bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
164,496 sequences; 82,071,388 total letters
Query= Eten_0163_orf1
Length=110
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_018420 pleiotropic regulator 1, putative (EC:2.7.11... 173 1e-43
tpv:TP04_0666 hypothetical protein; K12862 pleiotropic regulat... 155 4e-38
bbo:BBOV_III007650 17.m07667; WD domain, G-beta repeat contain... 152 2e-37
mmu:53317 Plrg1, AA958940, C80566; pleiotropic regulator 1, PR... 124 5e-29
xla:495399 plrg1; pleiotropic regulator 1 (PRL1 homolog); K128... 124 9e-29
xla:495006 hypothetical LOC495006 122 2e-28
hsa:5356 PLRG1, MGC110980, PRL1, PRP46, PRPF46; pleiotropic re... 121 5e-28
dre:100004402 plrg1, MGC174842, MGC55651, MGC86603, wu:fi74f01... 121 5e-28
pfa:PFC0100c regulatory protein, putative; K12862 pleiotropic ... 117 7e-27
cel:D1054.15 tag-135; Temporarily Assigned Gene name family me... 111 5e-25
cpv:cgd7_3960 pleiotropic regulator 1 ; K12862 pleiotropic reg... 101 5e-22
ath:AT4G15900 PRL1; PRL1 (PLEIOTROPIC REGULATORY LOCUS 1); bas... 100 1e-21
ath:AT3G16650 PP1/PP2A phosphatases pleiotropic regulator 2 (P... 99.0 3e-21
sce:YPL151C PRP46, NTC50; Member of the NineTeen Complex (NTC)... 92.8 3e-19
hsa:54554 WDR5B, FLJ11287, MGC49879; WD repeat domain 5B; K149... 49.3 3e-06
dre:393168 smu1, MGC56147, zgc:56147; smu-1 suppressor of mec-... 46.2 2e-05
tpv:TP01_0202 hypothetical protein; K13111 WD40 repeat-contain... 46.2 3e-05
cel:CC4.3 smu-1; Suppressor of Mec and Unc defects family memb... 46.2 3e-05
hsa:9948 WDR1, AIP1, NORI-1; WD repeat domain 1 45.8
mmu:69544 Wdr5b, 2310009C03Rik, AI606931; WD repeat domain 5B;... 45.8 3e-05
mmu:74255 Smu1, 2600001O03Rik, 2610203K23Rik, AB044414, AI8450... 45.4 5e-05
hsa:55234 SMU1, BWD, DKFZp761L0916, FLJ10805, FLJ10870, FLJ119... 45.4 5e-05
xla:431914 smu1, MGC81475; smu-1 suppressor of mec-8 and unc-5... 45.4 5e-05
xla:446809 wdr5-a, MGC80538, big-3, swd3, xwdr5; WD repeat dom... 44.7 7e-05
mmu:140858 Wdr5, 2410008O07Rik, AA408785, AA960360, Big, Big-3... 44.7 8e-05
hsa:11091 WDR5, BIG-3, SWD3; WD repeat domain 5; K14963 COMPAS... 44.7 8e-05
xla:447447 wdr5-b, MGC81485, big-3, swd3, wdr5, xwdr5; WD repe... 44.7 8e-05
dre:406372 wdr5, wu:fk47f04, zgc:56591, zgc:76895; WD repeat d... 44.3 9e-05
mmu:22388 Wdr1, Aip1, D5Wsu185e, rede; WD repeat domain 1 43.5
xla:379913 copb2, MGC53629, wu:fc55e05; coatomer protein compl... 43.5 2e-04
tgo:TGME49_090850 WD-40 repeat protein, putative ; K13111 WD40... 43.1 2e-04
mmu:50797 Copb2, AI256832; coatomer protein complex, subunit b... 42.7 2e-04
hsa:9276 COPB2, beta'-COP; coatomer protein complex, subunit b... 42.7 3e-04
dre:114454 copb2, sb:cb121, wu:fb30f06; coatomer protein compl... 42.0 5e-04
bbo:BBOV_IV005340 23.m06217; WD domain, G-beta repeat containi... 41.6 7e-04
xla:398797 wdr1-b, aip1, wdr1, wdr1a; WD repeat domain 1 41.2
xla:398123 wdr1-a, MGC52751, aip1, wdr1b; WD repeat domain 1 40.8
dre:556760 wdr69, si:dkey-223n17.5, zgc:153626, zgc:153780; WD... 40.4 0.001
pfa:MAL13P1.54 conserved Plasmodium protein, unknown function;... 40.4 0.001
dre:394014 wdr1, MGC55793, wu:fa66e09, zgc:55793, zgc:77547; W... 40.4 0.002
ath:AT1G73720 transducin family protein / WD-40 repeat family ... 40.0 0.002
sce:YBR198C TAF5, TAF90; Taf5p; K03130 transcription initiatio... 39.3 0.003
xla:379734 tbl3, MGC69179; transducin (beta)-like 3; K14555 U3... 38.9 0.004
hsa:10885 WDR3, FLJ12796; WD repeat domain 3; K14556 U3 small ... 38.1 0.007
xla:734280 wdr69, MGC85213; WD repeat domain 69 37.7
dre:100007282 autophagy related 16 like 2-like 37.7 0.010
ath:AT3G49400 transducin family protein / WD-40 repeat family ... 37.7 0.010
sce:YJL112W MDV1, FIS2, GAG3, NET2; Mdv1p 37.4 0.010
cel:K04G11.4 hypothetical protein 37.4 0.011
xla:379514 snrnp40-a, MGC64565, prp8bp, snrnp40, spf38, wdr57;... 37.4 0.011
> tgo:TGME49_018420 pleiotropic regulator 1, putative (EC:2.7.11.7);
K12862 pleiotropic regulator 1
Length=576
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 75/99 (75%), Positives = 87/99 (87%), Gaps = 0/99 (0%)
Query 5 NSIPNCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCA 64
NSI NCCA +++GD S L+ G+NNGQLHFWDW SGYK+ T+QSRVQPGSLESENGIFCCA
Sbjct 473 NSIINCCAIKEDGDSSILIAGTNNGQLHFWDWASGYKFDTIQSRVQPGSLESENGIFCCA 532
Query 65 FDKSETRLITGECDKTIKIWKIDEEATEETHPISWGHKR 103
DKSETRL+TGECDKTIK+WK DEEATEE+HP+ W +R
Sbjct 533 LDKSETRLLTGECDKTIKVWKPDEEATEESHPLQWKPQR 571
Score = 27.7 bits (60), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 11/89 (12%)
Query 22 LVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGECDKTI 81
L G + + WD R+ ++ L + I E +I+G DK +
Sbjct 363 LCSGGRDAVVRVWDMRTKHEIYVLSGH--------QGTIMSLQMQALEPHIISGSQDKMV 414
Query 82 KIWKIDEEATEETHPISWGHKRDRAAVAF 110
++W + + + HK+ A+AF
Sbjct 415 RLWDL---TAGKCSAVLTNHKKSIRAMAF 440
> tpv:TP04_0666 hypothetical protein; K12862 pleiotropic regulator
1
Length=521
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 73/98 (74%), Positives = 81/98 (82%), Gaps = 0/98 (0%)
Query 2 TSLNSIPNCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIF 61
T NSI NC A +D+GD S LV GSN+GQLHFWDW SGYK+QTLQS+VQ GSLESENGIF
Sbjct 415 TGHNSILNCSAIKDDGDSSILVAGSNDGQLHFWDWNSGYKFQTLQSKVQKGSLESENGIF 474
Query 62 CCAFDKSETRLITGECDKTIKIWKIDEEATEETHPISW 99
FDKSE+RLIT ECDKTIKI+K DE ATEETHPI +
Sbjct 475 ALVFDKSESRLITAECDKTIKIYKQDETATEETHPIDY 512
> bbo:BBOV_III007650 17.m07667; WD domain, G-beta repeat containing
protein; K12862 pleiotropic regulator 1
Length=528
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 78/95 (82%), Gaps = 0/95 (0%)
Query 5 NSIPNCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCA 64
NSI NC A +D+G+ S LV GSNNGQLHFWDW +GYK+QTL+S VQ GSLESENGIF CA
Sbjct 425 NSILNCAAIKDDGESSMLVAGSNNGQLHFWDWETGYKFQTLESTVQKGSLESENGIFGCA 484
Query 65 FDKSETRLITGECDKTIKIWKIDEEATEETHPISW 99
FD SETRLIT ECDKT+KIW D +AT ETHP+ W
Sbjct 485 FDMSETRLITAECDKTVKIWIQDPDATPETHPVVW 519
> mmu:53317 Plrg1, AA958940, C80566; pleiotropic regulator 1,
PRL1 homolog (Arabidopsis); K12862 pleiotropic regulator 1
Length=513
Score = 124 bits (312), Expect = 5e-29, Method: Composition-based stats.
Identities = 55/95 (57%), Positives = 73/95 (76%), Gaps = 3/95 (3%)
Query 5 NSIPNCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCA 64
N+I N A +G LV G++NG +H WDWR+GY +Q + + VQPGSL+SE+GIF CA
Sbjct 412 NAIINTLAVNADG---VLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACA 468
Query 65 FDKSETRLITGECDKTIKIWKIDEEATEETHPISW 99
FD+SE+RL+T E DKTIK+++ DE ATEETHP+SW
Sbjct 469 FDRSESRLLTAEADKTIKVYREDETATEETHPVSW 503
Score = 28.5 bits (62), Expect = 4.8, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 8/65 (12%)
Query 22 LVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGECDKTI 81
LV S + WD R+ TL N + +E ++ITG D TI
Sbjct 302 LVTCSRDSTARIWDVRTKASVHTLSGHT--------NAVATVRCQAAEPQIITGSHDTTI 353
Query 82 KIWKI 86
++W +
Sbjct 354 RLWDL 358
> xla:495399 plrg1; pleiotropic regulator 1 (PRL1 homolog); K12862
pleiotropic regulator 1
Length=517
Score = 124 bits (310), Expect = 9e-29, Method: Composition-based stats.
Identities = 55/95 (57%), Positives = 72/95 (75%), Gaps = 3/95 (3%)
Query 5 NSIPNCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCA 64
N+I N A +G LV G++NG +H WDWR+GY +Q + + VQPGSL+SE+GIF C
Sbjct 416 NAIINTLAVNSDG---VLVSGADNGTMHLWDWRTGYNFQRIHAAVQPGSLDSESGIFACT 472
Query 65 FDKSETRLITGECDKTIKIWKIDEEATEETHPISW 99
FD+SE+RLIT E DKTIK+++ DE ATEETHP+SW
Sbjct 473 FDQSESRLITAEADKTIKVYREDETATEETHPVSW 507
> xla:495006 hypothetical LOC495006
Length=517
Score = 122 bits (307), Expect = 2e-28, Method: Composition-based stats.
Identities = 54/95 (56%), Positives = 72/95 (75%), Gaps = 3/95 (3%)
Query 5 NSIPNCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCA 64
N+I N A +G LV G++NG +H WDWR+GY +Q + + VQPGSL+SE+GIF C
Sbjct 416 NAIINTLAVNSDG---VLVSGADNGTMHLWDWRTGYNFQRIHAAVQPGSLDSESGIFACT 472
Query 65 FDKSETRLITGECDKTIKIWKIDEEATEETHPISW 99
FD+SE+RLIT E DKTIK+++ D+ ATEETHP+SW
Sbjct 473 FDQSESRLITAEADKTIKVYREDDTATEETHPVSW 507
Score = 27.7 bits (60), Expect = 8.7, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 8/65 (12%)
Query 22 LVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGECDKTI 81
LV S + WD R+ TL N + +E ++ITG D TI
Sbjct 306 LVTCSRDSTARIWDVRTKASVHTLVGHT--------NAVATVKCQAAEPQIITGSHDTTI 357
Query 82 KIWKI 86
++W +
Sbjct 358 RLWDM 362
> hsa:5356 PLRG1, MGC110980, PRL1, PRP46, PRPF46; pleiotropic
regulator 1 (PRL1 homolog, Arabidopsis); K12862 pleiotropic
regulator 1
Length=505
Score = 121 bits (304), Expect = 5e-28, Method: Composition-based stats.
Identities = 53/95 (55%), Positives = 72/95 (75%), Gaps = 3/95 (3%)
Query 5 NSIPNCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCA 64
N+I N +G LV G++NG +H WDWR+GY +Q + + VQPGSL+SE+GIF CA
Sbjct 404 NAIINTLTVNSDG---VLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACA 460
Query 65 FDKSETRLITGECDKTIKIWKIDEEATEETHPISW 99
FD+SE+RL+T E DKTIK+++ D+ ATEETHP+SW
Sbjct 461 FDQSESRLLTAEADKTIKVYREDDTATEETHPVSW 495
Score = 28.5 bits (62), Expect = 5.2, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 8/65 (12%)
Query 22 LVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGECDKTI 81
LV S + WD R+ TL N + +E ++ITG D TI
Sbjct 294 LVTCSRDSTARIWDVRTKASVHTLSGHT--------NAVATVRCQAAEPQIITGSHDTTI 345
Query 82 KIWKI 86
++W +
Sbjct 346 RLWDL 350
> dre:100004402 plrg1, MGC174842, MGC55651, MGC86603, wu:fi74f01,
zgc:55651, zgc:86603; pleiotropic regulator 1; K12862 pleiotropic
regulator 1
Length=511
Score = 121 bits (304), Expect = 5e-28, Method: Composition-based stats.
Identities = 53/95 (55%), Positives = 72/95 (75%), Gaps = 3/95 (3%)
Query 5 NSIPNCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCA 64
N+I N A +G LV G++NG +H WDWR+GY +Q + + VQPGSL+SE+GIF C
Sbjct 410 NAIINTLAVNSDG---VLVSGADNGTIHMWDWRTGYNFQRIHAAVQPGSLDSESGIFSCV 466
Query 65 FDKSETRLITGECDKTIKIWKIDEEATEETHPISW 99
FD+SE+RLIT E DKTIK++K D+ ATEE+HP++W
Sbjct 467 FDQSESRLITAEADKTIKVYKEDDTATEESHPVNW 501
Score = 28.1 bits (61), Expect = 6.5, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 8/73 (10%)
Query 22 LVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGECDKTI 81
LV S + WD R+ TL N + +E +++TG D TI
Sbjct 300 LVTCSRDATARVWDIRTKANVHTLSGHT--------NTVATVKCQSAEPQVVTGSHDTTI 351
Query 82 KIWKIDEEATEET 94
++W + T T
Sbjct 352 RLWDLVAGKTRAT 364
> pfa:PFC0100c regulatory protein, putative; K12862 pleiotropic
regulator 1
Length=600
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 70/102 (68%), Gaps = 3/102 (2%)
Query 2 TSLNSIPNCCAFRDE---GDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESEN 58
T NSI NC + + D S L++GSNNGQLHF+DW SGYKY TL ++V PG++E EN
Sbjct 492 TGFNSIINCSLIKQDPYFNDSSILILGSNNGQLHFYDWSSGYKYDTLSNKVVPGTVECEN 551
Query 59 GIFCCAFDKSETRLITGECDKTIKIWKIDEEATEETHPISWG 100
AFDKSE+RLIT DK+IKIWK +E+AT E PI W
Sbjct 552 STLSMAFDKSESRLITTHGDKSIKIWKENEDATPENFPIKWN 593
> cel:D1054.15 tag-135; Temporarily Assigned Gene name family
member (tag-135); K12862 pleiotropic regulator 1
Length=494
Score = 111 bits (278), Expect = 5e-25, Method: Composition-based stats.
Identities = 52/95 (54%), Positives = 70/95 (73%), Gaps = 3/95 (3%)
Query 5 NSIPNCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCA 64
N+I N + D+G +V G++NG L FWDWRSG+ +Q +Q++ QPGS+ESE GI+
Sbjct 393 NAIINTLSSNDDG---VVVSGADNGSLCFWDWRSGFCFQKIQTKPQPGSIESEAGIYASC 449
Query 65 FDKSETRLITGECDKTIKIWKIDEEATEETHPISW 99
FDK+ RLIT E DKTIK++K D+EATEE+HPI W
Sbjct 450 FDKTGLRLITAEADKTIKMYKEDDEATEESHPIVW 484
> cpv:cgd7_3960 pleiotropic regulator 1 ; K12862 pleiotropic regulator
1
Length=427
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 61/85 (71%), Gaps = 0/85 (0%)
Query 2 TSLNSIPNCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIF 61
+S SI N R + + S ++ G +NGQLHFWD+ +G Y T+QS +QPGS+E+EN I
Sbjct 337 SSSQSIINTITIRSQENNSIVLAGCDNGQLHFWDYETGTLYDTIQSNIQPGSVEAENSIL 396
Query 62 CCAFDKSETRLITGECDKTIKIWKI 86
C FD++E+ LITGECDKTIKIW +
Sbjct 397 DCKFDRTESVLITGECDKTIKIWNL 421
> ath:AT4G15900 PRL1; PRL1 (PLEIOTROPIC REGULATORY LOCUS 1); basal
transcription repressor/ nucleotide binding / protein binding;
K12862 pleiotropic regulator 1
Length=486
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 68/99 (68%), Gaps = 3/99 (3%)
Query 6 SIPNCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAF 65
+I N A ++G +V G +NG + FWDW+SG+ +Q ++ VQPGSLESE GI+ +
Sbjct 387 TIINAMAVNEDG---VMVTGGDNGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACY 443
Query 66 DKSETRLITGECDKTIKIWKIDEEATEETHPISWGHKRD 104
D + +RL+T E DKTIK+WK DE AT ETHPI++ ++
Sbjct 444 DNTGSRLVTCEADKTIKMWKEDENATPETHPINFKPPKE 482
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 12/86 (13%)
Query 10 CCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDK-S 68
C A D L+ G + WD R+ ++Q +L + C F + +
Sbjct 265 CLALHPTLD--VLLTGGRDSVCRVWDIRT---------KMQIFALSGHDNTVCSVFTRPT 313
Query 69 ETRLITGECDKTIKIWKIDEEATEET 94
+ +++TG D TIK W + T T
Sbjct 314 DPQVVTGSHDTTIKFWDLRYGKTMST 339
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 0/27 (0%)
Query 60 IFCCAFDKSETRLITGECDKTIKIWKI 86
+ AFD S TG D+TIKIW +
Sbjct 179 VRSVAFDPSNEWFCTGSADRTIKIWDV 205
> ath:AT3G16650 PP1/PP2A phosphatases pleiotropic regulator 2
(PRL2)
Length=479
Score = 99.0 bits (245), Expect = 3e-21, Method: Composition-based stats.
Identities = 46/93 (49%), Positives = 66/93 (70%), Gaps = 3/93 (3%)
Query 7 IPNCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFD 66
I N A ++G +V G + G L FWDW+SG+ +Q ++ VQPGSLESE GI+ +D
Sbjct 381 IINAVAVNEDG---VMVTGGDKGGLWFWDWKSGHNFQRAETIVQPGSLESEAGIYAACYD 437
Query 67 KSETRLITGECDKTIKIWKIDEEATEETHPISW 99
++ +RL+T E DKTIK+WK DE+AT ETHP+++
Sbjct 438 QTGSRLVTCEGDKTIKMWKEDEDATPETHPLNF 470
Score = 29.3 bits (64), Expect = 2.9, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 9/53 (16%)
Query 35 DWRSGYK-YQTLQSRVQPGSLESENGIFCCAFDKSETRLITGECDKTIKIWKI 86
+W + +K Y+ LQ + G + S AFD S TG D+TIKIW +
Sbjct 155 EWHAPWKNYRVLQGHL--GWVRS------VAFDPSNEWFCTGSADRTIKIWDV 199
> sce:YPL151C PRP46, NTC50; Member of the NineTeen Complex (NTC)
that contains Prp19p and stabilizes U6 snRNA in catalytic
forms of the spliceosome containing U2, U5, and U6 snRNAs;
K12862 pleiotropic regulator 1
Length=451
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query 22 LVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGECDKTI 81
L G +NG L F+D++SG+KYQ+L +R GSLE E + C FDK+ RLITGE DK+I
Sbjct 364 LFAGGDNGVLSFYDYKSGHKYQSLATREMVGSLEGERSVLCSTFDKTGLRLITGEADKSI 423
Query 82 KIWKIDEEATEETHP-ISW 99
KIWK DE AT+E+ P ++W
Sbjct 424 KIWKQDETATKESEPGLAW 442
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 8/78 (10%)
Query 11 CAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSET 70
C D D + GSN+ + WD +G TL V + A
Sbjct 144 CVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMT--------VRDVAVSDRHP 195
Query 71 RLITGECDKTIKIWKIDE 88
L + DKT+K W +++
Sbjct 196 YLFSVSEDKTVKCWDLEK 213
> hsa:54554 WDR5B, FLJ11287, MGC49879; WD repeat domain 5B; K14963
COMPASS component SWD3
Length=330
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query 18 DRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGEC 77
D S LV S++ L WD RSG +TL+ N +FCC F+ +I+G
Sbjct 94 DSSRLVSASDDKTLKLWDVRSGKCLKTLKGH--------SNYVFCCNFNPPSNLIISGSF 145
Query 78 DKTIKIWKI 86
D+T+KIW++
Sbjct 146 DETVKIWEV 154
> dre:393168 smu1, MGC56147, zgc:56147; smu-1 suppressor of mec-8
and unc-52 homolog (C. elegans); K13111 WD40 repeat-containing
protein SMU1
Length=513
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query 10 CCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSE 69
C F +G LV GS +G + W++ +G + L+ + Q + ++ + C +F +
Sbjct 219 CARFSPDGQY--LVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMSFSRDT 276
Query 70 TRLITGECDKTIKIWKI 86
L TG D IK+WKI
Sbjct 277 EMLATGAQDGKIKVWKI 293
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 15/77 (19%)
Query 10 CCAFRDEGDRSSLVVGSNNGQLHFWDWRSGY---KYQTLQSRVQPGSLESENGIFCCAFD 66
C +F D L G+ +G++ W +SG +Y+ S+ G+ C +F
Sbjct 269 CMSF--SRDTEMLATGAQDGKIKVWKIQSGQCLRRYERAHSK----------GVTCLSFS 316
Query 67 KSETRLITGECDKTIKI 83
K T++++ D+TI+I
Sbjct 317 KDSTQILSASFDQTIRI 333
> tpv:TP01_0202 hypothetical protein; K13111 WD40 repeat-containing
protein SMU1
Length=526
Score = 46.2 bits (108), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query 5 NSIPNCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCA 64
NS P C F G L+ GS++G + W+W G L + + E I C A
Sbjct 223 NSHPECVVFTPNG--QYLISGSSDGFIEVWNWSLGVLDTELSYQANDHFMLHETLITCLA 280
Query 65 FDKSETRLITGECDKTIKIWKID 87
+ L +G+ IKIWKID
Sbjct 281 VSRDSEVLASGDQKGNIKIWKID 303
> cel:CC4.3 smu-1; Suppressor of Mec and Unc defects family member
(smu-1); K13111 WD40 repeat-containing protein SMU1
Length=510
Score = 46.2 bits (108), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query 3 SLNSIPNCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFC 62
S S P F D + LV GS +G + W++ +G + L+ + Q + + + C
Sbjct 212 STKSYPESAVFSP--DANYLVSGSKDGFIEVWNYMNGKLRKDLKYQAQDNLMMMDAAVRC 269
Query 63 CAFDKSETRLITGECDKTIKIWKID 87
+F + L TG D IK+WK++
Sbjct 270 ISFSRDSEMLATGSIDGKIKVWKVE 294
> hsa:9948 WDR1, AIP1, NORI-1; WD repeat domain 1
Length=466
Score = 45.8 bits (107), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query 9 NCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKS 68
NC F +G+R S +GQ++ +D ++G K L GS + GI+ ++
Sbjct 53 NCVRFSPDGNR--FATASADGQIYIYDGKTGEKVCALG-----GSKAHDGGIYAISWSPD 105
Query 69 ETRLITGECDKTIKIWKIDEEATEETHPI 97
T L++ DKT KIW + + T P+
Sbjct 106 STHLLSASGDKTSKIWDVSVNSVVSTFPM 134
> mmu:69544 Wdr5b, 2310009C03Rik, AI606931; WD repeat domain 5B;
K14963 COMPASS component SWD3
Length=328
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query 18 DRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGEC 77
D S LV S++ L WD RSG +TL+ + +FCC F+ +++G
Sbjct 92 DSSRLVSASDDKTLKVWDMRSGKCLKTLKGH--------SDFVFCCDFNPPSNLIVSGSF 143
Query 78 DKTIKIWKI 86
D+++KIW++
Sbjct 144 DESVKIWEV 152
> mmu:74255 Smu1, 2600001O03Rik, 2610203K23Rik, AB044414, AI845086,
AW556129, Bwd; smu-1 suppressor of mec-8 and unc-52 homolog
(C. elegans); K13111 WD40 repeat-containing protein SMU1
Length=513
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query 10 CCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSE 69
C F +G LV GS +G + W++ +G + L+ + Q + ++ + C F +
Sbjct 219 CARFSPDGQY--LVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDT 276
Query 70 TRLITGECDKTIKIWKI 86
L TG D IK+WKI
Sbjct 277 EMLATGAQDGKIKVWKI 293
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query 18 DRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGEC 77
D L G+ +G++ W +SG Q L+ + S G+ C +F K +++++
Sbjct 275 DTEMLATGAQDGKIKVWKIQSG---QCLRRFERAHS----KGVTCLSFSKDSSQILSASF 327
Query 78 DKTIKI 83
D+TI+I
Sbjct 328 DQTIRI 333
> hsa:55234 SMU1, BWD, DKFZp761L0916, FLJ10805, FLJ10870, FLJ11970,
MGC117363, RP11-54K16.3, SMU-1, fSAP57; smu-1 suppressor
of mec-8 and unc-52 homolog (C. elegans); K13111 WD40 repeat-containing
protein SMU1
Length=513
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query 10 CCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSE 69
C F +G LV GS +G + W++ +G + L+ + Q + ++ + C F +
Sbjct 219 CARFSPDGQY--LVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDT 276
Query 70 TRLITGECDKTIKIWKI 86
L TG D IK+WKI
Sbjct 277 EMLATGAQDGKIKVWKI 293
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query 18 DRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGEC 77
D L G+ +G++ W +SG Q L+ + S G+ C +F K +++++
Sbjct 275 DTEMLATGAQDGKIKVWKIQSG---QCLRRFERAHS----KGVTCLSFSKDSSQILSASF 327
Query 78 DKTIKI 83
D+TI+I
Sbjct 328 DQTIRI 333
> xla:431914 smu1, MGC81475; smu-1 suppressor of mec-8 and unc-52
homolog; K13111 WD40 repeat-containing protein SMU1
Length=513
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query 10 CCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSE 69
C F +G LV GS +G + W++ +G + L+ + Q + ++ + C F +
Sbjct 219 CARFSPDGQY--LVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDT 276
Query 70 TRLITGECDKTIKIWKI 86
L TG D IK+WKI
Sbjct 277 EMLATGAQDGKIKVWKI 293
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query 18 DRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGEC 77
D L G+ +G++ W +SG Q L+ + S G+ C +F K +++++
Sbjct 275 DTEMLATGAQDGKIKVWKIQSG---QCLRRFERAHS----KGVTCLSFSKDSSQILSASF 327
Query 78 DKTIKI 83
D+TI+I
Sbjct 328 DQTIRI 333
> xla:446809 wdr5-a, MGC80538, big-3, swd3, xwdr5; WD repeat domain
5; K14963 COMPASS component SWD3
Length=334
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query 18 DRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGEC 77
D + LV S++ L WD SG +TL+ N +FCC F+ +++G
Sbjct 98 DSNLLVSASDDKTLKIWDISSGKCLKTLKGH--------SNYVFCCNFNPQSNLIVSGSF 149
Query 78 DKTIKIWKIDEEATEETHPISWGHKRDRAAVAF 110
D++++IW + +T P H +AV F
Sbjct 150 DESVRIWDVKTGKCLKTLP---AHSDPVSAVHF 179
> mmu:140858 Wdr5, 2410008O07Rik, AA408785, AA960360, Big, Big-3;
WD repeat domain 5; K14963 COMPASS component SWD3
Length=334
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query 18 DRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGEC 77
D + LV S++ L WD SG +TL+ N +FCC F+ +++G
Sbjct 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGH--------SNYVFCCNFNPQSNLIVSGSF 149
Query 78 DKTIKIWKIDEEATEETHPISWGHKRDRAAVAF 110
D++++IW + +T P H +AV F
Sbjct 150 DESVRIWDVKTGKCLKTLP---AHSDPVSAVHF 179
> hsa:11091 WDR5, BIG-3, SWD3; WD repeat domain 5; K14963 COMPASS
component SWD3
Length=334
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query 18 DRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGEC 77
D + LV S++ L WD SG +TL+ N +FCC F+ +++G
Sbjct 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGH--------SNYVFCCNFNPQSNLIVSGSF 149
Query 78 DKTIKIWKIDEEATEETHPISWGHKRDRAAVAF 110
D++++IW + +T P H +AV F
Sbjct 150 DESVRIWDVKTGKCLKTLP---AHSDPVSAVHF 179
> xla:447447 wdr5-b, MGC81485, big-3, swd3, wdr5, xwdr5; WD repeat
domain 5; K14963 COMPASS component SWD3
Length=334
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query 18 DRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGEC 77
D + LV S++ L WD SG +TL+ N +FCC F+ +++G
Sbjct 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGH--------SNYVFCCNFNPQSNLIVSGSF 149
Query 78 DKTIKIWKIDEEATEETHPISWGHKRDRAAVAF 110
D++++IW + +T P H +AV F
Sbjct 150 DESVRIWDVKTGKCLKTLP---AHSDPVSAVHF 179
> dre:406372 wdr5, wu:fk47f04, zgc:56591, zgc:76895; WD repeat
domain 5; K14963 COMPASS component SWD3
Length=334
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query 18 DRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGEC 77
D + LV S++ L WD SG +TL+ N +FCC F+ +++G
Sbjct 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGH--------SNYVFCCNFNPQSNLIVSGSF 149
Query 78 DKTIKIWKIDEEATEETHPISWGHKRDRAAVAF 110
D++++IW + +T P H +AV F
Sbjct 150 DESVRIWDVKTGKCLKTLP---AHSDPVSAVHF 179
> mmu:22388 Wdr1, Aip1, D5Wsu185e, rede; WD repeat domain 1
Length=606
Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query 9 NCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTL-QSRVQPGSLESENGIFCCAFDK 67
NC F +G+R S +GQ+ +D ++G K L +S+ G GI+ ++
Sbjct 193 NCVRFSPDGNR--FATASADGQIFIYDGKTGEKVCALGESKAHDG------GIYAISWSP 244
Query 68 SETRLITGECDKTIKIWKIDEEATEETHPI 97
T L++ DKT KIW ++ + T P+
Sbjct 245 DSTHLLSASGDKTSKIWDVNVNSVVSTFPM 274
> xla:379913 copb2, MGC53629, wu:fc55e05; coatomer protein complex,
subunit beta 2 (beta prime)
Length=915
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query 9 NCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKS 68
NC + GD+ L+ G+++ + WD+++ QTL+ Q + C +F
Sbjct 189 NCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQ--------NVSCVSFHPE 240
Query 69 ETRLITGECDKTIKIWKIDEEATEETHPISWGHKR 103
+ITG D T++IW E T +++G +R
Sbjct 241 LPIIITGSEDGTVRIWHSSTYRLEST--LNYGMER 273
> tgo:TGME49_090850 WD-40 repeat protein, putative ; K13111 WD40
repeat-containing protein SMU1
Length=521
Score = 43.1 bits (100), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query 6 SIPNCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAF 65
S P C AF +G LV GS +G + W+W +G + L + + + E+ + F
Sbjct 216 SHPECAAFSPDGHH--LVSGSIDGFVEVWEWTTGQLNKELAYQKEDALMMHESAVVAVEF 273
Query 66 DKSETRLITGECDKTIKIW 84
+ L TG D +K+W
Sbjct 274 SRDSEVLATGSQDGQLKVW 292
Score = 28.5 bits (62), Expect = 5.1, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Query 18 DRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGEC 77
D L GS +GQL W +G + R G++ S +F K T L+T
Sbjct 276 DSEVLATGSQDGQLKVWIVATGQCARKF-DRAHDGAITS------ISFSKDNTHLLTSSF 328
Query 78 DKTIKI 83
D T +I
Sbjct 329 DTTARI 334
> mmu:50797 Copb2, AI256832; coatomer protein complex, subunit
beta 2 (beta prime)
Length=905
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query 9 NCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKS 68
NC + GD+ L+ G+++ + WD+++ QTL+ Q + C +F
Sbjct 189 NCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQ--------NVSCASFHPE 240
Query 69 ETRLITGECDKTIKIWKIDEEATEETHPISWGHKR 103
+ITG D T++IW E T +++G +R
Sbjct 241 LPIIITGSEDGTVRIWHSSTYRLEST--LNYGMER 273
> hsa:9276 COPB2, beta'-COP; coatomer protein complex, subunit
beta 2 (beta prime)
Length=906
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query 9 NCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKS 68
NC + GD+ L+ G+++ + WD+++ QTL+ Q + C +F
Sbjct 189 NCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQ--------NVSCASFHPE 240
Query 69 ETRLITGECDKTIKIWKIDEEATEETHPISWGHKR 103
+ITG D T++IW E T +++G +R
Sbjct 241 LPIIITGSEDGTVRIWHSSTYRLEST--LNYGMER 273
> dre:114454 copb2, sb:cb121, wu:fb30f06; coatomer protein complex,
subunit beta 2
Length=934
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query 9 NCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKS 68
NC + GD+ L+ G+++ + WD+++ QTL+ Q + C F
Sbjct 189 NCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQ--------NVSCVNFHPE 240
Query 69 ETRLITGECDKTIKIWKIDEEATEETHPISWGHKR 103
+ITG D T++IW E T +++G +R
Sbjct 241 LPIIITGSEDGTVRIWHSSTYRLEST--LNYGMER 273
> bbo:BBOV_IV005340 23.m06217; WD domain, G-beta repeat containing
protein; K13111 WD40 repeat-containing protein SMU1
Length=533
Score = 41.6 bits (96), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query 5 NSIPNCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCA 64
+S P C F G L+ GS++G + W+W SG L+ + + + I A
Sbjct 225 SSHPECVVFTPSG--QYLISGSSDGFIEVWNWHSGQLDLDLEYQKNDRFMLHDTLIVSLA 282
Query 65 FDKSETRLITGECDKTIKIWKI 86
+ L +G+ D IKIWKI
Sbjct 283 VSRDSEILASGDKDGNIKIWKI 304
Score = 29.6 bits (65), Expect = 2.6, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query 5 NSIPNCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGS 53
+SI N + +G++ ++ GS++G + WD R+G ++ + PGS
Sbjct 360 HSIVNAAIYSYDGNK--VITGSSDGYIKVWDSRTGDLLKSFLAYTGPGS 406
> xla:398797 wdr1-b, aip1, wdr1, wdr1a; WD repeat domain 1
Length=607
Score = 41.2 bits (95), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query 9 NCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKS 68
NC F +G R L +GQ+ +D ++G K +L GS + GI+ ++
Sbjct 193 NCVRFSPDGSR--LASAGADGQIFLYDGKTGEKVCSLG-----GSKAHDGGIYAVSWSPD 245
Query 69 ETRLITGECDKTIKIWKI 86
T+L++ DKT KIW +
Sbjct 246 GTQLLSASGDKTAKIWDV 263
Score = 29.3 bits (64), Expect = 3.4, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query 11 CAFRDEGD-RSSLVVGSNNGQLHFWDWRSG----YKYQTLQSRVQPGSLESENGIFCCAF 65
C D+ D RS++ GS++G +++WD +G + + ++V L+ + + C+
Sbjct 325 CMTVDKSDGRSTIYTGSHDGHINYWDAETGENNTFTGKGHTNQVSSMDLDGSSQLITCSM 384
Query 66 DKS 68
D +
Sbjct 385 DDT 387
> xla:398123 wdr1-a, MGC52751, aip1, wdr1b; WD repeat domain 1
Length=608
Score = 40.8 bits (94), Expect = 0.001, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query 9 NCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKS 68
NC F +G S L +GQ+ +D ++G K +L GS + GI+ ++
Sbjct 193 NCVRFSPDG--SKLASAGADGQIFLYDGKTGEKVCSLG-----GSKAHDGGIYAVSWSPD 245
Query 69 ETRLITGECDKTIKIWKI 86
T+L++ DKT KIW +
Sbjct 246 GTQLLSASGDKTTKIWDV 263
Score = 30.4 bits (67), Expect = 1.5, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query 5 NSIPNCCAFRDEGDRSSLVVGSNNGQLHFWDWRSG----YKYQTLQSRVQPGSLESENGI 60
N C + RS++ GS++G +++WD +G + + ++V L+ N +
Sbjct 320 NKSIQCMTVNNSDGRSTIYTGSHDGHINYWDAETGENDTFTGKGHTNQVSSMDLDGCNQL 379
Query 61 FCCAFDKS 68
C+ D +
Sbjct 380 ITCSMDDT 387
> dre:556760 wdr69, si:dkey-223n17.5, zgc:153626, zgc:153780;
WD repeat domain 69
Length=418
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 11/76 (14%)
Query 35 DWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGECDKTIKIWKIDEEATEET 94
D R Y ++ LQ+ + P + AF+KS + ITG D+T KIW D + EE
Sbjct 78 DERKFYLFRALQAHILP--------LTNVAFNKSGSCFITGSYDRTCKIW--DTASGEEL 127
Query 95 HPISWGHKRDRAAVAF 110
H + GH+ A+AF
Sbjct 128 HTLE-GHRNVVYAIAF 142
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 15/102 (14%)
Query 10 CCAFRDEGDRSSLVV-GSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKS 68
C AF + S+LV GS + WD SG + TL I F+ +
Sbjct 182 CLAFNPQ---STLVATGSMDTTAKLWDVESGEEVSTLAGHFAE--------IISLCFNTT 230
Query 69 ETRLITGECDKTIKIWKIDEEATEETHPISWGHKRDRAAVAF 110
RL+TG D T +W D + + H +S GH+ + + V F
Sbjct 231 GDRLVTGSFDHTAILW--DVPSGRKVHVLS-GHRGEISCVQF 269
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 51/134 (38%), Gaps = 40/134 (29%)
Query 12 AFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQS----------------RVQPGSLE 55
AF G S + GS + WD SG + TL+ +V GS +
Sbjct 99 AFNKSG--SCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFD 156
Query 56 -------SENG------------IFCCAFDKSETRLITGECDKTIKIWKIDEEATEETHP 96
+E G I C AF+ T + TG D T K+W D E+ EE
Sbjct 157 KTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLW--DVESGEEVST 214
Query 97 ISWGHKRDRAAVAF 110
++ GH + ++ F
Sbjct 215 LA-GHFAEIISLCF 227
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 10/72 (13%)
Query 13 FRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRL 72
F GDR LV GS + WD SG K L I C F+ + +
Sbjct 227 FNTTGDR--LVTGSFDHTAILWDVPSGRKVHVLSGH--------RGEISCVQFNWDCSLI 276
Query 73 ITGECDKTIKIW 84
T DK+ K+W
Sbjct 277 ATASLDKSCKVW 288
> pfa:MAL13P1.54 conserved Plasmodium protein, unknown function;
K13111 WD40 repeat-containing protein SMU1
Length=527
Score = 40.4 bits (93), Expect = 0.001, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query 10 CCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSE 69
CC D L+ GS++G + W+W +G L+ + Q + +N I K +
Sbjct 224 CCISSYNND--YLITGSSDGFIEIWNWITGELNLDLEYQKQNNLMIHDNPIVTLCISKDD 281
Query 70 TRLITGECDKTIKIWKI 86
L++G+ IKIW+I
Sbjct 282 EILLSGDSKGLIKIWRI 298
> dre:394014 wdr1, MGC55793, wu:fa66e09, zgc:55793, zgc:77547;
WD repeat domain 1
Length=606
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query 9 NCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKS 68
NC F +G R + +GQ+ +D ++G K +L G + GI+ ++
Sbjct 193 NCVRFSPDGSRYA--SAGADGQIFLYDGKTGEKLSSLG-----GEKAHDGGIYAVSWSPD 245
Query 69 ETRLITGECDKTIKIWKI 86
T+LI+ D+T+K+W +
Sbjct 246 STQLISASGDRTVKLWDV 263
Score = 27.7 bits (60), Expect = 9.0, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 0/30 (0%)
Query 10 CCAFRDEGDRSSLVVGSNNGQLHFWDWRSG 39
C R+S+ GS++G +++WD SG
Sbjct 325 CVTVHKADGRTSIYSGSHDGHINYWDAESG 354
> ath:AT1G73720 transducin family protein / WD-40 repeat family
protein; K13111 WD40 repeat-containing protein SMU1
Length=511
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query 10 CCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSE 69
C F +G L S +G + WD+ SG + LQ + + ++ + C F +
Sbjct 218 CARFSPDG--QFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDS 275
Query 70 TRLITGECDKTIKIWKI 86
L +G D IKIW+I
Sbjct 276 EMLASGSQDGKIKIWRI 292
> sce:YBR198C TAF5, TAF90; Taf5p; K03130 transcription initiation
factor TFIID subunit 5
Length=798
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query 22 LVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGECDKTI 81
L GS +G ++ WD +G + + ++ +N I+ ++ K LI+G D T+
Sbjct 666 LSTGSEDGIINVWDIGTGKRLKQMRG-------HGKNAIYSLSYSKEGNVLISGGADHTV 718
Query 82 KIWKIDEEATEET 94
++W + + TE +
Sbjct 719 RVWDLKKATTEPS 731
> xla:379734 tbl3, MGC69179; transducin (beta)-like 3; K14555
U3 small nucleolar RNA-associated protein 13
Length=831
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 9/79 (11%)
Query 9 NCCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQS-RVQPGSLESENGIFCCAFDK 67
+ +F D LV S L WDWR G +T ++ P S FD
Sbjct 65 DITSFALSPDDEILVTASRALLLKQWDWRQGQCSRTWKAIHTAPVS--------TMTFDP 116
Query 68 SETRLITGECDKTIKIWKI 86
+ T L TG CD TIKIW +
Sbjct 117 TSTLLATGGCDSTIKIWDV 135
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 15/81 (18%)
Query 20 SSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGECDK 79
+ L+ ++G L W +S +TL + E+ ++ ++ + L+TG D
Sbjct 586 AQLLTSGSDGLLKLWTIKSNECVKTLDTH--------EDKVWGLHCNREDDALVTGSADS 637
Query 80 TIKIWK-------IDEEATEE 93
TI +WK +E+A EE
Sbjct 638 TIILWKDVTETELAEEQAKEE 658
> hsa:10885 WDR3, FLJ12796; WD repeat domain 3; K14556 U3 small
nucleolar RNA-associated protein 12
Length=943
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 13/88 (14%)
Query 10 CCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSE 69
C+F GDR +V+G+ G+L +D SG +T+ + + ++ + +
Sbjct 458 LCSFFVPGDRQ-VVIGTKTGKLQLYDLASGNLLETIDAH--------DGALWSMSLSPDQ 508
Query 70 TRLITGECDKTIKIWKI----DEEATEE 93
+TG DK++K W DE +T++
Sbjct 509 RGFVTGGADKSVKFWDFELVKDENSTQK 536
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query 18 DRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRV---QPGSLESENGIFCCAFDKSETRLIT 74
D+ V G + + FWD+ + Q R+ Q +L+ + + C ++ ++ L
Sbjct 507 DQRGFVTGGADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAV 566
Query 75 GECDKTIKIWKIDEEATEETHPISWGHK 102
D T+KI+ +D T + +GHK
Sbjct 567 SLLDCTVKIFYVD---TLKFFLSLYGHK 591
> xla:734280 wdr69, MGC85213; WD repeat domain 69
Length=415
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 11/76 (14%)
Query 35 DWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGECDKTIKIWKIDEEATEET 94
D R Y ++ L++ + P + AF+KS + ITG D+T K+W D + EE
Sbjct 78 DSRQFYLFKVLRAHILP--------LTNVAFNKSGSSFITGSYDRTCKVW--DTASGEEL 127
Query 95 HPISWGHKRDRAAVAF 110
H + GH+ A+ F
Sbjct 128 HTLE-GHRNVVYAIQF 142
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query 13 FRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRL 72
F +G+R +V S++ WD +G Q L+ + IF CAF+ +
Sbjct 353 FNAQGNR--IVTASSDKTSRLWDPHTGECLQVLKGHT--------DEIFSCAFNYEGNTI 402
Query 73 ITGECDKTIKIWK 85
ITG D T +IW+
Sbjct 403 ITGSKDNTCRIWR 415
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 10/77 (12%)
Query 10 CCAFRDEGDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSE 69
C F + + + GS + WD +SG + TL I +F+ +
Sbjct 182 CLVFNPQS--TLIATGSMDTTAKLWDIQSGEEALTLSGHAAE--------IISLSFNTTG 231
Query 70 TRLITGECDKTIKIWKI 86
RLITG D T+ +W+I
Sbjct 232 DRLITGSFDHTVSVWEI 248
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 13/94 (13%)
Query 17 GDRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGE 76
GD+ + GS + W +G Y T + I C F+ T + TG
Sbjct 147 GDK--IATGSFDKTCKLWSAETGKCYHTFRGHTAE--------IVCLVFNPQSTLIATGS 196
Query 77 CDKTIKIWKIDEEATEETHPISWGHKRDRAAVAF 110
D T K+W I ++ EE +S GH + +++F
Sbjct 197 MDTTAKLWDI--QSGEEALTLS-GHAAEIISLSF 227
> dre:100007282 autophagy related 16 like 2-like
Length=588
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query 22 LVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESEN-GIFCCAFDKSETRLITGECDKT 80
L G + + WD +G +LQ+R G+L+ N GI FD + TR++ DK+
Sbjct 318 LATGGTDRVIKLWDIEAG----SLQNR---GTLDGSNEGITSIEFDPTGTRILAASYDKS 370
Query 81 IKIWKIDEEATEETHPISWGHKRDRAAVAF 110
W++++ + T GH R A F
Sbjct 371 ALFWRLEDSVPKVTLT---GHSRKVTAARF 397
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 0/35 (0%)
Query 60 IFCCAFDKSETRLITGECDKTIKIWKIDEEATEET 94
+ F S+ +++TG D+T+KIW + A +T
Sbjct 392 VTAARFKYSQRQVVTGSADRTVKIWDLQRAACIQT 426
> ath:AT3G49400 transducin family protein / WD-40 repeat family
protein
Length=892
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 13/83 (15%)
Query 20 SSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQP-----GSLESEN--------GIFCCAFD 66
S L +GS +G + W + Y +S V P +++ + GIF C
Sbjct 280 SLLAIGSKSGSVSIWKVHAPECYHIERSNVSPMVELTAIVQTHSSWVSTMSWGIFGCDSS 339
Query 67 KSETRLITGECDKTIKIWKIDEE 89
+ L+TG CD ++KIW ++E
Sbjct 340 NPQVVLVTGSCDGSVKIWMSNKE 362
> sce:YJL112W MDV1, FIS2, GAG3, NET2; Mdv1p
Length=714
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 10/67 (14%)
Query 20 SSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGECDK 79
++L G+ +G + WD RSG +TL+ + I FD + L+TG D+
Sbjct 577 AALATGTKDGVVRLWDLRSGKVIRTLKGHT--------DAITSLKFDSA--CLVTGSYDR 626
Query 80 TIKIWKI 86
T++IW +
Sbjct 627 TVRIWDL 633
> cel:K04G11.4 hypothetical protein
Length=395
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 11/93 (11%)
Query 18 DRSSLVVGSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGEC 77
D +V S++ + +D SG +TL+ N +FCC F+ S T + +G
Sbjct 159 DSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHT--------NYVFCCCFNPSGTLIASGSF 210
Query 78 DKTIKIWKIDEEATEETHPISWGHKRDRAAVAF 110
D+TI+IW T + P GH+ ++V F
Sbjct 211 DETIRIWCARNGNTIFSIP---GHEDPVSSVCF 240
> xla:379514 snrnp40-a, MGC64565, prp8bp, snrnp40, spf38, wdr57;
small nuclear ribonucleoprotein 40kDa (U5)
Length=337
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 9/70 (12%)
Query 25 GSNNGQLHFWDWRSGYKYQTLQSRVQPGSLESENGIFCCAFDKSETRLITGECDKTIKIW 84
GS++G + WD+R QT Q+ Q + F+ + ++I+G D IK+W
Sbjct 150 GSDDGTVKLWDFRKKAAVQTFQNTYQ---------VLSVTFNDTSDQIISGGIDNDIKVW 200
Query 85 KIDEEATEET 94
+ + T
Sbjct 201 DLRQNKLMYT 210
Lambda K H
0.317 0.133 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2067351240
Database: egene_temp_file_orthology_annotation_similarity_blast_database_866
Posted date: Sep 17, 2011 2:57 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40