bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_8667_orf2
Length=56
Score E
Sequences producing significant alignments: (Bits) Value
7293863 36.2 0.014
7297446 35.8 0.020
CE27556 31.6 0.42
CE20426 31.2 0.51
Hs4557014 30.0 0.97
SPCC757.07c 29.3 1.9
CE20305 29.3 2.1
YBL079w 27.7 6.2
> 7293863
Length=506
Score = 36.2 bits (82), Expect = 0.014, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 0/48 (0%)
Query 3 REALIGNIVDHLKHADRHLQERQVKLFYRADKDYGLRVARGLGLPDSA 50
++ L+ NI HL +A + LQER VK F + D+G + L L S+
Sbjct 457 KKRLVQNIAGHLSNASQFLQERAVKNFTQVHADFGRMLTEELNLAKSS 504
> 7297446
Length=506
Score = 35.8 bits (81), Expect = 0.020, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 0/42 (0%)
Query 3 REALIGNIVDHLKHADRHLQERQVKLFYRADKDYGLRVARGL 44
R+ L+ N+ +HL A + LQER VKLF D+G + L
Sbjct 457 RKRLVRNLSEHLTEASQFLQERAVKLFTMVHSDFGRLMTEAL 498
> CE27556
Length=901
Score = 31.6 bits (70), Expect = 0.42, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 0/39 (0%)
Query 6 LIGNIVDHLKHADRHLQERQVKLFYRADKDYGLRVARGL 44
L G VD + D L RQV +FYRA + L++ + L
Sbjct 579 LSGQQVDQMSDHDLELVIRQVTVFYRASPRHKLKIVKAL 617
> CE20426
Length=705
Score = 31.2 bits (69), Expect = 0.51, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 0/39 (0%)
Query 6 LIGNIVDHLKHADRHLQERQVKLFYRADKDYGLRVARGL 44
L G VD + D L RQV +FYRA + L++ + L
Sbjct 579 LSGQQVDQMSDHDLELVIRQVTVFYRASPRHKLKIVKAL 617
> Hs4557014
Length=527
Score = 30.0 bits (66), Expect = 0.97, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 0/37 (0%)
Query 1 DDREALIGNIVDHLKHADRHLQERQVKLFYRADKDYG 37
+ R+ L NI HLK A +Q++ VK F DYG
Sbjct 454 EQRKRLCENIAGHLKDAQIFIQKKAVKNFTEVHPDYG 490
> SPCC757.07c
Length=512
Score = 29.3 bits (64), Expect = 1.9, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 0/38 (0%)
Query 3 REALIGNIVDHLKHADRHLQERQVKLFYRADKDYGLRV 40
++ + N+ HL A ++ERQ +F R D + G R+
Sbjct 444 QDNFVKNVAGHLSGAISPVRERQYGVFTRVDSELGRRI 481
> CE20305
Length=1798
Score = 29.3 bits (64), Expect = 2.1, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query 2 DREALIGNIVDHLKHADR--HLQERQVKLF--YRADKDYGLRVARGLGLPDSACSSSR 55
DR A++ IV LK R H+ E V+L A + G VA LG+PD AC + R
Sbjct 1095 DRGAVLEAIVSRLKMITRRSHVTEEPVRLLGLSTALANAG-DVAEWLGIPDEACYNFR 1151
> YBL079w
Length=1502
Score = 27.7 bits (60), Expect = 6.2, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query 6 LIGNIVDHLKHADRHLQERQVKLFYRADKDYGL-RVARGLG 45
L G +DHL+H D + + +Y + DY R GLG
Sbjct 103 LAGKYIDHLQHKDSNTPVLDERSYYNSGVDYNFSREKNGLG 143
Lambda K H
0.322 0.139 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1194096762
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40