bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_6726_orf2 Length=152 Score E Sequences producing significant alignments: (Bits) Value At3g26560 145 4e-35 Hs4826690 120 1e-27 7303231 98.6 4e-21 SPAC10F6.02c 92.8 2e-19 CE01889 82.8 2e-16 Hs19924145 33.9 0.13 At5g13010 31.2 0.77 7304289 29.6 2.1 YER013w 29.6 2.3 7300562 27.7 9.7 > At3g26560 Length=1168 Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 79/150 (52%), Positives = 112/150 (74%), Gaps = 2/150 (1%) Query 2 KLMSDYDKWEAQQLQRSGLVSSKENPYYDEEAGGIL-PAQEAEEDVEIEVVDEEPLFIRG 60 K MS ++WEA+QL SG++ E P YDE+ G+L + AEE++EIE+ ++EP F++G Sbjct 343 KKMSSPERWEAKQLIASGVLRVDEFPMYDEDGDGMLYQEEGAEEELEIEMNEDEPAFLQG 402 Query 61 QTTRAGMQLSPVKIVANPDGSLARAAATAQTLAKERRDVRQAQEAAILDSIPKDMSRPWE 120 QT R + +SPVKI NP+GSL+RAAA L KERR++R+ Q+ +LDSIPKD++RPWE Sbjct 403 QT-RYSVDMSPVKIFKNPEGSLSRAAALQSALTKERREMREQQQRTMLDSIPKDLNRPWE 461 Query 121 DPNPQPGERTIAQALQGLGQTGYEMPEWKR 150 DP P+ GER +AQ L+G+G + Y+MPEWK+ Sbjct 462 DPMPETGERHLAQELRGVGLSAYDMPEWKK 491 > Hs4826690 Length=1220 Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 71/149 (47%), Positives = 103/149 (69%), Gaps = 4/149 (2%) Query 4 MSDYDKWEAQQLQRSGLVSSKENPYYDEEAGGILP--AQEAEEDVEIEVVDEEPLFIRGQ 61 +SD +KWE +Q+ + ++S +E P +DEE G ILP E +ED+EIE+V+EEP F+RG Sbjct 394 ISDPEKWEIKQMIAANVLSKEEFPDFDEETG-ILPKVDDEEDEDLEIELVEEEPPFLRGH 452 Query 62 TTRAGMQLSPVKIVANPDGSLARAAATAQTLAKERRDVRQAQEAAILDSIPKDMSRPWED 121 T + M +SP+KIV NPDGSL++AA LAKERR+++QAQ A +DSIP +++ W D Sbjct 453 T-KQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVD 511 Query 122 PNPQPGERTIAQALQGLGQTGYEMPEWKR 150 P P R IA ++G+G ++PEWK+ Sbjct 512 PLPDAEGRQIAANMRGIGMMPNDIPEWKK 540 > 7303231 Length=1242 Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 62/148 (41%), Positives = 96/148 (64%), Gaps = 3/148 (2%) Query 4 MSDYDKWEAQQLQRSGLVSSKENPYYDEEAGGILPAQEAEE-DVEIEVVDEEPLFIRGQT 62 +S ++WE +Q+ SG++ E P +DEE G +LP E +E D+EIE+V+EEP F+ G Sbjct 416 ISSPERWEIKQMISSGVLDRSEMPDFDEETG-LLPKDEDDEADIEIEIVEEEPPFLSGHG 474 Query 63 TRAGMQLSPVKIVANPDGSLARAAATAQTLAKERRDVRQAQEAAILDSIPKDMSRPWEDP 122 RA LSPV+IV NPDGSLA+AA L+KERR+ + Q ++++P +++ W DP Sbjct 475 -RALHDLSPVRIVKNPDGSLAQAAMMQSALSKERREQKMLQREQEIEAMPTSLNKNWIDP 533 Query 123 NPQPGERTIAQALQGLGQTGYEMPEWKR 150 P+ R++A ++G+ E+PEWK+ Sbjct 534 LPEDESRSLAANMRGMAAAPPEVPEWKK 561 > SPAC10F6.02c Length=1168 Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 92/159 (57%), Gaps = 12/159 (7%) Query 1 RKLMSDYDKWEAQQLQRSGLVSSKENP-----YYDEEAGGILPAQEAEEDVEIEVVDEEP 55 RK ++ + WE QQL SG +S+ + P + A I P E +EDVEIE+ +EEP Sbjct 331 RKRLTSPEIWELQQLAASGAISATDIPELNDGFNTNNAAEINP--EDDEDVEIELREEEP 388 Query 56 LFIRGQTTRAGMQLSPVKIVANPDGSLARAAATAQTLAKERRDVRQ--AQEAAILDSIPK 113 F+ GQT + ++LSP+K+V PDGSL+RAA Q LA +RR++RQ A+ + + + Sbjct 389 GFLAGQT-KVSLKLSPIKVVKAPDGSLSRAAMQGQILANDRREIRQKEAKLKSEQEMEKQ 447 Query 114 DMSRPWEDPNPQPGERTIAQALQGLG--QTGYEMPEWKR 150 D+S W+D P +R AQ ++ Q E P W++ Sbjct 448 DLSLSWQDTMSNPQDRKFAQDVRDSAARQLTSETPSWRQ 486 > CE01889 Length=1200 Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/155 (36%), Positives = 92/155 (59%), Gaps = 10/155 (6%) Query 1 RKLMSDYDKWEAQQLQRSGLVSSKENPYYDEEAGGILPAQEAE---EDVEIEVVDEEPLF 57 R +S ++WE +Q+Q +G++++ + P +DEE G +L + E ED+EIE+V++EP F Sbjct 362 RVRISTPERWELRQMQGAGVLTATDMPDFDEEMG-VLRNYDDESDGEDIEIELVEDEPDF 420 Query 58 IRGQTTRAGMQLSPVKIVANPDGSLARAAATAQTLAKERRDVR-QAQEAAILDSIPKDMS 116 +RG + G ++ PVK+V NPDGSLA+AA L+KER++ + QAQ +D+ K S Sbjct 421 LRGYG-KGGAEIEPVKVVKNPDGSLAQAALMQGALSKERKETKIQAQRERDMDT-QKGFS 478 Query 117 RPWEDPNPQPGERTIAQAL---QGLGQTGYEMPEW 148 +P G ++ A + + EMPEW Sbjct 479 SNARILDPMSGNQSTAWSADESKDRNNKMKEMPEW 513 > Hs19924145 Length=830 Score = 33.9 bits (76), Expect = 0.13, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Query 57 FIRGQTTRAGMQLSPVK--IVANPDGSLARAAATAQTLAKERRDVRQAQEA 105 F++ + RAG+ L P K + A P L R + LA+E RDVR Q+A Sbjct 67 FLQEEVRRAGLVLPPPKGRLPAPPPRDLLRIQEETERLAQELRDVRGNQQA 117 > At5g13010 Length=1226 Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 11/105 (10%) Query 2 KLMSDYDKWEAQQLQRSGLVSSKE-NPYYDEEAGGILPAQEAEEDVEIEVVDEEPLFIRG 60 +L +D +WE +QL RSG V E +D E E + V D +P F+ G Sbjct 367 QLNADNAQWEDRQLLRSGAVRGTEVQTEFD---------SEEERKAILLVHDTKPPFLDG 417 Query 61 QTTRAGMQLSPVKIVANPDGSLARAAATAQTLAKERRDVRQAQEA 105 + Q PV V +P +A + L KE R+ + A ++ Sbjct 418 RVVYTK-QAEPVMPVKDPTSDMAIISRKGSGLVKEIREKQSANKS 461 > 7304289 Length=941 Score = 29.6 bits (65), Expect = 2.1, Method: Composition-based stats. Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 3/33 (9%) Query 102 AQEAAILDSIPKDMSRP---WEDPNPQPGERTI 131 AQ ++ S PKDMS+ WE+P+P P R+I Sbjct 296 AQPVSVGVSGPKDMSKQISGWEEPSPPPQRRSI 328 > YER013w Length=1145 Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust. Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 29/149 (19%) Query 1 RKLMSDYDKWEAQQLQRSGLVSSKENPYYDEEA-------------GGI----------- 36 R+ ++ ++WE +QL SG S + P +E G I Sbjct 288 RRALTSPERWEIRQLIASGAASIDDYPELKDEIPINTSYLTAKRDDGSIVNGNTEKVDSK 347 Query 37 LPAQEAEEDVEIEV---VDEEPLFIRGQTTRAGMQLSPVKIVANPDGSLARAAATAQTLA 93 L Q+ +E EI+V D+ P F++ Q + + KI P G + R+A Sbjct 348 LEEQQRDETDEIDVELNTDDGPKFLKDQQVKGAKKYEMPKITKVPRGFMNRSAINGSNAI 407 Query 94 KERRDVRQAQEAAILDSIPKDMSRPWEDP 122 ++ R+ + ++ I I K S ++DP Sbjct 408 RDHREEKLRKKREIEQQIRKQQS--FDDP 434 > 7300562 Length=324 Score = 27.7 bits (60), Expect = 9.7, Method: Compositional matrix adjust. Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 16/103 (15%) Query 11 EAQQLQRSG-----LVSS-----KENPYYDEEAGGILPAQEAEEDV--EIEVVDEEPLFI 58 E+++L+RS L+SS EN + + G++ +++ ED +I+ V +P++ Sbjct 119 ESKKLKRSKGVQKLLLSSAKNLKNENVKHQKLKNGVVKSEQETEDSKEQIQPVKVQPVY- 177 Query 59 RGQTTRAGMQLSPVKIVANPDGSLARAAATAQTLAKERRDVRQ 101 A + S V ANP G ++ + + K+ RD ++ Sbjct 178 ---NQEAKIVYSKVDFAANPGGKAKKSHQNPKEILKKLRDTKK 217 Lambda K H 0.310 0.129 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1925034518 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40