FKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQE 77
FK++L+G+ GVGKT LV+R G F T+GV+ I +WDTAGQE
Sbjct 10 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGEKIKLQIWDTAGQE 69
Query 78 KFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCEN-IPIVLVGNKVDVKDR 136
+F + YY I+ +D+T ++R +P W R+I + + + VLVGNK+D+ +R
Sbjct 70 RFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASSEVITVLVGNKIDLAER 129
Query 137 Q--VKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQA 179
+ + R +F +N+ Y + SA+ + N EK FL LA RL ++A
Sbjct 130 REVSQQRAEEFAGTQNMYYLETSAKESDNVEKLFLDLACRLISEA 174
> dre:449549 zgc:100918; K07897 Ras-related protein Rab-7A
Length=205
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 96/170 (56%), Gaps = 7/170 (4%)
Query 18 FKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQE 77
K+I++GD GVGKT+L+ +++ +F +Y T+G + + + +WDTAGQE
Sbjct 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68
Query 78 KFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIV-----RVCENIPIVLVGNKVD 132
+F L +Y C ++++DVT+ T++ + +W + + R EN P V++GNK+D
Sbjct 69 RFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128
Query 133 VKDRQVKARVIQ--FHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQAS 180
+++RQV + Q K N+ Y++ SA+ N ++ F +AR Q S
Sbjct 129 LENRQVTTKRAQAWCQSKSNIPYFETSAKEAINVDQAFQTIARNALKQES 178
> xla:398835 rab10, MGC68629; RAB10, member RAS oncogene family;
K07903 Ras-related protein Rab-10
Length=200
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 94/158 (59%), Gaps = 3/158 (1%)
Query 18 FKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQE 77
FKL+L+GD GVGKT ++ R F +I T+G++ + I +WDTAGQE
Sbjct 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69
Query 78 KFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDI-VRVCENIPIVLVGNKVDVKDR 136
+F + YY ++++D+T+ ++ NI W R+I E++ +L+GNK D++D+
Sbjct 70 RFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDK 129
Query 137 QV--KARVIQFHRKKNLQYYDISARSNYNFEKPFLWLA 172
+V KA+ Q R+ +++++ SA++N N EK FL LA
Sbjct 130 RVVPKAKGEQIAREHGIRFFETSAKANVNIEKAFLTLA 167
> bbo:BBOV_III007360 17.m10679; Rab1a
Length=213
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 92/161 (57%), Gaps = 3/161 (1%)
Query 18 FKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQE 77
FKL+L+GD GVGK+ ++ R F YI T+GV+ R + +WDTAGQE
Sbjct 13 FKLVLIGDSGVGKSCVLLRFADDTFTDSYITTIGVDFRFRTIEVEGRRVKLQIWDTAGQE 72
Query 78 KFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVC-ENIPIVLVGNKVD-VKD 135
+F + YY I++FD+T ++++ N+P+W +++ + + I +L+GNK D +
Sbjct 73 RFRTITSAYYRGADAIIIVFDITDKLSFENVPSWLQEVEKFAPDGIHKLLIGNKSDQAQA 132
Query 136 RQVKARVIQ-FHRKKNLQYYDISARSNYNFEKPFLWLARRL 175
R V IQ F + Y +ISA+S N E+ F+ +ARRL
Sbjct 133 RDVDPSEIQEFSELHSTPYVEISAKSGSNVEEAFVSVARRL 173
> dre:436839 zgc:92757; K07903 Ras-related protein Rab-10
Length=201
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 94/158 (59%), Gaps = 3/158 (1%)
Query 18 FKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQE 77
FKL+L+GD GVGKT ++ R F +I T+G++ + I +WDTAGQE
Sbjct 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69
Query 78 KFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDI-VRVCENIPIVLVGNKVDVKDR 136
+F + YY ++++D+T+ ++ NI W R+I E++ +L+GNK D++D+
Sbjct 70 RFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDK 129
Query 137 QV--KARVIQFHRKKNLQYYDISARSNYNFEKPFLWLA 172
+V KA+ Q ++ +++++ SA++N N EK FL LA
Sbjct 130 RVVPKAKGEQIAKEHGIRFFETSAKANINIEKAFLTLA 167
> dre:437023 rab30, zgc:100889; RAB30, member RAS oncogene family;
K07917 Ras-related protein Rab-30
Length=201
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 3/165 (1%)
Query 18 FKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQE 77
FK++L+G+ GVGKT LV+R G F T+GV+ + +WDTAGQE
Sbjct 8 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGVKVKLQIWDTAGQE 67
Query 78 KFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCEN-IPIVLVGNKVDVKDR 136
+F + YY I+ +D+T ++R +P W R+I + N + +LVGNK+D+ D+
Sbjct 68 RFRSITQSYYRSANALILTYDITCEDSFRCLPEWLREIEQYANNQVVTILVGNKIDLADK 127
Query 137 Q--VKARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQA 179
+ ++ R +F +++ Y + SA+ + N EK FL LA L +A
Sbjct 128 REVLRQRAEEFADSQSMLYLETSAKESDNVEKLFLDLACELIREA 172
> bbo:BBOV_III000780 17.m07097; Rab1b
Length=221
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 98/169 (57%), Gaps = 8/169 (4%)
Query 18 FKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQE 77
FK+I++GD G GK++L+ R + + Y+ T+GV+ + + I +WDTAGQE
Sbjct 8 FKIIIIGDSGAGKSSLLLRFADDTYSESYMSTIGVDFKIKTVKIDNVTIKLQIWDTAGQE 67
Query 78 KFGGLRDGYYIKGQCAIMMFDVTSRITYRNI-PNWHRDIVRVCE-NIPIVLVGNKVDVKD 135
+F + YY I ++DVTSR+++ ++ W DI + NI +L+GNKVD++D
Sbjct 68 RFRTITSTYYRGAHGIITVYDVTSRVSFESVKKTWLVDIEKYSSANISKLLIGNKVDLED 127
Query 136 RQV----KARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQAS 180
+ +AR +F + N+ Y + SA++ N EK F +AR L ++A+
Sbjct 128 SRAVTYDEAR--EFAEQNNMDYIEASAKTAQNVEKAFESIARALKDKAT 174
> hsa:51209 RAB9B, RAB9L, Rab-9L; RAB9B, member RAS oncogene family;
K07900 Ras-related protein Rab-9B
Length=201
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 89/160 (55%), Gaps = 11/160 (6%)
Query 18 FKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEV--RPLRFSTNFGPIVFNVWDTAG 75
K+IL+GDGGVGK++L+ R++T +F+ + T+GVE R L F + +WDTAG
Sbjct 8 LKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRF--VTLQIWDTAG 65
Query 76 QEKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVC-----ENIPIVLVGNK 130
QE+F LR +Y C ++ F V R ++ N+ NW ++ + E+ P V++GNK
Sbjct 66 QERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNK 125
Query 131 VDVKDRQVKARVIQFHRKKN--LQYYDISARSNYNFEKPF 168
VD +DRQV Q +N Y + SA+ + N F
Sbjct 126 VDKEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAF 165
> cel:C39F7.4 rab-1; RAB family member (rab-1); K07874 Ras-related
protein Rab-1A
Length=205
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 95/164 (57%), Gaps = 3/164 (1%)
Query 18 FKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQE 77
FKL+L+GD GVGK+ L+ R + + YI T+GV+ + + I +WDTAGQE
Sbjct 12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 71
Query 78 KFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVR-VCENIPIVLVGNKVDV-KD 135
+F + YY I+++D+T + T+ N+ W ++I R CEN+ +LVGNK D+
Sbjct 72 RFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCDLTAK 131
Query 136 RQVKARVIQ-FHRKKNLQYYDISARSNYNFEKPFLWLARRLTNQ 178
R V+ + Q + + + + + SA+S+ N E+ FL +A + ++
Sbjct 132 RAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSR 175
> cel:W03C9.3 rab-7; RAB family member (rab-7); K07897 Ras-related
protein Rab-7A
Length=209
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 97/173 (56%), Gaps = 8/173 (4%)
Query 9 LKMTEQVPEFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVF 68
+ T + K+I++GD GVGKT+L+ +++ F +Y T+G + + + +
Sbjct 1 MSGTRKKALLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTL 60
Query 69 NVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIV-----RVCENIP 123
+WDTAGQE+F L +Y C ++ FDVT+ +++++ +W + + R ++ P
Sbjct 61 QIWDTAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFP 120
Query 124 IVLVGNKVDVKD-RQVKARVIQ--FHRKKNLQYYDISARSNYNFEKPFLWLAR 173
VL+GNKVD++ R V ++ Q K N+ YY++SA+ N E FL +AR
Sbjct 121 FVLLGNKVDLESQRAVSSKRAQSWCQTKGNIPYYEVSAKEALNVEAAFLAIAR 173
> mmu:319642 Rab9b, 9330195C02Rik, MGC130383; RAB9B, member RAS
oncogene family; K07900 Ras-related protein Rab-9B
Length=201
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 91/167 (54%), Gaps = 11/167 (6%)
Query 11 MTEQVPEFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEV--RPLRFSTNFGPIVF 68
M+ + K+IL+GDGGVGK++L+ R++T +F+ + T+GVE R L F +
Sbjct 1 MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRF--VTL 58
Query 69 NVWDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVC-----ENIP 123
+WDTAGQE+F LR +Y C ++ F V R ++ N+ NW ++ + ++ P
Sbjct 59 QIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPDHFP 118
Query 124 IVLVGNKVDVKDRQVKARVIQ--FHRKKNLQYYDISARSNYNFEKPF 168
V++GNKVD +DRQV Q N Y + SA+ + N F
Sbjct 119 FVVLGNKVDKEDRQVTTEEAQAWCMENGNYPYLETSAKDDTNVTVAF 165
> dre:751756 rab9a, MGC153391, zgc:153391; RAB9A, member RAS oncogene
family; K07899 Ras-related protein Rab-9A
Length=201
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 90/172 (52%), Gaps = 7/172 (4%)
Query 11 MTEQVPEFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNV 70
M+ + K+IL+GDGGVGK++L+ R++T +F+ T+GVE + + +
Sbjct 1 MSSKSSLLKVILLGDGGVGKSSLMNRYVTNKFDAHLFHTIGVEFLNKDLEVDGRTVTLQI 60
Query 71 WDTAGQEKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVC-----ENIPIV 125
WDTAGQE+F LR +Y C ++ F V ++ N+ NW ++ + E+ P V
Sbjct 61 WDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFHNLVNWKKEFIYYADVKEPESFPFV 120
Query 126 LVGNKVDVKDRQVKARVIQ--FHRKKNLQYYDISARSNYNFEKPFLWLARRL 175
++GNK+DV +RQV + Q Y++ SA+ N F RR+
Sbjct 121 VLGNKLDVSERQVSSEEAQEWCMESGGYPYFETSAKDATNVAVAFEEAVRRV 172
> mmu:19325 Rab10, AW107754; RAB10, member RAS oncogene family;
K07903 Ras-related protein Rab-10
Length=200
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Query 18 FKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQE 77
FKL+L+GD GVGKT ++ R F +I T+G++ + I +WDTAGQE
Sbjct 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69
Query 78 KFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDI-VRVCENIPIVLVGNKVDVKDR 136
+F + YY ++++D+T+ ++ NI W R+I E++ +L+GNK D+ D+
Sbjct 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129
Query 137 QV--KARVIQFHRKKNLQYYDISARSNYNFEKPFLWLA 172
+V K + Q R+ +++++ SA++N N EK FL LA
Sbjct 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
> hsa:10890 RAB10; RAB10, member RAS oncogene family; K07903 Ras-related
protein Rab-10
Length=200
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Query 18 FKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQE 77
FKL+L+GD GVGKT ++ R F +I T+G++ + I +WDTAGQE
Sbjct 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69
Query 78 KFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDI-VRVCENIPIVLVGNKVDVKDR 136
+F + YY ++++D+T+ ++ NI W R+I E++ +L+GNK D+ D+
Sbjct 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129
Query 137 QV--KARVIQFHRKKNLQYYDISARSNYNFEKPFLWLA 172
+V K + Q R+ +++++ SA++N N EK FL LA
Sbjct 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167
> dre:100124616 zgc:171927
Length=210
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 88/161 (54%), Gaps = 3/161 (1%)
Query 18 FKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQE 77
FKL+L+GD GVGK+ L+ R + + YI T+GV+ + + +WDTAGQE
Sbjct 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEMEGKTVKLQIWDTAGQE 68
Query 78 KFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVR-VCENIPIVLVGNKVDVKDR 136
+F + YY I+++DVT + ++ N+ W +I R CEN+ +LVGNK D+ +
Sbjct 69 RFRTITSSYYRGAHGIIIVYDVTEQESFNNVKQWLEEIDRYACENVSKLLVGNKSDLSSK 128
Query 137 QVK--ARVIQFHRKKNLQYYDISARSNYNFEKPFLWLARRL 175
+V ++F + + SA++ N EK FL +A +
Sbjct 129 KVVDFTTAMEFTESLKIPLLETSAKNANNVEKAFLAMASEI 169
> dre:373105 rab13, cb764, hm:zeh0455; RAB13, member RAS oncogene
family; K06109 Ras-related protein Rab-13
Length=200
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 88/159 (55%), Gaps = 3/159 (1%)
Query 18 FKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQE 77
FKL+L+GD GVGKT L+ R F YI T+G++ + + VWDTAGQE
Sbjct 9 FKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKVKLQVWDTAGQE 68
Query 78 KFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVR-VCENIPIVLVGNKVDVKDR 136
+F + YY I+++D+T +Y NI NW + I + +L+GNK D++ +
Sbjct 69 RFKTITTAYYRGAMGIILVYDITDEKSYENIQNWMKSIKENASAGVSRMLLGNKCDIEAK 128
Query 137 QVKARVI--QFHRKKNLQYYDISARSNYNFEKPFLWLAR 173
+ ++ + ++ +++++ SA+S+ N E+ F LAR
Sbjct 129 RKVSKETGEKLAKEHGIRFFETSAKSSINVEESFTSLAR 167
> ath:AT5G39620 AtRABG1 (Arabidopsis Rab GTPase homolog G1); GTP
binding; K07976 Rab family, other
Length=204
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 100/178 (56%), Gaps = 15/178 (8%)
Query 17 EFKLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQ 76
+ K+IL+GD GVGKT+L+KR+ +F++ + T+ V++ ++ +WDTAGQ
Sbjct 5 KLKIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTAGQ 64
Query 77 EKFGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCE-----NIPIVLVGNKV 131
E+F L +Y C ++++DV + T+ +I NWH + ++ P VL+GNK
Sbjct 65 ERFKSLPSRFYRDTDCCVLVYDVNTLKTFESIDNWHDEFIKQANPETPTKFPFVLMGNKT 124
Query 132 DVKDRQVKARVIQ-------FHRKKNLQYYDISARSNYNFEKPFLWLARR-LTNQASL 181
DV + K RV+ K N+ Y++ SA++ N E+ FL +A++ LTN+ +
Sbjct 125 DVNNG--KPRVVAKEIADQWCGSKGNIVYFETSAKAKINVEEAFLEIAKKALTNERQI 180
> xla:446683 rabl2b, MGC83481; RAB, member of RAS oncogene family-like
2B
Length=225
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 82/150 (54%), Gaps = 1/150 (0%)
Query 19 KLILVGDGGVGKTTLVKRHLTGEFEKKYIPTLGVEVRPLRFSTNFGPIVFNVWDTAGQEK 78
K+I +GD VGK+ L++R L F + + T + + + ++ + WDTAGQE+
Sbjct 23 KIICLGDSAVGKSKLMERFLMDGFRPQQLSTFALTLYKYSTCIDGNTVLVDFWDTAGQER 82
Query 79 FGGLRDGYYIKGQCAIMMFDVTSRITYRNIPNWHRDIVRVCENIPIVLVGNKVDVKDRQV 138
F + YY K IM+FDV +ITY+N+ W++++ IP ++V NK+D D +V
Sbjct 83 FHSMHASYYHKAHACIMVFDVQRKITYKNLSKWYQELREYRPEIPCIVVANKIDA-DLRV 141
Query 139 KARVIQFHRKKNLQYYDISARSNYNFEKPF 168
+ F +K NL +Y +SA N K F
Sbjct 142 TQKGFNFAKKHNLPFYFVSAADGTNVVKLF 171
Lambda K H
0.321 0.139 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 7330863480
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40