bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_7969_orf1
Length=60
Score E
Sequences producing significant alignments: (Bits) Value
At4g37040 48.5 3e-06
YLR244c 47.0 8e-06
Hs22044792 46.6 1e-05
At1g13270 46.6 1e-05
CE27601 46.2 1e-05
At2g45240 46.2 1e-05
SPBC3E7.10 42.7 1e-04
At3g25740 39.3 0.002
7301196 39.3 0.002
7297697 31.2 0.49
At1g08070 29.3 1.8
At2g29760 28.9 2.7
7302773 28.1 4.0
7290729 26.9 10.0
> At4g37040
Length=305
Score = 48.5 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 0/56 (0%)
Query 4 EVQKPAAIEGLRAAAAAAADALQLAVSSCKPGVTAEEIDSLVHKFLISKGAYPAAI 59
EV IE +RA+ AA A + KPGVT +EID VH +I GAYP+ +
Sbjct 61 EVHDKKGIECMRASGILAARVRDYAGTLVKPGVTTDEIDEAVHNMIIENGAYPSPL 116
> YLR244c
Length=387
Score = 47.0 bits (110), Expect = 8e-06, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 0/56 (0%)
Query 5 VQKPAAIEGLRAAAAAAADALQLAVSSCKPGVTAEEIDSLVHKFLISKGAYPAAIN 60
+ K I+ +R A + L +A + +PG+T +E+D +VH I +GAYP+ +N
Sbjct 129 IYKKDQIKKIRKACMLGREVLDIAAAHVRPGITTDELDEIVHNETIKRGAYPSPLN 184
Score = 27.3 bits (59), Expect = 7.9, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 0/25 (0%)
Query 23 DALQLAVSSCKPGVTAEEIDSLVHK 47
+ L+LA+ CKPG T +E+ + K
Sbjct 254 ECLKLAIKMCKPGTTFQELGDHIEK 278
> Hs22044792
Length=386
Score = 46.6 bits (109), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 0/50 (0%)
Query 11 IEGLRAAAAAAADALQLAVSSCKPGVTAEEIDSLVHKFLISKGAYPAAIN 60
IEG+R A + L +A KPGVT EEID VH I++ YP+ +N
Sbjct 136 IEGMRLVCRLAREVLDVAAGMIKPGVTTEEIDHAVHLACIARNCYPSPLN 185
> At1g13270
Length=369
Score = 46.6 bits (109), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 0/56 (0%)
Query 4 EVQKPAAIEGLRAAAAAAADALQLAVSSCKPGVTAEEIDSLVHKFLISKGAYPAAI 59
++ P I +RAA AA L A + KP VT EID VH +I GAYP+ +
Sbjct 125 QIPGPEGIAKMRAACELAARVLNYAGTLVKPSVTTNEIDKAVHDMIIEAGAYPSPL 180
> CE27601
Length=388
Score = 46.2 bits (108), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 0/48 (0%)
Query 12 EGLRAAAAAAADALQLAVSSCKPGVTAEEIDSLVHKFLISKGAYPAAI 59
EGL+ A + L A +C PGVT EEID +VH+ I + YP+ +
Sbjct 118 EGLKVACKLGRECLNEAAKACGPGVTTEEIDRVVHEAAIERDCYPSPL 165
> At2g45240
Length=398
Score = 46.2 bits (108), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 0/57 (0%)
Query 4 EVQKPAAIEGLRAAAAAAADALQLAVSSCKPGVTAEEIDSLVHKFLISKGAYPAAIN 60
E++ P I+ +R A + L A PGVT +EID +VH+ I+ G YP+ +N
Sbjct 140 EIKTPEQIQRMRETCKIAREVLDAAARVIHPGVTTDEIDRVVHEATIAAGGYPSPLN 196
> SPBC3E7.10
Length=379
Score = 42.7 bits (99), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 0/53 (0%)
Query 8 PAAIEGLRAAAAAAADALQLAVSSCKPGVTAEEIDSLVHKFLISKGAYPAAIN 60
P EG+R + L A ++ +PG T +E+DS+VH I + +P+ +N
Sbjct 122 PKEQEGMRKVCRLGREVLDAAAAAVRPGTTTDELDSIVHNACIERDCFPSTLN 174
> At3g25740
Length=344
Score = 39.3 bits (90), Expect = 0.002, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query 4 EVQKPAAIE--GLRAAAAAAADALQLAVSSCKPGVTAEEIDSLVHKFLISKGAYPAAI 59
E+Q P +I ++ A AA L A + +P VT +EID VH+ +I GAYP+ +
Sbjct 96 ELQIPDSIGIVKMKKACELAARVLDYAGTLVRPFVTTDEIDKAVHQMVIEFGAYPSPL 153
> 7301196
Length=374
Score = 39.3 bits (90), Expect = 0.002, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 0/50 (0%)
Query 11 IEGLRAAAAAAADALQLAVSSCKPGVTAEEIDSLVHKFLISKGAYPAAIN 60
IEG+R A + L + + G+T +E+D LVH+ I + YP+ +N
Sbjct 123 IEGMRVAGRLGRECLDEGAKAVEVGITTDELDRLVHEAAIERECYPSPLN 172
> 7297697
Length=307
Score = 31.2 bits (69), Expect = 0.49, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 0/56 (0%)
Query 4 EVQKPAAIEGLRAAAAAAADALQLAVSSCKPGVTAEEIDSLVHKFLISKGAYPAAI 59
E++ I+ +R + AA L+ G T ++ID+ H+ ++ AYP+ +
Sbjct 62 EIKSQVQIDAMRLSGRLAARILRECGKLATVGTTTDQIDAFAHERILESKAYPSPL 117
> At1g08070
Length=741
Score = 29.3 bits (64), Expect = 1.8, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 17/23 (73%), Gaps = 0/23 (0%)
Query 34 PGVTAEEIDSLVHKFLISKGAYP 56
PG ++ EIDS+VH+F+I +P
Sbjct 607 PGCSSIEIDSVVHEFIIGDKFHP 629
> At2g29760
Length=738
Score = 28.9 bits (63), Expect = 2.7, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 0/26 (0%)
Query 33 KPGVTAEEIDSLVHKFLISKGAYPAA 58
+PG ++ EID ++H+FL A+P +
Sbjct 602 EPGCSSIEIDGMIHEFLSGDNAHPMS 627
> 7302773
Length=191
Score = 28.1 bits (61), Expect = 4.0, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query 6 QKPAAIEGLRAAAAAAADALQLAVSSCKPGVTAEEI-DSLVHKFLISKGAYPAAIN 60
+ P A E L A A+ ++SSCKPG E + D+++ + S G P +N
Sbjct 15 EDPLAEERLGFVREVGAQAV-WSLSSCKPGFGVERLRDNIMDTYWQSDGQLPHLVN 69
> 7290729
Length=605
Score = 26.9 bits (58), Expect = 10.0, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 0/45 (0%)
Query 1 RHGEVQKPAAIEGLRAAAAAAADALQLAVSSCKPGVTAEEIDSLV 45
RHG +K A+ + ALQ+ + + GV EI+SLV
Sbjct 147 RHGTTKKSEAVLAYKEVIRECPMALQVIEALLELGVNGNEINSLV 191
Lambda K H
0.314 0.127 0.348
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1181901402
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40